BLASTX nr result
ID: Forsythia22_contig00008927
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Forsythia22_contig00008927
(545 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AFB73912.1| polyprotein [Citrus sinensis] 107 1e-38
gb|AFB73911.1| polyprotein [Citrus sinensis] 107 2e-38
dbj|BAD34493.1| Gag-Pol [Ipomoea batatas] 101 2e-36
gb|ACL97383.1| Gag-Pol polyprotein [Medicago truncatula] 102 5e-36
gb|ACL97384.1| Gag-Pol polyprotein [Medicago truncatula] 102 5e-36
emb|CDY02901.1| BnaC04g25850D [Brassica napus] 105 1e-35
gb|ACL97386.1| Gag-Pol polyprotein [Medicago truncatula] 103 2e-35
gb|ACL97385.1| Gag-Pol polyprotein [Medicago truncatula] 102 2e-35
gb|ACL97387.1| Gag-Pol polyprotein [Lotus japonicus] 91 9e-31
emb|CAJ76058.1| gag protein [Cucumis melo] 99 7e-25
gb|EXX55164.1| hypothetical protein RirG_227800 [Rhizophagus irr... 65 2e-16
emb|CAN72567.1| hypothetical protein VITISV_044177 [Vitis vinifera] 60 2e-14
ref|XP_007038204.1| Transducin/WD40 repeat-like superfamily prot... 59 1e-13
ref|XP_006432011.1| hypothetical protein CICLE_v10003098mg [Citr... 64 2e-13
gb|KHN13199.1| Retrovirus-related Pol polyprotein from transposo... 56 2e-13
gb|KHN13198.1| Retrovirus-related Pol polyprotein from transposo... 56 4e-13
gb|AAK29467.1| polyprotein-like [Solanum chilense] 64 5e-13
gb|ABA96825.1| retrotransposon protein, putative, Ty1-copia subc... 59 1e-12
ref|XP_007028624.1| Uncharacterized protein TCM_024518 [Theobrom... 57 1e-12
sp|P10978.1|POLX_TOBAC RecName: Full=Retrovirus-related Pol poly... 65 4e-12
>gb|AFB73912.1| polyprotein [Citrus sinensis]
Length = 1309
Score = 107 bits (266), Expect(2) = 1e-38
Identities = 51/74 (68%), Positives = 66/74 (89%)
Frame = -1
Query: 227 LAN*VLSNIEEKTTAKEIWETLTKLYEAKSIHNKIFLERRLKTLQMAESTSVTNHINTLN 48
LA+ VLS++ EK TAKEIW+TLTKLYEAKS+HNKIFL+R+L TL+MAEST VT+HINTL
Sbjct: 62 LADGVLSSVAEKNTAKEIWDTLTKLYEAKSLHNKIFLKRKLYTLRMAESTMVTDHINTLK 121
Query: 47 TLFAKLSNMGYKID 6
TLF++L+ +G+ I+
Sbjct: 122 TLFSQLTTLGHNIE 135
Score = 79.3 bits (194), Expect(2) = 1e-38
Identities = 37/58 (63%), Positives = 47/58 (81%)
Frame = -3
Query: 423 MGTKLEIEKFNGNNFSLWKMKMKAILTKEDC*EAIGEKPSEITNDSKWKNMNNSAIAN 250
