BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Forsythia22_contig00009334
         (2463 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011078273.1| PREDICTED: LOW QUALITY PROTEIN: CRS2-associa...   733   0.0  
emb|CDP03283.1| unnamed protein product [Coffea canephora]            674   0.0  
ref|XP_009610480.1| PREDICTED: CRS2-associated factor 1, chlorop...   667   0.0  
ref|XP_004239268.1| PREDICTED: CRS2-associated factor 1, chlorop...   665   0.0  
ref|XP_009796721.1| PREDICTED: CRS2-associated factor 1, chlorop...   664   0.0  
ref|XP_009796720.1| PREDICTED: CRS2-associated factor 1, chlorop...   660   0.0  
ref|XP_006338151.1| PREDICTED: CRS2-associated factor 1, chlorop...   656   0.0  
ref|XP_012845493.1| PREDICTED: CRS2-associated factor 1, chlorop...   654   0.0  
ref|XP_010687587.1| PREDICTED: CRS2-associated factor 1, chlorop...   567   0.0  
ref|XP_010060935.1| PREDICTED: CRS2-associated factor 1, chlorop...   565   e-177
gb|KJB64997.1| hypothetical protein B456_010G075200 [Gossypium r...   554   e-175
ref|XP_010263189.1| PREDICTED: CRS2-associated factor 1, chlorop...   623   e-175
ref|XP_002535109.1| conserved hypothetical protein [Ricinus comm...   560   e-173
emb|CBI28022.3| unnamed protein product [Vitis vinifera]              597   e-167
ref|XP_002280611.1| PREDICTED: CRS2-associated factor 1, chlorop...   597   e-167
ref|XP_008242551.1| PREDICTED: CRS2-associated factor 1, chlorop...   592   e-166
ref|XP_007203785.1| hypothetical protein PRUPE_ppa001872mg [Prun...   592   e-166
ref|XP_010095379.1| CRS2-associated factor 1 [Morus notabilis] g...   589   e-165
ref|XP_009352524.1| PREDICTED: CRS2-associated factor 1, chlorop...   580   e-162
gb|KDO66499.1| hypothetical protein CISIN_1g003220mg [Citrus sin...   579   e-162

>ref|XP_011078273.1| PREDICTED: LOW QUALITY PROTEIN: CRS2-associated factor 1,
            chloroplastic [Sesamum indicum]
          Length = 749

 Score =  733 bits (1893), Expect = 0.0
 Identities = 375/579 (64%), Positives = 437/579 (75%), Gaps = 4/579 (0%)
 Frame = -1

Query: 2343 MSLKTVIQFPIFAPPD-HHRCRRPATEVRFSRWNNANAEKFIRHERAQKELEDELRFEKR 2167
            M+L+T  QFP+FAPP    + +RP TE+RFSRWNNANA+KFIRHER QKELED++RFEKR
Sbjct: 1    MALQT--QFPVFAPPHLRPQPQRPTTEIRFSRWNNANAQKFIRHERTQKELEDQIRFEKR 58

Query: 2166 FDSAHNIAHNYNPAPPHRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLHPAFKP 1987
            FDSA  IAHNYNPAPPH                                   +LHPAFKP
Sbjct: 59   FDSALTIAHNYNPAPPHPTTFKSTGTPSAPSSPSIPGKASKYSKSPKHPSRDALHPAFKP 118

Query: 1986 LLKPRKFPVKNPETVSGENENKHYVSPNFRIGENGVSYEFPEAPFEYQYSYTETXXXXXX 1807
              K RK P+        ENE+++ V PNFRI ENGVSYE PEAPF YQYSYTET      
Sbjct: 119  FSKSRKIPLN-------ENESQNLVGPNFRIDENGVSYEIPEAPFVYQYSYTETPKVKPV 171

Query: 1806 XXXXXLVSPFGPGSIPKPWLGRXXXXXXXXXXPEFDSFQLPPPHKKGVKPVQAPGPFLRG 1627
                 LVSPFGPG++ KPWLGR          PEFDSFQLPPPHKKGVKPVQAPGPFL G
Sbjct: 172  KLREPLVSPFGPGTMAKPWLGRSPLPPSKKKLPEFDSFQLPPPHKKGVKPVQAPGPFLPG 231

Query: 1626 SGPKYMKSREEILGEPLTKEEVNELIEGCKKSQRQLNMGRDGLTHNMLDNIHAHWKRRRV 1447
            SGPKY++SREE+LG PL KEE+ ELIEGCKKS+RQLNMGRDGLTHNMLDNIHAHWKRRRV
Sbjct: 232  SGPKYVRSREEVLGAPLIKEEIVELIEGCKKSKRQLNMGRDGLTHNMLDNIHAHWKRRRV 291

Query: 1446 CKIKCKGVCTVDMDNVRQQLEEKTGGKVIYNRGGVIYLFRGRNYNFKTRPRFPLMLWKPI 1267
             KIKCKGVCTVDMDNV QQLEEKTGGK+IY RGGV+YLFRGRNYN+K RPRFPLMLWKP+
Sbjct: 292  IKIKCKGVCTVDMDNVCQQLEEKTGGKIIYRRGGVVYLFRGRNYNYKFRPRFPLMLWKPV 351

Query: 1266 TPVYPRLIKRVPEGLTLEEASEMRKQGRNLTPICKLAKNGVYSDLVNNIREAFEACELVR 1087
             PVYPRLI+RVPEGLTLEEASEMRK+G +L PICKLAKNGVY DLV N+REAFEACELVR
Sbjct: 352  APVYPRLIQRVPEGLTLEEASEMRKKGHDLIPICKLAKNGVYCDLVKNVREAFEACELVR 411

Query: 1086 INCQGLNGSDYRKVGAKLKDLVPCVLISFEYEHILIWRGRYWRSSLPELEDGPKEVQEVK 907
            INCQGLN SDY+K+GAKLKDL+PCVL+SFE EHILIWRGR W+SSL E ++ PK +QEVK
Sbjct: 412  INCQGLNASDYKKIGAKLKDLIPCVLLSFECEHILIWRGRDWKSSLVETDESPKGLQEVK 471

Query: 906  FDSVALAKPVVSALSSSVPTVSI--VNPNDLNTSVSSTCGNVESKRISEFSEAGVEDLLS 733
             D V   K ++++ S SV ++++  VN ++L TS+  TC N ES   +E  E GVED++S
Sbjct: 472  ADDV--DKELLASSSPSVQSLALMDVNSSNLGTSLYPTCSN-ESHGNTELDEVGVEDIVS 528

Query: 732  TV-NMSSEASEAVLTVQSINGTERSPVHAGYSGDDSEAF 619
             V ++S  AS  VLT ++++G+  SPV   ++ ++SE F
Sbjct: 529  EVTDVSVTASHVVLTAETVDGSGESPVSRVFTVNNSETF 567



 Score =  134 bits (338), Expect = 3e-28
 Identities = 72/127 (56%), Positives = 87/127 (68%)
 Frame = -2

Query: 557 ELVSLSPPWTEGVLLLLKQAVECGRAILLDDHCLDADNVFKMTVAFAKTVPTGPVFRHGP 378
           ELVSL+ PWTEG+LLL KQAVE G A++LDDH LDAD VFK  VAFAK+ P GPVF H P
Sbjct: 618 ELVSLNTPWTEGILLLRKQAVESGMALVLDDHSLDADIVFKKAVAFAKSAPDGPVFNHRP 677

Query: 377 KKKAVQRGEKKETNDLELKEAAAVAGTEITVPGXXXXXXXXXXXXXXKDIKADYLNVAPQ 198
           K+  +Q+  ++  +D   +EA+AV G EITV G              KD+K DYLNV PQ
Sbjct: 678 KQLVIQKNNEQGCDDSVPEEASAVLGAEITVSG-RRDDKKISRKGNIKDMKTDYLNVVPQ 736

Query: 197 GSLRVDE 177
           G+LRVDE
Sbjct: 737 GNLRVDE 743


>emb|CDP03283.1| unnamed protein product [Coffea canephora]
          Length = 776

 Score =  674 bits (1738), Expect = 0.0
 Identities = 348/564 (61%), Positives = 404/564 (71%), Gaps = 16/564 (2%)
 Frame = -1

Query: 2343 MSLKTVIQFPIFAPPDHHRCR-RPATEVRFSRWNNANAEKFIRHERAQKELEDELRFEKR 2167
            M+L+ VIQFP+F PP       RPA EVRFSRWNNANA+KFIR ER QKE+ED++R ++R
Sbjct: 1    MALRPVIQFPVFVPPPPSPPNHRPAFEVRFSRWNNANAQKFIRRERTQKEIEDQIRSQRR 60

Query: 2166 FDSAHNIAHNYNPAPPHRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLHPAFKP 1987
            FDSA NIAHNYNPAPP                                      HPAFKP
Sbjct: 61   FDSAFNIAHNYNPAPPTPTFKSTGTPSSPSHPSIPGKKSKYSKNPQKPRLPFD-HPAFKP 119

Query: 1986 LLKPRKFPVK--NPETVSGEN---ENKHYVSPNFRIGENGVSYEFPEAPFEYQYSYTETX 1822
            +LK +K PVK  NP   + E+   E +   +PN +I E G+SYEFPEAPF YQYSYTET 
Sbjct: 120  VLKHKKIPVKRINPSRTTDESTKAEEQENFAPNVKIDEKGLSYEFPEAPFLYQYSYTETP 179

Query: 1821 XXXXXXXXXXLVSPFGPGSIPKPWLGRXXXXXXXXXXPEFDSFQLPPPHKKGVKPVQAPG 1642
                      LV+PF PG++ +PW GR          PEFDSFQLPPPHKKGVKPVQAPG
Sbjct: 180  KVKPVGIREPLVAPFEPGTMGRPWTGRKPLPPSKKKLPEFDSFQLPPPHKKGVKPVQAPG 239

Query: 1641 PFLRGSGPKYMKSREEILGEPLTKEEVNELIEGCKKSQRQLNMGRDGLTHNMLDNIHAHW 1462
            PFL G+GP Y+KSRE+ILGEPLTKEE+  L+E CKK +RQLNMGRDG THNMLDNIHAHW
Sbjct: 240  PFLPGTGPMYVKSREQILGEPLTKEEIKALVESCKKWKRQLNMGRDGFTHNMLDNIHAHW 299

Query: 1461 KRRRVCKIKCKGVCTVDMDNVRQQLEEKTGGKVIYNRGGVIYLFRGRNYNFKTRPRFPLM 1282
            KRRRVCKIKCKGVCTVDM+NVRQQLEEKTGG+VIY+RGGVIYLFRGRNYN+KTRPRFPLM
Sbjct: 300  KRRRVCKIKCKGVCTVDMENVRQQLEEKTGGQVIYSRGGVIYLFRGRNYNYKTRPRFPLM 359

Query: 1281 LWKPITPVYPRLIKRVPEGLTLEEASEMRKQGRNLTPICKLAKNGVYSDLVNNIREAFEA 1102
            LWKP+TPVYPRL+KR PEGLTLEEA+EMRK+GRNL PICKLAKNGVY DLV N+REAFEA
Sbjct: 360  LWKPVTPVYPRLVKRAPEGLTLEEATEMRKKGRNLVPICKLAKNGVYCDLVKNVREAFEA 419

Query: 1101 CELVRINCQGLNGSDYRKVGAKLKDLVPCVLISFEYEHILIWRGRYWRSSLPELEDGPKE 922
            CELVRINC+G+NGSDYRK+GAKLKDLVPCVLISFE EHIL+WRG+ W+SSLPEL    + 
Sbjct: 420  CELVRINCEGVNGSDYRKIGAKLKDLVPCVLISFENEHILMWRGQDWKSSLPELRSDAEG 479

Query: 921  VQEVKFDSVALAKPV-------VSALSSSVPTVSIVNP--NDLNTSVSS-TCGNVESKRI 772
            + E + D+      +       ++A +SSV   + +N    DLNTS  S     VES   
Sbjct: 480  MTETESDATTFVGTILEGEAESLTASASSVSNTTKMNTTIKDLNTSSGSWNFEEVESDGS 539

Query: 771  SEFSEAGVEDLLSTVNMSSEASEA 700
            SE+ E  V DL +    + E  E+
Sbjct: 540  SEYGEEVVGDLTALATSACETYES 563



 Score =  105 bits (261), Expect = 2e-19
 Identities = 60/127 (47%), Positives = 77/127 (60%)
 Frame = -2

Query: 557  ELVSLSPPWTEGVLLLLKQAVECGRAILLDDHCLDADNVFKMTVAFAKTVPTGPVFRHGP 378
            EL S + P  E VLLLL+QAVE G A++L+D  LDAD V++  VA AK+ P GPVF H  
Sbjct: 644  ELSSATTPSAEEVLLLLRQAVESGLAVMLEDSSLDADIVYERAVALAKSAPPGPVFSHRR 703

Query: 377  KKKAVQRGEKKETNDLELKEAAAVAGTEITVPGXXXXXXXXXXXXXXKDIKADYLNVAPQ 198
            K+  V   +K +++DLE+KEA  V   E+T+                KDI+ DYLNV   
Sbjct: 704  KQLVVPECDKPQSDDLEVKEALKVPEKEVTLSSKRGSGKKTSKGRSMKDIREDYLNVNQP 763

Query: 197  GSLRVDE 177
            GSLRVDE
Sbjct: 764  GSLRVDE 770


>ref|XP_009610480.1| PREDICTED: CRS2-associated factor 1, chloroplastic [Nicotiana
            tomentosiformis]
          Length = 773

 Score =  667 bits (1721), Expect = 0.0
 Identities = 348/581 (59%), Positives = 412/581 (70%), Gaps = 9/581 (1%)
 Frame = -1

Query: 2343 MSLKTVIQFPIFAPPDHHRCRRPATEVRFSRWNNANAEKFIRHERAQKELEDELRFEKRF 2164
            M  +T+IQFPIF+PP      RPATEVRFSRWNNANAEKFIRHER QKE+EDE+RF KRF
Sbjct: 1    MGSRTLIQFPIFSPPAPPHNHRPATEVRFSRWNNANAEKFIRHERTQKEIEDEIRFHKRF 60

