BLASTX nr result
ID: Forsythia22_contig00007671
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Forsythia22_contig00007671
(2424 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_011086680.1| PREDICTED: RNA polymerase sigma factor sigB ... 820 0.0
ref|XP_009761599.1| PREDICTED: RNA polymerase sigma factor sigB-... 726 0.0
ref|XP_012849681.1| PREDICTED: RNA polymerase sigma factor sigB ... 724 0.0
ref|XP_009599122.1| PREDICTED: RNA polymerase sigma factor sigB-... 721 0.0
emb|CDP07629.1| unnamed protein product [Coffea canephora] 720 0.0
ref|XP_004229543.1| PREDICTED: RNA polymerase sigma factor sigB ... 717 0.0
ref|XP_006359117.1| PREDICTED: RNA polymerase sigma factor sigB-... 711 0.0
ref|XP_010052665.1| PREDICTED: RNA polymerase sigma factor sigB ... 706 0.0
ref|XP_006484754.1| PREDICTED: RNA polymerase sigma factor sigB-... 697 0.0
gb|KDO49412.1| hypothetical protein CISIN_1g007404mg [Citrus sin... 695 0.0
ref|XP_006437338.1| hypothetical protein CICLE_v10030998mg [Citr... 693 0.0
ref|XP_010661180.1| PREDICTED: RNA polymerase sigma factor sigB ... 692 0.0
ref|XP_010278441.1| PREDICTED: RNA polymerase sigma factor sigB-... 685 0.0
ref|XP_009792606.1| PREDICTED: RNA polymerase sigma factor sigB-... 685 0.0
gb|KHG18437.1| RNA polymerase sigma factor rpoD [Gossypium arbor... 680 0.0
ref|XP_012434812.1| PREDICTED: RNA polymerase sigma factor sigB ... 680 0.0
ref|XP_012070322.1| PREDICTED: RNA polymerase sigma factor sigB ... 679 0.0
ref|XP_010251515.1| PREDICTED: RNA polymerase sigma factor sigB-... 677 0.0
ref|XP_009617776.1| PREDICTED: RNA polymerase sigma factor sigB-... 675 0.0
ref|XP_010052664.1| PREDICTED: RNA polymerase sigma factor sigB ... 674 0.0
>ref|XP_011086680.1| PREDICTED: RNA polymerase sigma factor sigB isoform X1 [Sesamum
indicum]
Length = 613
Score = 820 bits (2118), Expect = 0.0
Identities = 439/615 (71%), Positives = 494/615 (80%), Gaps = 12/615 (1%)
Frame = -2
Query: 2063 MSCLLPQFRCLPDTFSVNFKSQNHSAIHPSKSRDPIYFQTQCILST-------ATTTVLE 1905
MSCLLPQF+C PDTF+VNFKSQ+H++++ SKSR+ F+TQCILST ATTTVL+
Sbjct: 1 MSCLLPQFKCSPDTFAVNFKSQSHTSVYSSKSREATSFRTQCILSTTPPPTLTATTTVLD 60
Query: 1904 LEKLQLPSLEAISSSVPADRS-SKPTRI--TAVLELEKLKLPSLDVHSKSIAANRPWTYI 1734
EKLQL SLEAI + VPADRS S PT TA+L+LE L PSLD H + AAN+PWTY+
Sbjct: 61 FEKLQLSSLEAIPNQVPADRSWSTPTSSAKTAMLDLEGL--PSLDAHPITTAANKPWTYV 118
Query: 1733 GAVGPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAMMVSNRTDTT 1554
GA+ PP AMMVS+ T
Sbjct: 119 GAIAPPSEVTLGANLDTETLLTSEEAVIAAAASEALALAKAAVKVAKDAAMMVSHHKPTK 178
Query: 1553 SDCETTEILLEVDNTLLERNQLAHFAERVDSKESKVTEIGLGENHSASYLLTESD-VEPS 1377
S+ T + +V+ + E+NQLAH AERVD +++KV E+GLGEN+ A++ LTESD VEPS
Sbjct: 179 SNSSATGMFADVNTPIFEKNQLAHLAERVDIRDAKVAEVGLGENYPAAHSLTESDDVEPS 238
Query: 1376 HEELELLEAQLSNSIAVRSNRQTXXXXXXXXXXXXXXANVVSVKSGSTSRKKR-VLQDID 1200
EELE LEAQLS SIAVRS RQT AN+VSVKSGS+SRKKR +QD+D
Sbjct: 239 AEELEFLEAQLSKSIAVRSKRQTERRARRTRAAEKAAANIVSVKSGSSSRKKRSAVQDVD 298
Query: 1199 YSDPLRYLRGTTSSSKLLTAAEEQKLSGGIQDLLKLERLQVELTERYGDQLTFSQWAAAA 1020
YSDPLRYLRGTTSSS+LLTA+EEQ LS GIQ LLKLERLQ+ELT+RYG Q TF+QWAAAA
Sbjct: 299 YSDPLRYLRGTTSSSRLLTASEEQVLSSGIQVLLKLERLQMELTQRYGGQPTFAQWAAAA 358
Query: 1019 GVDQKTLRKRLNYGILCKDKMIKSNIRLVISIAKNYQGVGMNLQDLVQEGCRGLVRGAEK 840
GVDQKTLRK++NYGILCKDKMIKSNIRLVISIAKNYQG GMNLQDLVQEGCRGLVRGAEK
Sbjct: 359 GVDQKTLRKQINYGILCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEK 418
Query: 839 FDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLFNENGRQP 660
FDA+KGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQL++ENGR P
Sbjct: 419 FDATKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHP 478
Query: 659 NNEEVAEATGLSMKRLNAVLLTPKAPRSLDQKIGINQNLKPSEVISDPEAETAEDLLIKE 480
++EEVAEATGLSMKRL+AV+LTPKAPRSLDQKIGINQ+LKPS+VI+DPEAETAEDLLIK+
Sbjct: 479 DDEEVAEATGLSMKRLSAVMLTPKAPRSLDQKIGINQDLKPSDVIADPEAETAEDLLIKQ 538
Query: 479 FMKQDLAKVLDTLNPREKQVIRWRFGLEDGRMKTLQEIGESMGVSRERIRQIESCAFRKL 300
FMKQDLAKVLD+LNPREKQV+ WRFGLEDGRMKTLQEIGE MGVSRERIRQIESCAFRKL
Sbjct: 539 FMKQDLAKVLDSLNPREKQVVIWRFGLEDGRMKTLQEIGELMGVSRERIRQIESCAFRKL 598
Query: 299 KNKKRTKHLQQYVMP 255
KNKKRTKHLQQYVMP
Sbjct: 599 KNKKRTKHLQQYVMP 613
>ref|XP_009761599.1| PREDICTED: RNA polymerase sigma factor sigB-like [Nicotiana
sylvestris]
Length = 629
Score = 726 bits (1874), Expect = 0.0
Identities = 404/619 (65%), Positives = 462/619 (74%), Gaps = 15/619 (2%)
Frame = -2
Query: 2072 RRRMSCLLPQFRCLPDTFSVNFKSQNHSAIHPSKSRDPIYFQTQCIL-------STATTT 1914
R MS LLPQF+ LPDTF + FK+ +S I SK RD I+ +TQCIL STAT+T
Sbjct: 10 RNSMSYLLPQFKSLPDTFVLCFKTNQNSTIQLSKGRDHIHLRTQCILATTSAATSTATST 69
Query: 1913 VLELEKLQLPSLEAISSSVPADRSSKP--TRITAVLELEKLKLPSLDVHSKSIAANRPWT 1740
VL++EKL+LPS+E +SSSV A+RS KP T +AVL++ +LKL S + + S+A +RPWT
Sbjct: 70 VLDIEKLKLPSIEILSSSVAAERSWKPPSTATSAVLDIPRLKLLSFEANPDSVAPDRPWT 129
Query: 1739 YIGAVGPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAMMVSNRTD 1560
Y GAVGPP ++V +
Sbjct: 130 YTGAVGPPTEANTKSALATENLVTSDEAVVAAAAAEAVALAKAALKFAKDAVLLVGHNNL 189
Query: 1559 TTSDCETTEILLEVDNTLLERNQLAHFAE----RVDSKESKVTEIGLGENHSASYLLTES 1392
SD L E T E LA +E RV + E K +E+ E+ LT+S
Sbjct: 190 KNSDDAGRGTLSEARTTPFESVPLAQPSETGRVRVGA-EFKGSEMKWSESSLFEDSLTDS 248
Query: 1391 D-VEPSHEELELLEAQLSNSIAVRSNRQTXXXXXXXXXXXXXXANVVSVKSGSTSRKKRV 1215
D +EPS EELE+L++QLSN IAV+S RQT ANVVSVKSGSTSRKKR
Sbjct: 249 DDLEPSPEELEILQSQLSNVIAVKSTRQTERKARRGRAAERAAANVVSVKSGSTSRKKRT 308
Query: 1214 -LQDIDYSDPLRYLRGTTSSSKLLTAAEEQKLSGGIQDLLKLERLQVELTERYGDQLTFS 1038
+Q++DYSDPLRYLRGTT SS+LLTA+EEQ+LS GIQDLLKLERL+ EL R G Q T +
Sbjct: 309 SVQEVDYSDPLRYLRGTTGSSRLLTASEEQELSRGIQDLLKLERLEQELAARCGGQPTIA 368
Query: 1037 QWAAAAGVDQKTLRKRLNYGILCKDKMIKSNIRLVISIAKNYQGVGMNLQDLVQEGCRGL 858
QWAAAAGV+QKTLRKRLNYGILCKDKMIKSNIRLVISIAKNYQGVGMNLQDLVQEGCRGL
Sbjct: 369 QWAAAAGVEQKTLRKRLNYGILCKDKMIKSNIRLVISIAKNYQGVGMNLQDLVQEGCRGL 428
Query: 857 VRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLFN 678
VRGAEKFDA+KGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLF
Sbjct: 429 VRGAEKFDAAKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLFT 488
Query: 677 ENGRQPNNEEVAEATGLSMKRLNAVLLTPKAPRSLDQKIGINQNLKPSEVISDPEAETAE 498
ENGR PN+EEVAEATGLSMKRL AV+LTPKAPRSLDQKIG NQ+LKPSEVI+DPEAET+E
Sbjct: 489 ENGRLPNDEEVAEATGLSMKRLTAVMLTPKAPRSLDQKIGFNQSLKPSEVIADPEAETSE 548