M K EIEKFNGNNFSLWKMKMKA+L K +C AIGE+P EIT+D KW ++++AI++
Sbjct: 1 MAAKYEIEKFNGNNFSLWKMKMKAVLRKNNCLAAIGERPMEITDD-KWNEVDSNAISD 57
>gb|AFB73911.1| polyprotein [Citrus sinensis]
Length = 1309
Score = 107 bits (266), Expect(2) = 2e-38
Identities = 51/74 (68%), Positives = 66/74 (89%)
Frame = -1
Query: 227 LAN*VLSNIEEKTTAKEIWETLTKLYEAKSIHNKIFLERRLKTLQMAESTSVTNHINTLN 48
LA+ VLS++ EK TAKEIW+TLTKLYEAKS+HNKIFL+R+L TL+MAEST VT+HINTL
Sbjct: 62 LADGVLSSVAEKNTAKEIWDTLTKLYEAKSLHNKIFLKRKLYTLRMAESTMVTDHINTLK 121
Query: 47 TLFAKLSNMGYKID 6
TLF++L+ +G+ I+
Sbjct: 122 TLFSQLTTLGHNIE 135
Score = 79.0 bits (193), Expect(2) = 2e-38
Identities = 37/58 (63%), Positives = 46/58 (79%)
Frame = -3
Query: 423 MGTKLEIEKFNGNNFSLWKMKMKAILTKEDC*EAIGEKPSEITNDSKWKNMNNSAIAN 250
M K EIEKFNGNNFSLWKMKMKA+L K +C AIGE+P EIT+D KW ++ +AI++
Sbjct: 1 MAAKYEIEKFNGNNFSLWKMKMKAVLRKNNCLAAIGERPMEITDD-KWNEVDGNAISD 57
>dbj|BAD34493.1| Gag-Pol [Ipomoea batatas]
Length = 1298
Score = 101 bits (251), Expect(2) = 2e-36
Identities = 48/74 (64%), Positives = 65/74 (87%)
Frame = -1
Query: 227 LAN*VLSNIEEKTTAKEIWETLTKLYEAKSIHNKIFLERRLKTLQMAESTSVTNHINTLN 48
+A+ VLS+IEEK TA EIW+ L +LYEAKS+HNKIFL+R+L TL+M+ESTSVT H+NTLN
Sbjct: 63 IADGVLSSIEEKKTANEIWDHLNRLYEAKSLHNKIFLKRKLYTLRMSESTSVTEHLNTLN 122
Query: 47 TLFAKLSNMGYKID 6
TLF++L+++ KI+
Sbjct: 123 TLFSQLTSLSCKIE 136
Score = 78.2 bits (191), Expect(2) = 2e-36
Identities = 37/64 (57%), Positives = 46/64 (71%)
Frame = -3
Query: 423 MGTKLEIEKFNGNNFSLWKMKMKAILTKEDC*EAIGEKPSEITNDSKWKNMNNSAIAN*P 244
M K EIEKFNG NFSLWK+K+KAIL K++C AI E+P + T+D KW MN A+A
Sbjct: 1 MAAKFEIEKFNGKNFSLWKLKVKAILRKDNCLAAISERPVDFTDDKKWSEMNEDAMA--- 57
Query: 243 NLYL 232
+LYL
Sbjct: 58 DLYL 61
>gb|ACL97383.1| Gag-Pol polyprotein [Medicago truncatula]
Length = 1305
Score = 102 bits (253), Expect(2) = 5e-36
Identities = 50/73 (68%), Positives = 63/73 (86%)
Frame = -1
Query: 227 LAN*VLSNIEEKTTAKEIWETLTKLYEAKSIHNKIFLERRLKTLQMAESTSVTNHINTLN 48
+A+ VLS+I EK TAKEIW+TL KLYE KS+HN+IFL+RRL TL+M ESTSVT+HINTLN
Sbjct: 62 MADSVLSSIAEKKTAKEIWDTLIKLYEVKSLHNRIFLKRRLYTLRMGESTSVTDHINTLN 121
Query: 47 TLFAKLSNMGYKI 9
TLF++L+ +KI
Sbjct: 122 TLFSQLTASDFKI 134
Score = 75.9 bits (185), Expect(2) = 5e-36
