BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Forsythia22_contig00007511
         (1761 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011075762.1| PREDICTED: RNA polymerase sigma factor sigA ...   707   0.0  
ref|XP_010266387.1| PREDICTED: RNA polymerase sigma factor sigA-...   689   0.0  
ref|XP_004235299.1| PREDICTED: RNA polymerase sigma factor sigA ...   687   0.0  
ref|XP_002524027.1| RNA polymerase sigma factor rpoD, putative [...   684   0.0  
ref|XP_009601815.1| PREDICTED: RNA polymerase sigma factor sigA-...   683   0.0  
ref|XP_009771934.1| PREDICTED: RNA polymerase sigma factor sigA ...   682   0.0  
dbj|BAA88921.1| sigma factor [Nicotiana tabacum]                      682   0.0  
ref|XP_010275189.1| PREDICTED: RNA polymerase sigma factor sigA-...   681   0.0  
ref|XP_008234513.1| PREDICTED: RNA polymerase sigma factor sigA ...   674   0.0  
ref|XP_012070278.1| PREDICTED: RNA polymerase sigma factor sigA ...   673   0.0  
ref|XP_007219023.1| hypothetical protein PRUPE_ppa004393mg [Prun...   673   0.0  
gb|KDO48032.1| hypothetical protein CISIN_1g010521mg [Citrus sin...   672   0.0  
gb|AKC88633.1| sigma factor [Melianthus villosus]                     671   0.0  
ref|XP_006437403.1| hypothetical protein CICLE_v10031289mg [Citr...   669   0.0  
ref|XP_006484698.1| PREDICTED: RNA polymerase sigma factor sigA-...   669   0.0  
emb|CDP04910.1| unnamed protein product [Coffea canephora]            664   0.0  
ref|XP_002325882.1| RNA POLYMERASE SIGMA SUBUNIT 1 family protei...   664   0.0  
ref|XP_011012457.1| PREDICTED: RNA polymerase sigma factor sigA ...   662   0.0  
ref|XP_009629626.1| PREDICTED: RNA polymerase sigma factor sigA-...   661   0.0  
ref|XP_009767654.1| PREDICTED: RNA polymerase sigma factor sigA-...   661   0.0  

>ref|XP_011075762.1| PREDICTED: RNA polymerase sigma factor sigA [Sesamum indicum]
          Length = 505

 Score =  707 bits (1825), Expect = 0.0
 Identities = 378/513 (73%), Positives = 422/513 (82%), Gaps = 8/513 (1%)
 Frame = -3

Query: 1675 LMMATTAVIGLSSGKRLL-SSNFYCSDFVEKLACNSDHVLPQHQLLPSTKNVITAKKSSN 1499
            ++MAT AVIGLS+GKRLL SS F  SD  +KLAC +D     H  + STKN ITAKKSSN
Sbjct: 1    MIMATAAVIGLSTGKRLLLSSTFSYSDLSDKLACTTD----PHYQIASTKNAITAKKSSN 56

Query: 1498 YGPTFLSNRHPQ-SIKALKEHVDTASNPCSVEQWP------QGEENSDPDYLVDAFLLLQ 1340
                F+SNR P  S++ALKEHVDTASN C++E W         +E +DP+YLVDA LLLQ
Sbjct: 57   ----FISNRRPPASVRALKEHVDTASNNCTLEPWLIHGSTLSTDETTDPEYLVDAVLLLQ 112

Query: 1339 KSMLEKQWNLSPDTAVITDMPREKAWKKVQVTGSGTSAXXXXXXXXXXXXXRKSSTTLQI 1160
            KSMLEKQWNLS +T     +P+++A  K++VT SGTSA             RK   + Q+
Sbjct: 113  KSMLEKQWNLSAETTTKAVIPKDRARNKIEVTCSGTSARRRRMDSRKKILGRKFPAS-QL 171

Query: 1159 SKGKQLRSVISPELHQNRLKGYVKGVVSEELLTHVEVVQLSKKIKAGLLLEEHKSRLKER 980
            +  +Q RS++SPEL QNRLKGYVKGVVSEELLTH +VVQLS+KIKAGLLLEE KSRLKER
Sbjct: 172  TTSRQWRSIVSPELLQNRLKGYVKGVVSEELLTHAQVVQLSEKIKAGLLLEEQKSRLKER 231

Query: 979  LGCDPSDEQLATSLRITRAELQSKFIECSLAREKLTMSNIRLVMSIAQRYDNMGAEMADX 800
            LG +PSDEQLATSLRI+R  LQSK IECSLAR+KL MSNIRLVMSIAQRYDNMGAEMAD 
Sbjct: 232  LGFEPSDEQLATSLRISRTNLQSKLIECSLARDKLAMSNIRLVMSIAQRYDNMGAEMADL 291

Query: 799  XXXXXXXXXXXIEKFDSSKGYKISTYVYWWIRQGVSRALVRNSRTLRLPTHLHERLSLIR 620
                       IEKFDSSKG+KISTYVYWWIRQGVSRALV NSRTLRLPTHLHERLSLIR
Sbjct: 292  IQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLSLIR 351

Query: 619  NAKAKLEEKGITPSVDRIAECLNMSQKKVRNATEAISKVFSLDREAFPSLNGLPGETLHS 440
            NAKA+LEEKGITPS+DRIAECLNMSQKKV+NATEAI+KVFSLDREAFPSLNGLPGETLHS
Sbjct: 352  NAKARLEEKGITPSIDRIAECLNMSQKKVKNATEAITKVFSLDREAFPSLNGLPGETLHS 411

Query: 439  YIADTRIENNPWHGVDEWALKDEVDKLLSSTLREREQEIIRLYYGLENECLTWEDISRRI 260
            YIAD  +ENNPWHGVDEWALKDEVDKL++ TLRERE+EIIRLYYGL+NECLTWEDISRRI
Sbjct: 412  YIADNHVENNPWHGVDEWALKDEVDKLINLTLREREREIIRLYYGLDNECLTWEDISRRI 471

Query: 259  GLSRERVRQVGLVALEKLKHAARKRRLDAMLLK 161
            GLSRERVRQVGLVALEKLKHAARKRRLD ML++
Sbjct: 472  GLSRERVRQVGLVALEKLKHAARKRRLDTMLVQ 504


>ref|XP_010266387.1| PREDICTED: RNA polymerase sigma factor sigA-like [Nelumbo nucifera]
          Length = 506

 Score =  689 bits (1779), Expect = 0.0
 Identities = 366/508 (72%), Positives = 411/508 (80%), Gaps = 5/508 (0%)
 Frame = -3