Query: 497 DLLIKEFMKQDLAKVLDTLNPREKQVIRWRFGLEDGRMKTLQEIGESMGVSRERIRQIES 318
++L+K+FM+QDL KVLDTLNPREKQV++WRFGL DGRMKTLQEIGE MGVSRERIRQIES
Sbjct: 549 EMLMKQFMRQDLEKVLDTLNPREKQVVKWRFGLADGRMKTLQEIGELMGVSRERIRQIES 608
Query: 317 CAFRKLKNKKRTKHLQQYV 261
CAFRKLKNKKRTK LQQY+
Sbjct: 609 CAFRKLKNKKRTKFLQQYI 627
>ref|XP_012849681.1| PREDICTED: RNA polymerase sigma factor sigB [Erythranthe guttatus]
gi|604314290|gb|EYU27177.1| hypothetical protein
MIMGU_mgv1a003367mg [Erythranthe guttata]
Length = 589
Score = 724 bits (1870), Expect = 0.0
Identities = 403/613 (65%), Positives = 462/613 (75%), Gaps = 11/613 (1%)
Frame = -2
Query: 2063 MSCLLPQFRCLPDTFSVNFKSQNHSAIHPSKSRDPIYFQTQCILST--------ATTTVL 1908
MSCLLPQF+C PDTF+VNFKSQ +H SKSR+ I F+TQC+LST ATTT+L
Sbjct: 1 MSCLLPQFKCSPDTFAVNFKSQTLFTVHSSKSRESINFRTQCVLSTTSPPPTMAATTTLL 60
Query: 1907 ELEKLQLPSLEAISSSVPADRS-SKPTRITAVLELEKLKLPSLDVHSKSIAANRPWTYIG 1731
E EKLQL LE I +S+PADRS + P T++L+L+KL S +A+N+ TY+G
Sbjct: 61 EFEKLQLSPLETIPNSLPADRSWTTPRAKTSLLDLDKLT-------SLPVASNKTLTYVG 113
Query: 1730 AVGPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAMMVSNRTDTTS 1551
+VGPP AMMVS T
Sbjct: 114 SVGPPSEINLGANLDKEALITSDEAVITAAASEALALAKAAVKVAKDAAMMVSLHRSTKP 173
Query: 1550 DCETTEILLEVDNTLLERNQLAHFAERVDSKESKVTEIGLGENHSASYLLTESD--VEPS 1377
D T+ LEVD + AERV +E+ EIG GEN ++L ESD EPS
Sbjct: 174 D---TKSFLEVDTS----------AERVVVREA---EIGSGENDD--HVLGESDDSEEPS 215
Query: 1376 HEELELLEAQLSNSIAVRSNRQTXXXXXXXXXXXXXXANVVSVKSGSTSRKKRVLQDIDY 1197
EELELL+ QLS+SIAVRS RQ ANVVSVKSGS+ +K+ +Q++DY
Sbjct: 216 AEELELLDLQLSSSIAVRSKRQIERKVRRGRAAEKAAANVVSVKSGSSKKKRSPVQEVDY 275
Query: 1196 SDPLRYLRGTTSSSKLLTAAEEQKLSGGIQDLLKLERLQVELTERYGDQLTFSQWAAAAG 1017
SDPLRYLR TTSS++LLTA+EEQ LS GIQ LLKLERLQVEL ER+G + ++SQWAAAAG
Sbjct: 276 SDPLRYLRATTSSTRLLTASEEQVLSEGIQVLLKLERLQVELIERFGGEPSYSQWAAAAG 335
Query: 1016 VDQKTLRKRLNYGILCKDKMIKSNIRLVISIAKNYQGVGMNLQDLVQEGCRGLVRGAEKF 837
VDQKTLR+++NYGILCKDKMIKSNIRLVISIAKNYQG GMNLQDLVQEGCRGLVRGAEKF
Sbjct: 336 VDQKTLREQINYGILCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKF 395
Query: 836 DASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLFNENGRQPN 657
DA+KGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQL++ENGR PN
Sbjct: 396 DATKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRVPN 455
Query: 656 NEEVAEATGLSMKRLNAVLLTPKAPRSLDQKIGINQNLKPSEVISDPEAETAEDLLIKEF 477
+EEVAEATGLSMKRL+AV+LTPK PRSLDQKIG+NQ+LKPSEVISDPEAET+E+LLIK+F
Sbjct: 456 DEEVAEATGLSMKRLSAVMLTPKPPRSLDQKIGVNQDLKPSEVISDPEAETSEELLIKQF 515
Query: 476 MKQDLAKVLDTLNPREKQVIRWRFGLEDGRMKTLQEIGESMGVSRERIRQIESCAFRKLK 297
MKQDLA VLD+LNPREKQV++WRFG+EDGRMKTLQEIGE MGVSRER+RQIESCAFRKLK
Sbjct: 516 MKQDLADVLDSLNPREKQVVKWRFGIEDGRMKTLQEIGELMGVSRERVRQIESCAFRKLK 575
Query: 296 NKKRTKHLQQYVM 258
NKKRTK LQQYVM
Sbjct: 576 NKKRTKQLQQYVM 588
>ref|XP_009599122.1| PREDICTED: RNA polymerase sigma factor sigB-like [Nicotiana
tomentosiformis]
Length = 641
Score = 721 bits (1862), Expect = 0.0
Identities = 399/617 (64%), Positives = 460/617 (74%), Gaps = 14/617 (2%)
Frame = -2
Query: 2069 RRMSCLLPQFRCLPDTFSVNFKSQNHSAIHPSKSRDPIYFQTQCIL-------STATTTV 1911
R MS LLPQF+ LPDTF + FK+ +S I SK RD I+ +TQCIL STAT+TV
Sbjct: 23 RNMSYLLPQFKSLPDTFVLCFKTNQNSTIQLSKGRDHIHLRTQCILATTSAATSTATSTV 82
Query: 1910 LELEKLQLPSLEAISSSVPADRSSKP--TRITAVLELEKLKLPSLDVHSKSIAANRPWTY 1737
L++EKL+LPS+E +SSSV A+RS KP T +AVL++ +LKL S + + S+A +RPWTY
Sbjct: 83 LDIEKLKLPSIEILSSSVAAERSWKPPSTATSAVLDIPRLKLLSFEANPDSVAPDRPWTY 142
Query: 1736 IGAVGPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAMMVSNRTDT 1557
G VGPP ++V +
Sbjct: 143 TGPVGPPTEANTKSVLATENLVTSDEAVVAAAAAEAVALAKAALKFAKDVVLLVGHNNLK 202
Query: 1556 TSDCETTEILLEVDNTLLERNQLAHFAE--RVD-SKESKVTEIGLGENHSASYLLTESD- 1389
SD L E T E LA +E RV E K +E+ E+ LT+SD
Sbjct: 203 NSDDAGRGTLSEARTTPFESVHLAQPSETGRVGVGAEFKGSEMKWSESSLLEDSLTDSDD 262
Query: 1388 VEPSHEELELLEAQLSNSIAVRSNRQTXXXXXXXXXXXXXXANVVSVKSGSTSRKKRV-L 1212
++PS EELE+L++QLSN IAV+S RQT ANVVSVKSGSTSRKKR +
Sbjct: 263 LDPSPEELEILQSQLSNVIAVKSTRQTERKARRGRAAERAAANVVSVKSGSTSRKKRTSV 322
Query: 1211 QDIDYSDPLRYLRGTTSSSKLLTAAEEQKLSGGIQDLLKLERLQVELTERYGDQLTFSQW 1032
Q++DYSDPLRYLRGTT SS+LLTA+EEQ+LS GIQD LKLERL+ EL +R G Q T +QW
Sbjct: 323 QEVDYSDPLRYLRGTTGSSRLLTASEEQELSRGIQDQLKLERLEQELADRCGGQPTIAQW 382
Query: 1031 AAAAGVDQKTLRKRLNYGILCKDKMIKSNIRLVISIAKNYQGVGMNLQDLVQEGCRGLVR 852
AAAAGV+QKTLRKRLNYGILCKDKMIKSN+RLVISIAKNYQGVGMNLQDLVQEGCRGLVR
Sbjct: 383 AAAAGVEQKTLRKRLNYGILCKDKMIKSNVRLVISIAKNYQGVGMNLQDLVQEGCRGLVR 442
Query: 851 GAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLFNEN 672
GAEKFDA+KGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLF EN
Sbjct: 443 GAEKFDAAKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLFTEN 502
Query: 671 GRQPNNEEVAEATGLSMKRLNAVLLTPKAPRSLDQKIGINQNLKPSEVISDPEAETAEDL 492
GR PN+EEVAEATGLSMKRL AV+LTPKAPRSLDQKIG NQ+LKPSEVI+DPEAET+E++
Sbjct: 503 GRLPNDEEVAEATGLSMKRLTAVMLTPKAPRSLDQKIGFNQSLKPSEVIADPEAETSEEM 562
Query: 491 LIKEFMKQDLAKVLDTLNPREKQVIRWRFGLEDGRMKTLQEIGESMGVSRERIRQIESCA 312
L+K+FM+QDL +VLDTLNPREKQV++WRFGL DGRMKTLQEIGE MGVSRERIRQIESCA
Sbjct: 563 LMKQFMRQDLERVLDTLNPREKQVVKWRFGLADGRMKTLQEIGELMGVSRERIRQIESCA 622
Query: 311 FRKLKNKKRTKHLQQYV 261
FRKLKNKKRTK LQQY+
Sbjct: 623 FRKLKNKKRTKFLQQYI 639
>emb|CDP07629.1| unnamed protein product [Coffea canephora]
Length = 615
Score = 720 bits (1858), Expect = 0.0
Identities = 398/614 (64%), Positives = 456/614 (74%), Gaps = 12/614 (1%)
Frame = -2
Query: 2063 MSCLLPQFRCLPDTFSVNFKSQNHSAIHPSKSRDPIYFQTQCILST------ATTTVLEL 1902
MSCLLPQFRCLPD F V FKS HSA SK+RDPI+ +TQCILST A +TVL++
Sbjct: 1 MSCLLPQFRCLPDAFGVAFKSHQHSAPQLSKNRDPIHVRTQCILSTTSAPTSAASTVLDI 60
Query: 1901 EKLQLPSLEAISSSVPAD--RSSKPTRITAVLELEKLKLPSLDVHSKSIAANRPWTYIGA 1728
EKL+L SLEA S+SV ++ K + AVL +EKLKL SL+ HS S+ ANRPWTY G
Sbjct: 61 EKLRLLSLEANSNSVSDGSWKAPKSPAMAAVLVMEKLKLISLEAHSDSVTANRPWTYNGP 120
Query: 1727 VGPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAMMVSNRTDTTSD 1548
V AMMV + T +
Sbjct: 121 VDSAIKPNLGATLATESLIANEEAVIAAAAAEAVALAKAALKVAKDAAMMVDHGNLTEPE 180
Query: 1547 CETTEILLEVDNTLLERNQLAHFAERVDS-KESKVTEIGLGENHSASYLLTESD-VEPSH 1374
+ + L E + L R L +RV + E + + LGENHS Y TESD +EP++
Sbjct: 181 SKAMDTLSESSDVLSNRALLGQLEKRVSTIGEINIAGVELGENHSIWYPFTESDDMEPTN 240