Identities = 34/58 (58%), Positives = 47/58 (81%)
Frame = -3
Query: 423 MGTKLEIEKFNGNNFSLWKMKMKAILTKEDC*EAIGEKPSEITNDSKWKNMNNSAIAN 250
M K EIEKFNG NFSLWK+K++AIL K++C +AI +P++IT D KWK M+++A+AN
Sbjct: 1 MAAKFEIEKFNGRNFSLWKLKIRAILRKDNCLDAIDGRPADIT-DEKWKEMDDNAVAN 57
>gb|ACL97384.1| Gag-Pol polyprotein [Medicago truncatula]
Length = 1305
Score = 102 bits (253), Expect(2) = 5e-36
Identities = 50/73 (68%), Positives = 63/73 (86%)
Frame = -1
Query: 227 LAN*VLSNIEEKTTAKEIWETLTKLYEAKSIHNKIFLERRLKTLQMAESTSVTNHINTLN 48
+A+ VLS+I EK TAKEIW+TL KLYE KS+HN+IFL+RRL TL+M ESTSVT+HINTLN
Sbjct: 62 MADSVLSSIAEKKTAKEIWDTLIKLYEVKSLHNRIFLKRRLYTLRMGESTSVTDHINTLN 121
Query: 47 TLFAKLSNMGYKI 9
TLF++L+ +KI
Sbjct: 122 TLFSQLTASDFKI 134
Score = 75.9 bits (185), Expect(2) = 5e-36
Identities = 34/58 (58%), Positives = 47/58 (81%)
Frame = -3
Query: 423 MGTKLEIEKFNGNNFSLWKMKMKAILTKEDC*EAIGEKPSEITNDSKWKNMNNSAIAN 250
M K EIEKFNG NFSLWK+K++AIL K++C +AI +P++IT D KWK M+++A+AN
Sbjct: 1 MAAKFEIEKFNGRNFSLWKLKIRAILRKDNCLDAIDGRPADIT-DEKWKEMDDNAVAN 57
>emb|CDY02901.1| BnaC04g25850D [Brassica napus]
Length = 265
Score = 105 bits (263), Expect(2) = 1e-35
Identities = 50/74 (67%), Positives = 66/74 (89%)
Frame = -1
Query: 227 LAN*VLSNIEEKTTAKEIWETLTKLYEAKSIHNKIFLERRLKTLQMAESTSVTNHINTLN 48
LA+ VLS+IEEK TAKEIW+ L KLYEAKS+H+KIFL+R+L TL+M ESTS+T HINTLN
Sbjct: 63 LADGVLSSIEEKNTAKEIWDHLAKLYEAKSLHSKIFLKRKLYTLRMGESTSMTEHINTLN 122
Query: 47 TLFAKLSNMGYKID 6
TLF++L+++ YK++
Sbjct: 123 TLFSQLTSLSYKVE 136
Score = 70.9 bits (172), Expect(2) = 1e-35
Identities = 32/58 (55%), Positives = 41/58 (70%)
Frame = -3
Query: 423 MGTKLEIEKFNGNNFSLWKMKMKAILTKEDC*EAIGEKPSEITNDSKWKNMNNSAIAN 250
M K EIEKFNG+NF+L K+KMKAIL K+ C I +P+ TND KW M+ +A+AN
Sbjct: 1 MAAKFEIEKFNGSNFALCKLKMKAILRKDGCLATISARPATYTNDDKWNEMDGNAMAN 58
>gb|ACL97386.1| Gag-Pol polyprotein [Medicago truncatula]
Length = 1305
Score = 103 bits (257), Expect(2) = 2e-35
Identities = 51/73 (69%), Positives = 63/73 (86%)
Frame = -1
Query: 227 LAN*VLSNIEEKTTAKEIWETLTKLYEAKSIHNKIFLERRLKTLQMAESTSVTNHINTLN 48
+A+ VLS+I EK TAKEIW+TL KLYE KS+HN+IFL+RRL TLQM ESTSVT+HINTLN
Sbjct: 62 MADSVLSSIAEKKTAKEIWDTLIKLYEVKSLHNRIFLKRRLYTLQMGESTSVTDHINTLN 121