Query: 2163 DSAHNIAHNYNPAPPHRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLHPAFKPL 1984
            DSA NIA+NYNPAPP                                    + HPAFKP 
Sbjct: 61   DSALNIANNYNPAPPTPITEKKTFKSIGTPSSPSSPSIPGKKSKYSRNFQKNTHPAFKPF 120

Query: 1983 LKPRKFPVKNPETVSGENENKHYVSPNFRIGENGVSYEFPEAPFEYQYSYTETXXXXXXX 1804
            ++PR  P       SGE   K  +  + ++ ENGV YEFPEAPF YQYSYTET       
Sbjct: 121  VRPRNIPKD-----SGETTEKSAI--DIKVDENGVCYEFPEAPFVYQYSYTETPKLKPNK 173

Query: 1803 XXXXLVSPFGPGSIPKPWLGRXXXXXXXXXXPEFDSFQLPPPHKKGVKPVQAPGPFLRGS 1624
                LVSPFGP S+ +PW GR          PEFDSF+LPPPHKKGVKPVQAPGPFL GS
Sbjct: 174  LREPLVSPFGPESMRRPWTGRKPLPPSKKNLPEFDSFKLPPPHKKGVKPVQAPGPFLEGS 233

Query: 1623 GPKYMKSREEILGEPLTKEEVNELIEGCKKSQRQLNMGRDGLTHNMLDNIHAHWKRRRVC 1444
            GPKY++SREE+LGEPLTKEE+ +LI+ CKK+ RQLN+GRDGLTHNML+NIHAHWKR+RVC
Sbjct: 234  GPKYVRSREEVLGEPLTKEEMMQLIDSCKKTTRQLNIGRDGLTHNMLENIHAHWKRKRVC 293

Query: 1443 KIKCKGVCTVDMDNVRQQLEEKTGGKVIYNRGGVIYLFRGRNYNFKTRPRFPLMLWKPIT 1264
            KIKCKGVCTVDMDNV  +LEEKTGGK+IY++GG+IYLFRGRNYN+KTRP FPLMLW+P+T
Sbjct: 294  KIKCKGVCTVDMDNVCDKLEEKTGGKIIYHKGGLIYLFRGRNYNYKTRPHFPLMLWRPVT 353

Query: 1263 PVYPRLIKRVPEGLTLEEASEMRKQGRNLTPICKLAKNGVYSDLVNNIREAFEACELVRI 1084
            PVYPRL++RVPEGLTLEEA+EMRK+GRNL PICKL KNGVY DL  NIREAFEACELVRI
Sbjct: 354  PVYPRLVRRVPEGLTLEEATEMRKKGRNLIPICKLGKNGVYCDLAKNIREAFEACELVRI 413

Query: 1083 NCQGLNGSDYRKVGAKLKDLVPCVLISFEYEHILIWRGRYWRSSLPELEDGPKEVQEVKF 904
            NCQG+N SDYRK+GAKLKDLVPCVLISFE EHIL+WRGR W SSLP+ ++ P+  +  K 
Sbjct: 414  NCQGMNPSDYRKIGAKLKDLVPCVLISFEQEHILMWRGRDWVSSLPDDKEKPQRRKGSKA 473

Query: 903  DSVALA------KPVVSALSSSVPTVSIVNPNDLNTSVSSTC-GNVESKRISEFSEAGVE 745
            D+ A +      + V S   S    ++ +NP +L+ SVS     + E  R +   E G E
Sbjct: 474  DNAASSYRSFEGQLVESTSGSPSLLITGMNPCNLSASVSPLVEEDAEYVRSNVTQEDGSE 533

Query: 744  -DLLSTVNMSSEASEAVLTVQSINGTERSPVHAG-YSGDDS 628
             + L + N       AV T + I+G+E   V+AG  +GD+S
Sbjct: 534  GNYLESSNKVPLDVSAVTTTEEISGSESPLVYAGDDTGDNS 574



 Score =  110 bits (274), Expect = 7e-21
 Identities = 64/138 (46%), Positives = 78/138 (56%), Gaps = 11/138 (7%)
 Frame = -2

Query: 557  ELVSLSPPWTEGVLLLLKQAVECGRAILLDDHCLDADNVFKMTVAFAKTVPTGPVFRHGP 378
            +LVS S PWT+G+LLL KQA+E G A+LLDD  LDAD V++  V   ++VP GPVF+H  
Sbjct: 630  QLVSSSAPWTDGILLLWKQAIESGSAVLLDDSSLDADIVYERAVTLFRSVPPGPVFQHRS 689

Query: 377  KKKAVQRGEKKETNDLEL-----------KEAAAVAGTEITVPGXXXXXXXXXXXXXXKD 231
            KK  VQR E +ET DLE+           KE       E  V G              K 
Sbjct: 690  KKVPVQRPEGEETGDLEVQGTKNSPTSSRKETVVSGRRETAVSGSKVNSTKSTRKEKMKG 749

Query: 230  IKADYLNVAPQGSLRVDE 177
            I+ DYLNV P+GSL VDE
Sbjct: 750  IREDYLNVVPKGSLGVDE 767


>ref|XP_004239268.1| PREDICTED: CRS2-associated factor 1, chloroplastic [Solanum
            lycopersicum]
          Length = 766

 Score =  665 bits (1717), Expect = 0.0
 Identities = 341/580 (58%), Positives = 412/580 (71%), Gaps = 8/580 (1%)
 Frame = -1

Query: 2343 MSLKTVIQFPIFAPPDHHRCRRPATEVRFSRWNNANAEKFIRHERAQKELEDELRFEKRF 2164
            M   T+IQFPIF+PP      RPATE+RFSRWNNANAEKFIRHER QKE+EDE+RF KRF
Sbjct: 1    MGSTTLIQFPIFSPPAPPHSHRPATEIRFSRWNNANAEKFIRHERTQKEIEDEIRFHKRF 60

Query: 2163 DSAHNIAHNYNPAPPH--RXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLHPAFK 1990
            DS  +IA+NYNPAPP                                       +HPAFK
Sbjct: 61   DSVLSIANNYNPAPPSPVAEKTFKSTGTPSTPSSPSIPGKKSKYSRNFHNNPRQIHPAFK 120

Query: 1989 PLLKPRKFPVKNPETVSGENENKHYVSPNFRIGENGVSYEFPEAPFEYQYSYTETXXXXX 1810
            PL++ RK PV+ P+  +G+++       + ++ ENGV YEFPEAPF YQYSYTET     
Sbjct: 121  PLVRTRKIPVETPDETAGKSDI------DIKVDENGVCYEFPEAPFVYQYSYTETPKVKP 174

Query: 1809 XXXXXXLVSPFGPGSIPKPWLGRXXXXXXXXXXPEFDSFQLPPPHKKGVKPVQAPGPFLR 1630
                  LVSPFGP S+ +PW GR          PEFDSFQLPPPHKKGVKPVQAPGPFL 
Sbjct: 175  RKLREPLVSPFGPESMQRPWTGRKPLPPSKKKLPEFDSFQLPPPHKKGVKPVQAPGPFLA 234

Query: 1629 GSGPKYMKSREEILGEPLTKEEVNELIEGCKKSQRQLNMGRDGLTHNMLDNIHAHWKRRR 1450
            GSGPKY+KSREE+LGEPLTKEE+ ELI  CKK+ RQ+N+GRDGLTHNML+NIHAHWKR+R
Sbjct: 235  GSGPKYVKSREEVLGEPLTKEEMMELINSCKKTTRQMNIGRDGLTHNMLENIHAHWKRKR 294

Query: 1449 VCKIKCKGVCTVDMDNVRQQLEEKTGGKVIYNRGGVIYLFRGRNYNFKTRPRFPLMLWKP 1270
            VCKIKCKGVCTVDMDNV ++LEEKTGGK+IY++GGVIYLFRGRNYN+ TRPRFPLMLW+P
Sbjct: 295  VCKIKCKGVCTVDMDNVCEKLEEKTGGKIIYHKGGVIYLFRGRNYNYMTRPRFPLMLWRP 354

Query: 1269 ITPVYPRLIKRVPEGLTLEEASEMRKQGRNLTPICKLAKNGVYSDLVNNIREAFEACELV 1090
            +TPVYPRL++RVPEGLTLEEA+EMRK+GRNL PICKLAKNGVY DLV N+REAFEACELV
Sbjct: 355  VTPVYPRLVRRVPEGLTLEEATEMRKKGRNLIPICKLAKNGVYCDLVKNVREAFEACELV 414

Query: 1089 RINCQGLNGSDYRKVGAKLKDLVPCVLISFEYEHILIWRGRYWRSSL------PELEDGP 928
             INCQGLN SDYRK+GAKLKDLVPCVLISFE EHILIWRGR W SSL      PE+ +G 
Sbjct: 415  CINCQGLNPSDYRKIGAKLKDLVPCVLISFEQEHILIWRGRDWVSSLPEDGDNPEIREGS 474

Query: 927  KEVQEVKFDSVALAKPVVSALSSSVPTVSIVNPNDLNTSVSSTCGNVESKRISEFSEAGV 748
            + V     +     + V S   SS   V+ VN  +L+ + +   G+ +++ +    + G 
Sbjct: 475  ESVNAANTNRSFEVQVVASTAGSSSLPVTEVNTYNLSAN-TFPLGDEDAEYV---RKDGT 530

Query: 747  EDLLSTVNMSSEASEAVLTVQSINGTERSPVHAGYSGDDS 628
            ++  S  +    +++  +T   I+ +E   V+AG +GD+S
Sbjct: 531  KEDRSEDHYPESSNKVSVTTTGISKSEIPLVYAGDTGDNS 570



 Score = 99.8 bits (247), Expect = 1e-17
 Identities = 58/131 (44%), Positives = 78/131 (59%), Gaps = 4/131 (3%)
 Frame = -2

Query: 557  ELVSLSPPWTEGVLLLLKQAVECGRAILLDDHCLDADNVFKMTVAFAKTVPTGPVFRHGP 378
            +LVS   P TEG+LLL KQA+E G A++L+D  +DAD V++  VA + +VP GPVF+H P
Sbjct: 630  QLVSSITPCTEGILLLWKQAIESGSAVVLNDSSIDADIVYQRAVALSTSVPPGPVFQHQP 689

Query: 377  KKKAVQRGEKKETNDLEL----KEAAAVAGTEITVPGXXXXXXXXXXXXXXKDIKADYLN 210
            KK +VQR  ++E  DLE+     +  A +  E  V                K I+ DYLN
Sbjct: 690  KKVSVQRRGEEEIGDLEVGCTKLDTPASSRKETVVSSRKVNSTTSTRKEKKKGIRKDYLN 749

Query: 209  VAPQGSLRVDE 177
            V P+GSL VDE
Sbjct: 750  VVPKGSLGVDE 760


>ref|XP_009796721.1| PREDICTED: CRS2-associated factor 1, chloroplastic isoform X2
            [Nicotiana sylvestris]
          Length = 772

 Score =  664 bits (1714), Expect = 0.0
 Identities = 347/581 (59%), Positives = 411/581 (70%), Gaps = 9/581 (1%)
 Frame = -1

Query: 2343 MSLKTVIQFPIFAPPDHHRCRRPATEVRFSRWNNANAEKFIRHERAQKELEDELRFEKRF 2164
            M  +T+IQFPIF+PP      RPATEVRFSRWNNANAEKFIRHER QKE+EDE+RF KRF
Sbjct: 1    MGSRTLIQFPIFSPPAPPHNHRPATEVRFSRWNNANAEKFIRHERTQKEIEDEIRFHKRF 60

Query: 2163 DSAHNIAHNYNPAPPHRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLHPAFKPL 1984
            DSA NIA+NYNPAPP                                    + HPAFKP 
Sbjct: 61   DSALNIANNYNPAPPTPITEKKTFKSIGTPSSPSSPSIPGKKSKYSRNFQKNTHPAFKPF 120

Query: 1983 LKPRKFPVKNPETVSGENENKHYVSPNFRIGENGVSYEFPEAPFEYQYSYTETXXXXXXX 1804
            ++PR  P       SGE   K  +  + ++ ENGV YEFPEAPF YQYSYTET       
Sbjct: 121  VRPRNIPKD-----SGETTEKSAI--DIKVDENGVCYEFPEAPFVYQYSYTETPKLKPNK 173

Query: 1803 XXXXLVSPFGPGSIPKPWLGRXXXXXXXXXXPEFDSFQLPPPHKKGVKPVQAPGPFLRGS 1624
                LVSPFGP S+ +PW GR          PEFDSF+LPPPHKKGVKPVQAPGPFL GS
Sbjct: 174  LREPLVSPFGPESMRRPWTGRKPLPPSKKNLPEFDSFKLPPPHKKGVKPVQAPGPFLAGS 233

Query: 1623 GPKYMKSREEILGEPLTKEEVNELIEGCKKSQRQLNMGRDGLTHNMLDNIHAHWKRRRVC 1444
            GPKY++SREE+LGEPLTKEE+ +LI+ CKK+ RQLN+GRDGLTHNML+NIHAHWKR+RVC
Sbjct: 234  GPKYVRSREEVLGEPLTKEEMMQLIDSCKKTTRQLNIGRDGLTHNMLENIHAHWKRKRVC 293

Query: 1443 KIKCKGVCTVDMDNVRQQLEEKTGGKVIYNRGGVIYLFRGRNYNFKTRPRFPLMLWKPIT 1264
            KIKCKGVCTVDMDNV  +LEEKTGGK+IY++GG+IYLFRGRNYN+KTRPRFPLMLW+P+T
Sbjct: 294  KIKCKGVCTVDMDNVCDKLEEKTGGKIIYHKGGLIYLFRGRNYNYKTRPRFPLMLWRPVT 353

Query: 1263 PVYPRLIKRVPEGLTLEEASEMRKQGRNLTPICKLAKNGVYSDLVNNIREAFEACELVRI 1084
            PVYPRL++RVPEGLTLEEA+EMRK+GRNL PICKL KNGVY DL  NIREAFEACELVRI
Sbjct: 354  PVYPRLVQRVPEGLTLEEATEMRKKGRNLIPICKLGKNGVYCDLAKNIREAFEACELVRI 413