Query: 1373 EELELLEAQLSNSIAVRSNRQTXXXXXXXXXXXXXXANVVSVKS-GSTSRKKRV-LQDID 1200
EELELL+ QL N++AVRS RQ A+ VSVKS GSTSRKKR +Q+ID
Sbjct: 241 EELELLQEQLLNNVAVRSKRQKERKARRARAAERAAASAVSVKSSGSTSRKKRSSIQEID 300
Query: 1199 YSDPLRYLRGTTSSSKLLTAAEEQKLSGGIQDLLKLERLQVELTERYGDQLTFSQWAAAA 1020
YSDPLRYLRGT ++S+LLTA+EEQ+LS GIQDLLKLE L EL +R G + TF+QWAAAA
Sbjct: 301 YSDPLRYLRGTATTSRLLTASEEQELSEGIQDLLKLETLHEELAQRCGAEPTFAQWAAAA 360
Query: 1019 GVDQKTLRKRLNYGILCKDKMIKSNIRLVISIAKNYQGVGMNLQDLVQEGCRGLVRGAEK 840
GVDQKTLRKRLNYG L KDKMI SNIRLVISIA+NYQG GMNLQDLVQEGCRGLVRGAEK
Sbjct: 361 GVDQKTLRKRLNYGTLSKDKMIMSNIRLVISIARNYQGAGMNLQDLVQEGCRGLVRGAEK 420
Query: 839 FDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLFNENGRQP 660
FDA KGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEA+KQL++ENGR P
Sbjct: 421 FDAKKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEAKKQLYSENGRHP 480
Query: 659 NNEEVAEATGLSMKRLNAVLLTPKAPRSLDQKIGINQNLKPSEVISDPEAETAEDLLIKE 480
++EEVAEA GLSMKRL+AV+LTPKAP+SLDQKIGINQNLKPSEVI+DPEAET+EDLL+K
Sbjct: 481 DDEEVAEAAGLSMKRLSAVMLTPKAPKSLDQKIGINQNLKPSEVIADPEAETSEDLLVKR 540
Query: 479 FMKQDLAKVLDTLNPREKQVIRWRFGLEDGRMKTLQEIGESMGVSRERIRQIESCAFRKL 300
FM+QDL KVL+TLNPRE+QVIRWRFGL DGRMKTLQEIGE MGVSRERIRQIESCAFRKL
Sbjct: 541 FMRQDLEKVLNTLNPRERQVIRWRFGLGDGRMKTLQEIGELMGVSRERIRQIESCAFRKL 600
Query: 299 KNKKRTKHLQQYVM 258
KNK+RTKHLQQY++
Sbjct: 601 KNKRRTKHLQQYLL 614
>ref|XP_004229543.1| PREDICTED: RNA polymerase sigma factor sigB [Solanum lycopersicum]
Length = 613
Score = 717 bits (1852), Expect = 0.0
Identities = 400/619 (64%), Positives = 449/619 (72%), Gaps = 18/619 (2%)
Frame = -2
Query: 2063 MSCLLPQFRCLPDTFSVNFKSQNHSAIHPSKSRDPIYFQTQCILST-------ATTTVLE 1905
MS LLPQF LPD F + K+Q + I SKSRD I+ +TQCILST AT+TVL
Sbjct: 1 MSYLLPQFLSLPDAFVICAKTQQQTTIQLSKSRDSIHLRTQCILSTTSAVTSTATSTVLG 60
Query: 1904 LEKLQLPSLEAISSSVPADRS--SKPTRITAVLELEKLKLPSLDVHSKSIAANRPWTYIG 1731
+EKLQLPS+E +S+SV A+RS S T V ++KLKLPS + + S+A +RPWTY G
Sbjct: 61 IEKLQLPSIEILSNSVAAERSWKSPSAATTTVPGIQKLKLPSFEANPDSVAPDRPWTYTG 120
Query: 1730 AVGPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAMMVSNRTDTTS 1551
AVGPP M+V S
Sbjct: 121 AVGPPAEANTKPEDSLASEEAIVAAAAAEAVALAKAALKGAQDAV----MLVGYNNLKDS 176
Query: 1550 DCETTEILLEVDNTLLERNQLAHFAE--------RVDSKESKVTEIGLGENHSASYLLTE 1395
D L E E LA E ++ E K T G + L
Sbjct: 177 DNVGRGTLSEARTAPFESVHLAQPGETRGVGVCAELNGSEMKWT----GSSLFRDTLTDS 232
Query: 1394 SDVEPSHEELELLEAQLSNSIAVRSNRQTXXXXXXXXXXXXXXANVVSVKSGSTSRKKRV 1215
D+EPSHEELE+L++QLSN IAV+SNRQT ANVVSVKSGSTSRKKR
Sbjct: 233 DDLEPSHEELEILQSQLSNVIAVKSNRQTERKARRAKAVERAAANVVSVKSGSTSRKKRA 292
Query: 1214 -LQDIDYSDPLRYLRGTTSSSKLLTAAEEQKLSGGIQDLLKLERLQVELTERYGDQLTFS 1038
+QD+DYSDPLRYLRGTT SS+LLTA+EEQ+LS GIQDLLKLERLQVELTER G Q TF+
Sbjct: 293 SVQDVDYSDPLRYLRGTTCSSRLLTASEEQELSRGIQDLLKLERLQVELTERCGGQPTFT 352
Query: 1037 QWAAAAGVDQKTLRKRLNYGILCKDKMIKSNIRLVISIAKNYQGVGMNLQDLVQEGCRGL 858
QWAAAAGVDQ TLRKRLNYGILCKDKMIKSN+RLVISIAKNYQGVGMNLQDLVQEGCRGL
Sbjct: 353 QWAAAAGVDQMTLRKRLNYGILCKDKMIKSNVRLVISIAKNYQGVGMNLQDLVQEGCRGL 412
Query: 857 VRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLFN 678
VRGAEKFDA+KGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQL
Sbjct: 413 VRGAEKFDATKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLLT 472
Query: 677 ENGRQPNNEEVAEATGLSMKRLNAVLLTPKAPRSLDQKIGINQNLKPSEVISDPEAETAE 498
ENGR PN+ EVAEATGLSMKRL AV+LTPKAPRSLDQK+G N++LKPSEV++DP+AET+E
Sbjct: 473 ENGRHPNDAEVAEATGLSMKRLAAVMLTPKAPRSLDQKVGFNESLKPSEVLADPDAETSE 532
Query: 497 DLLIKEFMKQDLAKVLDTLNPREKQVIRWRFGLEDGRMKTLQEIGESMGVSRERIRQIES 318
++L K+FM+QDL KVLDTLNPREKQV+RWRFGLEDGRMKTLQEIGE MGVSRERIRQIES
Sbjct: 533 EILTKQFMRQDLEKVLDTLNPREKQVVRWRFGLEDGRMKTLQEIGELMGVSRERIRQIES 592
Query: 317 CAFRKLKNKKRTKHLQQYV 261
CAFRKLKNKKRTK LQQY+
Sbjct: 593 CAFRKLKNKKRTKFLQQYI 611
>ref|XP_006359117.1| PREDICTED: RNA polymerase sigma factor sigB-like [Solanum tuberosum]
Length = 613
Score = 711 bits (1836), Expect = 0.0
Identities = 398/619 (64%), Positives = 447/619 (72%), Gaps = 18/619 (2%)
Frame = -2
Query: 2063 MSCLLPQFRCLPDTFSVNFKSQNHSAIHPSKSRDPIYFQTQCILST-------ATTTVLE 1905
MS LLPQF LPD F + K+Q + I SKSRD I+ +TQCILST AT+TVL
Sbjct: 1 MSYLLPQFLSLPDAFVICAKTQQQTTIQLSKSRDHIHLRTQCILSTTSAVTSTATSTVLG 60
Query: 1904 LEKLQLPSLEAISSSVPADRS--SKPTRITAVLELEKLKLPSLDVHSKSIAANRPWTYIG 1731
+EKLQLPS+E +S+SV A+RS S T V +++KLKLPS + + S+A +RPWTY G
Sbjct: 61 IEKLQLPSIEILSNSVAAERSWKSPSAATTTVPDIQKLKLPSFEANPDSVAPDRPWTYTG 120
Query: 1730 AVGPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAMMVSNRTDTTS 1551
AVGPP M+V S
Sbjct: 121 AVGPPAEANTKPENSLASEEAIVAAAAAEAVALAKAALKGAQDAV----MLVGYNNLNDS 176
Query: 1550 DCETTEILLEVDNTLLERNQLAHFAE--------RVDSKESKVTEIGLGENHSASYLLTE 1395
D L E E LA E ++ E K T G + L
Sbjct: 177 DNVGRGTLSEARTAPFESVHLAQPGETRRVGVCAELNGSEMKWT----GSSLFRETLTDS 232
Query: 1394 SDVEPSHEELELLEAQLSNSIAVRSNRQTXXXXXXXXXXXXXXANVVSVKSGSTSRKKRV 1215
D+EPS EELE+L++QLSN IAV+SNRQT ANVV+VKSGSTSRKKR
Sbjct: 233 DDLEPSPEELEILQSQLSNVIAVKSNRQTERKAKRAKSVEKAAANVVTVKSGSTSRKKRA 292
Query: 1214 -LQDIDYSDPLRYLRGTTSSSKLLTAAEEQKLSGGIQDLLKLERLQVELTERYGDQLTFS 1038
+QD+DYSDPLRYLRGTT SS+LLTA+EEQ+LS GIQDLLKLERLQVELTER G Q TF+
Sbjct: 293 SVQDVDYSDPLRYLRGTTCSSRLLTASEEQELSRGIQDLLKLERLQVELTERCGGQPTFT 352
Query: 1037 QWAAAAGVDQKTLRKRLNYGILCKDKMIKSNIRLVISIAKNYQGVGMNLQDLVQEGCRGL 858
QWAAAAGVDQ TLRKRLNYGILCKDKMIKSN+RLVISIAKNYQGVGMNLQDLVQEGCRGL
Sbjct: 353 QWAAAAGVDQMTLRKRLNYGILCKDKMIKSNVRLVISIAKNYQGVGMNLQDLVQEGCRGL 412
Query: 857 VRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLFN 678
VRGAEKFDA+KGFKFSTYAHWWIKQAVRKSLSDQSR IRLPFHMVEATYRVKEARKQL
Sbjct: 413 VRGAEKFDATKGFKFSTYAHWWIKQAVRKSLSDQSRMIRLPFHMVEATYRVKEARKQLLT 472
Query: 677 ENGRQPNNEEVAEATGLSMKRLNAVLLTPKAPRSLDQKIGINQNLKPSEVISDPEAETAE 498
ENGR PN+ EVAEA GLSMKRL AV+LTPKAPRSLDQKIG N++LKPSEV++DPEAET+E
Sbjct: 473 ENGRHPNDAEVAEAAGLSMKRLAAVMLTPKAPRSLDQKIGFNESLKPSEVLADPEAETSE 532
Query: 497 DLLIKEFMKQDLAKVLDTLNPREKQVIRWRFGLEDGRMKTLQEIGESMGVSRERIRQIES 318
++L K+FM+QDL KVLDTLNPREKQV+RWRFGLEDGRMKTLQEIGE MGVSRERIRQIES
Sbjct: 533 EILTKQFMRQDLEKVLDTLNPREKQVVRWRFGLEDGRMKTLQEIGELMGVSRERIRQIES 592
Query: 317 CAFRKLKNKKRTKHLQQYV 261
CAFRKLKNKKRTK LQQY+
Sbjct: 593 CAFRKLKNKKRTKFLQQYI 611
>ref|XP_010052665.1| PREDICTED: RNA polymerase sigma factor sigB isoform X2 [Eucalyptus