Query: 47 TLFAKLSNMGYKI 9
TLF++L+ +KI
Sbjct: 122 TLFSQLTASDFKI 134
Score = 72.0 bits (175), Expect(2) = 2e-35
Identities = 33/58 (56%), Positives = 46/58 (79%)
Frame = -3
Query: 423 MGTKLEIEKFNGNNFSLWKMKMKAILTKEDC*EAIGEKPSEITNDSKWKNMNNSAIAN 250
M K EIEKFNG NFSLWK+K++AIL K++C +AI + ++IT D KWK M+++A+AN
Sbjct: 1 MAAKFEIEKFNGRNFSLWKLKIRAILRKDNCLDAIDGRLADIT-DEKWKEMDDNAVAN 57
>gb|ACL97385.1| Gag-Pol polyprotein [Medicago truncatula]
Length = 1305
Score = 102 bits (253), Expect(2) = 2e-35
Identities = 50/73 (68%), Positives = 63/73 (86%)
Frame = -1
Query: 227 LAN*VLSNIEEKTTAKEIWETLTKLYEAKSIHNKIFLERRLKTLQMAESTSVTNHINTLN 48
+A+ VLS+I EK TAKEIW+TL KLYE KS+HN+IFL+RRL TL+M ESTSVT+HINTLN
Sbjct: 62 MADSVLSSIAEKKTAKEIWDTLIKLYEVKSLHNRIFLKRRLYTLRMGESTSVTDHINTLN 121
Query: 47 TLFAKLSNMGYKI 9
TLF++L+ +KI
Sbjct: 122 TLFSQLTASDFKI 134
Score = 73.6 bits (179), Expect(2) = 2e-35
Identities = 33/58 (56%), Positives = 46/58 (79%)
Frame = -3
Query: 423 MGTKLEIEKFNGNNFSLWKMKMKAILTKEDC*EAIGEKPSEITNDSKWKNMNNSAIAN 250
M K EIEKFNG FSLWK+K++AIL K++C +AI +P++IT D KWK M+++A+AN
Sbjct: 1 MAAKFEIEKFNGRKFSLWKLKIRAILRKDNCLDAIDGRPADIT-DEKWKEMDDNAVAN 57
>gb|ACL97387.1| Gag-Pol polyprotein [Lotus japonicus]
Length = 1305
Score = 91.3 bits (225), Expect(2) = 9e-31
Identities = 44/73 (60%), Positives = 60/73 (82%)
Frame = -1
Query: 227 LAN*VLSNIEEKTTAKEIWETLTKLYEAKSIHNKIFLERRLKTLQMAESTSVTNHINTLN 48
+A+ VLS+I EK TAK+IW+TL +LYE KS+HN+IFL+RRL T +M+ESTS+ +HIN LN
Sbjct: 62 VADSVLSSIAEKKTAKKIWDTLIQLYEVKSLHNRIFLKRRLYTFRMSESTSMPDHINNLN 121
Query: 47 TLFAKLSNMGYKI 9
T+FA+LS + I
Sbjct: 122 TMFAQLSASDFTI 134
Score = 68.9 bits (167), Expect(2) = 9e-31
Identities = 33/58 (56%), Positives = 46/58 (79%)
Frame = -3
Query: 423 MGTKLEIEKFNGNNFSLWKMKMKAILTKEDC*EAIGEKPSEITNDSKWKNMNNSAIAN 250
M K EI KFNG+NFSLWK+K+KAIL K++C AI +P++IT+D K K M+++A+AN
Sbjct: 1 MAAKFEIPKFNGSNFSLWKLKIKAILRKDNCLPAIDGRPADITDD-KRKEMDDNAVAN 57
>emb|CAJ76058.1| gag protein [Cucumis melo]
Length = 122
Score = 98.6 bits (244), Expect(2) = 7e-25
Identities = 48/74 (64%), Positives = 63/74 (85%)
Frame = -1
Query: 227 LAN*VLSNIEEKTTAKEIWETLTKLYEAKSIHNKIFLERRLKTLQMAESTSVTNHINTLN 48