Query: 1083 NCQGLNGSDYRKVGAKLKDLVPCVLISFEYEHILIWRGRYWRSSLPELEDGPKEVQEVKF 904
            NCQG+N SDYRK+GAKLKDLVPCVLISFE EHIL+WRG  W SSLP+ ++ P+  +  K 
Sbjct: 414  NCQGMNPSDYRKIGAKLKDLVPCVLISFEQEHILMWRGWDWVSSLPDDKEKPERRKGSKA 473

Query: 903  DSVAL------AKPVVSALSSSVPTVSIVNPNDLNTSVSSTC-GNVESKRISEFSEAGVE 745
            D+ A        + V S   S    ++ +NP +L+ +VS     + E  R +   E G +
Sbjct: 474  DNAASNYRSFEGQLVESTSGSPSLLITEMNPCNLSANVSPLVEEDAEYVRSNVTEEDGSK 533

Query: 744  -DLLSTVNMSSEASEAVLTVQSINGTERSPVHAG-YSGDDS 628
               L + N       AV T + I+G+E  PV+AG  +GD+S
Sbjct: 534  GTYLESSNKVPLDVSAVTTREEISGSESPPVYAGDDTGDNS 574



 Score =  108 bits (271), Expect = 2e-20
 Identities = 63/138 (45%), Positives = 77/138 (55%), Gaps = 11/138 (7%)
 Frame = -2

Query: 557  ELVSLSPPWTEGVLLLLKQAVECGRAILLDDHCLDADNVFKMTVAFAKTVPTGPVFRHGP 378
            +LVS S PWTEG+LLL KQA+E G A+LLDD  LDAD V++  V  +++ P GPVF+H  
Sbjct: 629  QLVSSSAPWTEGILLLRKQAIESGSAVLLDDSSLDADIVYERAVTLSRSAPPGPVFQHRS 688

Query: 377  KKKAVQRGEKKETNDLEL-----------KEAAAVAGTEITVPGXXXXXXXXXXXXXXKD 231
            KK  VQR E +ET DLE+           KE       E    G              K 
Sbjct: 689  KKVPVQRPEGEETGDLEVQGTKNSLTSSRKETVVSGRRETAFSGSKANSTKSTRKEKMKG 748

Query: 230  IKADYLNVAPQGSLRVDE 177
            I+ DYLNV P+GSL VDE
Sbjct: 749  IREDYLNVVPKGSLGVDE 766


>ref|XP_009796720.1| PREDICTED: CRS2-associated factor 1, chloroplastic isoform X1
            [Nicotiana sylvestris]
          Length = 773

 Score =  660 bits (1702), Expect = 0.0
 Identities = 347/582 (59%), Positives = 411/582 (70%), Gaps = 10/582 (1%)
 Frame = -1

Query: 2343 MSLKTVIQFPIFAPPDHHRCRRPATEVRFSRWNNANAEKFIRHERAQKELEDELRFEKRF 2164
            M  +T+IQFPIF+PP      RPATEVRFSRWNNANAEKFIRHER QKE+EDE+RF KRF
Sbjct: 1    MGSRTLIQFPIFSPPAPPHNHRPATEVRFSRWNNANAEKFIRHERTQKEIEDEIRFHKRF 60

Query: 2163 DSAHNIAHNYNPAPPHRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLHPAFKPL 1984
            DSA NIA+NYNPAPP                                    + HPAFKP 
Sbjct: 61   DSALNIANNYNPAPPTPITEKKTFKSIGTPSSPSSPSIPGKKSKYSRNFQKNTHPAFKPF 120

Query: 1983 LKPRKFPVKNPETVSGENENKHYVSPNFRIGENGVSYEFPEAPFEYQYSYTETXXXXXXX 1804
            ++PR  P       SGE   K  +  + ++ ENGV YEFPEAPF YQYSYTET       
Sbjct: 121  VRPRNIPKD-----SGETTEKSAI--DIKVDENGVCYEFPEAPFVYQYSYTETPKLKPNK 173

Query: 1803 XXXXLVSPFGPGSIPKPWLGRXXXXXXXXXXPEFDSFQLPPPHKKGVKPVQAPGPFLRGS 1624
                LVSPFGP S+ +PW GR          PEFDSF+LPPPHKKGVKPVQAPGPFL GS
Sbjct: 174  LREPLVSPFGPESMRRPWTGRKPLPPSKKNLPEFDSFKLPPPHKKGVKPVQAPGPFLAGS 233

Query: 1623 GPKYMKSREEILGEPLTKEEVNELIEGCKKSQRQLNM-GRDGLTHNMLDNIHAHWKRRRV 1447
            GPKY++SREE+LGEPLTKEE+ +LI+ CKK+ RQLN+ GRDGLTHNML+NIHAHWKR+RV
Sbjct: 234  GPKYVRSREEVLGEPLTKEEMMQLIDSCKKTTRQLNIAGRDGLTHNMLENIHAHWKRKRV 293

Query: 1446 CKIKCKGVCTVDMDNVRQQLEEKTGGKVIYNRGGVIYLFRGRNYNFKTRPRFPLMLWKPI 1267
            CKIKCKGVCTVDMDNV  +LEEKTGGK+IY++GG+IYLFRGRNYN+KTRPRFPLMLW+P+
Sbjct: 294  CKIKCKGVCTVDMDNVCDKLEEKTGGKIIYHKGGLIYLFRGRNYNYKTRPRFPLMLWRPV 353

Query: 1266 TPVYPRLIKRVPEGLTLEEASEMRKQGRNLTPICKLAKNGVYSDLVNNIREAFEACELVR 1087
            TPVYPRL++RVPEGLTLEEA+EMRK+GRNL PICKL KNGVY DL  NIREAFEACELVR
Sbjct: 354  TPVYPRLVQRVPEGLTLEEATEMRKKGRNLIPICKLGKNGVYCDLAKNIREAFEACELVR 413

Query: 1086 INCQGLNGSDYRKVGAKLKDLVPCVLISFEYEHILIWRGRYWRSSLPELEDGPKEVQEVK 907
            INCQG+N SDYRK+GAKLKDLVPCVLISFE EHIL+WRG  W SSLP+ ++ P+  +  K
Sbjct: 414  INCQGMNPSDYRKIGAKLKDLVPCVLISFEQEHILMWRGWDWVSSLPDDKEKPERRKGSK 473

Query: 906  FDSVAL------AKPVVSALSSSVPTVSIVNPNDLNTSVSSTC-GNVESKRISEFSEAGV 748
             D+ A        + V S   S    ++ +NP +L+ +VS     + E  R +   E G 
Sbjct: 474  ADNAASNYRSFEGQLVESTSGSPSLLITEMNPCNLSANVSPLVEEDAEYVRSNVTEEDGS 533

Query: 747  E-DLLSTVNMSSEASEAVLTVQSINGTERSPVHAG-YSGDDS 628
            +   L + N       AV T + I+G+E  PV+AG  +GD+S
Sbjct: 534  KGTYLESSNKVPLDVSAVTTREEISGSESPPVYAGDDTGDNS 575



 Score =  108 bits (271), Expect = 2e-20
 Identities = 63/138 (45%), Positives = 77/138 (55%), Gaps = 11/138 (7%)
 Frame = -2

Query: 557  ELVSLSPPWTEGVLLLLKQAVECGRAILLDDHCLDADNVFKMTVAFAKTVPTGPVFRHGP 378
            +LVS S PWTEG+LLL KQA+E G A+LLDD  LDAD V++  V  +++ P GPVF+H  
Sbjct: 630  QLVSSSAPWTEGILLLRKQAIESGSAVLLDDSSLDADIVYERAVTLSRSAPPGPVFQHRS 689

Query: 377  KKKAVQRGEKKETNDLEL-----------KEAAAVAGTEITVPGXXXXXXXXXXXXXXKD 231
            KK  VQR E +ET DLE+           KE       E    G              K 
Sbjct: 690  KKVPVQRPEGEETGDLEVQGTKNSLTSSRKETVVSGRRETAFSGSKANSTKSTRKEKMKG 749

Query: 230  IKADYLNVAPQGSLRVDE 177
            I+ DYLNV P+GSL VDE
Sbjct: 750  IREDYLNVVPKGSLGVDE 767


>ref|XP_006338151.1| PREDICTED: CRS2-associated factor 1, chloroplastic-like [Solanum
            tuberosum]
          Length = 764

 Score =  656 bits (1693), Expect = 0.0
 Identities = 344/577 (59%), Positives = 403/577 (69%), Gaps = 5/577 (0%)
 Frame = -1

Query: 2343 MSLKTVIQFPIFAPPDHHRCRRPATEVRFSRWNNANAEKFIRHERAQKELEDELRFEKRF 2164
            M   T+IQFPIF+PP      RPATE+RFSRWNNANAEKFIRHER QKE+EDE+RF KRF
Sbjct: 1    MGSTTLIQFPIFSPPAPPHSHRPATEIRFSRWNNANAEKFIRHERTQKEIEDEIRFHKRF 60

Query: 2163 DSAHNIAHNYNPAPPH--RXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLHPAFK 1990
            DS  NIA+NYNPAPP                                       +HPAFK
Sbjct: 61   DSVLNIANNYNPAPPSPVTEKTFKSVGTPSTPSSPSIPGKKSKYSRNFQNNPRQIHPAFK 120

Query: 1989 PLLKPRKFPVKNPETVSGENENKHYVSPNFRIGENGVSYEFPEAPFEYQYSYTETXXXXX 1810
            PL++ RK P    +  + E   K  +  + ++ ENGV YEFPEAPF YQYSYTET     
Sbjct: 121  PLVRTRKIP----DETADETARKSAI--DIKVDENGVCYEFPEAPFVYQYSYTETPKLKP 174

Query: 1809 XXXXXXLVSPFGPGSIPKPWLGRXXXXXXXXXXPEFDSFQLPPPHKKGVKPVQAPGPFLR 1630
                  LVSPFGP S+ +PW GR          PEFDSFQLPPPHKKGVKPVQAPGPFL 
Sbjct: 175  KKLREPLVSPFGPESMQRPWTGRKPLPPSKKKRPEFDSFQLPPPHKKGVKPVQAPGPFLA 234

Query: 1629 GSGPKYMKSREEILGEPLTKEEVNELIEGCKKSQRQLNMGRDGLTHNMLDNIHAHWKRRR 1450
            GSGPKY+KSREE+LGEPLTKEE+ ELI  CKK+ RQ+N+GRDGLTHNML+NIHAHWKR+R
Sbjct: 235  GSGPKYVKSREEVLGEPLTKEEMMELINSCKKTTRQMNIGRDGLTHNMLENIHAHWKRKR 294

Query: 1449 VCKIKCKGVCTVDMDNVRQQLEEKTGGKVIYNRGGVIYLFRGRNYNFKTRPRFPLMLWKP 1270
            VCKIKCKGVCTVDMDNV ++LEEKTGGK+IY++GG+IYLFRGRNYN+KTRPRFPLMLW+P
Sbjct: 295  VCKIKCKGVCTVDMDNVCEKLEEKTGGKIIYHKGGLIYLFRGRNYNYKTRPRFPLMLWRP 354

Query: 1269 ITPVYPRLIKRVPEGLTLEEASEMRKQGRNLTPICKLAKNGVYSDLVNNIREAFEACELV 1090
            +TPVYPRL++RVPEGLTLEEA+ MRK+GRNL PICKLAKNGVY DLV N+REAFEACELV
Sbjct: 355  VTPVYPRLVQRVPEGLTLEEATLMRKKGRNLIPICKLAKNGVYCDLVKNVREAFEACELV 414

Query: 1089 RINCQGLNGSDYRKVGAKLKDLVPCVLISFEYEHILIWRGRYWRSSLPELEDGPKEVQEV 910
             INCQGLN SDYRK+GAKLKDLVPCVLISFE EHIL+WRGR W SSLP  ED   +  + 
Sbjct: 415  SINCQGLNPSDYRKIGAKLKDLVPCVLISFEQEHILMWRGRDWVSSLP--EDRDNDSDKA 472

Query: 909  KFDSVALAKPVVSALSSSVPTVSIVNPNDLNTSVSS-TCGNVESK--RISEFSEAGVEDL 739
               + +L   VV++ S S P + I   N  N S ++   G  ES+  R     E   ED 
Sbjct: 473  ANTNRSLEVQVVASTSGS-PRLPITEMNTCNLSANTFPLGEEESEYVRRDGTKEDRSEDH 531

Query: 738  LSTVNMSSEASEAVLTVQSINGTERSPVHAGYSGDDS 628
                +  +      +T   I+ +E   V+AG +GD+S
Sbjct: 532  YLESSNKAPLDVCSVTTTGISESEIPLVYAGDTGDNS 568



 Score =  103 bits (258), Expect = 5e-19
 Identities = 60/131 (45%), Positives = 78/131 (59%), Gaps = 4/131 (3%)
 Frame = -2

Query: 557  ELVSLSPPWTEGVLLLLKQAVECGRAILLDDHCLDADNVFKMTVAFAKTVPTGPVFRHGP 378
            +LVS   P TEG+LLL KQA+E G A+LLDD  +DAD V++  VA + + P GPVF+H P
Sbjct: 628  QLVSSITPCTEGILLLWKQAIESGSAVLLDDSSIDADIVYQRAVALSTSAPAGPVFQHQP 687

Query: 377  KKKAVQRGEKKETNDLEL----KEAAAVAGTEITVPGXXXXXXXXXXXXXXKDIKADYLN 210
            KK +VQR  ++E  DLE+     +  A +  E  V G              K I+ DYLN
Sbjct: 688  KKVSVQRRGEEEIGDLEVGCTKLDTPASSRKETAVSGRKVNSTTSTRKEKLKGIREDYLN 747

Query: 209  VAPQGSLRVDE 177
            V P+GSL VDE
Sbjct: 748  VVPKGSLGVDE 758


>ref|XP_012845493.1| PREDICTED: CRS2-associated factor 1, chloroplastic [Erythranthe
            guttatus]
          Length = 708

 Score =  654 bits (1688), Expect = 0.0
 Identities = 336/498 (67%), Positives = 378/498 (75%), Gaps = 1/498 (0%)
 Frame = -1

Query: 2343 MSLKTVIQFPIFAPPDH-HRCRRPATEVRFSRWNNANAEKFIRHERAQKELEDELRFEKR 2167
            M+LKT  QFP+FAPP    +  R  TE+RFSRWNNANA+KFIRHER QKE+ED+LRFEKR
Sbjct: 1    MALKT--QFPLFAPPHLLPQPHRAPTEIRFSRWNNANAQKFIRHERNQKEIEDQLRFEKR 58