grandis] gi|629111779|gb|KCW76739.1| hypothetical protein
EUGRSUZ_D01094 [Eucalyptus grandis]
Length = 588
Score = 706 bits (1822), Expect = 0.0
Identities = 387/607 (63%), Positives = 438/607 (72%), Gaps = 2/607 (0%)
Frame = -2
Query: 2072 RRRMSCLLPQFRCLPDTFSVNFKSQNHSAIHPSKSRDPIYFQTQCILSTATTTVLELEKL 1893
+R SCLLPQF+C PDTFS+ F++ H K+R+ YF+ QC+LS +
Sbjct: 11 QRMSSCLLPQFKCQPDTFSIQFRT------HAQKNRETTYFRAQCLLSATS--------- 55
Query: 1892 QLPSLEAISSSVPADRSSKPTRITAVLELEKLKLPSLDVHSKSIAANRPWTYIGAVGPPX 1713
P+ SS T + VL++EKL+LPSL+V + S +NRPWTY GAVGPP
Sbjct: 56 ------------PSTLSSAATAV--VLDMEKLRLPSLEVLTDSPTSNRPWTYTGAVGPPA 101
Query: 1712 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAMMVSNRTDTTSDCETTE 1533
A+M+ N + + D E
Sbjct: 102 EVNLGATLATETLLTSDEAVIAAAASEAVTLAKAALKSAKHAALMIRNESSSNID-NKLE 160
Query: 1532 ILLEVDNTLLERNQLAHFAERVDSKESKVTEIGLGENHSASYLLTES-DVEPSHEELELL 1356
+ +L + +L E E GL E + Y +S D+EP+HEEL+LL
Sbjct: 161 LSSRTSTSLSKHAELLELEHSNILTELMEPEGGLREGNVMQYSTDKSEDLEPTHEELQLL 220
Query: 1355 EAQLSNSIAVRSNRQTXXXXXXXXXXXXXXANVVSVKSGSTSRKKRV-LQDIDYSDPLRY 1179
+ QL SIAVRS RQT ANVVSVKSGS S+KKR LQ++DYSDPLRY
Sbjct: 221 QVQLFKSIAVRSRRQTERKEIRERAAEKAAANVVSVKSGSLSKKKRAALQEVDYSDPLRY 280
Query: 1178 LRGTTSSSKLLTAAEEQKLSGGIQDLLKLERLQVELTERYGDQLTFSQWAAAAGVDQKTL 999
LRGTTSSS+LLTA EE +LS GIQDLLKLERLQVELTER G + F+QWAAAAGVDQKTL
Sbjct: 281 LRGTTSSSRLLTATEETELSEGIQDLLKLERLQVELTERCGGEPAFAQWAAAAGVDQKTL 340
Query: 998 RKRLNYGILCKDKMIKSNIRLVISIAKNYQGVGMNLQDLVQEGCRGLVRGAEKFDASKGF 819
RKRLNYG LCKDKMIKSNIRLVISIAKNYQG GMNLQDLVQEGCRGLVRG EKFDASKGF
Sbjct: 341 RKRLNYGRLCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGCEKFDASKGF 400
Query: 818 KFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLFNENGRQPNNEEVAE 639
KFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQL++ENGRQP+NEEVAE
Sbjct: 401 KFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRQPDNEEVAE 460
Query: 638 ATGLSMKRLNAVLLTPKAPRSLDQKIGINQNLKPSEVISDPEAETAEDLLIKEFMKQDLA 459
ATGLSMKRLNAVL+TPKAPRSLDQKIGINQNLKPSEVI+DP AET+ED+L+K+FM+QDL
Sbjct: 461 ATGLSMKRLNAVLMTPKAPRSLDQKIGINQNLKPSEVIADPNAETSEDVLLKQFMRQDLE 520
Query: 458 KVLDTLNPREKQVIRWRFGLEDGRMKTLQEIGESMGVSRERIRQIESCAFRKLKNKKRTK 279
KVLDTLNPREKQV+RWRFGLEDGRMKTLQEIGE MGVSRERIRQIESCAFRKLKNKKRTK
Sbjct: 521 KVLDTLNPREKQVVRWRFGLEDGRMKTLQEIGELMGVSRERIRQIESCAFRKLKNKKRTK 580
Query: 278 HLQQYVM 258
HLQQYV+
Sbjct: 581 HLQQYVL 587
>ref|XP_006484754.1| PREDICTED: RNA polymerase sigma factor sigB-like isoform X1 [Citrus
sinensis]
Length = 605
Score = 697 bits (1800), Expect = 0.0
Identities = 384/613 (62%), Positives = 438/613 (71%), Gaps = 6/613 (0%)
Frame = -2
Query: 2078 TYRRRMSCLLPQFRCLPDTFSVNFKS----QNHSAIHPSKSRDPIYFQTQCILSTATTTV 1911
++ + MSCLLPQF+C PDTFS++F++ Q+HS+ HPSKS++PI F+T C+LST +
Sbjct: 19 SFNKNMSCLLPQFKCQPDTFSIHFRTLHNHQHHSS-HPSKSKEPICFRTHCVLSTTSP-- 75
Query: 1910 LELEKLQLPSLEAISSSVPADRSSKPTRITAVLELEKLKLPSLDVHSKSIAANRPWTYIG 1731
S T +T VL++EKL+LPSL+ HS ++AANR WTY G
Sbjct: 76 -----------------------STSTAMTTVLDVEKLRLPSLEAHSNAVAANRQWTYFG 112
Query: 1730 AVGPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAMMVSNRTDTTS 1551
AVGP M+ N ++
Sbjct: 113 AVGPSTEENLGTSLATETLTSDEAVIAAASAEAVALARAAVKVAKDAALMV--NHHNSAK 170
Query: 1550 DCETTEILLEVDNTLLERNQLAHFAERVDSKESKVTEIGLGENHSASYLLTES-DVEPSH 1374
I L D QL +S + E E +S L +S D+EP+H
Sbjct: 171 PKSKPAISLSADTNTSMWAQLTERERASIIGDSVIVEAAPEEEYSEQQPLNKSADLEPTH 230
Query: 1373 EELELLEAQLSNSIAVRSNRQTXXXXXXXXXXXXXXANVVSVKSGSTSRKKRV-LQDIDY 1197
EEL+LLE Q+S SIAVRS RQT ANV+SVKSGSTSR+KR +Q++DY
Sbjct: 231 EELKLLEEQVSQSIAVRSRRQTERKARRTRAAEKAAANVMSVKSGSTSRRKRPSVQEVDY 290
Query: 1196 SDPLRYLRGTTSSSKLLTAAEEQKLSGGIQDLLKLERLQVELTERYGDQLTFSQWAAAAG 1017
SDPLRYLR TTSSS+LLTA EE +LS GIQDLLKLE L+ L+ER G TF+QWAAAAG
Sbjct: 291 SDPLRYLRATTSSSRLLTANEEMQLSAGIQDLLKLEGLREVLSERCGGSPTFAQWAAAAG 350
Query: 1016 VDQKTLRKRLNYGILCKDKMIKSNIRLVISIAKNYQGVGMNLQDLVQEGCRGLVRGAEKF 837
VDQ+ LR+RLNYGILCKDKMI SNIRLVISIAKNYQG GMNLQDLVQEGCRGLVRGAEKF
Sbjct: 351 VDQRELRRRLNYGILCKDKMITSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKF 410
Query: 836 DASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLFNENGRQPN 657
DASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQL++ENGR PN
Sbjct: 411 DASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPN 470
Query: 656 NEEVAEATGLSMKRLNAVLLTPKAPRSLDQKIGINQNLKPSEVISDPEAETAEDLLIKEF 477
NEEVAEATGLSMKRL+AVLLTPKAPRSLDQK GINQNLKPSEVI+DPEAETAEDLLIK+F
Sbjct: 471 NEEVAEATGLSMKRLHAVLLTPKAPRSLDQKFGINQNLKPSEVIADPEAETAEDLLIKKF 530
Query: 476 MKQDLAKVLDTLNPREKQVIRWRFGLEDGRMKTLQEIGESMGVSRERIRQIESCAFRKLK 297
MK+DL KVLDTLNPRE+QV+RWRFGLEDGRMKTLQEIGE MGVSRERIRQIES AFRKLK
Sbjct: 531 MKEDLEKVLDTLNPRERQVVRWRFGLEDGRMKTLQEIGELMGVSRERIRQIESSAFRKLK 590
Query: 296 NKKRTKHLQQYVM 258
NKKRTKHL QY +
Sbjct: 591 NKKRTKHLMQYAI 603
>gb|KDO49412.1| hypothetical protein CISIN_1g007404mg [Citrus sinensis]
Length = 605
Score = 695 bits (1794), Expect = 0.0
Identities = 383/613 (62%), Positives = 438/613 (71%), Gaps = 6/613 (0%)
Frame = -2
Query: 2078 TYRRRMSCLLPQFRCLPDTFSVNFKS----QNHSAIHPSKSRDPIYFQTQCILSTATTTV 1911
++ + MSCLLPQF+C PDTFS++F++ Q+HS+ HPSKS++PI F+T C+LST +
Sbjct: 19 SFNKNMSCLLPQFKCQPDTFSIHFRTLHNHQHHSS-HPSKSKEPICFRTHCVLSTTSP-- 75
Query: 1910 LELEKLQLPSLEAISSSVPADRSSKPTRITAVLELEKLKLPSLDVHSKSIAANRPWTYIG 1731
S T +T VL++EKL+LPSL+ HS ++AANR WTY G
Sbjct: 76 -----------------------STSTAMTTVLDVEKLRLPSLEAHSNAVAANRQWTYFG 112
Query: 1730 AVGPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAMMVSNRTDTTS 1551
AVGP M+ N ++
Sbjct: 113 AVGPSTEENLGTSLATETLTSDEAVIAAASAEAVALARAAVKVAKDAALMV--NHHNSAK 170
Query: 1550 DCETTEILLEVDNTLLERNQLAHFAERVDSKESKVTEIGLGENHSASYLLTES-DVEPSH 1374
I D QL +S + E E +S L +S D+EP+H
Sbjct: 171 PKSKPAISSSADTNTSMWAQLTERERASIIGDSVIVEAAPEEEYSEQQPLNKSADLEPTH 230
Query: 1373 EELELLEAQLSNSIAVRSNRQTXXXXXXXXXXXXXXANVVSVKSGSTSRKKRV-LQDIDY 1197
EEL+LLE Q+S SIAVRS RQT ANV+SVKSGSTSR+KR +Q++DY
Sbjct: 231 EELKLLEEQVSQSIAVRSRRQTERKARRTRAAEKAAANVMSVKSGSTSRRKRPSVQEVDY 290
Query: 1196 SDPLRYLRGTTSSSKLLTAAEEQKLSGGIQDLLKLERLQVELTERYGDQLTFSQWAAAAG 1017
SDPLRYLR TTSSS+LLTA EE +LS GIQDLLKLE L+ L+ER G TF+QWAAAAG
Sbjct: 291 SDPLRYLRATTSSSRLLTANEEMQLSAGIQDLLKLEGLREVLSERCGGSPTFAQWAAAAG 350
Query: 1016 VDQKTLRKRLNYGILCKDKMIKSNIRLVISIAKNYQGVGMNLQDLVQEGCRGLVRGAEKF 837