Query: 1669 MATTAVIGLSSGKRLLSSNFYCSDFVEKLACNSDHVLPQHQLLPSTKNVITAKKSSNYGP 1490
            MAT AVIGLS+GKRLL+S FY SD  ++L    DH L Q+Q   S KNVI A+KSSN+G 
Sbjct: 1    MATAAVIGLSAGKRLLNSTFYYSDVTDRLLSVYDHGLAQYQAT-SAKNVIIARKSSNFGD 59

Query: 1489 TFLSNRHPQSIKALKEHVDTASNPCSVEQWPQG-----EENSDPDYLVDAFLLLQKSMLE 1325
            +F SN+H QSI+ALKEHV+T S P + + W Q      EEN+D DY VDA LLLQK +LE
Sbjct: 60   SFPSNQHIQSIRALKEHVNTLSTPSTADVWLQSSGLLEEENTDLDYSVDALLLLQKFLLE 119

Query: 1324 KQWNLSPDTAVITDMPREKAWKKVQVTGSGTSAXXXXXXXXXXXXXRKSSTTLQISKGKQ 1145
            KQWNLS +  +    P E+  KK+QVT SG SA              K S  +Q +K KQ
Sbjct: 120  KQWNLSFEQTITDGAPGEETHKKIQVTRSGVSARQRRTSTRRTCLSPKHSI-MQPTKRKQ 178

Query: 1144 LRSVISPELHQNRLKGYVKGVVSEELLTHVEVVQLSKKIKAGLLLEEHKSRLKERLGCDP 965
            L S++SPEL ++   GYVKGV+SEELLTH EVVQLSKKIKAGL LEEHK RLKERLGCDP
Sbjct: 179  LGSMVSPELLKSHY-GYVKGVISEELLTHAEVVQLSKKIKAGLSLEEHKLRLKERLGCDP 237

Query: 964  SDEQLATSLRITRAELQSKFIECSLAREKLTMSNIRLVMSIAQRYDNMGAEMADXXXXXX 785
            SDEQLA+SLRI+RAELQSK IECSLAREKLTMSN+RLVMSIAQ+YDNMGAEMAD      
Sbjct: 238  SDEQLASSLRISRAELQSKVIECSLAREKLTMSNVRLVMSIAQKYDNMGAEMADLVQGGL 297

Query: 784  XXXXXXIEKFDSSKGYKISTYVYWWIRQGVSRALVRNSRTLRLPTHLHERLSLIRNAKAK 605
                  IEKFDSSKG+KISTYVYWWIRQGVSRALV NSRTLRLPTHLHERL LIRNAK +
Sbjct: 298  IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLCLIRNAKIR 357

Query: 604  LEEKGITPSVDRIAECLNMSQKKVRNATEAISKVFSLDREAFPSLNGLPGETLHSYIADT 425
            L EKGITPS+DRIAECLNMS+KKVRNATEA++KVFSLDREAFPSLNGLP ETLHSYIAD 
Sbjct: 358  LAEKGITPSIDRIAECLNMSEKKVRNATEAVNKVFSLDREAFPSLNGLPRETLHSYIADN 417

Query: 424  RIENNPWHGVDEWALKDEVDKLLSSTLREREQEIIRLYYGLENECLTWEDISRRIGLSRE 245
            R+ENNPWHGVDEW+LKDEV+ LLS+TL ERE++IIRLYYGL+ ECLTWEDISRRIGLSRE
Sbjct: 418  RLENNPWHGVDEWSLKDEVNNLLSTTLEERERDIIRLYYGLDKECLTWEDISRRIGLSRE 477

Query: 244  RVRQVGLVALEKLKHAARKRRLDAMLLK 161
            RVRQVGLVALEKLKHAARK+RLD ML+K
Sbjct: 478  RVRQVGLVALEKLKHAARKKRLDTMLVK 505


>ref|XP_004235299.1| PREDICTED: RNA polymerase sigma factor sigA [Solanum lycopersicum]
          Length = 509

 Score =  687 bits (1774), Expect = 0.0
 Identities = 361/510 (70%), Positives = 410/510 (80%), Gaps = 6/510 (1%)
 Frame = -3

Query: 1672 MMATTAVIGLSSGKRLLSSNFYCSDFVEKLACNSDHVLPQHQLLPSTKNVITAKKSSNYG 1493
            MMATTAVIGLS+GKRLLSS+FY SD  EKL+C+SDH LP HQ+ P+ KNVI+AKKSS+Y 
Sbjct: 1    MMATTAVIGLSAGKRLLSSSFYYSDLNEKLSCSSDHSLPCHQV-PTVKNVISAKKSSDYS 59

Query: 1492 PTFLSNRHPQSIKALKEHVDTASNPCSVEQW------PQGEENSDPDYLVDAFLLLQKSM 1331
            P+ +S+R  QS+KALKEHVD AS+P  V+ W       Q E + + D  V+  LLLQKSM
Sbjct: 60   PSCVSSRKLQSVKALKEHVDIASDPSDVQSWFERFEQLQNESDDEEDDSVEVLLLLQKSM 119

Query: 1330 LEKQWNLSPDTAVITDMPREKAWKKVQVTGSGTSAXXXXXXXXXXXXXRKSSTTLQISKG 1151
            LEKQWNLS +  +     R+K  KK+ +  SGTSA             +KSS T  IS  
Sbjct: 120  LEKQWNLSAEETLTASTQRKKNCKKMHIACSGTSARRRRMDSRQRVLAQKSSAT-PISAT 178

Query: 1150 KQLRSVISPELHQNRLKGYVKGVVSEELLTHVEVVQLSKKIKAGLLLEEHKSRLKERLGC 971
            K LRS++ P+L QNRLKGYVKG+VSEELLTH EV+QLSKKIK GL +EE KSRLKERLGC
Sbjct: 179  KPLRSILGPDLLQNRLKGYVKGIVSEELLTHTEVLQLSKKIKVGLHVEEQKSRLKERLGC 238

Query: 970  DPSDEQLATSLRITRAELQSKFIECSLAREKLTMSNIRLVMSIAQRYDNMGAEMADXXXX 791
            +PSD+QLA SL+++R +LQS  IECSLARE+L+MSN+RLVMSIAQRYDNMGAEMAD    
Sbjct: 239  EPSDDQLAVSLKMSRTDLQSTLIECSLARERLSMSNVRLVMSIAQRYDNMGAEMADLVQG 298

Query: 790  XXXXXXXXIEKFDSSKGYKISTYVYWWIRQGVSRALVRNSRTLRLPTHLHERLSLIRNAK 611
                    IEKFD SKGYKISTYVYWWIRQGVSR LV NSRTLRLPTHLHERL LIRNAK
Sbjct: 299  GLIGLLRGIEKFDPSKGYKISTYVYWWIRQGVSRTLVENSRTLRLPTHLHERLGLIRNAK 358