Query: 2166 FDSAHNIAHNYNPAPPHRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLHPAFKP 1987
            FDSA  I+HNYNPAPPH                                     HPAFKP
Sbjct: 59   FDSALVISHNYNPAPPHHTVFKSTGTPSAPSSPSIPGKSSKYSKPPPHKPP---HPAFKP 115

Query: 1986 LLKPRKFPVKNPETVSGENENKHYVSPNFRIGENGVSYEFPEAPFEYQYSYTETXXXXXX 1807
              KPRK P+      + E E  + V PNFRI ENGVSYE PEAPF YQYSYTET      
Sbjct: 116  PPKPRKIPIPP----ANEIETPNPVGPNFRIDENGVSYEMPEAPFVYQYSYTETPKVKPV 171

Query: 1806 XXXXXLVSPFGPGSIPKPWLGRXXXXXXXXXXPEFDSFQLPPPHKKGVKPVQAPGPFLRG 1627
                 L+SPFGP ++ KPWLGR          PEFDSFQLPPPHKKGVKPVQAPGPFL G
Sbjct: 172  KLREPLMSPFGPVTMAKPWLGRRPLPPSKRKLPEFDSFQLPPPHKKGVKPVQAPGPFLPG 231

Query: 1626 SGPKYMKSREEILGEPLTKEEVNELIEGCKKSQRQLNMGRDGLTHNMLDNIHAHWKRRRV 1447
            SGPKY+KSREEILG+PL+KEE+ ELI+G KKS RQLNMGRDGLTHNMLDNIHA WKRRRV
Sbjct: 232  SGPKYVKSREEILGDPLSKEEIKELIDGSKKSNRQLNMGRDGLTHNMLDNIHALWKRRRV 291

Query: 1446 CKIKCKGVCTVDMDNVRQQLEEKTGGKVIYNRGGVIYLFRGRNYNFKTRPRFPLMLWKPI 1267
            CKIKCKGVCTVDM+NV QQLE+KTGGK+IYNRGGVIYLFRGRNYN+K+RPRFPLMLWKPI
Sbjct: 292  CKIKCKGVCTVDMENVCQQLEDKTGGKIIYNRGGVIYLFRGRNYNYKSRPRFPLMLWKPI 351

Query: 1266 TPVYPRLIKRVPEGLTLEEASEMRKQGRNLTPICKLAKNGVYSDLVNNIREAFEACELVR 1087
            +PVYPRL++RVPEGLTLEEAS MRK+GR+LTPICKLAKNGVYSDLV N+REAFEACELVR
Sbjct: 352  SPVYPRLVRRVPEGLTLEEASAMRKKGRDLTPICKLAKNGVYSDLVENVREAFEACELVR 411

Query: 1086 INCQGLNGSDYRKVGAKLKDLVPCVLISFEYEHILIWRGRYWRSSLPELEDGPKEVQEVK 907
            INCQGLN SD++K+GAKLK LVPCVLISFEYEHIL+WRGR W+S+L +L  G K  ++V+
Sbjct: 412  INCQGLNPSDHKKIGAKLKALVPCVLISFEYEHILVWRGRDWKSTL-DLNGGLKGSKKVE 470

Query: 906  FDSVALAKPVVSALSSSV 853
                  +  V  A S+ V
Sbjct: 471  PAPGVTSLLVTEATSNDV 488



 Score = 97.8 bits (242), Expect = 4e-17
 Identities = 60/127 (47%), Positives = 75/127 (59%), Gaps = 9/127 (7%)
 Frame = -2

Query: 530 TEGVLLLLKQAVECGRAILLDDHC--LDADNVFKMTVAFAKTVPTGPVFRHGPKK--KAV 363
           T+ +LLL KQAVE G A++ D+H   LD+D VFK  VAFAKT P GPVF   PKK  + V
Sbjct: 576 TQAILLLRKQAVENGMALVFDEHSVLLDSDAVFKTAVAFAKTAPVGPVFSKRPKKAVEEV 635

Query: 362 QRGEKK-----ETNDLELKEAAAVAGTEITVPGXXXXXXXXXXXXXXKDIKADYLNVAPQ 198
           ++ +KK     E NDL L + A+  GT I V                KDI+ DYLNV PQ
Sbjct: 636 EKSKKKNNKGRECNDLVLSKGASALGTGIYVSKGMDERKNSSRNEKLKDIRGDYLNVVPQ 695

Query: 197 GSLRVDE 177
           G+L +DE
Sbjct: 696 GNLGIDE 702


>ref|XP_010687587.1| PREDICTED: CRS2-associated factor 1, chloroplastic [Beta vulgaris
            subsp. vulgaris] gi|870851377|gb|KMT03424.1| hypothetical
            protein BVRB_8g191090 [Beta vulgaris subsp. vulgaris]
          Length = 727

 Score =  567 bits (1461), Expect(2) = 0.0
 Identities = 312/601 (51%), Positives = 384/601 (63%), Gaps = 26/601 (4%)
 Frame = -1

Query: 2343 MSLKTVIQFPIFAPPDHHRCRR---PATEVRFSRWNNANAEKFIRHERAQKELEDELRFE 2173
            M+LKTVI FPIFAP             TE+RFSRWNNANAEKF R+ R Q+++ED+LR  
Sbjct: 1    MALKTVIPFPIFAPISTTTTTTYTTSTTELRFSRWNNANAEKFERNRRTQQQIEDDLRRL 60

Query: 2172 KRFDSAHNIAHNYNPAPPHRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXS----- 2008
            +RF+SA NI+   + A P +                                        
Sbjct: 61   RRFESALNISTINDSATPAKTTPNFKSTGTPSVPSLSSIPGKKSKYSKPIKNPNPKLSNS 120

Query: 2007 LHPAFKPLLKPRKFPVKNPETVSGENENKHYVSPNFRIGENGVSYEFPEAPFEYQYSYTE 1828
             HPAF+ + K  K P      V GE +         R+GENGV+Y  P APFEY YSYTE
Sbjct: 121  THPAFRRVPKRAKLPETG---VGGETD--------IRVGENGVTYVVPGAPFEYMYSYTE 169

Query: 1827 TXXXXXXXXXXXL-VSPFGPGSIPKPWLGRXXXXXXXXXXPEFDSFQLPPPHKKGVKPVQ 1651
            T             V+PFGPG++P+PW GR          P+FDSF++P   KKGVKPVQ
Sbjct: 170  TPKNVRPVGLREPAVAPFGPGTMPRPWTGRKPLPGSKKELPQFDSFRVPEAGKKGVKPVQ 229

Query: 1650 APGPFLRGSGPKYMKSREEILGEPLTKEEVNELIEGCKKSQRQLNMGRDGLTHNMLDNIH 1471
             PGPFL GSGP+Y+ SREE+LGEPLT++EV EL+EGC++++RQLNMGRDGLTHNMLDNIH
Sbjct: 230  KPGPFLPGSGPRYVVSREEVLGEPLTEDEVKELVEGCRRTKRQLNMGRDGLTHNMLDNIH 289

Query: 1470 AHWKRRRVCKIKCKGVCTVDMDNVRQQLEEKTGGKVIYNRGGVIYLFRGRNYNFKTRPRF 1291
            AHWKRRRVCKIKCKGVCTVDMDNV QQLEEKTGG++IY RGG+++LFRGRNYN+KTRPRF
Sbjct: 290  AHWKRRRVCKIKCKGVCTVDMDNVCQQLEEKTGGRIIYRRGGIVFLFRGRNYNYKTRPRF 349

Query: 1290 PLMLWKPITPVYPRLIKRVPEGLTLEEASEMRKQGRNLTPICKLAKNGVYSDLVNNIREA 1111
            PLMLWKP+TPVYPRL+ RVPEGLTLEEAS+MR++GR L PICKL KNGVY +L  ++REA
Sbjct: 350  PLMLWKPVTPVYPRLVARVPEGLTLEEASDMRRRGRELIPICKLGKNGVYVNLAKHVREA 409

Query: 1110 FEACELVRINCQGLNGSDYRKVGAKLKDLVPCVLISFEYEHILIWRGRYWRSSLPELEDG 931
            FEACE+VRINCQGLN SDYRK+GAKLKD+VPCVLISFE EHIL+WRGR W+SSL   E G
Sbjct: 410  FEACEMVRINCQGLNPSDYRKIGAKLKDMVPCVLISFENEHILMWRGRDWKSSLLLPEVG 469

Query: 930  PKEVQEVKFDSVALAKPVVSALSSSVPTVSIVNPNDLNTSVSSTCGNVE--------SKR 775
             K  +  + DS  L         S     S+ + ++  +S S      E        +  
Sbjct: 470  AKSYKISETDSAEL-----HGSDSDTAGDSVDSEDEEESSSSLNLSKQEIDVEMLNLNNG 524

Query: 774  ISEFSEAGVEDLLSTVNMSSEAS-----EAVLTVQ----SINGTERSPVHAGYSGDDSEA 622
            + +  E GV ++ +   +  +AS      +VLT       I+GT+   V  G S  DS  
Sbjct: 525  LGDGLEVGVTEVENKHFVKDDASLEMNVNSVLTQSGSGLDIDGTDDLEVSPGKSSGDSAL 584

Query: 621  F 619
            +
Sbjct: 585  Y 585



 Score =  107 bits (266), Expect(2) = 0.0
 Identities = 58/123 (47%), Positives = 72/123 (58%)
 Frame = -2

Query: 545 LSPPWTEGVLLLLKQAVECGRAILLDDHCLDADNVFKMTVAFAKTVPTGPVFRHGPKKKA 366
           LS   TEGVL LL QAVE G A++LD   LDAD V++ +VAFAK  P GPVFRH P+K A
Sbjct: 599 LSSSCTEGVLYLLSQAVESGSAVILDASSLDADMVYERSVAFAKVAPPGPVFRHRPRKVA 658

Query: 365 VQRGEKKETNDLELKEAAAVAGTEITVPGXXXXXXXXXXXXXXKDIKADYLNVAPQGSLR 186
           +Q+ E+ +T D +  EAA V G                      D K + L+V PQGSLR
Sbjct: 659 IQKSEELKTGDTDANEAAPVVGPVTKSNAKKSEERKSSVTQKVLDFKQEILDVVPQGSLR 718

Query: 185 VDE 177
           +DE
Sbjct: 719 IDE 721


>ref|XP_010060935.1| PREDICTED: CRS2-associated factor 1, chloroplastic [Eucalyptus
            grandis]
          Length = 800

 Score =  565 bits (1457), Expect(2) = e-177
 Identities = 305/598 (51%), Positives = 383/598 (64%), Gaps = 36/598 (6%)
 Frame = -1

Query: 2346 QMSLKTVIQFPIFAPPD----------HHRCRRPA-----TEVRFSRWNNANAEKFIRHE 2212
            +M+LK  + FPIFAPP           +    RP      T+VRFSRWNN NAE+F    
Sbjct: 78   EMALKFALPFPIFAPPSPLNPGPAPGPNAAPHRPPPTLTPTQVRFSRWNNTNAERFNERR 137

Query: 2211 RAQKELEDELRFEKRFDSAHNIAHNYNPAPPHRXXXXXXXXXXXXXXXXXXXXXXXXXXX 2032
            RAQ+E+ED++R E+RF+SA  I+   +PA                               
Sbjct: 138  RAQQEIEDDIRRERRFNSATRISQVDDPAAVGGDAAVSGSPETFHSRGTPSSPSTSSIPG 197

Query: 2031 XXXXXXXSLHPAFKPLLKPRKFPVKNPETVSGENENKHYVSPNFRIGENGVSYEFPEAPF 1852
                     HPAF+ + + R+   +  +      + K     N  + E+G+SY    APF
Sbjct: 198  KKSKYSKDRHPAFRRISQIRRTQEEKIDARGDPMDRK----ANVVLSEDGLSYVIDGAPF 253

Query: 1851 EYQYSYTETXXXXXXXXXXXLVSPFGPGSIPKPWLGRXXXXXXXXXXPEFDSFQLPPPHK 1672
            E++YSYTET             +PFGP ++ +PW GR           EFDSF+LPPP K
Sbjct: 254  EFKYSYTETPKVKPLKLREAPYAPFGPTTMSRPWTGRAPLPPCKKKLKEFDSFRLPPPGK 313

Query: 1671 KGVKPVQAPGPFLRGSGPKYMKSREEILGEPLTKEEVNELIEGCKKSQRQLNMGRDGLTH 1492
            KGVKPVQ+PGPFL G GP+Y+K+REEILGEPLT+EEV +L+ GC KS+RQ+NMGRDGLTH
Sbjct: 314  KGVKPVQSPGPFLPGRGPRYVKTREEILGEPLTEEEVRDLVNGCLKSKRQMNMGRDGLTH 373

Query: 1491 NMLDNIHAHWKRRRVCKIKCKGVCTVDMDNVRQQLEEKTGGKVIYNRGGVIYLFRGRNYN 1312
            NMLDNIHAHWKRRRVCKIKCKGVCTVDMDNV+QQLEE+TGGK+IY++GGV+YLFRGRNYN
Sbjct: 374  NMLDNIHAHWKRRRVCKIKCKGVCTVDMDNVKQQLEERTGGKIIYSKGGVLYLFRGRNYN 433

Query: 1311 FKTRPRFPLMLWKPITPVYPRLIKRVPEGLTLEEASEMRKQGRNLTPICKLAKNGVYSDL 1132
            ++TRPRFPLMLWKPITPVYPRLIKRVPEGLTLE+A+EMRK+GR L PICKL KNGVY DL
Sbjct: 434  YRTRPRFPLMLWKPITPVYPRLIKRVPEGLTLEKATEMRKKGRALAPICKLGKNGVYCDL 493

Query: 1131 VNNIREAFEACELVRINCQGLNGSDYRKVGAKLKDLVPCVLISFEYEHILIWRGRYWRSS 952
            V N+REAFE CELVRINC+G+NGSDYRK+GAKLKDLVPCVLISFE EHIL+WRGR W+SS
Sbjct: 494  VQNVREAFEECELVRINCKGMNGSDYRKIGAKLKDLVPCVLISFEDEHILMWRGREWKSS 553