VDQ+ LR+RLNYGILCKDKMI SNIRLVISIAKNYQG GMNLQDLVQEGCRGLVRGAEKF
Sbjct: 351 VDQRELRRRLNYGILCKDKMITSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKF 410
Query: 836 DASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLFNENGRQPN 657
DASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQL++ENGR PN
Sbjct: 411 DASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPN 470
Query: 656 NEEVAEATGLSMKRLNAVLLTPKAPRSLDQKIGINQNLKPSEVISDPEAETAEDLLIKEF 477
NEEVAEATGLSMKRL+AVLL+PKAPRSLDQKIGINQNLKPSEVI+DPEAETAEDLLIK+F
Sbjct: 471 NEEVAEATGLSMKRLHAVLLSPKAPRSLDQKIGINQNLKPSEVIADPEAETAEDLLIKKF 530
Query: 476 MKQDLAKVLDTLNPREKQVIRWRFGLEDGRMKTLQEIGESMGVSRERIRQIESCAFRKLK 297
MK+DL KVLDTLNPRE+QV+RWRFGLEDGRMKTLQEIGE MGVSRERIRQIES AFRKLK
Sbjct: 531 MKEDLEKVLDTLNPRERQVVRWRFGLEDGRMKTLQEIGELMGVSRERIRQIESSAFRKLK 590
Query: 296 NKKRTKHLQQYVM 258
NKKRTKHL QY +
Sbjct: 591 NKKRTKHLMQYAI 603
>ref|XP_006437338.1| hypothetical protein CICLE_v10030998mg [Citrus clementina]
gi|557539534|gb|ESR50578.1| hypothetical protein
CICLE_v10030998mg [Citrus clementina]
Length = 605
Score = 693 bits (1789), Expect = 0.0
Identities = 381/613 (62%), Positives = 438/613 (71%), Gaps = 6/613 (0%)
Frame = -2
Query: 2078 TYRRRMSCLLPQFRCLPDTFSVNFKS----QNHSAIHPSKSRDPIYFQTQCILSTATTTV 1911
++ + MSCLLPQF+C PDTFS++F++ Q+HS+ HPSKS++PI F+T C+LST +
Sbjct: 19 SFNKNMSCLLPQFKCQPDTFSIHFRTLHNHQHHSS-HPSKSKEPICFRTHCVLSTTSP-- 75
Query: 1910 LELEKLQLPSLEAISSSVPADRSSKPTRITAVLELEKLKLPSLDVHSKSIAANRPWTYIG 1731
S T +T VL++EKL+LPSL+ HS ++AANR WTY G
Sbjct: 76 -----------------------STSTAMTTVLDVEKLRLPSLEAHSNAVAANRQWTYFG 112
Query: 1730 AVGPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAMMVSNRTDTTS 1551
AVGP M+ N ++
Sbjct: 113 AVGPSTEENLGTSLATETLTSDEAVIAAASAEAVALARAAVKVAKDAALMV--NHHNSAK 170
Query: 1550 DCETTEILLEVDNTLLERNQLAHFAERVDSKESKVTEIGLGENHSASYLLTES-DVEPSH 1374
I L D + QL +S + E E +S L +S D+EP+H
Sbjct: 171 PKSKPAISLSADTSTSMWAQLTERERASIIGDSVIVEAAPEEEYSEQQPLNKSADLEPTH 230
Query: 1373 EELELLEAQLSNSIAVRSNRQTXXXXXXXXXXXXXXANVVSVKSGSTSRKKRV-LQDIDY 1197
EEL+LLE Q+S SIAVRS RQT ANV+SVKSGST+R+KR +Q++DY
Sbjct: 231 EELKLLEEQVSQSIAVRSRRQTERKARRTRAAEKAAANVMSVKSGSTTRRKRPSVQEVDY 290
Query: 1196 SDPLRYLRGTTSSSKLLTAAEEQKLSGGIQDLLKLERLQVELTERYGDQLTFSQWAAAAG 1017
SDPLRYLR TTSSS+LLTA EE +LS GIQDLLKLE L+ L+ER G TF+QWAAAAG
Sbjct: 291 SDPLRYLRATTSSSRLLTANEEMQLSAGIQDLLKLEGLREVLSERCGGSPTFAQWAAAAG 350
Query: 1016 VDQKTLRKRLNYGILCKDKMIKSNIRLVISIAKNYQGVGMNLQDLVQEGCRGLVRGAEKF 837
VDQ+ LR+RLNYGILCKDKMI SNIRLVISIAKNYQG GMNLQDLVQEGCRGLVRGAEKF
Sbjct: 351 VDQRELRRRLNYGILCKDKMITSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKF 410
Query: 836 DASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLFNENGRQPN 657
DASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQL++ENGR PN
Sbjct: 411 DASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPN 470
Query: 656 NEEVAEATGLSMKRLNAVLLTPKAPRSLDQKIGINQNLKPSEVISDPEAETAEDLLIKEF 477
NEEVA+ATGLSMKRL+AVLL PKAPRSLDQK GINQNLKPSEVI+DPEAETAEDLLIK+F
Sbjct: 471 NEEVAKATGLSMKRLHAVLLAPKAPRSLDQKFGINQNLKPSEVIADPEAETAEDLLIKKF 530
Query: 476 MKQDLAKVLDTLNPREKQVIRWRFGLEDGRMKTLQEIGESMGVSRERIRQIESCAFRKLK 297
MK+DL KVLDTLNPRE+QV+RWRFGLEDGRMKTLQEIGE MGVSRERIRQIES AFRKLK
Sbjct: 531 MKEDLEKVLDTLNPRERQVVRWRFGLEDGRMKTLQEIGELMGVSRERIRQIESSAFRKLK 590
Query: 296 NKKRTKHLQQYVM 258
NKKRTKHL QY +
Sbjct: 591 NKKRTKHLMQYAI 603
>ref|XP_010661180.1| PREDICTED: RNA polymerase sigma factor sigB [Vitis vinifera]
gi|296090195|emb|CBI40014.3| unnamed protein product
[Vitis vinifera]
Length = 575
Score = 692 bits (1786), Expect = 0.0
Identities = 384/606 (63%), Positives = 437/606 (72%), Gaps = 4/606 (0%)
Frame = -2
Query: 2063 MSCLLPQFRCLPDTFSVNFKSQNHSAIHP-SKSRDPIYFQTQCILSTATTTVLELEKLQL 1887
MSCLLPQF+C PDTFS H +H SK+R+ IYF+ QC LST +
Sbjct: 1 MSCLLPQFKCPPDTFST------HPKLHILSKNREAIYFRVQCALSTTS----------- 43
Query: 1886 PSLEAISSSVPADRSSKPTRITAVLELEKLKLPSLDVHSKSIAANRPWTYIGAVGPPXXX 1707
P L T TAVL++EKL+LPSL+ HS S+AA+RPWTYIG VGPP
Sbjct: 44 PPLS--------------TSTTAVLDIEKLRLPSLESHSNSVAAHRPWTYIGVVGPPTEA 89
Query: 1706 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAMMVSNRTDTTSDCETTEIL 1527
A +V S+ + L
Sbjct: 90 NFEATLARETLLTSEEAVIAAAAAEAVALAKAAVKVAKDAARLVGKNNSAKSETKPASFL 149
Query: 1526 LEVDNTLLERNQLAHFAERVDSKESKV-TEIGLGENHSASYLLTESD-VEPSHEELELLE 1353
D + R Q ER+ V E G+ + +S + +SD +EP+ EELELLE
Sbjct: 150 SGDDTSQFRRIQFTE-TERIGILGDSVGAETGMVDYNSLQDVTEDSDDLEPTLEELELLE 208
Query: 1352 AQLSNSIAVRSNRQTXXXXXXXXXXXXXXANVVSVKSGSTSRKKRV-LQDIDYSDPLRYL 1176
A+ S SI VRSNRQ A VVSV+SGSTSR+KRV LQ++DYSDPLRYL
Sbjct: 209 AEFSKSIVVRSNRQVERKARRARAAEKASAGVVSVRSGSTSRRKRVSLQEVDYSDPLRYL 268
Query: 1175 RGTTSSSKLLTAAEEQKLSGGIQDLLKLERLQVELTERYGDQLTFSQWAAAAGVDQKTLR 996
RGTTS+S+LLTA EE +LS GIQDLLKLE+LQ +L ER+G + TF+QWAAAAGVDQKTLR
Sbjct: 269 RGTTSTSRLLTATEELELSEGIQDLLKLEKLQEDLEERFGVKPTFAQWAAAAGVDQKTLR 328
Query: 995 KRLNYGILCKDKMIKSNIRLVISIAKNYQGVGMNLQDLVQEGCRGLVRGAEKFDASKGFK 816
+R NYGI CKDKMIKSNIRLVISIAKNYQG GMN+QDLVQEGCRGLVRGAEKFDASKGFK
Sbjct: 329 RRTNYGIRCKDKMIKSNIRLVISIAKNYQGAGMNIQDLVQEGCRGLVRGAEKFDASKGFK 388
Query: 815 FSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLFNENGRQPNNEEVAEA 636
FSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQL++ENGR PNNEEVAEA
Sbjct: 389 FSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPNNEEVAEA 448
Query: 635 TGLSMKRLNAVLLTPKAPRSLDQKIGINQNLKPSEVISDPEAETAEDLLIKEFMKQDLAK 456
TGLSMKRLNAVLLTPKAPRSLDQKIGINQNLKPSEVI+DP+AETAE+LLIK+FM++DL K
Sbjct: 449 TGLSMKRLNAVLLTPKAPRSLDQKIGINQNLKPSEVIADPDAETAEELLIKQFMREDLEK 508
Query: 455 VLDTLNPREKQVIRWRFGLEDGRMKTLQEIGESMGVSRERIRQIESCAFRKLKNKKRTKH 276
VL++LNPREKQVIRWR+GLEDGR KTLQEIGE MGVSRERIRQIESCAFRKLKNK+RTKH
Sbjct: 509 VLNSLNPREKQVIRWRYGLEDGRTKTLQEIGELMGVSRERIRQIESCAFRKLKNKRRTKH 568
Query: 275 LQQYVM 258
LQQY++
Sbjct: 569 LQQYLV 574
>ref|XP_010278441.1| PREDICTED: RNA polymerase sigma factor sigB-like [Nelumbo nucifera]
Length = 572
Score = 685 bits (1768), Expect = 0.0
Identities = 384/608 (63%), Positives = 438/608 (72%), Gaps = 6/608 (0%)
Frame = -2
Query: 2063 MSCLLPQFRCLPDTFSVNFKSQNHSAIHPS----KSRDPIYFQTQCILSTATTTVLELEK 1896
M+CLLPQF+C PDT S++FK+ H + + K+RD + F+TQCILST T T+
Sbjct: 1 MACLLPQFKCSPDTLSIHFKTHQHQHHYSNNSQLKARDLLCFRTQCILSTTTATMT---- 56