L + VLS+IEEK AKEIW+ L KLYEAKS+HNKIFL+R+L TL+M+ ST +T H+NTLN
Sbjct: 39 LVDNVLSSIEEKKIAKEIWDHLIKLYEAKSLHNKIFLKRKLYTLRMSGSTLMTEHMNTLN 98
Query: 47 TLFAKLSNMGYKID 6
TLF++L+ +GYKI+
Sbjct: 99 TLFSQLTLLGYKIE 112
Score = 42.0 bits (97), Expect(2) = 7e-25
Identities = 17/34 (50%), Positives = 27/34 (79%)
Frame = -3
Query: 351 ILTKEDC*EAIGEKPSEITNDSKWKNMNNSAIAN 250
I K++C EAI ++P+EIT+D+KW M+ +A+AN
Sbjct: 1 ISRKDNCLEAIDKRPAEITDDNKWNEMDGNAMAN 34
>gb|EXX55164.1| hypothetical protein RirG_227800 [Rhizophagus irregularis DAOM
197198w]
Length = 518
Score = 65.5 bits (158), Expect(2) = 2e-16
Identities = 33/70 (47%), Positives = 47/70 (67%)
Frame = -1
Query: 215 VLSNIEEKTTAKEIWETLTKLYEAKSIHNKIFLERRLKTLQMAESTSVTNHINTLNTLFA 36
V NI ++TTA+ + + LT +YE S NK+FL R L T +M E SVT HIN LN++ +
Sbjct: 70 VAFNIMKETTARGMMDALTNMYEKPSAANKVFLMRELFTTRMNEEGSVTVHINNLNSILS 129
Query: 35 KLSNMGYKID 6
+LS++G K D
Sbjct: 130 RLSSVGIKFD 139
Score = 46.6 bits (109), Expect(2) = 2e-16
Identities = 21/56 (37%), Positives = 37/56 (66%), Gaps = 2/56 (3%)
Frame = -3
Query: 414 KLEIEKFNGNNFSLWKMKMKAILTKEDC*EAIGEKPSEITN--DSKWKNMNNSAIA 253
K+ IEKFNG++FS WKM+++A+L ++D +G+KP ++ + W + + A A
Sbjct: 5 KVVIEKFNGSDFSWWKMQLEALLCQKDLDVVLGDKPEKMEKAAEDAWNSKDKKAKA 60
>emb|CAN72567.1| hypothetical protein VITISV_044177 [Vitis vinifera]
Length = 950
Score = 59.7 bits (143), Expect(2) = 2e-14
Identities = 27/86 (31%), Positives = 50/86 (58%)
Frame = -1
Query: 263 VLLRISRIYIWGLAN*VLSNIEEKTTAKEIWETLTKLYEAKSIHNKIFLERRLKTLQMAE 84
V+ R + LA+ VL + ++TTA +W Y+ KS+ N+++ +R+L TL+M+E
Sbjct: 55 VVSRAHSAILLSLADEVLREVADETTAVGLWRKFESKYQKKSLTNRLYQKRQLHTLKMSE 114
Query: 83 STSVTNHINTLNTLFAKLSNMGYKID 6
V +H+N N + L+ +G K++
Sbjct: 115 GMQVRDHLNNFNRIILDLNGVGVKVE 140
Score = 45.8 bits (107), Expect(2) = 2e-14
Identities = 20/33 (60%), Positives = 28/33 (84%), Gaps = 1/33 (3%)
Frame = -3
Query: 414 KLEIEKFNGNN-FSLWKMKMKAILTKEDC*EAI 319
K E+EKFNG+N F+LWK+KMKA+L ++ C +AI
Sbjct: 5 KFEVEKFNGSNDFTLWKLKMKALLVQQKCAQAI 37
>ref|XP_007038204.1| Transducin/WD40 repeat-like superfamily protein [Theobroma cacao]
gi|508775449|gb|EOY22705.1| Transducin/WD40 repeat-like
superfamily protein [Theobroma cacao]
Length = 1029