Query: 951  LPELE----DGPKEVQEVKFDSVALAKPVVSAL--SSSVPTVS---IVNPNDLN--TSVS 805
             P  E    D P  V   +  S     PV+S       VP  +    V  N++   T   
Sbjct: 554  FPTPEVYYKDYPSSVDRAREGS---PLPVISEQDEKQEVPGKTGPPFVQENEVYGVTDED 610

Query: 804  STCGNVESKRIS---EFSEA-------GVEDLLSTVNMSSEASEAVLTVQSINGTERS 661
            S  G V+  +I+   E SEA        ++  ++  ++ +E SE ++  + ++    +
Sbjct: 611  SILGEVDGNKITVGGESSEADESEGAKSIDAAVAMPDVVAEESETMVETERLHNVSEA 668



 Score = 86.3 bits (212), Expect(2) = e-177
 Identities = 50/121 (41%), Positives = 70/121 (57%)
 Frame = -2

Query: 539  PPWTEGVLLLLKQAVECGRAILLDDHCLDADNVFKMTVAFAKTVPTGPVFRHGPKKKAVQ 360
            PP +E VLLLL+QAVE G A++LD + LDAD  ++  VAFAKT P GPVFRH P++   +
Sbjct: 680  PPCSEQVLLLLRQAVENGSALILDTNSLDADTAYQRAVAFAKTAPPGPVFRHRPRRAVSK 739

Query: 359  RGEKKETNDLELKEAAAVAGTEITVPGXXXXXXXXXXXXXXKDIKADYLNVAPQGSLRVD 180
            +  K+E  +++ +   +   TE                   K+    +LNV+P GSLRVD
Sbjct: 740  KIVKEEDGNVDAEVEPSSTRTE------RGKKQSDLKIQRKKEFDEPHLNVSPLGSLRVD 793

Query: 179  E 177
            E
Sbjct: 794  E 794


>gb|KJB64997.1| hypothetical protein B456_010G075200 [Gossypium raimondii]
          Length = 732

 Score =  554 bits (1428), Expect(2) = e-175
 Identities = 298/595 (50%), Positives = 365/595 (61%), Gaps = 11/595 (1%)
 Frame = -1

Query: 2343 MSLKTVIQFPIFAPPD-------HHRCRRPATEVRFSRWNNANAEKFIRHERAQKELEDE 2185
            M+LK  I FPIF+PP        +    RP TE+RFSRWNNANAEKF +  RAQ+E+ED+
Sbjct: 1    MALKLPISFPIFSPPSPTPYTNTNEPGHRPPTEIRFSRWNNANAEKFNQRRRAQQEIEDD 60

Query: 2184 LRFEKRFDSAHNIAHNYNPAPPHRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSL 2005
            +R  +RFDSA  IA    P+                                        
Sbjct: 61   IRRYRRFDSATKIATTVEPSSSSTPQPTETYKSFGSPSSPSSPSIPGKKSKYSKPPN--- 117

Query: 2004 HPAFKPLLKPRKFPVKNPETVSGENENKHYVSPNFRIGENGVSYEFPEAPFEYQYSYTET 1825
            HPAF+   K    P  +P               N  IGE+GVS+    APFE++YSYTET
Sbjct: 118  HPAFRKFSKAANPPPPSPLDKK---------PANVAIGEDGVSFVIDGAPFEFKYSYTET 168

Query: 1824 XXXXXXXXXXXLVSPFGPGSIPKPWLGRXXXXXXXXXXPEFDSFQLPPPHKKGVKPVQAP 1645
                         SPFGP ++P+PW GR           EFDSF LPPP KKGVK +Q P
Sbjct: 169  PKVKPVKLREPPYSPFGPTTMPRPWTGRAPLPPSKKKMKEFDSFVLPPPEKKGVKSIQKP 228

Query: 1644 GPFLRGSGPKYMKSREEILGEPLTKEEVNELIEGCKKSQRQLNMGRDGLTHNMLDNIHAH 1465
            GP+L G+GP+Y++SREEILGEPLT EEV EL+  C KSQRQLNMGRDGLTHNMLDNIHAH
Sbjct: 229  GPYLPGTGPRYVQSREEILGEPLTAEEVKELVNSCLKSQRQLNMGRDGLTHNMLDNIHAH 288

Query: 1464 WKRRRVCKIKCKGVCTVDMDNVRQQLEEKTGGKVIYNRGGVIYLFRGRNYNFKTRPRFPL 1285
            WKRRRVCKIKCKGVCTVDM+N+ +QLEE+TGGKVI+ RGGV++LFRGRNYN+KTRPRFPL
Sbjct: 289  WKRRRVCKIKCKGVCTVDMNNICEQLEERTGGKVIFRRGGVLFLFRGRNYNYKTRPRFPL 348

Query: 1284 MLWKPITPVYPRLIKRVPEGLTLEEASEMRKQGRNLTPICKLAKNGVYSDLVNNIREAFE 1105
            MLWKP+TPVYPRLI RVPEGLT +EA+EMRK+GR L PI KLAKNGVY+DLV N+REAFE
Sbjct: 349  MLWKPVTPVYPRLIPRVPEGLTPQEATEMRKKGRKLMPIRKLAKNGVYADLVKNVREAFE 408

Query: 1104 ACELVRINCQGLNGSDYRKVGAKLKDLVPCVLISFEYEHILIWRGRYWRSSL--PELEDG 931
             CELVRINCQG+ GSDY+K+GAKLK+LVPCVLISFE EHIL+WRG  W+SS   P    G
Sbjct: 409  ECELVRINCQGIKGSDYKKIGAKLKELVPCVLISFEDEHILMWRGNNWKSSFSKPSSNSG 468

Query: 930  PKEVQEVKFDSVALAKPVVSALSSS--VPTVSIVNPNDLNTSVSSTCGNVESKRISEFSE 757
               +++   D+V++   +     S   V T  I+  +          G+    +++    
Sbjct: 469  ---IEKTNADTVSITGQLEGQELSPTYVQTAGIMEASQTTLDGMDYAGHESESKVNTSGS 525

Query: 756  AGVEDLLSTVNMSSEASEAVLTVQSINGTERSPVHAGYSGDDSEAFXXXXXXXPR 592
            A  +D+ S    S        T+    G E    + G + ++  A        PR
Sbjct: 526  AIADDIKSAGGESE-------TLTMTYGLEHILDNPGRANEEPSAMLMESHVGPR 573



 Score = 92.0 bits (227), Expect(2) = e-175
 Identities = 52/123 (42%), Positives = 73/123 (59%)
 Frame = -2

Query: 545 LSPPWTEGVLLLLKQAVECGRAILLDDHCLDADNVFKMTVAFAKTVPTGPVFRHGPKKKA 366
           +S P TE VL L+KQAVE G A++LDD  LDAD +++ +VAF+++ P GPVFR  P+K +
Sbjct: 611 MSAPCTERVLHLMKQAVESGSAVVLDDPTLDADGIYQRSVAFSRSAPPGPVFRRQPRKMS 670

Query: 365 VQRGEKKETNDLELKEAAAVAGTEITVPGXXXXXXXXXXXXXXKDIKADYLNVAPQGSLR 186
           +Q+ ++ E  +LE+KE  A       VP               K I   +  V P+GSLR
Sbjct: 671 IQKNKELEPGNLEMKEVTA-------VPHKRGNEKQASKPRRIKVIAEHHPEVVPKGSLR 723

Query: 185 VDE 177
           VDE
Sbjct: 724 VDE 726


>ref|XP_010263189.1| PREDICTED: CRS2-associated factor 1, chloroplastic [Nelumbo nucifera]
          Length = 750

 Score =  623 bits (1606), Expect = e-175
 Identities = 333/599 (55%), Positives = 399/599 (66%), Gaps = 25/599 (4%)
 Frame = -1

Query: 2343 MSLKTVIQFPIFAP--PDHHRCRRPATEVRFSRWNNANAEKFIRHERAQKELEDELRFEK 2170
            MSLKT   FPIFAP  P H    RPATEVRFSRWNNANAE+F+R ERAQKE+EDE+R E+
Sbjct: 1    MSLKTTFPFPIFAPQVPSH----RPATEVRFSRWNNANAERFLRRERAQKEIEDEIRRER 56

Query: 2169 RFDSAHNIAHNYNP--------APPHRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 2014
            RFDSA  IA +Y+         A                                     
Sbjct: 57   RFDSASRIADDYDNEATNTSIIATTTGNENFKSIGTPSSPSRSSIPGKASKYSKNPNSDS 116

Query: 2013 XSLHPAFKPLLKPRKFPVKNPETVSGENENKHYVSPNFRIGENGVSYEFPEAPFEYQYSY 1834
               HPAF+ + K  + P   PET +G             +GENGVSY FP APFE+QYSY
Sbjct: 117  KFSHPAFRRVSKVSRLPRVPPETETGVT-----------VGENGVSYTFPNAPFEFQYSY 165

Query: 1833 TETXXXXXXXXXXXLVSPFGPGSIPKPWLGRXXXXXXXXXXPEFDSFQLPPPHKKGVKPV 1654
            TET              PFGP ++P+PW GR          PEFDSF+LPPPHKKGVKPV
Sbjct: 166  TETPKVKPLALREPPFVPFGPSTMPRPWTGRKPLPPSKKKLPEFDSFRLPPPHKKGVKPV 225

Query: 1653 QAPGPFLRGSGPKYMKSREEILGEPLTKEEVNELIEGCKKSQRQLNMGRDGLTHNMLDNI 1474
            Q+PGPFL GSGPKY++SRE+ILGEPLT+EE+ +L++GC KS+RQLNMGRDGLTHNMLDNI
Sbjct: 226  QSPGPFLAGSGPKYVRSREDILGEPLTEEEIKDLVQGCLKSKRQLNMGRDGLTHNMLDNI 285

Query: 1473 HAHWKRRRVCKIKCKGVCTVDMDNVRQQLEEKTGGKVIYNRGGVIYLFRGRNYNFKTRPR 1294
            HAHWKRRRVCKIKCKGVCTVDMDNVRQQLEEKTGG++IY+RGGV+ LFRGRNYN++TRPR
Sbjct: 286  HAHWKRRRVCKIKCKGVCTVDMDNVRQQLEEKTGGRIIYSRGGVLLLFRGRNYNYRTRPR 345

Query: 1293 FPLMLWKPITPVYPRLIKRVPEGLTLEEASEMRKQGRNLTPICKLAKNGVYSDLVNNIRE 1114
            FPLMLWKP+TPVYPRLI+RVPEGLTLEEASEMRK+G NL PICKL KNGVYSDL  N+RE
Sbjct: 346  FPLMLWKPVTPVYPRLIQRVPEGLTLEEASEMRKKGWNLPPICKLGKNGVYSDLAKNVRE 405

Query: 1113 AFEACELVRINCQGLNGSDYRKVGAKLKDLVPCVLISFEYEHILIWRGRYWRSSLPELED 934
            AFE CELVRINCQG+N SDY+K+GAKLKDLVPCVLISFE EHIL+WRGR W+SSL   ED
Sbjct: 406  AFEECELVRINCQGMNKSDYQKIGAKLKDLVPCVLISFENEHILMWRGRDWKSSLVNPED 465

Query: 933  GPKEVQEVKFDSVALAKPVVSA--LSSSVPTVSIVNPN------DLNTSVSSTC------ 796
              +E ++ + D V    P   +  L     T+ + +          N  ++STC      
Sbjct: 466  DSEEARQSEKDCVTATPPSNDSVLLGEHQETLDLCDSESSNMDASCNVPINSTCSLSSGG 525

Query: 795  GNVESK-RISEFSEAGVEDLLSTVNMSSEASEAVLTVQSINGTERSPVHAGYSGDDSEA 622
             N+E K  +S  +E  V+         SEA+   +T+++I+G+     +   + D+S A
Sbjct: 526  ANLEGKDGLSFNTERNVQ--------PSEATNVGVTMKNISGSGTVSDNKAGTADESLA 576



 Score = 94.7 bits (234), Expect = 3e-16
 Identities = 54/127 (42%), Positives = 76/127 (59%)
 Frame = -2

Query: 557 ELVSLSPPWTEGVLLLLKQAVECGRAILLDDHCLDADNVFKMTVAFAKTVPTGPVFRHGP 378
           EL S +   T+GV+LLL QA+E G A++LD   LDAD +++ ++A AKT P GP+F+H P
Sbjct: 625 ELESPTTNCTDGVILLLNQAIENGSAVILDSASLDADIIYERSIALAKTAPRGPIFKHRP 684

Query: 377 KKKAVQRGEKKETNDLELKEAAAVAGTEITVPGXXXXXXXXXXXXXXKDIKADYLNVAPQ 198
           +K  VQ+G+K+ET + E++EA AV   +  V                K +K  Y  V P 
Sbjct: 685 RKVFVQKGDKQETGNSEVEEAVAVLEKKGNV-------EKNTRHQRTKGLKGVYSEVVPH 737

Query: 197 GSLRVDE 177
           GSL VDE
Sbjct: 738 GSLGVDE 744


>ref|XP_002535109.1| conserved hypothetical protein [Ricinus communis]
            gi|223524018|gb|EEF27274.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 748

 Score =  560 bits (1444), Expect(2) = e-173
 Identities = 299/598 (50%), Positives = 377/598 (63%), Gaps = 34/598 (5%)
 Frame = -1

Query: 2325 IQFPIFAPP---------DHHRCRRPATEVRFSRWNNANAEKFIRHERAQKELEDELRFE 2173
            +QFP+F+PP          HHR   P +++ FSRWNNANA +F    RAQKE+E+++R  
Sbjct: 8    VQFPVFSPPLNPNLLSQTQHHR---PPSDIHFSRWNNANAREFNDRRRAQKEIEEDIRRN 64

Query: 2172 KRFDSAHNIAHNYNPAPPHRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLHPAF 1993
            +RF+SA NI  NY+ A  +                                     HPAF
Sbjct: 65   RRFNSAANIIDNYDSATSNENFKSKSIGTPSSPSAPSIPGRKSKYSKPESPTSH--HPAF 122