Query: 610  AKLEEKGITPSVDRIAECLNMSQKKVRNATEAISKVFSLDREAFPSLNGLPGETLHSYIA 431
             +LEEKGI PSV+ IA  LNMSQKKVRNATEA SKV+SLDRE FPSLNGLPG TLHSYIA
Sbjct: 359  MRLEEKGINPSVNNIAASLNMSQKKVRNATEASSKVYSLDREVFPSLNGLPGTTLHSYIA 418

Query: 430  DTRIENNPWHGVDEWALKDEVDKLLSSTLREREQEIIRLYYGLENECLTWEDISRRIGLS 251
            D  +ENNPWHGVD WALKDEV+ L+SSTLRERE+EIIRLYYGL++ECLTWEDIS+RIGLS
Sbjct: 419  DNHLENNPWHGVDVWALKDEVNNLISSTLREREREIIRLYYGLDSECLTWEDISKRIGLS 478

Query: 250  RERVRQVGLVALEKLKHAARKRRLDAMLLK 161
            RERVRQVGLVALEKLKHAARKRRLDAML+K
Sbjct: 479  RERVRQVGLVALEKLKHAARKRRLDAMLIK 508


>ref|XP_002524027.1| RNA polymerase sigma factor rpoD, putative [Ricinus communis]
            gi|223536754|gb|EEF38395.1| RNA polymerase sigma factor
            rpoD, putative [Ricinus communis]
          Length = 508

 Score =  684 bits (1765), Expect = 0.0
 Identities = 366/509 (71%), Positives = 414/509 (81%), Gaps = 6/509 (1%)
 Frame = -3

Query: 1669 MATTAVIGLSSGKRLLSSNFYCSDFVEKLACNSDHVLPQHQLLPSTKNVITAKKSSNYGP 1490
            MAT AVIGLS+GKRLLSS FY SD  EKL+  ++H L  +Q+  STK +I AKKSSNYGP
Sbjct: 1    MATAAVIGLSAGKRLLSSTFYYSDLTEKLSSANEHGLTHYQIT-STKTLIVAKKSSNYGP 59

Query: 1489 TF-LSNRHPQSIKALKEHVDTASNPCSVEQW-----PQGEENSDPDYLVDAFLLLQKSML 1328
            +F  SNR+ QSIKALKEHVDTAS P +            EE+SD DY V+A LLLQKSML
Sbjct: 60   SFPSSNRNTQSIKALKEHVDTASAPSTAATQFKTFNDMEEESSDLDYSVEALLLLQKSML 119

Query: 1327 EKQWNLSPDTAVITDMPREKAWKKVQVTGSGTSAXXXXXXXXXXXXXRKSSTTLQISKGK 1148
            EKQWNLS +    +D P  K+ KK+ VT SG SA              +S  T+Q +  K
Sbjct: 120  EKQWNLSFERTDSSDSPSRKSQKKIPVTCSGVSARQRRINIRRKNLS-QSKFTVQANVFK 178

Query: 1147 QLRSVISPELHQNRLKGYVKGVVSEELLTHVEVVQLSKKIKAGLLLEEHKSRLKERLGCD 968
            QL+S +SPEL QNRLKGYVKGVVSEELL+H EVV+LS+ IKAGL LE+HKSRLKERLGCD
Sbjct: 179  QLKSAVSPELLQNRLKGYVKGVVSEELLSHAEVVRLSRIIKAGLSLEDHKSRLKERLGCD 238

Query: 967  PSDEQLATSLRITRAELQSKFIECSLAREKLTMSNIRLVMSIAQRYDNMGAEMADXXXXX 788
            PSDEQ+ATSL+I+RAELQSK I CSLAREKL MSN+RLVMSIAQRYDNMGAEMAD     
Sbjct: 239  PSDEQVATSLKISRAELQSKSIACSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGG 298

Query: 787  XXXXXXXIEKFDSSKGYKISTYVYWWIRQGVSRALVRNSRTLRLPTHLHERLSLIRNAKA 608
                   IEKFDSSKG++ISTYVYWWIRQGVSRALV NSRTLRLP HLHERL LIRNAK 
Sbjct: 299  LIGLLRGIEKFDSSKGFRISTYVYWWIRQGVSRALVENSRTLRLPNHLHERLGLIRNAKI 358

Query: 607  KLEEKGITPSVDRIAECLNMSQKKVRNATEAISKVFSLDREAFPSLNGLPGETLHSYIAD 428
            +LEEKG+TPS+DRIAE LN+SQKKVRNATEA+SKVFSLDREAFPSLNGLPGET HSYIAD
Sbjct: 359  RLEEKGVTPSIDRIAESLNISQKKVRNATEAVSKVFSLDREAFPSLNGLPGETHHSYIAD 418

Query: 427  TRIENNPWHGVDEWALKDEVDKLLSSTLREREQEIIRLYYGLENECLTWEDISRRIGLSR 248
              +ENNPWHGVD+WALKDEV+KL++ TL+EREQEIIRLYYGL+NE LTWEDIS+RIGLSR
Sbjct: 419  NCLENNPWHGVDDWALKDEVNKLINLTLQEREQEIIRLYYGLDNESLTWEDISKRIGLSR 478

Query: 247  ERVRQVGLVALEKLKHAARKRRLDAMLLK 161
            ERVRQVGLVALEKLKHAARK++L+AML+K
Sbjct: 479  ERVRQVGLVALEKLKHAARKKKLEAMLVK 507


>ref|XP_009601815.1| PREDICTED: RNA polymerase sigma factor sigA-like [Nicotiana
            tomentosiformis]
          Length = 508

 Score =  683 bits (1762), Expect = 0.0
 Identities = 364/509 (71%), Positives = 405/509 (79%), Gaps = 5/509 (0%)
 Frame = -3

Query: 1672 MMATTAVIGLSSGKRLLSSNFYCSDFVEKLACNSDHVLPQHQLLPSTKNVITAKKSSNYG 1493
            MMAT AVIGLS+GKRLLSS+FY SD  EKL C S H LP HQ+ PS KNVITAKKSS+Y 
Sbjct: 1    MMATAAVIGLSAGKRLLSSSFYYSDLNEKLNCTSGHSLPCHQV-PSVKNVITAKKSSDYS 59