Score = 58.9 bits (141), Expect(2) = 1e-13
Identities = 26/79 (32%), Positives = 49/79 (62%)
Frame = -1
Query: 242 IYIWGLAN*VLSNIEEKTTAKEIWETLTKLYEAKSIHNKIFLERRLKTLQMAESTSVTNH 63
+ + L++ VL + ++ +A +W L +Y KS+ N++++++RL TL+M+E TSV H
Sbjct: 186 VILLALSDEVLREVTDEESAAAVWFKLESIYMTKSLTNRLYMKQRLYTLKMSEGTSVNTH 245
Query: 62 INTLNTLFAKLSNMGYKID 6
I+ N + L N+ KI+
Sbjct: 246 IDEFNRVILDLKNIDVKIE 264
Score = 43.5 bits (101), Expect(2) = 1e-13
Identities = 23/49 (46%), Positives = 35/49 (71%), Gaps = 4/49 (8%)
Frame = -3
Query: 417 TKLEIEKFNG-NNFSLWKMKMKAILTKEDC*EAIGEK---PSEITNDSK 283
TK EIEKFNG N+FSLW++KM+A+L ++ +A+ K PS +++ K
Sbjct: 128 TKYEIEKFNGRNDFSLWRVKMRALLVQQGLLKALKGKEHLPSNLSDGEK 176
>ref|XP_006432011.1| hypothetical protein CICLE_v10003098mg [Citrus clementina]
gi|557534133|gb|ESR45251.1| hypothetical protein
CICLE_v10003098mg [Citrus clementina]
Length = 182
Score = 63.9 bits (154), Expect(2) = 2e-13
Identities = 29/68 (42%), Positives = 43/68 (63%)
Frame = -1
Query: 209 SNIEEKTTAKEIWETLTKLYEAKSIHNKIFLERRLKTLQMAESTSVTNHINTLNTLFAKL 30
SN T KE+WE L KLY KSI N+++L+ R TL+M E T + +H++ LN + +L
Sbjct: 51 SNSGSGKTTKELWEKLEKLYRTKSISNRLYLKERFHTLRMTEGTKIFDHLSVLNGIVLEL 110
Query: 29 SNMGYKID 6
+G KI+
Sbjct: 111 EAIGVKIE 118
Score = 38.1 bits (87), Expect(2) = 2e-13
Identities = 19/47 (40%), Positives = 29/47 (61%), Gaps = 1/47 (2%)
Frame = -3
Query: 414 KLEIEKFNGN-NFSLWKMKMKAILTKEDC*EAIGEKPSEITNDSKWK 277
K EIEKF+G NF LW++++K +L + +A+ KPS +N K
Sbjct: 11 KFEIEKFDGRINFGLWQVQVKDVLIQSGLHKALKGKPSPASNSGSGK 57
>gb|KHN13199.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Glycine soja]
Length = 344
Score = 56.2 bits (134), Expect(2) = 2e-13
Identities = 26/87 (29%), Positives = 47/87 (54%)
Frame = -1
Query: 266 IVLLRISRIYIWGLAN*VLSNIEEKTTAKEIWETLTKLYEAKSIHNKIFLERRLKTLQMA 87
+++ + + L + VL I + TA ++W L Y KS+HN++ L+++L T+QM
Sbjct: 54 VIMKKAYSAILLSLGDEVLGEISGEKTADKLWAKLESRYMTKSLHNRLCLKKQLYTMQMH 113
Query: 86 ESTSVTNHINTLNTLFAKLSNMGYKID 6
E S+ HI+ N + L N+ +D
Sbjct: 114 EGESIHKHIDNFNQVVLSLKNIDVAVD 140
Score = 45.4 bits (106), Expect(2) = 2e-13
Identities = 24/49 (48%), Positives = 37/49 (75%), Gaps = 4/49 (8%)
Frame = -3
Query: 417 TKLEIEKFNG-NNFSLWKMKMKAILTKEDC*EAI-GEK--PSEITNDSK 283