Query: 1992 KPLLKPRKFPVKNPETVSGENENKHYVSPNFRIGENGVSYEFPEAPFEYQYSYTETXXXX 1813
            + + K  K P+  PE     N +        ++ E+G+S+    APFE++YSYTET    
Sbjct: 123  RSISKITKKPL--PEKPIDRNAD-------VKLSEDGLSFVVDGAPFEFKYSYTETPKAK 173

Query: 1812 XXXXXXXLVSPFGPGSIPKPWLGRXXXXXXXXXXPEFDSFQLPPPHKKGVKPVQAPGPFL 1633
                     SPFGP ++ +PW GR           EFDSF+LPPP KKGVKPVQ PGPFL
Sbjct: 174  PIKLREAPFSPFGPTTMGRPWTGRAPLPPSKKKLREFDSFKLPPPDKKGVKPVQKPGPFL 233

Query: 1632 RGSGPKYMKSREEILGEPLTKEEVNELIEGCKKSQRQLNMGRDGLTHNMLDNIHAHWKRR 1453
             G+GP+Y+ SREEILGEPLT EEV  LIEGC K++RQLNMGRDGLTHNMLDNIHAHWKRR
Sbjct: 234  PGAGPRYVYSREEILGEPLTTEEVKILIEGCLKTRRQLNMGRDGLTHNMLDNIHAHWKRR 293

Query: 1452 RVCKIKCKGVCTVDMDNVRQQLEEKTGGKVIYNRGGVIYLFRGRNYNFKTRPRFPLMLWK 1273
            RVCKIKC GVCTVDMDNV QQLEE+TGGKVIY +GGV+YLFRGRNYN++TRPRFPLMLWK
Sbjct: 294  RVCKIKCMGVCTVDMDNVCQQLEERTGGKVIYRKGGVVYLFRGRNYNYRTRPRFPLMLWK 353

Query: 1272 PITPVYPRLIKRVPEGLTLEEASEMRKQGRNLTPICKLAKNGVYSDLVNNIREAFEACEL 1093
            P+TPVYPRLIKR PEGLTLEEASEMR++GR L PICKLAKNGVY +LV  +REAFE CEL
Sbjct: 354  PVTPVYPRLIKRAPEGLTLEEASEMRRKGRKLIPICKLAKNGVYCNLVKEVREAFEECEL 413

Query: 1092 VRINCQGLNGSDYRKVGAKLKDLVPCVLISFEYEHILIWRGRYWRSSLPE---------- 943
            VRI+CQG+NGSDYRKVGAKLK+LVPC+LISFE+EHIL+WRGR W+SS+ +          
Sbjct: 414  VRIDCQGVNGSDYRKVGAKLKELVPCLLISFEHEHILMWRGRDWKSSMIKPVNDSVEAIG 473

Query: 942  ------------LEDGPKEVQEVKFDSVALAKPVVSALSSSVPTVSIVNPNDL---NTSV 808
                        LED   ++ E+      L+KP +S +          +P+ L   + ++
Sbjct: 474  SDVNSATSIASVLED---QIMEIVSHEDGLSKPDMSTIPVGSMDEQAEHPSILDGTSVAI 530

Query: 807  SSTCGNVESKRISEFSEAGVEDLLSTVNMSSEASEAVLTVQSINGTERSPVHAGYSGD 634
             ++   VE   I+  +E+G    +S   + + A  +   V +++     PV    S +
Sbjct: 531  GASSTTVEMSEINPMTESGSSSAVSESEVINNAVGSESVVNNMDPANEMPVAMSVSSE 588



 Score = 79.7 bits (195), Expect(2) = e-173
 Identities = 41/77 (53%), Positives = 55/77 (71%)
 Frame = -2

Query: 548 SLSPPWTEGVLLLLKQAVECGRAILLDDHCLDADNVFKMTVAFAKTVPTGPVFRHGPKKK 369
           +LS  + + VLLL KQAVE G A++L D  LDAD V++  VAFAK+ P GPVFRH  KK 
Sbjct: 616 NLSVSYADRVLLLWKQAVESGSALILVDADLDADIVYQRAVAFAKSAPPGPVFRHRSKKA 675

Query: 368 AVQRGEKKETNDLELKE 318
           ++++ EK+E+ D E KE
Sbjct: 676 SIRKSEKQESKDSEPKE 692


>emb|CBI28022.3| unnamed protein product [Vitis vinifera]
          Length = 723

 Score =  597 bits (1538), Expect = e-167
 Identities = 308/519 (59%), Positives = 357/519 (68%), Gaps = 4/519 (0%)
 Frame = -1

Query: 2343 MSLKTVIQFPIFAP--PDHHRCRRPATEVRFSRWNNANAEKFIRHERAQKELEDELRFEK 2170
            M+LKT+I FPI AP  P H    RPA+EVRFSRWNNANAE+F   ERAQKE+ED +R E+
Sbjct: 1    MALKTLIPFPILAPSNPSH----RPASEVRFSRWNNANAERFTLRERAQKEIEDNIRRER 56

Query: 2169 RFDSAHNIAHNYNPAPPHRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLHPAFK 1990
            RFDSA  IA + + A   +                                  + HPAF+
Sbjct: 57   RFDSATRIA-DIDDAGTSKEAAAAGTFKSTGTPSSPSKPSIPGKSSKYSKNSKTSHPAFR 115

Query: 1989 PLLKPRKFPVKN--PETVSGENENKHYVSPNFRIGENGVSYEFPEAPFEYQYSYTETXXX 1816
             + +  K P  N  PE   G             IGE+GVSY  P  PFE +YSYTET   
Sbjct: 116  QISRRTKLPGPNISPEAKRG-----------ISIGEDGVSYMVPGVPFELRYSYTETPKV 164

Query: 1815 XXXXXXXXLVSPFGPGSIPKPWLGRXXXXXXXXXXPEFDSFQLPPPHKKGVKPVQAPGPF 1636
                       PFGP ++P+PW GR           EFDSFQLPPP KK VKPVQAPGPF
Sbjct: 165  KPIALREPPFLPFGPDTMPRPWTGRAPLPPSKKKLKEFDSFQLPPPGKKRVKPVQAPGPF 224

Query: 1635 LRGSGPKYMKSREEILGEPLTKEEVNELIEGCKKSQRQLNMGRDGLTHNMLDNIHAHWKR 1456
            L GSGP+Y++SREEILGEPLT+EE+ EL++GC KS+RQLNMGRDGLTHNMLDNIHAHWKR
Sbjct: 225  LPGSGPRYVRSREEILGEPLTEEEIKELVQGCVKSKRQLNMGRDGLTHNMLDNIHAHWKR 284

Query: 1455 RRVCKIKCKGVCTVDMDNVRQQLEEKTGGKVIYNRGGVIYLFRGRNYNFKTRPRFPLMLW 1276
            RRVCKIKCKGVCTVDMDNVRQQLEEKTGGKVIY +GGV++LFRGRNYN++ RPRFPLMLW
Sbjct: 285  RRVCKIKCKGVCTVDMDNVRQQLEEKTGGKVIYGKGGVLFLFRGRNYNYRNRPRFPLMLW 344

Query: 1275 KPITPVYPRLIKRVPEGLTLEEASEMRKQGRNLTPICKLAKNGVYSDLVNNIREAFEACE 1096
            KP+TPVYPRL++R PEGLTLEEA  MRK+GR L PICKLAKNGVY+DLVNN+REAFE CE
Sbjct: 345  KPVTPVYPRLVQRAPEGLTLEEAGAMRKKGRKLIPICKLAKNGVYTDLVNNVREAFEECE 404

Query: 1095 LVRINCQGLNGSDYRKVGAKLKDLVPCVLISFEYEHILIWRGRYWRSSLPELEDGPKEVQ 916
            LVRINCQGLN SDYRK+GAKLKDLVPCVLISFE+EHIL+WRG  W+   P+ EDG KE +
Sbjct: 405  LVRINCQGLNASDYRKIGAKLKDLVPCVLISFEHEHILMWRGSDWKFLHPKPEDGCKEAK 464

Query: 915  EVKFDSVALAKPVVSALSSSVPTVSIVNPNDLNTSVSST 799
            E   +S A   P       S    S ++  D +  +  T
Sbjct: 465  ESDNNSEASIPPPFEGQELSASCSSKISVKDTSLDMLDT 503



 Score = 82.0 bits (201), Expect = 2e-12
 Identities = 55/125 (44%), Positives = 67/125 (53%), Gaps = 5/125 (4%)
 Frame = -2

Query: 536 PWTEGVLLLLKQAVECGRAILLDDHCLDADNVFKMTVAFAKTVPTGPVFRHGPKKKAVQR 357
           P T G+LLLLKQAV+ G A++LD    DAD V+  TVAF+K  P GPVFR  P+K AVQ+
Sbjct: 601 PCTGGLLLLLKQAVDSGSAVVLDGDSCDADIVYGKTVAFSKDAPPGPVFRR-PRKAAVQK 659

Query: 356 GEKKETNDLELKEAAAVAGTEITVPGXXXXXXXXXXXXXXKDIK-----ADYLNVAPQGS 192
            EK+E  DL       V G  +T P               KD K      DY  V  +G+
Sbjct: 660 CEKEEPRDL-------VVGKIVTAPEKGRSQSKSSRNQIAKDFKEGYLDVDYPGVGTRGT 712

Query: 191 LRVDE 177
           L VDE
Sbjct: 713 LGVDE 717


>ref|XP_002280611.1| PREDICTED: CRS2-associated factor 1, chloroplastic [Vitis vinifera]
          Length = 752

 Score =  597 bits (1538), Expect = e-167
 Identities = 308/519 (59%), Positives = 357/519 (68%), Gaps = 4/519 (0%)
 Frame = -1

Query: 2343 MSLKTVIQFPIFAP--PDHHRCRRPATEVRFSRWNNANAEKFIRHERAQKELEDELRFEK 2170
            M+LKT+I FPI AP  P H    RPA+EVRFSRWNNANAE+F   ERAQKE+ED +R E+
Sbjct: 1    MALKTLIPFPILAPSNPSH----RPASEVRFSRWNNANAERFTLRERAQKEIEDNIRRER 56

Query: 2169 RFDSAHNIAHNYNPAPPHRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLHPAFK 1990
            RFDSA  IA + + A   +                                  + HPAF+
Sbjct: 57   RFDSATRIA-DIDDAGTSKEAAAAGTFKSTGTPSSPSKPSIPGKSSKYSKNSKTSHPAFR 115

Query: 1989 PLLKPRKFPVKN--PETVSGENENKHYVSPNFRIGENGVSYEFPEAPFEYQYSYTETXXX 1816
             + +  K P  N  PE   G             IGE+GVSY  P  PFE +YSYTET   
Sbjct: 116  QISRRTKLPGPNISPEAKRG-----------ISIGEDGVSYMVPGVPFELRYSYTETPKV 164

Query: 1815 XXXXXXXXLVSPFGPGSIPKPWLGRXXXXXXXXXXPEFDSFQLPPPHKKGVKPVQAPGPF 1636
                       PFGP ++P+PW GR           EFDSFQLPPP KK VKPVQAPGPF
Sbjct: 165  KPIALREPPFLPFGPDTMPRPWTGRAPLPPSKKKLKEFDSFQLPPPGKKRVKPVQAPGPF 224

Query: 1635 LRGSGPKYMKSREEILGEPLTKEEVNELIEGCKKSQRQLNMGRDGLTHNMLDNIHAHWKR 1456
            L GSGP+Y++SREEILGEPLT+EE+ EL++GC KS+RQLNMGRDGLTHNMLDNIHAHWKR
Sbjct: 225  LPGSGPRYVRSREEILGEPLTEEEIKELVQGCVKSKRQLNMGRDGLTHNMLDNIHAHWKR 284

Query: 1455 RRVCKIKCKGVCTVDMDNVRQQLEEKTGGKVIYNRGGVIYLFRGRNYNFKTRPRFPLMLW 1276
            RRVCKIKCKGVCTVDMDNVRQQLEEKTGGKVIY +GGV++LFRGRNYN++ RPRFPLMLW
Sbjct: 285  RRVCKIKCKGVCTVDMDNVRQQLEEKTGGKVIYGKGGVLFLFRGRNYNYRNRPRFPLMLW 344

Query: 1275 KPITPVYPRLIKRVPEGLTLEEASEMRKQGRNLTPICKLAKNGVYSDLVNNIREAFEACE 1096
            KP+TPVYPRL++R PEGLTLEEA  MRK+GR L PICKLAKNGVY+DLVNN+REAFE CE
Sbjct: 345  KPVTPVYPRLVQRAPEGLTLEEAGAMRKKGRKLIPICKLAKNGVYTDLVNNVREAFEECE 404

Query: 1095 LVRINCQGLNGSDYRKVGAKLKDLVPCVLISFEYEHILIWRGRYWRSSLPELEDGPKEVQ 916
            LVRINCQGLN SDYRK+GAKLKDLVPCVLISFE+EHIL+WRG  W+   P+ EDG KE +
Sbjct: 405  LVRINCQGLNASDYRKIGAKLKDLVPCVLISFEHEHILMWRGSDWKFLHPKPEDGCKEAK 464

Query: 915  EVKFDSVALAKPVVSALSSSVPTVSIVNPNDLNTSVSST 799
            E   +S A   P       S    S ++  D +  +  T
Sbjct: 465  ESDNNSEASIPPPFEGQELSASCSSKISVKDTSLDMLDT 503



 Score = 83.6 bits (205), Expect = 7e-13
 Identities = 56/132 (42%), Positives = 70/132 (53%), Gaps = 5/132 (3%)
 Frame = -2

Query: 557 ELVSLSPPWTEGVLLLLKQAVECGRAILLDDHCLDADNVFKMTVAFAKTVPTGPVFRHGP 378
           ++   S P T G+LLLLKQAV+ G A++LD    DAD V+  TVAF+K  P GPVFR  P
Sbjct: 623 KMTGSSAPCTGGLLLLLKQAVDSGSAVVLDGDSCDADIVYGKTVAFSKDAPPGPVFRR-P 681

Query: 377 KKKAVQRGEKKETNDLELKEAAAVAGTEITVPGXXXXXXXXXXXXXXKDIK-----ADYL 213
           +K AVQ+ EK+E  DL       V G  +T P               KD K      DY 
Sbjct: 682 RKAAVQKCEKEEPRDL-------VVGKIVTAPEKGRSQSKSSRNQIAKDFKEGYLDVDYP 734