Query: 1492 PTFLSNRHPQSIKALKEHVDTASNPCSVEQWPQ-----GEENSDPDYLVDAFLLLQKSML 1328
            P+ +S+R PQS KALKEHVD   +P  V  W +       E+ D D  V+  LLLQKSML
Sbjct: 60   PSCVSSRKPQSAKALKEHVDITDDPSDVPSWFEMYEQLQNESDDEDDSVEVLLLLQKSML 119

Query: 1327 EKQWNLSPDTAVITDMPREKAWKKVQVTGSGTSAXXXXXXXXXXXXXRKSSTTLQISKGK 1148
            EKQWNLS +  +I     EK  KK  +T SGTSA             R SS T  I+  K
Sbjct: 120  EKQWNLSLEQTLIASPQHEKKSKKTHITCSGTSARRRRMDSRQRVLDRNSSATPTIA-AK 178

Query: 1147 QLRSVISPELHQNRLKGYVKGVVSEELLTHVEVVQLSKKIKAGLLLEEHKSRLKERLGCD 968
             LRS+I PEL QNRLKGYVKGVVSEELLTH EV+QLSKKI+ GL LEE KSRLKERLGC+
Sbjct: 179  PLRSIIGPELLQNRLKGYVKGVVSEELLTHAEVLQLSKKIQVGLYLEEQKSRLKERLGCE 238

Query: 967  PSDEQLATSLRITRAELQSKFIECSLAREKLTMSNIRLVMSIAQRYDNMGAEMADXXXXX 788
            PSD+QLA SL+++R +LQS  IECSLARE+L MSN+RLVMSIAQRYDN+GAEMAD     
Sbjct: 239  PSDDQLAVSLKMSRTDLQSTLIECSLARERLAMSNVRLVMSIAQRYDNVGAEMADLVQGG 298

Query: 787  XXXXXXXIEKFDSSKGYKISTYVYWWIRQGVSRALVRNSRTLRLPTHLHERLSLIRNAKA 608
                   IEKFD SKGYKISTYVYWWIRQGVSRALV NSRTLRLPT+LHERLSLIRNAK 
Sbjct: 299  LIGLLRGIEKFDPSKGYKISTYVYWWIRQGVSRALVENSRTLRLPTYLHERLSLIRNAKT 358

Query: 607  KLEEKGITPSVDRIAECLNMSQKKVRNATEAISKVFSLDREAFPSLNGLPGETLHSYIAD 428
            +LEEKGI PSV+ IA  LNMSQKKVRNATEA SK++SLDREAFPSLNGLPGETLHSYIAD
Sbjct: 359  RLEEKGIIPSVNDIAASLNMSQKKVRNATEASSKMYSLDREAFPSLNGLPGETLHSYIAD 418

Query: 427  TRIENNPWHGVDEWALKDEVDKLLSSTLREREQEIIRLYYGLENECLTWEDISRRIGLSR 248
              +ENNPWHGVD WALKDEV+ L+SSTLR+RE+EIIRLYYGL+NECLTWEDIS+RIGLSR
Sbjct: 419  NHLENNPWHGVDIWALKDEVNNLISSTLRDREREIIRLYYGLDNECLTWEDISKRIGLSR 478

Query: 247  ERVRQVGLVALEKLKHAARKRRLDAMLLK 161
            ERVRQVGLVALEKLKHAARKR+LDAML+K
Sbjct: 479  ERVRQVGLVALEKLKHAARKRQLDAMLIK 507


>ref|XP_009771934.1| PREDICTED: RNA polymerase sigma factor sigA [Nicotiana sylvestris]
          Length = 508

 Score =  682 bits (1761), Expect = 0.0
 Identities = 362/509 (71%), Positives = 406/509 (79%), Gaps = 5/509 (0%)
 Frame = -3

Query: 1672 MMATTAVIGLSSGKRLLSSNFYCSDFVEKLACNSDHVLPQHQLLPSTKNVITAKKSSNYG 1493
            MM+T AVIGLS+GKRLLSS+FY SD  EKL C SDH LP H + PS KNVITAKKSS+Y 
Sbjct: 1    MMSTAAVIGLSAGKRLLSSSFYYSDLNEKLTCTSDHSLPCHHV-PSIKNVITAKKSSDYS 59

Query: 1492 PTFLSNRHPQSIKALKEHVDTASNPCSVEQWPQ-----GEENSDPDYLVDAFLLLQKSML 1328
            P+ +S+R  QS K+LKEHVD  ++P  V  W +       E+ D D  V+  LLLQKSML
Sbjct: 60   PSCVSSRKSQSTKSLKEHVDITADPSDVPSWFEMYEQLQNESDDEDESVEVLLLLQKSML 119

Query: 1327 EKQWNLSPDTAVITDMPREKAWKKVQVTGSGTSAXXXXXXXXXXXXXRKSSTTLQISKGK 1148
            EKQWNLS +  +      EK  KK+ +T SGTSA             R SS T   S  K
Sbjct: 120  EKQWNLSLEQTLTASPQHEKKSKKMHITCSGTSARRRRMDSRQRVLDRHSSAT-PTSAAK 178

Query: 1147 QLRSVISPELHQNRLKGYVKGVVSEELLTHVEVVQLSKKIKAGLLLEEHKSRLKERLGCD 968
             LRS+I PEL QNRLKGYVKGVVSEELLTH EV+QLSKKI+ GL LEE KSRLKERLGC+
Sbjct: 179  PLRSIIGPELLQNRLKGYVKGVVSEELLTHAEVLQLSKKIQVGLYLEEQKSRLKERLGCE 238

Query: 967  PSDEQLATSLRITRAELQSKFIECSLAREKLTMSNIRLVMSIAQRYDNMGAEMADXXXXX 788
            PSD+QLA SL+++R +LQS  IECSLARE+L MSN+RLVMSIAQRYDN+GAEMAD     
Sbjct: 239  PSDDQLAVSLKMSRTDLQSTLIECSLARERLAMSNVRLVMSIAQRYDNVGAEMADLVQGG 298

Query: 787  XXXXXXXIEKFDSSKGYKISTYVYWWIRQGVSRALVRNSRTLRLPTHLHERLSLIRNAKA 608
                   IEKFD SKGYKISTYVYWWIRQGVSRALV NSRTLRLPT+LHERLSLIRNAKA
Sbjct: 299  LIGLLRGIEKFDPSKGYKISTYVYWWIRQGVSRALVENSRTLRLPTYLHERLSLIRNAKA 358

Query: 607  KLEEKGITPSVDRIAECLNMSQKKVRNATEAISKVFSLDREAFPSLNGLPGETLHSYIAD 428
            +LEEKGITPSV+ IA  LNMSQKKVRNATEA SK++SLDREAFPSLNGLPGETLHSYIAD
Sbjct: 359  RLEEKGITPSVNNIAASLNMSQKKVRNATEASSKMYSLDREAFPSLNGLPGETLHSYIAD 418