TK ++EKF G NNF+LW++KM A+LT+++C A+ GE+ P+E+T K
Sbjct: 4 TKFDVEKFTGKNNFNLWRVKMLALLTQQECELALEGEEMLPAELTAAQK 52
>gb|KHN13198.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Glycine soja]
Length = 341
Score = 55.8 bits (133), Expect(2) = 4e-13
Identities = 25/87 (28%), Positives = 47/87 (54%)
Frame = -1
Query: 266 IVLLRISRIYIWGLAN*VLSNIEEKTTAKEIWETLTKLYEAKSIHNKIFLERRLKTLQMA 87
+++ + + L + VL + + TA ++W L Y KS+HN++ L+++L T+QM
Sbjct: 51 VIMKKAYSAILLSLGDEVLGEVSGEKTADKLWAKLESRYMTKSLHNRLCLKKQLYTMQMH 110
Query: 86 ESTSVTNHINTLNTLFAKLSNMGYKID 6
E S+ HI+ N + L N+ +D
Sbjct: 111 EGESIHKHIDNFNQVVLSLKNIDVAVD 137
Score = 45.1 bits (105), Expect(2) = 4e-13
Identities = 24/49 (48%), Positives = 37/49 (75%), Gaps = 4/49 (8%)
Frame = -3
Query: 417 TKLEIEKFNG-NNFSLWKMKMKAILTKEDC*EAI-GEK--PSEITNDSK 283
TK ++EKF G NNF+LW++KM A+LT+++C A+ GE+ P+E+T K
Sbjct: 1 TKFDVEKFTGKNNFNLWRVKMLALLTQQECELALEGEEMLPAEMTAAQK 49
>gb|AAK29467.1| polyprotein-like [Solanum chilense]
Length = 1328
Score = 64.3 bits (155), Expect(2) = 5e-13
Identities = 30/74 (40%), Positives = 51/74 (68%)
Frame = -1
Query: 227 LAN*VLSNIEEKTTAKEIWETLTKLYEAKSIHNKIFLERRLKTLQMAESTSVTNHINTLN 48
L + V++NI ++ +A IW L LY +K++ NK++L+++L TL M E T+ +H+N LN
Sbjct: 68 LTDDVVNNIVDEESACGIWTKLENLYMSKTLTNKLYLKKQLYTLHMDEGTNFLSHLNVLN 127
Query: 47 TLFAKLSNMGYKID 6
L +L+N+G KI+
Sbjct: 128 GLITQLANLGVKIE 141
Score = 36.2 bits (82), Expect(2) = 5e-13
Identities = 19/58 (32%), Positives = 32/58 (55%), Gaps = 4/58 (6%)
Frame = -3
Query: 420 GTKLEIEKFNGNN--FSLWKMKMKAILTKEDC*EAIG--EKPSEITNDSKWKNMNNSA 259
G K E+ KFNG+ FS+W+ +MK +L ++ +A+G K E W+ ++ A
Sbjct: 3 GVKYEVAKFNGDKPVFSMWQRRMKDLLIQQGLHKALGGKSKKPESMKLEDWEELDEKA 60
>gb|ABA96825.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 424
Score = 59.3 bits (142), Expect(2) = 1e-12
Identities = 27/74 (36%), Positives = 48/74 (64%)
Frame = -1
Query: 227 LAN*VLSNIEEKTTAKEIWETLTKLYEAKSIHNKIFLERRLKTLQMAESTSVTNHINTLN 48
L++ V+ + ++ T+KEIW LT LY +KS+ +K++L+++L LQM E + + H++ N
Sbjct: 68 LSDSVMYQVMDEKTSKEIWVKLTSLYMSKSLTSKLYLKQQLYGLQMQEESDLRKHVDVFN 127
Query: 47 TLFAKLSNMGYKID 6
L LS + K+D
Sbjct: 128 QLVVDLSKLDVKLD 141