Query: 1895 LQLPSLEAISSSVPADRSSKPTRITAVLELEKLKLPSLDVHSKSIAANRPWTYIGAVGPP 1716
T V++ EKL++PSL+ H S+ A+RP TYIGA+ PP
Sbjct: 57 ------------------------TTVVDDEKLRMPSLEAHLISVPADRPLTYIGAIDPP 92
Query: 1715 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAMMVSNRTDTTSDCETT 1536
A+MVS + SD
Sbjct: 93 TKAKFEATLATEPLITGDEALIAAAAVEAVALAKAAVEIAKDAALMVSTNPSSKSDKWPP 152
Query: 1535 EILLEVDNTLLERNQLAHFAERVDSKESKVTEIGLGENHSASYLLTESD-VEPSHEELEL 1359
+I E+D E QL E+VD + LG + S +SD ++P+ EEL+L
Sbjct: 153 DIPSELDTYWHETAQLNEI-EQVD-----MVHHSLG---AESRPKEDSDYLDPTDEELKL 203
Query: 1358 LEAQLSNSIAVRSNRQTXXXXXXXXXXXXXXANVVSVKSGSTSRKKR-VLQDIDYSDPLR 1182
L+ QLS SIAVRS RQT ANVV+VKSGS+SRKKR LQD+DYSDPLR
Sbjct: 204 LQMQLSKSIAVRSGRQTERRARRARAAEKVAANVVAVKSGSSSRKKRSALQDVDYSDPLR 263
Query: 1181 YLRGTTSSSKLLTAAEEQKLSGGIQDLLKLERLQVELTERYGDQLTFSQWAAAAGVDQKT 1002
YLRGTTS+S+LLTA EE + S GIQDLLKLE+L EL ERYG Q TF+QWAAAAG+DQKT
Sbjct: 264 YLRGTTSTSRLLTATEELEFSEGIQDLLKLEKLYEELAERYGGQPTFAQWAAAAGIDQKT 323
Query: 1001 LRKRLNYGILCKDKMIKSNIRLVISIAKNYQGVGMNLQDLVQEGCRGLVRGAEKFDASKG 822
LRKRLNYGILCKDKMIKSNIRLVISIAKNYQG GMNLQDLVQEGCRGLVRGAEKFDASKG
Sbjct: 324 LRKRLNYGILCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKG 383
Query: 821 FKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLFNENGRQPNNEEVA 642
FKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRV+EARKQL++ENGR P+NEEVA
Sbjct: 384 FKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVREARKQLYSENGRHPDNEEVA 443
Query: 641 EATGLSMKRLNAVLLTPKAPRSLDQKIGINQNLKPSEVISDPEAETAEDLLIKEFMKQDL 462
EATGLSMKRL AVLLTPKAPRSLDQKIGINQNLKPSEVI+DP+AET E+LL+K+FMKQDL
Sbjct: 444 EATGLSMKRLTAVLLTPKAPRSLDQKIGINQNLKPSEVIADPDAETTEELLMKKFMKQDL 503
Query: 461 AKVLDTLNPREKQVIRWRFGLEDGRMKTLQEIGESMGVSRERIRQIESCAFRKLKNKKRT 282
KVLD+LNPREKQVIRWRFGLEDGRMKTLQEIGE MGVSRERIRQIESCAFRKLKNKKRT
Sbjct: 504 EKVLDSLNPREKQVIRWRFGLEDGRMKTLQEIGELMGVSRERIRQIESCAFRKLKNKKRT 563
Query: 281 KHLQQYVM 258
K+LQQY++
Sbjct: 564 KNLQQYLI 571
>ref|XP_009792606.1| PREDICTED: RNA polymerase sigma factor sigB-like [Nicotiana
sylvestris]
Length = 588
Score = 685 bits (1767), Expect = 0.0
Identities = 386/611 (63%), Positives = 437/611 (71%), Gaps = 10/611 (1%)
Frame = -2
Query: 2063 MSCLLPQFRCLPDTFSVNFKSQNHSAIHPSKSRDPIYFQTQCILSTATT---TVLELEKL 1893
MSCLLPQF+CLPDTF+++FK+ SA SK RDP TQC+LST++T TVL++EKL
Sbjct: 1 MSCLLPQFKCLPDTFALSFKTHQQSAPQRSKGRDPSQLWTQCVLSTSSTAAATVLDIEKL 60
Query: 1892 QLPSLEAISSSVPADRSSKPTRITAV---LELEKLKLPSLDVHSKSIAANRPWTYIGAVG 1722
QLPS+ DRS K + A ++++KLKL SL+ HS Y G V
Sbjct: 61 QLPSI---------DRSWKTPLVNATTTEVDVQKLKLQSLEAHSPG--------YSGGVA 103
Query: 1721 PPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAMMV--SNRTDTTSD 1548
MMV +N DT +
Sbjct: 104 LSTEANTKAALATENLLTGEEAVIAAAAAEAVALAKAALKVAKDAVMMVGHNNSDDTVAG 163
Query: 1547 CETTEILLEVDNTLLERNQLAHFAERVDSKESKVTEIGLGENHSASYLLTES-DVEPSHE 1371
+TT+ LLER Q E K +E+ E++S+ T+S D+EP+HE
Sbjct: 164 VDTTQ--------LLERFQPGETGRNSIVGELKASEMRWSESNSSGNSHTDSEDLEPTHE 215
Query: 1370 ELELLEAQLSNSIAVRSNRQTXXXXXXXXXXXXXXANVVSVKSGSTSRKKRV-LQDIDYS 1194
ELELL+ +L N IAVRS RQ ANVVSVKSGS RKKR +QD+DYS
Sbjct: 216 ELELLQTELLNGIAVRSKRQNERKARRARAVERAAANVVSVKSGSAGRKKRASVQDVDYS 275
Query: 1193 DPLRYLRGTTSSSKLLTAAEEQKLSGGIQDLLKLERLQVELTERYGDQLTFSQWAAAAGV 1014
DPLRYLRGTTS+S+LLTA+EE KLS GIQ+LLKLERLQ EL ER G Q T +QWAAAAGV
Sbjct: 276 DPLRYLRGTTSTSRLLTASEEHKLSEGIQELLKLERLQEELAERCGGQPTSAQWAAAAGV 335
Query: 1013 DQKTLRKRLNYGILCKDKMIKSNIRLVISIAKNYQGVGMNLQDLVQEGCRGLVRGAEKFD 834
D KTLRK +NYGILCKDKMIKSNIRLVISIAKNYQG GMNLQDLVQEGCRGLVRGAEKFD
Sbjct: 336 DLKTLRKHINYGILCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFD 395
Query: 833 ASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLFNENGRQPNN 654
ASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQL++ENGR P+
Sbjct: 396 ASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDE 455
Query: 653 EEVAEATGLSMKRLNAVLLTPKAPRSLDQKIGINQNLKPSEVISDPEAETAEDLLIKEFM 474
EE+AEATGLSMKRL A +LTPKAPRSLDQKIG NQNLKPSEVI+DPEAET+E+ LIK+FM
Sbjct: 456 EELAEATGLSMKRLTAAMLTPKAPRSLDQKIGFNQNLKPSEVIADPEAETSEETLIKQFM 515
Query: 473 KQDLAKVLDTLNPREKQVIRWRFGLEDGRMKTLQEIGESMGVSRERIRQIESCAFRKLKN 294
KQDL KVLDTLNPRE+QVIRWRFGLEDGRMKTLQEIGE M VSRERIRQIES AFRKLKN
Sbjct: 516 KQDLQKVLDTLNPRERQVIRWRFGLEDGRMKTLQEIGELMSVSRERIRQIESSAFRKLKN 575
Query: 293 KKRTKHLQQYV 261
KKRTK+LQQY+
Sbjct: 576 KKRTKNLQQYI 586
>gb|KHG18437.1| RNA polymerase sigma factor rpoD [Gossypium arboreum]
Length = 578
Score = 680 bits (1755), Expect = 0.0
Identities = 376/605 (62%), Positives = 437/605 (72%), Gaps = 3/605 (0%)
Frame = -2
Query: 2063 MSCLLPQFRCLPDTFSVNFKSQNHSAIHPSKSRDPIYFQTQCILSTATTTVLELEKLQLP 1884
MSCLLPQF+C PDTFS+ F++ +HS H SK ++ I F++QC+LST ++T
Sbjct: 1 MSCLLPQFKCQPDTFSIQFRA-HHS--HHSKHKESICFRSQCVLSTTSST---------- 47
Query: 1883 SLEAISSSVPADRSSKPTRITAVLELEKLKLPSLDVHSKSIAANRPWTYIGAVGPPXXXX 1704
T TAVL++EKL+LPS + HS S+ +RPWTY GA GPP
Sbjct: 48 ----------------STATTAVLDVEKLRLPSFEAHSNSVVTDRPWTYTGATGPPSEAS 91
Query: 1703 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAMMVSNRTDTTSDCETTEILL 1524
A+MV N + ++ ++
Sbjct: 92 FGATLATENLLTSDEAVIAAAAAEAVALARAAAKVAKDAAIMVKNHSSAKTEMKSPGS-- 149
Query: 1523 EVDNTLLERNQLAHFAERVDSKESKVT-EIGLGENHSASYLLTESD-VEPSHEELELLEA 1350
+TL + L AER V+ E+ + E+ ESD +EP++EEL+LLE
Sbjct: 150 SATDTLTSKWGLFTEAERAGIVGDYVSDELEMEEDDFEQNSTKESDELEPTNEELKLLEE 209
Query: 1349 QLSNSIAVRSNRQTXXXXXXXXXXXXXXANVVSVKSGSTSRKKR-VLQDIDYSDPLRYLR 1173
QLS SIAVRSNRQ NVVSVKSGST+RK+R LQDIDYSDPLRYLR
Sbjct: 210 QLSRSIAVRSNRQPERKAKRTRAAEKAATNVVSVKSGSTNRKRRGALQDIDYSDPLRYLR 269
Query: 1172 GTTSSSKLLTAAEEQKLSGGIQDLLKLERLQVELTERYGDQLTFSQWAAAAGVDQKTLRK 993
GTT++SKLLTA EE +LS GIQDLLKLE L EL ER G TF+QWAAAA VD+KTLR+
Sbjct: 270 GTTNTSKLLTANEELELSEGIQDLLKLEVLHEELAERCGRPPTFAQWAAAAEVDRKTLRE 329
Query: 992 RLNYGILCKDKMIKSNIRLVISIAKNYQGVGMNLQDLVQEGCRGLVRGAEKFDASKGFKF 813
RLNYG +CKDKMIKSNIRLVISIAKNYQG GMNLQDLVQEGCRGL+RGAEKFDASKGFKF
Sbjct: 330 RLNYGTICKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLIRGAEKFDASKGFKF 389
Query: 812 STYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLFNENGRQPNNEEVAEAT 633
STYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQL++ENGRQP+N EVAEAT
Sbjct: 390 STYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRQPDNIEVAEAT 449
Query: 632 GLSMKRLNAVLLTPKAPRSLDQKIGINQNLKPSEVISDPEAETAEDLLIKEFMKQDLAKV 453