Query: 427  TRIENNPWHGVDEWALKDEVDKLLSSTLREREQEIIRLYYGLENECLTWEDISRRIGLSR 248
              +ENNPWHGVD WALKDEV+ L+SSTLR+RE+EIIRLYYGL+NECLTWEDIS+RIGLSR
Sbjct: 419  NHLENNPWHGVDVWALKDEVNNLISSTLRDREREIIRLYYGLDNECLTWEDISKRIGLSR 478

Query: 247  ERVRQVGLVALEKLKHAARKRRLDAMLLK 161
            ERVRQVGLVALEKLKHAARKR+LDAML+K
Sbjct: 479  ERVRQVGLVALEKLKHAARKRQLDAMLIK 507


>dbj|BAA88921.1| sigma factor [Nicotiana tabacum]
          Length = 508

 Score =  682 bits (1761), Expect = 0.0
 Identities = 362/509 (71%), Positives = 406/509 (79%), Gaps = 5/509 (0%)
 Frame = -3

Query: 1672 MMATTAVIGLSSGKRLLSSNFYCSDFVEKLACNSDHVLPQHQLLPSTKNVITAKKSSNYG 1493
            MM+T AVIGLS+GKRLLSS+FY SD  EKL C SDH LP H + PS KNVITAKKSS+Y 
Sbjct: 1    MMSTAAVIGLSAGKRLLSSSFYYSDLNEKLTCTSDHSLPCHHV-PSIKNVITAKKSSDYS 59

Query: 1492 PTFLSNRHPQSIKALKEHVDTASNPCSVEQWPQ-----GEENSDPDYLVDAFLLLQKSML 1328
            P+ +S+R  QS K+LKEHVD  ++P  V  W +       E+ D D  V+  LLLQKSML
Sbjct: 60   PSCVSSRKSQSAKSLKEHVDITADPSDVPSWFEMYEQLQNESDDEDESVEVLLLLQKSML 119

Query: 1327 EKQWNLSPDTAVITDMPREKAWKKVQVTGSGTSAXXXXXXXXXXXXXRKSSTTLQISKGK 1148
            EKQWNLS +  +      EK  KK+ +T SGTSA             R SS T   S  K
Sbjct: 120  EKQWNLSLEQTLTASPQHEKKSKKMHITCSGTSARRRRMDSRQRVLDRHSSAT-PTSAAK 178

Query: 1147 QLRSVISPELHQNRLKGYVKGVVSEELLTHVEVVQLSKKIKAGLLLEEHKSRLKERLGCD 968
             LRS+I PEL QNRLKGYVKGVVSEELLTH EV+QLSKKI+ GL LEE KSRLKERLGC+
Sbjct: 179  PLRSIIGPELLQNRLKGYVKGVVSEELLTHAEVLQLSKKIQVGLYLEEQKSRLKERLGCE 238

Query: 967  PSDEQLATSLRITRAELQSKFIECSLAREKLTMSNIRLVMSIAQRYDNMGAEMADXXXXX 788
            PSD+QLA SL+++R +LQS  IECSLARE+L MSN+RLVMSIAQRYDN+GAEMAD     
Sbjct: 239  PSDDQLAVSLKMSRTDLQSTLIECSLARERLAMSNVRLVMSIAQRYDNVGAEMADLVQGG 298

Query: 787  XXXXXXXIEKFDSSKGYKISTYVYWWIRQGVSRALVRNSRTLRLPTHLHERLSLIRNAKA 608
                   IEKFD SKGYKISTYVYWWIRQGVSRALV NSRTLRLPT+LHERLSLIRNAKA
Sbjct: 299  LIGLLRGIEKFDPSKGYKISTYVYWWIRQGVSRALVENSRTLRLPTYLHERLSLIRNAKA 358

Query: 607  KLEEKGITPSVDRIAECLNMSQKKVRNATEAISKVFSLDREAFPSLNGLPGETLHSYIAD 428
            +LEEKGITPSV+ IA  LNMSQKKVRNATEA SK++SLDREAFPSLNGLPGETLHSYIAD
Sbjct: 359  RLEEKGITPSVNNIAASLNMSQKKVRNATEASSKMYSLDREAFPSLNGLPGETLHSYIAD 418

Query: 427  TRIENNPWHGVDEWALKDEVDKLLSSTLREREQEIIRLYYGLENECLTWEDISRRIGLSR 248
              +ENNPWHGVD WALKDEV+ L+SSTLR+RE+EIIRLYYGL+NECLTWEDIS+RIGLSR
Sbjct: 419  NHLENNPWHGVDVWALKDEVNNLISSTLRDREREIIRLYYGLDNECLTWEDISKRIGLSR 478

Query: 247  ERVRQVGLVALEKLKHAARKRRLDAMLLK 161
            ERVRQVGLVALEKLKHAARKR+LDAML+K
Sbjct: 479  ERVRQVGLVALEKLKHAARKRQLDAMLIK 507


>ref|XP_010275189.1| PREDICTED: RNA polymerase sigma factor sigA-like [Nelumbo nucifera]
            gi|720061510|ref|XP_010275190.1| PREDICTED: RNA
            polymerase sigma factor sigA-like [Nelumbo nucifera]
            gi|720061513|ref|XP_010275191.1| PREDICTED: RNA
            polymerase sigma factor sigA-like [Nelumbo nucifera]
          Length = 516

 Score =  681 bits (1758), Expect = 0.0
 Identities = 362/511 (70%), Positives = 412/511 (80%), Gaps = 5/511 (0%)
 Frame = -3

Query: 1678 SLMMATTAVIGLSSGKRLLSSNFYCSDFVEKLACNSDHVLPQHQLLPSTKNVITAKKSSN 1499
            S  MAT AVIGL++GKRLLSS FY SD  ++LA   DH L Q+Q  PS K+V+ AKKSSN
Sbjct: 8    SSSMATAAVIGLNAGKRLLSSTFYYSDVTDRLASVYDHGLAQYQTAPS-KSVVIAKKSSN 66

Query: 1498 YGPTFLSNRHPQSIKALKEHVDTASNPCSVEQWPQG-----EENSDPDYLVDAFLLLQKS 1334
            +   F SNRH QSIKALKEH++T S     + W Q      E NSD DY ++A LLLQKS
Sbjct: 67   FDHDFASNRHNQSIKALKEHLNTFSTSTE-DMWLQTSDHLEEGNSDLDYSLEALLLLQKS 125

