BLASTX nr result
ID: Forsythia22_contig00009566
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Forsythia22_contig00009566
(1351 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|YP_009110592.1| RNA polymerase beta'' chain (chloroplast) [H... 83 4e-13
ref|YP_003359349.2| RNA polymerase beta II subunit (chloroplast)... 83 4e-13
ref|YP_004563771.1| RNA polymerase beta'' chain [Olea europaea s... 83 4e-13
ref|YP_004563994.1| RNA polymerase beta'' chain [Olea woodiana s... 83 4e-13
emb|CBR30396.1| RNA polymerase beta'' chain [Olea europaea subsp... 83 4e-13
ref|YP_004376411.1| RNA polymerase beta'' chain [Olea europaea s... 83 4e-13
gb|ADD72079.1| RNA polymerase beta' subunit [Olea europaea] gi|3... 83 4e-13
emb|CAP62488.1| RNA polymerase beta' subunit-2 [Ceratophyllum de... 83 4e-13
ref|YP_001542437.1| RNA polymerase beta'' subunit [Ceratophyllum... 83 4e-13
gb|ABD93831.1| RNA polymerase beta chain, partial (chloroplast) ... 83 4e-13
gb|ABD93832.1| RNA polymerase beta chain, partial (chloroplast) ... 83 4e-13
gb|ABD93852.1| RNA polymerase beta chain, partial (chloroplast) ... 82 7e-13
gb|ADX99108.1| RNA polymerase beta II subunit [Acantholippia sal... 82 9e-13
ref|YP_009139669.1| RNA polymerase beta' subunit (chloroplast) [... 82 1e-12
ref|YP_009127351.1| RNA polymerase beta' subunit (chloroplast) [... 82 1e-12
ref|YP_009127268.1| RNA polymerase beta' subunit (chloroplast) [... 82 1e-12
ref|YP_009127184.1| RNA polymerase beta' subunit (chloroplast) [... 82 1e-12
ref|YP_009110326.1| RNA polymerase beta' subunit (chloroplast) [... 82 1e-12
gb|AHE41667.1| RNA polymerase beta' subunit, partial (chloroplas... 82 1e-12
gb|AHE41666.1| RNA polymerase beta' subunit, partial (chloroplas... 82 1e-12
>ref|YP_009110592.1| RNA polymerase beta'' chain (chloroplast) [Hesperelaea palmeri]
gi|725798276|emb|CED79752.1| RNA polymerase beta'' chain
(chloroplast) [Hesperelaea palmeri]
Length = 1394
Score = 83.2 bits (204), Expect = 4e-13
Identities = 42/50 (84%), Positives = 44/50 (88%)
Frame = -1
Query: 271 INSISMNLEKSVEGWNERITRILGMLWGFLIGAELTIVQRCMPSVNKIQK 122
I+SISMNLEK VEGWNERITRILGM WGFLIGAELTIVQ + VNKIQK
Sbjct: 1164 IDSISMNLEKRVEGWNERITRILGMPWGFLIGAELTIVQSRISLVNKIQK 1213
>ref|YP_003359349.2| RNA polymerase beta II subunit (chloroplast) [Olea europaea]
gi|363413081|gb|ADA69916.2| RNA polymerase beta II
subunit (chloroplast) [Olea europaea]
Length = 1390
Score = 83.2 bits (204), Expect = 4e-13
Identities = 42/50 (84%), Positives = 44/50 (88%)
Frame = -1
Query: 271 INSISMNLEKSVEGWNERITRILGMLWGFLIGAELTIVQRCMPSVNKIQK 122
I+SISMNLEK VEGWNERITRILGM WGFLIGAELTIVQ + VNKIQK
Sbjct: 1160 IDSISMNLEKRVEGWNERITRILGMPWGFLIGAELTIVQSRISLVNKIQK 1209
>ref|YP_004563771.1| RNA polymerase beta'' chain [Olea europaea subsp. cuspidata]