GLSMKRL AVLL PKAPRSLDQKIGINQNLKPSEVI+DPEA++AED+L+K+FMK+DL KV
Sbjct: 450 GLSMKRLTAVLLAPKAPRSLDQKIGINQNLKPSEVIADPEADSAEDILLKQFMKKDLEKV 509
Query: 452 LDTLNPREKQVIRWRFGLEDGRMKTLQEIGESMGVSRERIRQIESCAFRKLKNKKRTKHL 273
LD+L+PRE+QVIRWRFG+EDGRMKTLQEIGESMGVSRERIRQIE CAFRKLKNK+RTKHL
Sbjct: 510 LDSLSPRERQVIRWRFGMEDGRMKTLQEIGESMGVSRERIRQIELCAFRKLKNKRRTKHL 569
Query: 272 QQYVM 258
QQY++
Sbjct: 570 QQYLL 574
>ref|XP_012434812.1| PREDICTED: RNA polymerase sigma factor sigB [Gossypium raimondii]
gi|763778947|gb|KJB46070.1| hypothetical protein
B456_007G347300 [Gossypium raimondii]
Length = 578
Score = 680 bits (1754), Expect = 0.0
Identities = 376/605 (62%), Positives = 437/605 (72%), Gaps = 3/605 (0%)
Frame = -2
Query: 2063 MSCLLPQFRCLPDTFSVNFKSQNHSAIHPSKSRDPIYFQTQCILSTATTTVLELEKLQLP 1884
MSCLLPQF+C PDTFS+ F++ +HS H SK ++ I F++QC+LST ++T +
Sbjct: 1 MSCLLPQFKCQPDTFSIQFRA-HHS--HHSKHKESICFRSQCVLSTTSSTSMAT------ 51
Query: 1883 SLEAISSSVPADRSSKPTRITAVLELEKLKLPSLDVHSKSIAANRPWTYIGAVGPPXXXX 1704
TAVL++EKL+LPS + HS S+ +RPWTY GA GPP
Sbjct: 52 --------------------TAVLDVEKLRLPSFEAHSNSVVTDRPWTYTGATGPPSEAS 91
Query: 1703 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAMMVSNRTDTTSDCETTEILL 1524
A+MV N ++ ++
Sbjct: 92 FGATLATENLLTSDEAVIAAAAAEAVALARAAAKVAKDAAIMVKNHGSAKTEMKSPGS-- 149
Query: 1523 EVDNTLLERNQLAHFAERVDSKESKVT-EIGLGENHSASYLLTESD-VEPSHEELELLEA 1350
+TL + L AER V+ E+ L E+H ESD +EP++EEL+LLE
Sbjct: 150 SATDTLTSKWGLFTEAERAGIVGDYVSDELELEEDHLEQNSTKESDELEPTNEELKLLEE 209
Query: 1349 QLSNSIAVRSNRQTXXXXXXXXXXXXXXANVVSVKSGSTSRKKR-VLQDIDYSDPLRYLR 1173
QLS SIAVRS+RQT NVVSVKSGST+RK+R LQDIDYSDPLRYLR
Sbjct: 210 QLSRSIAVRSHRQTERKAKRTRAAEKAATNVVSVKSGSTNRKRRGALQDIDYSDPLRYLR 269
Query: 1172 GTTSSSKLLTAAEEQKLSGGIQDLLKLERLQVELTERYGDQLTFSQWAAAAGVDQKTLRK 993
GTT++SKLLTA EE +LS GIQDLLKLE L EL ER G TF+QWAAAA VD+KTLR+
Sbjct: 270 GTTNTSKLLTANEELELSEGIQDLLKLEGLHEELAERCGRPPTFAQWAAAAEVDRKTLRE 329
Query: 992 RLNYGILCKDKMIKSNIRLVISIAKNYQGVGMNLQDLVQEGCRGLVRGAEKFDASKGFKF 813
RLNYG +C DKMIKSNIRLVISIAKNYQG GMNLQDLVQEGCRGL+RGAEKFDASKGFKF
Sbjct: 330 RLNYGTICMDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLIRGAEKFDASKGFKF 389
Query: 812 STYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLFNENGRQPNNEEVAEAT 633
STYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLF+ENGRQP+N EVAEAT
Sbjct: 390 STYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLFSENGRQPDNIEVAEAT 449
Query: 632 GLSMKRLNAVLLTPKAPRSLDQKIGINQNLKPSEVISDPEAETAEDLLIKEFMKQDLAKV 453
GLSMKRL AVLL PKAPRSLDQKIGINQNLKPSEVI+DPEA++AED+L+K+FMK+DL KV
Sbjct: 450 GLSMKRLTAVLLAPKAPRSLDQKIGINQNLKPSEVIADPEADSAEDILLKQFMKKDLEKV 509
Query: 452 LDTLNPREKQVIRWRFGLEDGRMKTLQEIGESMGVSRERIRQIESCAFRKLKNKKRTKHL 273
LD+L+PRE+QVIRWRFG+EDGR+KTLQEIGESMGVSRERIRQIE CAFRKLKNK+RTKHL
Sbjct: 510 LDSLSPRERQVIRWRFGMEDGRVKTLQEIGESMGVSRERIRQIELCAFRKLKNKRRTKHL 569
Query: 272 QQYVM 258
QQY++
Sbjct: 570 QQYLL 574
>ref|XP_012070322.1| PREDICTED: RNA polymerase sigma factor sigB [Jatropha curcas]
gi|802585247|ref|XP_012070323.1| PREDICTED: RNA
polymerase sigma factor sigB [Jatropha curcas]
gi|643732514|gb|KDP39610.1| hypothetical protein
JCGZ_02630 [Jatropha curcas]
Length = 577
Score = 679 bits (1752), Expect = 0.0
Identities = 375/610 (61%), Positives = 436/610 (71%), Gaps = 8/610 (1%)
Frame = -2
Query: 2063 MSCLLPQFRCLPDTFSVNFKS---QNHSAIHPSKSRDPIYFQTQCILSTATTTVLELEKL 1893
MSCLLPQF+C PDTFS++F++ QN + +KSR+P+ F+ QCILST +
Sbjct: 1 MSCLLPQFKCQPDTFSIHFRTHYLQNSNFCQSAKSREPVCFRAQCILSTTS--------- 51
Query: 1892 QLPSLEAISSSVPADRSSKPTRITAVLELEKLKLPSLDVHSKSIAANRPWTYIGAVGPPX 1713
P+ TAVL+LEKL+LPS + H S+ AN PWTY+G++GPP
Sbjct: 52 -------------------PSTSTAVLDLEKLRLPSFEAHPDSLVANSPWTYVGSIGPPK 92
Query: 1712 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAMMVSNRTDTTSDCETTE 1533
++ ++ +S+ E+
Sbjct: 93 ETFGSTLATETLITGDDAVIAAAAAEAVALARAAAKVAKDAAILV---KSFPSSEAESK- 148
Query: 1532 ILLEVDNTLLERNQLAHFAERVDSK---ESKVTEIGLGENHSASYLLTESD-VEPSHEEL 1365
LE+ + ++ F E ++ +S E G E H + ESD +EP+HEEL
Sbjct: 149 --LEIPSIADVSSRWPQFTETDRARIIGDSVTAETGSREEHPMQHPTKESDHLEPTHEEL 206
Query: 1364 ELLEAQLSNSIAVRSNRQTXXXXXXXXXXXXXXANVVSVKSGSTSRKKR-VLQDIDYSDP 1188
ELL+ QLS IAVRS RQT ANV+S KSGSTS+KKR LQ++DYSDP
Sbjct: 207 ELLQKQLSEGIAVRSRRQTERKERRTRAAEKAAANVMSWKSGSTSKKKRGPLQEVDYSDP 266
Query: 1187 LRYLRGTTSSSKLLTAAEEQKLSGGIQDLLKLERLQVELTERYGDQLTFSQWAAAAGVDQ 1008
LRYLRGTTS+SKLLTA EE +LS GIQDLLKLERL EL ER G Q TF QWAAAAGVDQ
Sbjct: 267 LRYLRGTTSTSKLLTATEELELSEGIQDLLKLERLHEELAERCGGQPTFQQWAAAAGVDQ 326
Query: 1007 KTLRKRLNYGILCKDKMIKSNIRLVISIAKNYQGVGMNLQDLVQEGCRGLVRGAEKFDAS 828
KTLR RLNYGI CKD+MIKSNIRLVISIAKNYQG GMNLQDLVQEGCRGLVRGAEKFDAS
Sbjct: 327 KTLRTRLNYGISCKDRMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDAS 386
Query: 827 KGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLFNENGRQPNNEE 648
KGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQL++ENGR P++EE
Sbjct: 387 KGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRYPDDEE 446
Query: 647 VAEATGLSMKRLNAVLLTPKAPRSLDQKIGINQNLKPSEVISDPEAETAEDLLIKEFMKQ 468
VAEATGLSMKRL+AVLLTPKAPRSLDQKIGIN +LKPSE+I+DP+AETAEDLL+K+FMKQ
Sbjct: 447 VAEATGLSMKRLSAVLLTPKAPRSLDQKIGINMDLKPSEIIADPDAETAEDLLMKQFMKQ 506
Query: 467 DLAKVLDTLNPREKQVIRWRFGLEDGRMKTLQEIGESMGVSRERIRQIESCAFRKLKNKK 288
DL KVLD+L+PRE QVIRWRFGLEDGR+KTLQEIGE MGVSRERIRQIES AFRKLK KK
Sbjct: 507 DLEKVLDSLSPRENQVIRWRFGLEDGRIKTLQEIGEIMGVSRERIRQIESSAFRKLKKKK 566
Query: 287 RTKHLQQYVM 258
RTK L+QY++
Sbjct: 567 RTKQLKQYLV 576
>ref|XP_010251515.1| PREDICTED: RNA polymerase sigma factor sigB-like isoform X1 [Nelumbo
nucifera]
Length = 584
Score = 677 bits (1746), Expect = 0.0
Identities = 374/611 (61%), Positives = 438/611 (71%), Gaps = 9/611 (1%)
Frame = -2
Query: 2063 MSCLLPQFRCLPDTFSVNFKS---QNHSAIH----PSKSRDPIYFQTQCILSTATTTVLE 1905
M+CLLPQF+C PDT S++F++ Q+H H SKSRD + FQTQC+LST TT +
Sbjct: 1 MACLLPQFKCSPDTISIHFRTHQLQHHKHHHCNNNHSKSRDLLSFQTQCVLSTTTTAMT- 59
Query: 1904 LEKLQLPSLEAISSSVPADRSSKPTRITAVLELEKLKLPSLDVHSKSIAANRPWTYIGAV 1725
T ++++EKL++PSL+ HS S+A++RP +YIGA
Sbjct: 60 ---------------------------TTLVDVEKLRMPSLESHSISVASDRPLSYIGAT 92
Query: 1724 GPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAMMVSNRTDTTSDC 1545
GPP A+MV++++ + S+
Sbjct: 93 GPPTKASFEATLAMESLITGDEALIAAAAAEAVALAKEAVEVAKDAALMVNDKSSSESEN 152