Query: 212 NVAPQGSLRVDE 177
            V  +G+L VDE
Sbjct: 735 GVGTRGTLGVDE 746


>ref|XP_008242551.1| PREDICTED: CRS2-associated factor 1, chloroplastic [Prunus mume]
          Length = 748

 Score =  592 bits (1527), Expect = e-166
 Identities = 309/580 (53%), Positives = 379/580 (65%), Gaps = 6/580 (1%)
 Frame = -1

Query: 2343 MSLKTVIQFPIFAP-----PDHHRC-RRPATEVRFSRWNNANAEKFIRHERAQKELEDEL 2182
            M+L      PIFAP     P+H+    RP TEVRF+RWNNANAEKF +  RAQ+E+ED++
Sbjct: 1    MALNLPTSCPIFAPLLNLNPNHNPTPNRPPTEVRFARWNNANAEKFNQRRRAQQEIEDDI 60

Query: 2181 RFEKRFDSAHNIAHNYNPAPPHRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLH 2002
            R ++RFDSA  IA  Y+ A                                        H
Sbjct: 61   RRQRRFDSATRIATIYDSATDTTTTSETFKSIGTPSFPSSPSIPGKKSKYSKNPNPNESH 120

Query: 2001 PAFKPLLKPRKFPVKNPETVSGENENKHYVSPNFRIGENGVSYEFPEAPFEYQYSYTETX 1822
            PAF+ +++P K   K P+      + K     N  +G++G+SY    APFE++YSYTET 
Sbjct: 121  PAFRRIIRPTKLS-KIPKDKGPTVDRK----ANISVGDDGLSYVIDGAPFEFKYSYTETP 175

Query: 1821 XXXXXXXXXXLVSPFGPGSIPKPWLGRXXXXXXXXXXPEFDSFQLPPPHKKGVKPVQAPG 1642
                        +PFGP ++ +PW GR           EFDSFQLPPPHKKGVKPVQ+PG
Sbjct: 176  RVKPLKLREPAYAPFGPTTMARPWTGRAPLPPSKKKLKEFDSFQLPPPHKKGVKPVQSPG 235

Query: 1641 PFLRGSGPKYMKSREEILGEPLTKEEVNELIEGCKKSQRQLNMGRDGLTHNMLDNIHAHW 1462
            P+L GSGPKY+KSR+EILG+PLT EEV EL++GC K++RQLNMGRDG THNMLDNIHAHW
Sbjct: 236  PYLPGSGPKYVKSRDEILGDPLTPEEVKELVKGCIKTRRQLNMGRDGFTHNMLDNIHAHW 295

Query: 1461 KRRRVCKIKCKGVCTVDMDNVRQQLEEKTGGKVIYNRGGVIYLFRGRNYNFKTRPRFPLM 1282
            KRRRVCKIKCKGVCTVDMDNV +Q+EEKTGGK+IY +GGVIYLFRGRNYN+KTRP+FPLM
Sbjct: 296  KRRRVCKIKCKGVCTVDMDNVCEQIEEKTGGKIIYRKGGVIYLFRGRNYNYKTRPQFPLM 355

Query: 1281 LWKPITPVYPRLIKRVPEGLTLEEASEMRKQGRNLTPICKLAKNGVYSDLVNNIREAFEA 1102
            LW+PITPVYPRL++R PEGLTLEEA+EMRK+GRNL PICKL KNGVYS+L  N+REAFE 
Sbjct: 356  LWRPITPVYPRLVQRAPEGLTLEEATEMRKKGRNLIPICKLGKNGVYSELAKNVREAFEE 415

Query: 1101 CELVRINCQGLNGSDYRKVGAKLKDLVPCVLISFEYEHILIWRGRYWRSSLPELEDGPKE 922
            CELVRINC G+NGSDYRK+GAKLKDLVPCVLISFE EHIL+WRGR W+SSLP  E+  KE
Sbjct: 416  CELVRINCTGMNGSDYRKIGAKLKDLVPCVLISFELEHILMWRGREWKSSLPNPENDLKE 475

Query: 921  VQEVKFDSVALAKPVVSALSSSVPTVSIVNPNDLNTSVSSTCGNVESKRISEFSEAGVED 742
            V+    D      P +     S    S V+  D +  + +T  +  S         G  D
Sbjct: 476  VKGSDVDDSTSIAPPLEGQEESTSCASTVSVKDASLEILNT--STPSIGSEVVGAEGSGD 533

Query: 741  LLSTVNMSSEASEAVLTVQSINGTERSPVHAGYSGDDSEA 622
            L  + +   E    V  V ++ GT  +   +    D+S+A
Sbjct: 534  L--SPSQYVEPCATVDRVSAVGGTHVTETISDVEDDESKA 571



 Score = 83.2 bits (204), Expect = 9e-13
 Identities = 56/126 (44%), Positives = 69/126 (54%), Gaps = 4/126 (3%)
 Frame = -2

Query: 542 SPPWTEGVLLLLKQAVECGRAILLDDHCLDADNVFKMTVAFAKTVPTGPVFR-HGPKKKA 366
           S P  E VLLLL +AV  G A++LDD  LDAD +F+  VA A++ P GPVF+ H PKK A
Sbjct: 622 SGPCMENVLLLLNEAVGSGSALILDDSALDADIIFRRAVALAQSAPPGPVFKHHRPKKVA 681

Query: 365 VQRGEKKETNDLELKEAAAVAGTEITVP---GXXXXXXXXXXXXXXKDIKADYLNVAPQG 195
           VQ+  K     +  +EA+     EITVP   G              +D      NV PQG
Sbjct: 682 VQKRIK-----IMKQEASVSEVKEITVPVKRGSEKIQKKDTKVKRIRDFGESLDNVVPQG 736

Query: 194 SLRVDE 177
           SLRVDE
Sbjct: 737 SLRVDE 742


>ref|XP_007203785.1| hypothetical protein PRUPE_ppa001872mg [Prunus persica]
            gi|462399316|gb|EMJ04984.1| hypothetical protein
            PRUPE_ppa001872mg [Prunus persica]
          Length = 750

 Score =  592 bits (1525), Expect = e-166
 Identities = 309/580 (53%), Positives = 378/580 (65%), Gaps = 6/580 (1%)
 Frame = -1

Query: 2343 MSLKTVIQFPIFAP-----PDHHRC-RRPATEVRFSRWNNANAEKFIRHERAQKELEDEL 2182
            M+L      PIFAP     P+H+    RP TEVRF+RWNNANAEKF    RAQ+E+ED++
Sbjct: 1    MALNLPTSCPIFAPLLNLNPNHNPTPNRPPTEVRFARWNNANAEKFNERRRAQQEIEDDI 60

Query: 2181 RFEKRFDSAHNIAHNYNPAPPHRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLH 2002
            R E+RFDSA  IA  Y+ A                                        H
Sbjct: 61   RRERRFDSATRIATIYDSATDTTTTSETFKSVGTPSFPSSPSIPGKKSKYSKNPNPKESH 120

Query: 2001 PAFKPLLKPRKFPVKNPETVSGENENKHYVSPNFRIGENGVSYEFPEAPFEYQYSYTETX 1822
            PAF+ +++P K   K P+      + K     N  +G++G+SY    APFE++YSYTET 
Sbjct: 121  PAFRRIIRPTKLS-KIPKDKGPTVDRK----ANISVGDDGLSYVIDGAPFEFKYSYTETP 175

Query: 1821 XXXXXXXXXXLVSPFGPGSIPKPWLGRXXXXXXXXXXPEFDSFQLPPPHKKGVKPVQAPG 1642
                        +PFGP ++ +PW GR           EFDSFQLPPPHKKGVKPVQ+PG
Sbjct: 176  KVKPLKLREPAYAPFGPTTMARPWTGRAPLPPSKKKLKEFDSFQLPPPHKKGVKPVQSPG 235

Query: 1641 PFLRGSGPKYMKSREEILGEPLTKEEVNELIEGCKKSQRQLNMGRDGLTHNMLDNIHAHW 1462
            P+L GSGPKY+KSR+EILG+PLT EEV EL++GC K++RQLNMGRDG THNMLDNIHAHW
Sbjct: 236  PYLPGSGPKYVKSRDEILGDPLTPEEVKELVKGCIKTRRQLNMGRDGFTHNMLDNIHAHW 295

Query: 1461 KRRRVCKIKCKGVCTVDMDNVRQQLEEKTGGKVIYNRGGVIYLFRGRNYNFKTRPRFPLM 1282
            KRRRVCKIKCKGVCTVDMDNV +Q+EEKTGGK+IY +GGVIYLFRGRNYN+KTRP+FPLM
Sbjct: 296  KRRRVCKIKCKGVCTVDMDNVCEQIEEKTGGKIIYRKGGVIYLFRGRNYNYKTRPQFPLM 355

Query: 1281 LWKPITPVYPRLIKRVPEGLTLEEASEMRKQGRNLTPICKLAKNGVYSDLVNNIREAFEA 1102
            LW+PITPVYPRL++R PEGLTLEEA+EMRK+GRNL PICKL KNGVYS+L  N REAFE 
Sbjct: 356  LWRPITPVYPRLVQRAPEGLTLEEATEMRKKGRNLIPICKLGKNGVYSELAKNAREAFEE 415

Query: 1101 CELVRINCQGLNGSDYRKVGAKLKDLVPCVLISFEYEHILIWRGRYWRSSLPELEDGPKE 922
            CELVRINC G+NGSDYRK+GAKLKDLVPCVLISFE EHIL+WRGR W+SS+P  E+  KE
Sbjct: 416  CELVRINCTGMNGSDYRKIGAKLKDLVPCVLISFELEHILMWRGREWKSSIPYPENDLKE 475

Query: 921  VQEVKFDSVALAKPVVSALSSSVPTVSIVNPNDLNTSVSSTCGNVESKRISEFSEAGVED 742
            V+    D      P +     S    S V+  D +  + +T        +    E+G  D
Sbjct: 476  VKGSDVDDSTSIAPPLEGQEESTSCASTVSVKDASLEILNTSTPSIGSEVVGAEESG--D 533

Query: 741  LLSTVNMSSEASEAVLTVQSINGTERSPVHAGYSGDDSEA 622
            L  + +   E    V  V ++ GT  +   +    D+S+A
Sbjct: 534  L--SPSQYVEPCATVDGVSAVGGTHVTETISDVEDDESKA 571



 Score = 82.8 bits (203), Expect = 1e-12
 Identities = 56/126 (44%), Positives = 69/126 (54%), Gaps = 4/126 (3%)
 Frame = -2

Query: 542 SPPWTEGVLLLLKQAVECGRAILLDDHCLDADNVFKMTVAFAKTVPTGPVFR-HGPKKKA 366
           S P  E VLLLL +AV  G A++LDD  LDAD +F+  VA A++ P GPVF+ H PKK A
Sbjct: 624 SGPCMENVLLLLNEAVGSGSALILDDSALDADIIFQRAVALAQSAPPGPVFKHHRPKKVA 683

Query: 365 VQRGEKKETNDLELKEAAAVAGTEITVP---GXXXXXXXXXXXXXXKDIKADYLNVAPQG 195
           VQ+  K     +  +EA+     EITVP   G              +D      NV PQG
Sbjct: 684 VQKRIK-----IMKQEASVSEVKEITVPVKRGSEKIQMKDTKVKRTRDFGESLDNVVPQG 738

Query: 194 SLRVDE 177
           SLRVDE
Sbjct: 739 SLRVDE 744


>ref|XP_010095379.1| CRS2-associated factor 1 [Morus notabilis]
            gi|587870515|gb|EXB59798.1| CRS2-associated factor 1
            [Morus notabilis]
          Length = 792

 Score =  589 bits (1518), Expect = e-165
 Identities = 316/600 (52%), Positives = 391/600 (65%), Gaps = 27/600 (4%)
 Frame = -1

Query: 2343 MSLKTVIQFPIFAP------PDHHRCRRPATEVRFSRWNNANAEKFIRHERAQKELEDEL 2182
            M+LK  I FPIFAP      P +HR     TE+RFSRWNNANAEKF    R  +++ED++
Sbjct: 1    MALKLPIPFPIFAPHLNPSPPQYHRL---PTELRFSRWNNANAEKFNERRRTLQQIEDDI 57

Query: 2181 RFEKRFDSAHNIAHNYNPAPPHRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXS-- 2008
            R ++RFDSA  I+   + A P                                    +  
Sbjct: 58   RRQRRFDSATRISDIPDSASPSTAGSATGEFFKSIGTPSSPSRPSIPGKKSKYSKNPNPS 117

Query: 2007 ----LHPAFKPLLKPRKFPVKNPETVSGENENKHYVS--PNFRIGENGVSYEFPEAPFEY 1846
                 HPAF+PL + RK  VK    +SG  ++K  V    + R+GE+GVSY    APFE+
Sbjct: 118  FDSRSHPAFRPLRRVRKIAVKE---LSGLPKDKRDVERKADVRVGEDGVSYVIDGAPFEF 174

Query: 1845 QYSYTETXXXXXXXXXXXLVSPFGPGSIPKPWLGRXXXXXXXXXXPEFDSFQLPPPHKKG 1666
            +YSYTET             +PFGP ++P+PW GR           EFDSF+L PPHKKG
Sbjct: 175  KYSYTETPKAQPVKLREAPYAPFGPTTMPRPWTGRAPLPPSKKKLKEFDSFRLSPPHKKG 234

Query: 1665 VKPVQAPGPFLRGSGPKYMKSREEILGEPLTKEEVNELIEGCKKSQRQLNMGRDGLTHNM 1486
            VKPVQAPGPFL GSGPKY+ SREEILGEPLT+EE+ +LIEGC+K++RQ+NMGRDGLTHNM
Sbjct: 235  VKPVQAPGPFLPGSGPKYVMSREEILGEPLTEEEIKDLIEGCRKTKRQMNMGRDGLTHNM 294