gi|334084940|emb|CBJ04288.1| RNA polymerase beta'' chain
[Olea europaea subsp. cuspidata]
Length = 1394
Score = 83.2 bits (204), Expect = 4e-13
Identities = 42/50 (84%), Positives = 44/50 (88%)
Frame = -1
Query: 271 INSISMNLEKSVEGWNERITRILGMLWGFLIGAELTIVQRCMPSVNKIQK 122
I+SISMNLEK VEGWNERITRILGM WGFLIGAELTIVQ + VNKIQK
Sbjct: 1164 IDSISMNLEKRVEGWNERITRILGMPWGFLIGAELTIVQSRISLVNKIQK 1213
>ref|YP_004563994.1| RNA polymerase beta'' chain [Olea woodiana subsp. woodiana]
gi|334084649|emb|CBS29340.1| RNA polymerase beta'' chain
[Olea woodiana subsp. woodiana]
Length = 1394
Score = 83.2 bits (204), Expect = 4e-13
Identities = 42/50 (84%), Positives = 44/50 (88%)
Frame = -1
Query: 271 INSISMNLEKSVEGWNERITRILGMLWGFLIGAELTIVQRCMPSVNKIQK 122
I+SISMNLEK VEGWNERITRILGM WGFLIGAELTIVQ + VNKIQK
Sbjct: 1164 IDSISMNLEKRVEGWNERITRILGMPWGFLIGAELTIVQSRISLVNKIQK 1213
>emb|CBR30396.1| RNA polymerase beta'' chain [Olea europaea subsp. europaea]
Length = 1394
Score = 83.2 bits (204), Expect = 4e-13
Identities = 42/50 (84%), Positives = 44/50 (88%)
Frame = -1
Query: 271 INSISMNLEKSVEGWNERITRILGMLWGFLIGAELTIVQRCMPSVNKIQK 122
I+SISMNLEK VEGWNERITRILGM WGFLIGAELTIVQ + VNKIQK
Sbjct: 1164 IDSISMNLEKRVEGWNERITRILGMPWGFLIGAELTIVQSRISLVNKIQK 1213
>ref|YP_004376411.1| RNA polymerase beta'' chain [Olea europaea subsp. europaea]
gi|334701878|ref|YP_004564487.1| RNA polymerase beta''
chain [Olea europaea subsp. maroccana]
gi|328795423|emb|CBR30304.1| RNA polymerase beta'' chain
[Olea europaea subsp. europaea]
gi|334084391|emb|CBR23819.1| RNA polymerase beta'' chain
[Olea europaea subsp. cuspidata]
gi|334084854|emb|CBS29226.1| RNA polymerase beta'' chain
[Olea europaea subsp. maroccana]
gi|334085026|emb|CBR23728.1| RNA polymerase beta'' chain
[Olea europaea subsp. cuspidata]
Length = 1394
Score = 83.2 bits (204), Expect = 4e-13
Identities = 42/50 (84%), Positives = 44/50 (88%)
Frame = -1
Query: 271 INSISMNLEKSVEGWNERITRILGMLWGFLIGAELTIVQRCMPSVNKIQK 122
I+SISMNLEK VEGWNERITRILGM WGFLIGAELTIVQ + VNKIQK
Sbjct: 1164 IDSISMNLEKRVEGWNERITRILGMPWGFLIGAELTIVQSRISLVNKIQK 1213
>gb|ADD72079.1| RNA polymerase beta' subunit [Olea europaea]
gi|334084477|emb|CBR24610.1| RNA polymerase beta'' chain
[Olea europaea subsp. europaea]
gi|510934394|emb|CCQ09092.1| RNA polymerase beta'' chain
(chloroplast) [Olea europaea subsp. europaea]
Length = 1394
Score = 83.2 bits (204), Expect = 4e-13
Identities = 42/50 (84%), Positives = 44/50 (88%)
Frame = -1
Query: 271 INSISMNLEKSVEGWNERITRILGMLWGFLIGAELTIVQRCMPSVNKIQK 122
I+SISMNLEK VEGWNERITRILGM WGFLIGAELTIVQ + VNKIQK
Sbjct: 1164 IDSISMNLEKRVEGWNERITRILGMPWGFLIGAELTIVQSRISLVNKIQK 1213
>emb|CAP62488.1| RNA polymerase beta' subunit-2 [Ceratophyllum demersum]