Query: 1333 MLEKQWNLSPDTAVITDMPREKAWKKVQVTGSGTSAXXXXXXXXXXXXXRKSSTTLQISK 1154
            +LEKQWNLS + ++    P+E+  KK+QVT SG SA               SS  +Q ++
Sbjct: 126  LLEKQWNLSFEKSMRKGAPKEETRKKIQVTRSGVSARQRRTNTRKKYLNTDSSM-MQTTR 184

Query: 1153 GKQLRSVISPELHQNRLKGYVKGVVSEELLTHVEVVQLSKKIKAGLLLEEHKSRLKERLG 974
             + L S++S EL Q+RLKGYVKGV+SEELLTH EVVQLSKKIK G+ LEEHK RLKERLG
Sbjct: 185  RRHLGSMVSEELLQSRLKGYVKGVISEELLTHSEVVQLSKKIKVGISLEEHKMRLKERLG 244

Query: 973  CDPSDEQLATSLRITRAELQSKFIECSLAREKLTMSNIRLVMSIAQRYDNMGAEMADXXX 794
            C+PSDEQLATSLRI+RAELQ K IECSLAREK+ MSN+RLVMSIA +YDNMGAEMAD   
Sbjct: 245  CEPSDEQLATSLRISRAELQMKMIECSLAREKIAMSNVRLVMSIAHKYDNMGAEMADLVQ 304

Query: 793  XXXXXXXXXIEKFDSSKGYKISTYVYWWIRQGVSRALVRNSRTLRLPTHLHERLSLIRNA 614
                     IEKFDSSKG KISTYVYWWIRQGVSRALV NSRTLRLP+H+HERLSLIRNA
Sbjct: 305  GGLIGLLRGIEKFDSSKGCKISTYVYWWIRQGVSRALVENSRTLRLPSHMHERLSLIRNA 364

Query: 613  KAKLEEKGITPSVDRIAECLNMSQKKVRNATEAISKVFSLDREAFPSLNGLPGETLHSYI 434
            K +LEEKGITPS+DRIAECLN+SQKKVRNATEA++KV SLDREAFPSLNGLPGETLHSYI
Sbjct: 365  KIRLEEKGITPSIDRIAECLNISQKKVRNATEAVNKVISLDREAFPSLNGLPGETLHSYI 424

Query: 433  ADTRIENNPWHGVDEWALKDEVDKLLSSTLREREQEIIRLYYGLENECLTWEDISRRIGL 254
            AD RIENNPWHGVDEW+LKDEV+ LL++TLRERE++IIRLYYGL+ ECLTWEDISRRIGL
Sbjct: 425  ADNRIENNPWHGVDEWSLKDEVNNLLNTTLRERERDIIRLYYGLDEECLTWEDISRRIGL 484

Query: 253  SRERVRQVGLVALEKLKHAARKRRLDAMLLK 161
            SRERVRQVGLVALEKLKHAARK+RLDAML+K
Sbjct: 485  SRERVRQVGLVALEKLKHAARKKRLDAMLVK 515


>ref|XP_008234513.1| PREDICTED: RNA polymerase sigma factor sigA [Prunus mume]
          Length = 512

 Score =  674 bits (1740), Expect = 0.0
 Identities = 363/511 (71%), Positives = 406/511 (79%), Gaps = 7/511 (1%)
 Frame = -3

Query: 1672 MMATTAVIGLSSGKRLLSSNFYCSDFVEKLACNSDHVLPQHQLLPSTKNVITAKKSSNYG 1493
            MMAT AVIGLS+GKRLL+S+FY SD  EKL   +DH    H    STKNV+TA+K SN  
Sbjct: 1    MMATAAVIGLSTGKRLLNSSFYYSDITEKLFHLNDHHGFLHCHFSSTKNVVTARKPSNCS 60

Query: 1492 PTF-LSNRHPQSIKALKEHVDTASNPCSV-EQWPQG-----EENSDPDYLVDAFLLLQKS 1334
              F  SNR  QSI+ALKEHV TAS P S  +QW Q      EE+SD +Y V+A LLLQKS
Sbjct: 61   SRFPSSNRPQQSIRALKEHVHTASAPSSATQQWFQELNDLEEESSDLEYSVEALLLLQKS 120

Query: 1333 MLEKQWNLSPDTAVITDMPREKAWKKVQVTGSGTSAXXXXXXXXXXXXXRKSSTTLQISK 1154
            MLEKQWNLS +  V+ D   +   KK+ VT SG SA              KS+  +  S 
Sbjct: 121  MLEKQWNLSFEKKVLRDSTSKTTDKKIPVTCSGVSARQRRMTSTKRKTLNKSTCVMHPST 180

Query: 1153 GKQLRSVISPELHQNRLKGYVKGVVSEELLTHVEVVQLSKKIKAGLLLEEHKSRLKERLG 974
             K LR+++SPEL QNR+KGYVKGV+SE+LLTH EVV+LSKKIK GL +EEHKSRLKERLG
Sbjct: 181  NKPLRAIVSPELLQNRVKGYVKGVLSEDLLTHTEVVRLSKKIKVGLSVEEHKSRLKERLG 240

Query: 973  CDPSDEQLATSLRITRAELQSKFIECSLAREKLTMSNIRLVMSIAQRYDNMGAEMADXXX 794
            C+PSDEQLATSLRI+RA+LQSK IEC LAREKL MSN+RLVMSIAQRYDNMGAEMAD   
Sbjct: 241  CEPSDEQLATSLRISRAQLQSKLIECKLAREKLAMSNVRLVMSIAQRYDNMGAEMADLIQ 300

Query: 793  XXXXXXXXXIEKFDSSKGYKISTYVYWWIRQGVSRALVRNSRTLRLPTHLHERLSLIRNA 614
                     IEKFDSSKG+KISTYVYWWIRQGVSRALV NSRTLRLPTHLHERL LIRNA
Sbjct: 301  GGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNA 360

Query: 613  KAKLEEKGITPSVDRIAECLNMSQKKVRNATEAISKVFSLDREAFPSLNGLPGETLHSYI 434
            K +LEEKGITPS+DRIAE LNMS+KKVRNATEAISKVFSLDR+AFPSLNGLPGET HSYI
Sbjct: 361  KIRLEEKGITPSIDRIAESLNMSKKKVRNATEAISKVFSLDRDAFPSLNGLPGETHHSYI 420

Query: 433  ADTRIENNPWHGVDEWALKDEVDKLLSSTLREREQEIIRLYYGLENECLTWEDISRRIGL 254
            AD R+EN PWHGVD WALK+EV KL++  L ERE+EII+LYYGLENECLTWEDIS+RIGL
Sbjct: 421  ADNRLENIPWHGVDAWALKEEVSKLINMMLGEREREIIQLYYGLENECLTWEDISKRIGL 480