Query: 1485 LDNIHAHWKRRRVCKIKCKGVCTVDMDNVRQQLEEKTGGKVIYNRGGVIYLFRGRNYNFK 1306
            LDNIHAHWKRRRVCKIKCKGVCTVDMDNV++QLEE+TGGK+IY +GGVI+LFRGRNYN++
Sbjct: 295  LDNIHAHWKRRRVCKIKCKGVCTVDMDNVKEQLEERTGGKIIYGKGGVIFLFRGRNYNYR 354

Query: 1305 TRPRFPLMLWKPITPVYPRLIKRVPEGLTLEEASEMRKQGRNLTPICKLAKNGVYSDLVN 1126
            TRPRFPLMLWKP+TPVYPRL+KRVPEGLTLEEA EMRK+G  L PICKL KNGVY +LV 
Sbjct: 355  TRPRFPLMLWKPVTPVYPRLVKRVPEGLTLEEAKEMRKKGHKLMPICKLGKNGVYHNLVK 414

Query: 1125 NIREAFEACELVRINCQGLNGSDYRKVGAKLKDLVPCVLISFEYEHILIWRGRYWRSSLP 946
            ++REAFE CELVRINCQG+NGSDYRK+GAKLKDLVPCVL+SF +EHILIWRG  W+SSLP
Sbjct: 415  HVREAFEECELVRINCQGMNGSDYRKIGAKLKDLVPCVLLSFAFEHILIWRGCDWKSSLP 474

Query: 945  ELEDGPKEVQEVKFDSVALAKPVVSALSSSVPTVSIVNPNDLNTSVSSTCGNVESK---- 778
            +L    K+  E K   V +   V  ++      +S  + ND +  + ST   +       
Sbjct: 475  KL---VKDRDEAKESDVQIVTSVAPSVEGEEVAMSTGSVNDASLELISTTSTLNRSHEVI 531

Query: 777  ----RISEFSEAGVEDLLSTVNMSSE----ASEAVLTVQ-SINGTERSPVHAGYSGDDSE 625
                R    S   VE   +T ++S+E    A+E +  VQ  ++       +  Y+G  SE
Sbjct: 532  GTEGREDSSSVEYVEPCSTTGDVSNEIKTFATEKISDVQIPVDDRLGDTSNTSYNGTTSE 591



 Score = 72.8 bits (177), Expect = 1e-09
 Identities = 50/133 (37%), Positives = 68/133 (51%), Gaps = 10/133 (7%)
 Frame = -2

Query: 545  LSPPWTEGVLLLLKQAVECGRAILLDDHCLDADNVFKMTVAFAKTVPTGPVFRHGPKK-- 372
            L+ P TEGVL LL+QAV  G AI+LD+  LD+D V++ TVAF+++ P GPVF+  P+K  
Sbjct: 660  LNAPCTEGVLSLLQQAVVGGLAIILDEDNLDSDVVYQRTVAFSQSAPPGPVFKGRPRKML 719

Query: 371  --------KAVQRGEKKETNDLELKEAAAVAGTEITVPGXXXXXXXXXXXXXXKDIKADY 216
                      V   EK++T D   KE   +   E +                  ++    
Sbjct: 720  PKKVMVKNSEVLENEKQDTEDFAPKEIRTIYVKEGSGKKASKARRRKDFGENLDNV---- 775

Query: 215  LNVAPQGSLRVDE 177
              V PQGSLRVDE
Sbjct: 776  --VVPQGSLRVDE 786


>ref|XP_009352524.1| PREDICTED: CRS2-associated factor 1, chloroplastic isoform X1 [Pyrus
            x bretschneideri] gi|694322847|ref|XP_009352526.1|
            PREDICTED: CRS2-associated factor 1, chloroplastic
            isoform X2 [Pyrus x bretschneideri]
          Length = 773

 Score =  580 bits (1494), Expect = e-162
 Identities = 305/549 (55%), Positives = 366/549 (66%), Gaps = 23/549 (4%)
 Frame = -1

Query: 2343 MSLKTVIQFPIFAP---------PDHHRCRRPATEVRFSRWNNANAEKFIRHERAQKELE 2191
            M+L      PIFAP         P+ HR   P TEVRF+RWNNANAEKF +  RAQ+E++
Sbjct: 1    MALNLPTSCPIFAPLLNPSPTNNPNQHR---PPTEVRFARWNNANAEKFNQRRRAQQEIQ 57

Query: 2190 DELRFEKRFDSAHNIA-------HNYNPAPPHRXXXXXXXXXXXXXXXXXXXXXXXXXXX 2032
            D++R E+RF+SA  IA            A                               
Sbjct: 58   DDIRRERRFESATRIATLSDSTTDTTTAAANATTSSETYKSIGTPSYPSSPSIQGKKSKY 117

Query: 2031 XXXXXXXSLHPAFKPLLKPRKFPVKNPETVSGENENKHYVSPNFRIGENGVSYEFPEAPF 1852
                     HPAF+ +++P K   K P       + K  +S    IG++G+SY    APF
Sbjct: 118  SKNPNPTDSHPAFRRIIRPTKLS-KIPREKKPAVDRKADIS----IGDDGLSYVIDGAPF 172

Query: 1851 EYQYSYTETXXXXXXXXXXXLVSPFGPGSIPKPWLGRXXXXXXXXXXPEFDSFQLPPPHK 1672
            E++YSYTET             +PFGP ++ +PW GR           EFDSFQLPPPHK
Sbjct: 173  EFKYSYTETPKIKPIKLREPPFAPFGPTTMDRPWTGRAPLPASKKKLKEFDSFQLPPPHK 232

Query: 1671 KGVKPVQAPGPFLRGSGPKYMKSREEILGEPLTKEEVNELIEGCKKSQRQLNMGRDGLTH 1492
            KGVKPVQ+PGP+L GSGPKY+KSREEILG+PLT EEV EL++GC K++RQLNMGRDGLTH
Sbjct: 233  KGVKPVQSPGPYLPGSGPKYVKSREEILGDPLTVEEVKELVKGCIKTKRQLNMGRDGLTH 292

Query: 1491 NMLDNIHAHWKRRRVCKIKCKGVCTVDMDNVRQQLEEKTGGKVIYNRGGVIYLFRGRNYN 1312
            NMLDNIHAHWKRRRVCKIKCKGVCTVDM+NV +QLEE+TGGK+IY +GGVIYLFRGRNYN
Sbjct: 293  NMLDNIHAHWKRRRVCKIKCKGVCTVDMENVSEQLEERTGGKIIYRKGGVIYLFRGRNYN 352

Query: 1311 FKTRPRFPLMLWKPITPVYPRLIKRVPEGLTLEEASEMRKQGRNLTPICKLAKNGVYSDL 1132
            +KTRP+FPLMLW+PITPVYPRLI+R PEGLT+EEASEMRK+GRNL PICKL KNGVYS+L
Sbjct: 353  YKTRPKFPLMLWRPITPVYPRLIQRAPEGLTVEEASEMRKKGRNLIPICKLGKNGVYSEL 412

Query: 1131 VNNIREAFEACELVRINCQGLNGSDYRKVGAKLKDLVPCVLISFEYEHILIWRGRYWRSS 952
            V N+REAFE CELVRINCQG+N SDYRK+G KLKDLVPCVL+SFE EHIL+WRG  W+SS
Sbjct: 413  VKNVREAFEECELVRINCQGMNASDYRKIGGKLKDLVPCVLLSFELEHILLWRGWEWKSS 472

Query: 951  LPELEDGPKEVQE------VKFDSVALAKPVVSAL-SSSVPTVSIVNPNDLNTSVSSTCG 793
            LP  E+  KEV+E        F S + A  VV A  S  +     V P+     VS+  G
Sbjct: 473  LPNPENDLKEVKESDVNGSTSFASTSCASEVVGAEGSKDLSPSQYVGPHATVDGVSTVGG 532

Query: 792  NVESKRISE 766
              E++ IS+
Sbjct: 533  TCETEPISD 541



 Score = 78.6 bits (192), Expect = 2e-11
 Identities = 55/133 (41%), Positives = 72/133 (54%), Gaps = 6/133 (4%)
 Frame = -2

Query: 557  ELVSLSPPWTEGVLLLLKQAVECGRAILLDDHCLDADNVFKMTVAFAKTVPTGPVFRH-G 381
            E   LS P TE VLLLL +AV  G A++LD+  L+AD +++  VAFA++ P GPVF+H  
Sbjct: 642  EPAKLSAPCTENVLLLLNEAVGSGSALILDESSLNADIIYQRAVAFAQSAPPGPVFKHQR 701

Query: 380  PKKKAVQRG---EKKETNDLELKE--AAAVAGTEITVPGXXXXXXXXXXXXXXKDIKADY 216
            PKK AV +     K++  D E+KE   +A  G+E    G                     
Sbjct: 702  PKKVAVLKRVKVVKQDAGDPEVKEITVSAKRGSEKIQKGSRVKRIRDFGENLVD------ 755

Query: 215  LNVAPQGSLRVDE 177
             NV PQGSLRVDE
Sbjct: 756  -NVVPQGSLRVDE 767


>gb|KDO66499.1| hypothetical protein CISIN_1g003220mg [Citrus sinensis]
          Length = 838

 Score =  579 bits (1492), Expect = e-162
 Identities = 298/548 (54%), Positives = 370/548 (67%), Gaps = 11/548 (2%)
 Frame = -1

Query: 2343 MSLKTVIQFPIFAPPDHHRCR--------RPATEVRFSRWNNANAEKFIRHERAQKELED 2188
            M+LK +I FPIF+PP +H           RPATE+RFSRWNNANAE+F +  RAQ+E+ED
Sbjct: 1    MALKLIIPFPIFSPPPNHNPNLNPNPPNHRPATEIRFSRWNNANAEEFNQRRRAQQEIED 60

Query: 2187 ELRFEKRFDSAHNIAHNYNPAPPHRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXS 2008
            ++R  +RFDSA  I  +Y+ +                                      S
Sbjct: 61   DIRRHRRFDSATKITQSYDSSTSTATNGVAFKSAGTPSSPSRPSIPGRKSKYSKPATNSS 120

Query: 2007 L-HPAFKPLLKPRKFPVKNPETVSGENENKHYVSPNFRIGENGVSYEFPEAPFEYQYSYT 1831
            + HPAF+ + K  K   K+PE  +    N         I E+G+SY    APFE++YSYT
Sbjct: 121  VDHPAFRKISKREKTTNKSPEKPAASKSN-------ISITEDGLSYVIDGAPFEFKYSYT 173

Query: 1830 ETXXXXXXXXXXXLVSPFGPGSIPKPWLGRXXXXXXXXXXPEFDSFQLPPPHKKGVKPVQ 1651
            E              SPFGP ++ +PW GR           EFDSFQLPPP+KKGVKPVQ
Sbjct: 174  EAPKAKPLKLREAAFSPFGPTTMGRPWTGRAPLPPSKKKLKEFDSFQLPPPNKKGVKPVQ 233

Query: 1650 APGPFLRGSGPKYMKSREEILGEPLTKEEVNELIEGCKKSQRQLNMGRDGLTHNMLDNIH 1471
             PGP+L G+GP+Y+ +REEILGEPLT +EV EL+E  K+S RQLNMGRDGLTHNMLDNIH
Sbjct: 234  KPGPYLPGTGPRYVSTREEILGEPLTADEVRELVESAKRSSRQLNMGRDGLTHNMLDNIH 293

Query: 1470 AHWKRRRVCKIKCKGVCTVDMDNVRQQLEEKTGGKVIYNRGGVIYLFRGRNYNFKTRPRF 1291
            AHWKRRR CKIKCKGVCTVDMDNV +QLEE+TGGK+IY RGGV+YLFRGRNYN+++RPRF
Sbjct: 294  AHWKRRRACKIKCKGVCTVDMDNVCEQLEERTGGKIIYRRGGVLYLFRGRNYNYRSRPRF 353

Query: 1290 PLMLWKPITPVYPRLIKRVPEGLTLEEASEMRKQGRNLTPICKLAKNGVYSDLVNNIREA 1111
            PLMLWKP+TPVYPRLI++VP+GLTLEEA+EMRK+GR L PICKL KNGVY DL  N+REA
Sbjct: 354  PLMLWKPVTPVYPRLIQQVPDGLTLEEATEMRKKGRKLIPICKLGKNGVYCDLAKNVREA 413

Query: 1110 FEACELVRINCQGLNGSDYRKVGAKLKDLVPCVLISFEYEHILIWRGRYWRSSLPELEDG 931
            FE CELVRINCQG+NGSDYRK+GAKL+DLVPCVLISFE EHIL+WRG+ W+SS+ +  + 
Sbjct: 414  FEVCELVRINCQGMNGSDYRKIGAKLRDLVPCVLISFEREHILMWRGQEWKSSILKPGND 473

Query: 930  PKEVQEVKFD-SVALAKPVV-SALSSSVPTVSIVNPNDLNTSVSSTCGNVESKRISEFSE 757
             ++ +E K D S+++A P   +  + S+  + +V    LNT  SS    +  K   E   
Sbjct: 474  SEDAKESKVDGSISVAPPTAGNGSAPSLTQMLLVEGGSLNTFNSS----ISPKGYEEVQS 529

Query: 756  AGVEDLLS 733
            A  E+L S
Sbjct: 530  ALRENLSS 537



 Score = 80.5 bits (197), Expect = 6e-12
 Identities = 49/127 (38%), Positives = 74/127 (58%), Gaps = 1/127 (0%)
 Frame = -2

Query: 554  LVSLSPPWTEGVLLLLKQAVECGRAILLDDHCLDADNVFKMTVAFAKTVPTGPVFRHGPK 375
            L  L  P  E VL L++QAVE G A++LDD  LDAD++++ +VAFAK+ P GPVF+   +
Sbjct: 708  LTRLHGPSLEIVLHLMRQAVENGSALVLDDATLDADSIYERSVAFAKSAPPGPVFQQRSR 767

Query: 374  KKAVQRGEKKETNDLELKEAAAVAGTEITVPGXXXXXXXXXXXXXXKDIKADY-LNVAPQ 198
            K A+Q+GEKKE   L++K    V    ++                  +I+    + ++PQ
Sbjct: 768  KIAIQKGEKKEAGHLKMKR--EVPNMVVSENRGNVRQSNRKKTKNSDEIEHGLDVVLSPQ 825

Query: 197  GSLRVDE 177
            GSL++DE
Sbjct: 826  GSLKIDE 832