Length = 1390
Score = 83.2 bits (204), Expect = 4e-13
Identities = 39/50 (78%), Positives = 44/50 (88%)
Frame = -1
Query: 271 INSISMNLEKSVEGWNERITRILGMLWGFLIGAELTIVQRCMPSVNKIQK 122
I+SIS+NLEK VEGWNER+TRILG+ WGFLIGAELTI Q C+ VNKIQK
Sbjct: 1156 IDSISLNLEKRVEGWNERVTRILGIPWGFLIGAELTIAQSCISLVNKIQK 1205
>ref|YP_001542437.1| RNA polymerase beta'' subunit [Ceratophyllum demersum]
gi|212277669|sp|A8SE78.1|RPOC2_CERDE RecName:
Full=DNA-directed RNA polymerase subunit beta''; AltName:
Full=PEP; AltName: Full=Plastid-encoded RNA polymerase
subunit beta''; Short=RNA polymerase subunit beta''
(chloroplast) [Ceratophyllum demersum]
gi|148508433|gb|ABQ81440.1| RNA polymerase beta'' subunit
[Ceratophyllum demersum]
Length = 1390
Score = 83.2 bits (204), Expect = 4e-13
Identities = 39/50 (78%), Positives = 44/50 (88%)
Frame = -1
Query: 271 INSISMNLEKSVEGWNERITRILGMLWGFLIGAELTIVQRCMPSVNKIQK 122
I+SIS+NLEK VEGWNER+TRILG+ WGFLIGAELTI Q C+ VNKIQK
Sbjct: 1156 IDSISLNLEKRVEGWNERVTRILGIPWGFLIGAELTIAQSCISLVNKIQK 1205
>gb|ABD93831.1| RNA polymerase beta chain, partial (chloroplast) [Ceratophyllum
demersum]
Length = 791
Score = 83.2 bits (204), Expect = 4e-13
Identities = 39/50 (78%), Positives = 44/50 (88%)
Frame = -1
Query: 271 INSISMNLEKSVEGWNERITRILGMLWGFLIGAELTIVQRCMPSVNKIQK 122
I+SIS+NLEK VEGWNER+TRILG+ WGFLIGAELTI Q C+ VNKIQK
Sbjct: 636 IDSISLNLEKRVEGWNERVTRILGIPWGFLIGAELTIAQSCISLVNKIQK 685
>gb|ABD93832.1| RNA polymerase beta chain, partial (chloroplast) [Ceratophyllum
submersum]
Length = 806
Score = 83.2 bits (204), Expect = 4e-13
Identities = 39/50 (78%), Positives = 44/50 (88%)
Frame = -1
Query: 271 INSISMNLEKSVEGWNERITRILGMLWGFLIGAELTIVQRCMPSVNKIQK 122
I+SIS+NLEK VEGWNER+TRILG+ WGFLIGAELTI Q C+ VNKIQK
Sbjct: 651 IDSISLNLEKRVEGWNERVTRILGIPWGFLIGAELTIAQSCISLVNKIQK 700
>gb|ABD93852.1| RNA polymerase beta chain, partial (chloroplast) [Degeneria
vitiensis]
Length = 765
Score = 82.4 bits (202), Expect = 7e-13
Identities = 40/50 (80%), Positives = 44/50 (88%)
Frame = -1
Query: 271 INSISMNLEKSVEGWNERITRILGMLWGFLIGAELTIVQRCMPSVNKIQK 122
I+SISMNLEK +EGWNERITRILG+LWGFLIGAELTI Q + VNKIQK
Sbjct: 651 IDSISMNLEKRIEGWNERITRILGILWGFLIGAELTIAQSRISLVNKIQK 700
>gb|ADX99108.1| RNA polymerase beta II subunit [Acantholippia salsoloides]
Length = 701
Score = 82.0 bits (201), Expect = 9e-13
Identities = 41/50 (82%), Positives = 44/50 (88%)
Frame = -1
Query: 271 INSISMNLEKSVEGWNERITRILGMLWGFLIGAELTIVQRCMPSVNKIQK 122
I+SISMNLEK V+GWNERITRILGM WGFLIGAELTIVQ + VNKIQK
Sbjct: 512 IDSISMNLEKRVDGWNERITRILGMPWGFLIGAELTIVQSRISLVNKIQK 561
>ref|YP_009139669.1| RNA polymerase beta' subunit (chloroplast) [Morus notabilis]
gi|818638148|gb|AKF34031.1| RNA polymerase beta' subunit
(chloroplast) [Morus notabilis]