Query: 253  SRERVRQVGLVALEKLKHAARKRRLDAMLLK 161
            SRERVRQVGLVALEKLKHAARKR ++AMLLK
Sbjct: 481  SRERVRQVGLVALEKLKHAARKREMEAMLLK 511


>ref|XP_012070278.1| PREDICTED: RNA polymerase sigma factor sigA [Jatropha curcas]
            gi|802585167|ref|XP_012070279.1| PREDICTED: RNA
            polymerase sigma factor sigA [Jatropha curcas]
            gi|643732469|gb|KDP39565.1| hypothetical protein
            JCGZ_02585 [Jatropha curcas]
          Length = 508

 Score =  673 bits (1736), Expect = 0.0
 Identities = 366/509 (71%), Positives = 409/509 (80%), Gaps = 6/509 (1%)
 Frame = -3

Query: 1669 MATTAVIGLSSGKRLLSSNFYCSDFVEKLACNSDHVLPQHQLLPSTKNVITAKKSSNYGP 1490
            MAT AVIGL +GKRLLSS FY SD  EKL   +DH L  +Q   STKNVI AKKSSNYG 
Sbjct: 1    MATAAVIGLHAGKRLLSSTFYYSDLTEKLFNVNDHGLTHYQS-SSTKNVIVAKKSSNYGS 59

Query: 1489 TFLS-NRHPQSIKALKEHVDTASNPCSV----EQWPQGEE-NSDPDYLVDAFLLLQKSML 1328
            +F S NR+ QSIKALKEHVDTAS+P +     E +   EE +SD DY V+A LLLQKSML
Sbjct: 60   SFQSSNRNAQSIKALKEHVDTASSPSTAATGFETFVDIEEASSDLDYSVEALLLLQKSML 119

Query: 1327 EKQWNLSPDTAVITDMPREKAWKKVQVTGSGTSAXXXXXXXXXXXXXRKSSTTLQISKGK 1148
            EKQWNLS +    +D P  K+ K++ +T SG SA              +S + +Q S  K
Sbjct: 120  EKQWNLSFERTASSDSPSTKSQKQIPITCSGLSARQRRINTRRKNLI-QSKSIVQASGFK 178

Query: 1147 QLRSVISPELHQNRLKGYVKGVVSEELLTHVEVVQLSKKIKAGLLLEEHKSRLKERLGCD 968
            QL+S +SPEL  NRLKGYVKG+VSEELLTH EVV LS+ IKAGL LEEHKSRLK+RLGCD
Sbjct: 179  QLKSAVSPELLLNRLKGYVKGIVSEELLTHAEVVSLSRIIKAGLSLEEHKSRLKDRLGCD 238

Query: 967  PSDEQLATSLRITRAELQSKFIECSLAREKLTMSNIRLVMSIAQRYDNMGAEMADXXXXX 788
            PSDEQLATSLRI+ A+L+SK I CSLAREKL MSN+RLVMSIAQRYDNMGAEMAD     
Sbjct: 239  PSDEQLATSLRISLADLRSKLIACSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGG 298

Query: 787  XXXXXXXIEKFDSSKGYKISTYVYWWIRQGVSRALVRNSRTLRLPTHLHERLSLIRNAKA 608
                   IEKFDSSKG+KISTYVYWWIRQGVSRALV NSRTLRLP HLHERL LIRNAK 
Sbjct: 299  LIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPNHLHERLGLIRNAKI 358

Query: 607  KLEEKGITPSVDRIAECLNMSQKKVRNATEAISKVFSLDREAFPSLNGLPGETLHSYIAD 428
            +LEEKG+TPS+DRIAE LNMSQKKVRNATEAISKVFSLDREAFPSLNGLPGET HSYIAD
Sbjct: 359  RLEEKGVTPSIDRIAESLNMSQKKVRNATEAISKVFSLDREAFPSLNGLPGETHHSYIAD 418

Query: 427  TRIENNPWHGVDEWALKDEVDKLLSSTLREREQEIIRLYYGLENECLTWEDISRRIGLSR 248
               ENNPWHGVDEWALKDEV+KL+  TL++RE+EIIRLYYGL+NE LTWEDIS+RIGLSR
Sbjct: 419  NCPENNPWHGVDEWALKDEVNKLIDLTLQQREREIIRLYYGLDNETLTWEDISKRIGLSR 478

Query: 247  ERVRQVGLVALEKLKHAARKRRLDAMLLK 161
            ERVRQVGLVALEKLKHAARK++L+AML+K
Sbjct: 479  ERVRQVGLVALEKLKHAARKKKLEAMLVK 507


>ref|XP_007219023.1| hypothetical protein PRUPE_ppa004393mg [Prunus persica]
            gi|462415485|gb|EMJ20222.1| hypothetical protein
            PRUPE_ppa004393mg [Prunus persica]
          Length = 512

 Score =  673 bits (1736), Expect = 0.0
 Identities = 362/511 (70%), Positives = 405/511 (79%), Gaps = 7/511 (1%)
 Frame = -3

Query: 1672 MMATTAVIGLSSGKRLLSSNFYCSDFVEKLACNSDHVLPQHQLLPSTKNVITAKKSSNYG 1493
            MMAT AVIGLS+GKRLL+S+FY SD  EKL   +DH    H    STKNV+TA+K SN  
Sbjct: 1    MMATAAVIGLSTGKRLLNSSFYYSDITEKLFHLNDHHGFLHCHFSSTKNVVTARKPSNCS 60

Query: 1492 PTF-LSNRHPQSIKALKEHVDTASNPCSV-EQWPQG-----EENSDPDYLVDAFLLLQKS 1334
              F  SNR  QSI+ALKEHV TAS P S  +QW Q      EE+SD +Y V+A LLLQKS
Sbjct: 61   SRFPSSNRPQQSIRALKEHVQTASAPSSATQQWFQELNDLEEESSDLEYSVEALLLLQKS 120

Query: 1333 MLEKQWNLSPDTAVITDMPREKAWKKVQVTGSGTSAXXXXXXXXXXXXXRKSSTTLQISK 1154
            MLEKQWNLS +  V+ D   +   KK+ VT SG SA              KS+  +  S 
Sbjct: 121  MLEKQWNLSFEKKVLRDSTSKTTDKKIPVTCSGVSARQRRMTSTKRKTFNKSTCVMHPST 180