Score = 40.0 bits (92), Expect(2) = 1e-12
Identities = 20/56 (35%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Frame = -3
Query: 417 TKLEIEKFNGN-NFSLWKMKMKAILTKEDC*EAIGEKPSEITNDSKWKNMNNSAIA 253
+K E+ KF+G NF LW+M++K +L ++ +A+ E E + KW+ M A A
Sbjct: 7 SKFEVVKFDGTGNFVLWQMRLKDLLAQQGISKALEETMPEKMDAGKWEEMKAQAAA 62
>ref|XP_007028624.1| Uncharacterized protein TCM_024518 [Theobroma cacao]
gi|508717229|gb|EOY09126.1| Uncharacterized protein
TCM_024518 [Theobroma cacao]
Length = 277
Score = 57.0 bits (136), Expect(2) = 1e-12
Identities = 26/74 (35%), Positives = 47/74 (63%)
Frame = -1
Query: 227 LAN*VLSNIEEKTTAKEIWETLTKLYEAKSIHNKIFLERRLKTLQMAESTSVTNHINTLN 48
L++ VL + ++ +A +W L +Y KS+ N++++++RL TL+M+E TSV HI+ N
Sbjct: 69 LSDEVLREVTDEESAAAMWFKLESIYITKSLTNRLYMKQRLYTLKMSEGTSVNTHIDEFN 128
Query: 47 TLFAKLSNMGYKID 6
+ L N+ KI+
Sbjct: 129 RVILDLKNIDVKIE 142
Score = 42.0 bits (97), Expect(2) = 1e-12
Identities = 23/49 (46%), Positives = 34/49 (69%), Gaps = 4/49 (8%)
Frame = -3
Query: 417 TKLEIEKFNG-NNFSLWKMKMKAILTKEDC*EAIGEK---PSEITNDSK 283
TK EIEKFNG N+FSLW++KM A+L ++ +A+ K PS +++ K
Sbjct: 6 TKYEIEKFNGRNDFSLWRVKMCALLVQQGLLKALKGKEHLPSNLSDSEK 54
>sp|P10978.1|POLX_TOBAC RecName: Full=Retrovirus-related Pol polyprotein from transposon
TNT 1-94; Includes: RecName: Full=Protease; Includes:
RecName: Full=Reverse transcriptase; Includes: RecName:
Full=Endonuclease [Nicotiana tabacum]
gi|20045|emb|CAA32025.1| unnamed protein product
[Nicotiana tabacum]
Length = 1328
Score = 65.5 bits (158), Expect(2) = 4e-12
Identities = 29/74 (39%), Positives = 52/74 (70%)
Frame = -1
Query: 227 LAN*VLSNIEEKTTAKEIWETLTKLYEAKSIHNKIFLERRLKTLQMAESTSVTNHINTLN 48
L++ V++NI ++ TA+ IW L LY +K++ NK++L+++L L M+E T+ +H+N N
Sbjct: 67 LSDDVVNNIIDEDTARGIWTRLESLYMSKTLTNKLYLKKQLYALHMSEGTNFLSHLNVFN 126
Query: 47 TLFAKLSNMGYKID 6
L +L+N+G KI+
Sbjct: 127 GLITQLANLGVKIE 140
Score = 32.0 bits (71), Expect(2) = 4e-12
Identities = 16/57 (28%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Frame = -3
Query: 420 GTKLEIEKFNGNN-FSLWKMKMKAILTKEDC*EA--IGEKPSEITNDSKWKNMNNSA 259
G K E+ KFNG+N FS W+ +M+ +L ++ + + K + W +++ A
Sbjct: 3 GVKYEVAKFNGDNGFSTWQRRMRDLLIQQGLHKVLDVDSKKPDTMKAEDWADLDERA 59