Query: 1544 ETTEILLEVDNTLLERNQLAHFAERVDSKESKVTEIGLGENHSASYLLTESD-VEPSHEE 1368
++ E LE+ QL E S E E S + +SD ++ S EE
Sbjct: 153 GPSDFSSESHIFRLEKAQLTETQEVGRIDHSVGLESRQEEEQSVQFSNKDSDGLDSSDEE 212
Query: 1367 LELLEAQLSNSIAVRSNRQTXXXXXXXXXXXXXXANVVSVKSGSTSRKKRV-LQDIDYSD 1191
+LL+ QL SIAVRS RQT NV+SVKSG +SRK+R LQDIDYSD
Sbjct: 213 FKLLQMQLLKSIAVRSGRQTERQARRARAMEKASTNVLSVKSGHSSRKRRAALQDIDYSD 272
Query: 1190 PLRYLRGTTSSSKLLTAAEEQKLSGGIQDLLKLERLQVELTERYGDQLTFSQWAAAAGVD 1011
PLRYLRGTTS+S+LLTA EE +LS GIQDLLKLE+L EL ER G Q TF+QWAAAAGVD
Sbjct: 273 PLRYLRGTTSTSRLLTATEELELSEGIQDLLKLEKLHEELAERCGGQPTFAQWAAAAGVD 332
Query: 1010 QKTLRKRLNYGILCKDKMIKSNIRLVISIAKNYQGVGMNLQDLVQEGCRGLVRGAEKFDA 831
QKTLRKRLNYGILCKDKMIKSNIRLVISIAKNYQG GMNLQDLVQEGCRGLV+GAEKFDA
Sbjct: 333 QKTLRKRLNYGILCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVKGAEKFDA 392
Query: 830 SKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLFNENGRQPNNE 651
SKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRV+EA+KQL++ENGR P+NE
Sbjct: 393 SKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVREAKKQLYSENGRHPDNE 452
Query: 650 EVAEATGLSMKRLNAVLLTPKAPRSLDQKIGINQNLKPSEVISDPEAETAEDLLIKEFMK 471
EVAEATGLSMKRL AVLLTPKAP SLDQKIG+NQ++KPSE+I+DP+AETAE+LLIK+FMK
Sbjct: 453 EVAEATGLSMKRLTAVLLTPKAPISLDQKIGMNQDMKPSEIIADPDAETAEELLIKQFMK 512
Query: 470 QDLAKVLDTLNPREKQVIRWRFGLEDGRMKTLQEIGESMGVSRERIRQIESCAFRKLKNK 291
QDL KVLD+LNPREKQVIRWRFG+EDGRMKTLQEIGE MGVSRERIRQIESCAFRKLKNK
Sbjct: 513 QDLEKVLDSLNPREKQVIRWRFGMEDGRMKTLQEIGELMGVSRERIRQIESCAFRKLKNK 572
Query: 290 KRTKHLQQYVM 258
+RTK+LQQYV+
Sbjct: 573 RRTKNLQQYVI 583
>ref|XP_009617776.1| PREDICTED: RNA polymerase sigma factor sigB-like [Nicotiana
tomentosiformis]
Length = 588
Score = 675 bits (1742), Expect = 0.0
Identities = 379/608 (62%), Positives = 435/608 (71%), Gaps = 7/608 (1%)
Frame = -2
Query: 2063 MSCLLPQFRCLPDTFSVNFKSQNHSAIHPSKSRDPIYFQTQCILSTATT---TVLELEKL 1893
MSCLLPQF+CLPDTF+++FK+ SA SK RDP +TQC+LST +T TVL++EKL
Sbjct: 1 MSCLLPQFKCLPDTFALSFKTHQQSAPQLSKGRDPYQLRTQCVLSTTSTAAATVLDIEKL 60
Query: 1892 QLPSLEAISSSVPADRSSKPTRITAVLELEKLKLPSLDVHSKSIAANRPWTYIGAVGPPX 1713
QLPS++ + A+ + T +++++LKL SL+ S Y G V
Sbjct: 61 QLPSIDRSWEAPSANAT------TTAVDVQRLKLQSLEAQSLR--------YSGGVALST 106
Query: 1712 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAMMV--SNRTDTTSDCET 1539
MMV +N + + +T
Sbjct: 107 EANTKAALATENLLTGEEAVIAASAAEAVALAKAALKVAKDAVMMVGHNNSDNNMAGVDT 166
Query: 1538 TEILLEVDNTLLERNQLAHFAERVDSKESKVTEIGLGENHSASYLLTES-DVEPSHEELE 1362
T+ LLER Q E K +E+ E++S LT+S D+EP+HEELE
Sbjct: 167 TQ--------LLERFQPGETGRHSIVGELKASEMRWSESNSFGNSLTDSEDLEPTHEELE 218
Query: 1361 LLEAQLSNSIAVRSNRQTXXXXXXXXXXXXXXANVVSVKSGSTSRKKRV-LQDIDYSDPL 1185
LL+ L N IAVRS RQ ANVVSVKSG RKKR +QD+DYSDPL
Sbjct: 219 LLQTDLLNGIAVRSKRQNERKARRDRAAERAAANVVSVKSGFAGRKKRASVQDVDYSDPL 278
Query: 1184 RYLRGTTSSSKLLTAAEEQKLSGGIQDLLKLERLQVELTERYGDQLTFSQWAAAAGVDQK 1005
RYLRGTTS+S+LLTA+EE KLS GIQ+LLKLERLQ EL ER G Q T +QWAAAAGVD K
Sbjct: 279 RYLRGTTSTSRLLTASEEHKLSEGIQELLKLERLQEELAERCGGQPTSAQWAAAAGVDLK 338
Query: 1004 TLRKRLNYGILCKDKMIKSNIRLVISIAKNYQGVGMNLQDLVQEGCRGLVRGAEKFDASK 825
TLRKR++YGILCKDKMIKSNIRLVISIAKNYQG GMNLQDLVQEGCRGLVRGAEKFDASK
Sbjct: 339 TLRKRISYGILCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASK 398
Query: 824 GFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLFNENGRQPNNEEV 645
GFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQL++ENGR P+ EE+
Sbjct: 399 GFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDEEEL 458
Query: 644 AEATGLSMKRLNAVLLTPKAPRSLDQKIGINQNLKPSEVISDPEAETAEDLLIKEFMKQD 465
AEATGLSMKRL AV+LTPKAPRSLDQKIG NQNLKPSEVI+DPEA+T+E+ LIK+FMKQD
Sbjct: 459 AEATGLSMKRLTAVMLTPKAPRSLDQKIGFNQNLKPSEVIADPEAKTSEETLIKQFMKQD 518
Query: 464 LAKVLDTLNPREKQVIRWRFGLEDGRMKTLQEIGESMGVSRERIRQIESCAFRKLKNKKR 285
L KVLDTLNPRE+QVIRWRFGLEDGRMKTLQEIGE M VSRERIRQIES AFRKLKNKKR
Sbjct: 519 LQKVLDTLNPRERQVIRWRFGLEDGRMKTLQEIGELMSVSRERIRQIESSAFRKLKNKKR 578
Query: 284 TKHLQQYV 261
TK+LQQY+
Sbjct: 579 TKNLQQYI 586
>ref|XP_010052664.1| PREDICTED: RNA polymerase sigma factor sigB isoform X1 [Eucalyptus
grandis]
Length = 601
Score = 674 bits (1740), Expect = 0.0
Identities = 371/574 (64%), Positives = 417/574 (72%), Gaps = 2/574 (0%)
Frame = -2
Query: 1973 KSRDPIYFQTQCILSTATTTVLELEKLQLPSLEAISSSVPADRSSKPTRITAVLELEKLK 1794
K+R+ YF+ QC+LS + P+ SS T + VL++EKL+
Sbjct: 51 KNRETTYFRAQCLLSATS---------------------PSTLSSAATAV--VLDMEKLR 87
Query: 1793 LPSLDVHSKSIAANRPWTYIGAVGPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1614
LPSL+V + S +NRPWTY GAVGPP
Sbjct: 88 LPSLEVLTDSPTSNRPWTYTGAVGPPAEVNLGATLATETLLTSDEAVIAAAASEAVTLAK 147
Query: 1613 XXXXXXXXXAMMVSNRTDTTSDCETTEILLEVDNTLLERNQLAHFAERVDSKESKVTEIG 1434
A+M+ N + + D E+ +L + +L E E G
Sbjct: 148 AALKSAKHAALMIRNESSSNID-NKLELSSRTSTSLSKHAELLELEHSNILTELMEPEGG 206
Query: 1433 LGENHSASYLLTES-DVEPSHEELELLEAQLSNSIAVRSNRQTXXXXXXXXXXXXXXANV 1257
L E + Y +S D+EP+HEEL+LL+ QL SIAVRS RQT ANV
Sbjct: 207 LREGNVMQYSTDKSEDLEPTHEELQLLQVQLFKSIAVRSRRQTERKEIRERAAEKAAANV 266
Query: 1256 VSVKSGSTSRKKRV-LQDIDYSDPLRYLRGTTSSSKLLTAAEEQKLSGGIQDLLKLERLQ 1080
VSVKSGS S+KKR LQ++DYSDPLRYLRGTTSSS+LLTA EE +LS GIQDLLKLERLQ
Sbjct: 267 VSVKSGSLSKKKRAALQEVDYSDPLRYLRGTTSSSRLLTATEETELSEGIQDLLKLERLQ 326
Query: 1079 VELTERYGDQLTFSQWAAAAGVDQKTLRKRLNYGILCKDKMIKSNIRLVISIAKNYQGVG 900
VELTER G + F+QWAAAAGVDQKTLRKRLNYG LCKDKMIKSNIRLVISIAKNYQG G
Sbjct: 327 VELTERCGGEPAFAQWAAAAGVDQKTLRKRLNYGRLCKDKMIKSNIRLVISIAKNYQGAG 386
Query: 899 MNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVE 720
MNLQDLVQEGCRGLVRG EKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVE
Sbjct: 387 MNLQDLVQEGCRGLVRGCEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVE 446
Query: 719 ATYRVKEARKQLFNENGRQPNNEEVAEATGLSMKRLNAVLLTPKAPRSLDQKIGINQNLK 540
ATYRVKEARKQL++ENGRQP+NEEVAEATGLSMKRLNAVL+TPKAPRSLDQKIGINQNLK
Sbjct: 447 ATYRVKEARKQLYSENGRQPDNEEVAEATGLSMKRLNAVLMTPKAPRSLDQKIGINQNLK 506
Query: 539 PSEVISDPEAETAEDLLIKEFMKQDLAKVLDTLNPREKQVIRWRFGLEDGRMKTLQEIGE 360
PSEVI+DP AET+ED+L+K+FM+QDL KVLDTLNPREKQV+RWRFGLEDGRMKTLQEIGE
Sbjct: 507 PSEVIADPNAETSEDVLLKQFMRQDLEKVLDTLNPREKQVVRWRFGLEDGRMKTLQEIGE 566
Query: 359 SMGVSRERIRQIESCAFRKLKNKKRTKHLQQYVM 258
MGVSRERIRQIESCAFRKLKNKKRTKHLQQYV+
Sbjct: 567 LMGVSRERIRQIESCAFRKLKNKKRTKHLQQYVL 600