Length = 1389
Score = 81.6 bits (200), Expect = 1e-12
Identities = 41/50 (82%), Positives = 44/50 (88%)
Frame = -1
Query: 271 INSISMNLEKSVEGWNERITRILGMLWGFLIGAELTIVQRCMPSVNKIQK 122
I+SISMNLEK VEGWNERITRILG+ WGFLIGAELTIVQ + VNKIQK
Sbjct: 1159 IDSISMNLEKRVEGWNERITRILGIPWGFLIGAELTIVQSRISLVNKIQK 1208
>ref|YP_009127351.1| RNA polymerase beta' subunit (chloroplast) [Haematoxylum brasiletto]
Length = 1391
Score = 81.6 bits (200), Expect = 1e-12
Identities = 41/50 (82%), Positives = 44/50 (88%)
Frame = -1
Query: 271 INSISMNLEKSVEGWNERITRILGMLWGFLIGAELTIVQRCMPSVNKIQK 122
I+SISMNLEK VEGWNERITRILG+ WGFLIGAELTIVQ + VNKIQK
Sbjct: 1161 IDSISMNLEKRVEGWNERITRILGIPWGFLIGAELTIVQSRISLVNKIQK 1210
>ref|YP_009127268.1| RNA polymerase beta' subunit (chloroplast) [Ceratonia siliqua]
Length = 1377
Score = 81.6 bits (200), Expect = 1e-12
Identities = 41/50 (82%), Positives = 44/50 (88%)
Frame = -1
Query: 271 INSISMNLEKSVEGWNERITRILGMLWGFLIGAELTIVQRCMPSVNKIQK 122
I+SISMNLEK VEGWNERITRILG+ WGFLIGAELTIVQ + VNKIQK
Sbjct: 1161 IDSISMNLEKRVEGWNERITRILGIPWGFLIGAELTIVQSRISLVNKIQK 1210
>ref|YP_009127184.1| RNA polymerase beta' subunit (chloroplast) [Libidibia coriaria]
Length = 1397
Score = 81.6 bits (200), Expect = 1e-12
Identities = 41/50 (82%), Positives = 44/50 (88%)
Frame = -1
Query: 271 INSISMNLEKSVEGWNERITRILGMLWGFLIGAELTIVQRCMPSVNKIQK 122
I+SISMNLEK VEGWNERITRILG+ WGFLIGAELTIVQ + VNKIQK
Sbjct: 1165 IDSISMNLEKRVEGWNERITRILGIPWGFLIGAELTIVQSRISLVNKIQK 1214
>ref|YP_009110326.1| RNA polymerase beta' subunit (chloroplast) [Morus mongolica]
gi|723005667|gb|AIX11652.1| RNA polymerase beta' subunit
(chloroplast) [Morus mongolica]
Length = 1385
Score = 81.6 bits (200), Expect = 1e-12
Identities = 41/50 (82%), Positives = 44/50 (88%)
Frame = -1
Query: 271 INSISMNLEKSVEGWNERITRILGMLWGFLIGAELTIVQRCMPSVNKIQK 122
I+SISMNLEK VEGWNERITRILG+ WGFLIGAELTIVQ + VNKIQK
Sbjct: 1155 IDSISMNLEKRVEGWNERITRILGIPWGFLIGAELTIVQSRISLVNKIQK 1204
>gb|AHE41667.1| RNA polymerase beta' subunit, partial (chloroplast) [Ribes
fasciculatum var. chinense]
Length = 1365
Score = 81.6 bits (200), Expect = 1e-12
Identities = 41/50 (82%), Positives = 44/50 (88%)
Frame = -1
Query: 271 INSISMNLEKSVEGWNERITRILGMLWGFLIGAELTIVQRCMPSVNKIQK 122
I+SISMNLEK VEGWNERITRILG+ WGFLIGAELTIVQ + VNKIQK
Sbjct: 1140 IDSISMNLEKRVEGWNERITRILGIPWGFLIGAELTIVQSRISLVNKIQK 1189
>gb|AHE41666.1| RNA polymerase beta' subunit, partial (chloroplast) [Rhodoleia
championii]
Length = 1375
Score = 81.6 bits (200), Expect = 1e-12
Identities = 41/50 (82%), Positives = 44/50 (88%)
Frame = -1
Query: 271 INSISMNLEKSVEGWNERITRILGMLWGFLIGAELTIVQRCMPSVNKIQK 122
I+SISMNLEK VEGWNERITRILG+ WGFLIGAELTIVQ + VNKIQK
Sbjct: 1145 IDSISMNLEKRVEGWNERITRILGIPWGFLIGAELTIVQSRISLVNKIQK 1194