Query: 1153 GKQLRSVISPELHQNRLKGYVKGVVSEELLTHVEVVQLSKKIKAGLLLEEHKSRLKERLG 974
             K LR+++SPEL QN +KGYVKGV+SE+LLTH EVV+LSKKIK GL +EEHKSRLKERLG
Sbjct: 181  NKPLRAIVSPELLQNHVKGYVKGVLSEDLLTHTEVVRLSKKIKVGLSVEEHKSRLKERLG 240

Query: 973  CDPSDEQLATSLRITRAELQSKFIECSLAREKLTMSNIRLVMSIAQRYDNMGAEMADXXX 794
            C+PSDEQLATSLRI+RA+LQSK IEC LAREKL MSN+RLVMSIAQRYDNMGAEMAD   
Sbjct: 241  CEPSDEQLATSLRISRAQLQSKLIECKLAREKLAMSNVRLVMSIAQRYDNMGAEMADLIQ 300

Query: 793  XXXXXXXXXIEKFDSSKGYKISTYVYWWIRQGVSRALVRNSRTLRLPTHLHERLSLIRNA 614
                     IEKFDSSKG+KISTYVYWWIRQGVSRALV NSRTLRLPTHLHERL LIRNA
Sbjct: 301  GGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNA 360

Query: 613  KAKLEEKGITPSVDRIAECLNMSQKKVRNATEAISKVFSLDREAFPSLNGLPGETLHSYI 434
            K +LEEKGITPS+DRIAE LNMS+KKVRNATEAISKVFSLDR+AFPSLNGLPGET HSYI
Sbjct: 361  KIRLEEKGITPSIDRIAESLNMSKKKVRNATEAISKVFSLDRDAFPSLNGLPGETHHSYI 420

Query: 433  ADTRIENNPWHGVDEWALKDEVDKLLSSTLREREQEIIRLYYGLENECLTWEDISRRIGL 254
            AD R+EN PWHGVD WALK+EV KL++  L ERE+EII+LYYGLENECLTWEDIS+RIGL
Sbjct: 421  ADNRLENIPWHGVDAWALKEEVSKLINMMLGEREKEIIQLYYGLENECLTWEDISKRIGL 480

Query: 253  SRERVRQVGLVALEKLKHAARKRRLDAMLLK 161
            SRERVRQVGLVALEKLKHAARKR ++AMLLK
Sbjct: 481  SRERVRQVGLVALEKLKHAARKREMEAMLLK 511


>gb|KDO48032.1| hypothetical protein CISIN_1g010521mg [Citrus sinensis]
            gi|641828897|gb|KDO48033.1| hypothetical protein
            CISIN_1g010521mg [Citrus sinensis]
          Length = 508

 Score =  672 bits (1733), Expect = 0.0
 Identities = 365/510 (71%), Positives = 407/510 (79%), Gaps = 6/510 (1%)
 Frame = -3

Query: 1672 MMATTAVIGLSSGKRLLSSNFYCSDFVEKLACNSDHVLPQHQLLPSTKNVITAKKSSNYG 1493
            MMAT AVIGLS+GKRLLSS+FY SD  EK +  +D      Q+  STKNV+ AKKSSNY 
Sbjct: 1    MMATAAVIGLSAGKRLLSSSFYYSDISEKFSYINDLGSANSQV-GSTKNVVAAKKSSNYN 59

Query: 1492 PTF-LSNRHPQSIKALKEHVDTASNPCSVEQWPQG-----EENSDPDYLVDAFLLLQKSM 1331
            P+F  SNR  Q IKALKEHVDT +   + E W +      EE+S+ DY V+A LLLQKSM
Sbjct: 60   PSFPSSNRQTQPIKALKEHVDT-NFASTAEPWAEPPNSIEEESSELDYSVEALLLLQKSM 118

Query: 1330 LEKQWNLSPDTAVITDMPREKAWKKVQVTGSGTSAXXXXXXXXXXXXXRKSSTTLQISKG 1151
            LEKQWNLS +  V+TD P +K  KKV VT SG SA             +  S  LQ +  
Sbjct: 119  LEKQWNLSFERTVLTDSPSKKTHKKVPVTCSGVSARQRRLNSKKKILSQNKSI-LQQNGS 177

Query: 1150 KQLRSVISPELHQNRLKGYVKGVVSEELLTHVEVVQLSKKIKAGLLLEEHKSRLKERLGC 971
            KQLRS+ISPEL QNRLKGYVKGVVSEELLTH EVV+LSKKIK GL L++HK RLKERLGC
Sbjct: 178  KQLRSMISPELIQNRLKGYVKGVVSEELLTHAEVVRLSKKIKTGLSLDDHKLRLKERLGC 237

Query: 970  DPSDEQLATSLRITRAELQSKFIECSLAREKLTMSNIRLVMSIAQRYDNMGAEMADXXXX 791
            +PS EQLA SLRI+R ELQS  +ECSLAREKL MSN+RLVMSIAQRYDNMGA+MAD    
Sbjct: 238  EPSMEQLAASLRISRPELQSILMECSLAREKLVMSNVRLVMSIAQRYDNMGADMADLVQG 297

Query: 790  XXXXXXXXIEKFDSSKGYKISTYVYWWIRQGVSRALVRNSRTLRLPTHLHERLSLIRNAK 611
                    IEKFDSSKG+KISTYVYWWIRQGVSRALV NSRTLRLP HLHERL LIRNAK
Sbjct: 298  GLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPNHLHERLGLIRNAK 357

Query: 610  AKLEEKGITPSVDRIAECLNMSQKKVRNATEAISKVFSLDREAFPSLNGLPGETLHSYIA 431
             +LEEKG+TPSVDRIAE LNMSQKKVRNATEAI KVFSLDREAFPSLNGLPGET HSYIA
Sbjct: 358  LRLEEKGVTPSVDRIAEYLNMSQKKVRNATEAIGKVFSLDREAFPSLNGLPGETHHSYIA 417

Query: 430  DTRIENNPWHGVDEWALKDEVDKLLSSTLREREQEIIRLYYGLENECLTWEDISRRIGLS 251
            D R+ENNPWHGVD+WALKDEV+KL+  TL ERE+EIIRLYYGL+ ECLTWEDIS+RIGLS
Sbjct: 418  DNRVENNPWHGVDDWALKDEVNKLIIVTLGEREREIIRLYYGLDKECLTWEDISKRIGLS 477

Query: 250  RERVRQVGLVALEKLKHAARKRRLDAMLLK 161
            RERVRQVGLVALEKLKHAARK++++AML+K
Sbjct: 478  RERVRQVGLVALEKLKHAARKKKMEAMLVK 507


>gb|AKC88633.1| sigma factor [Melianthus villosus]
          Length = 506

 Score =  671 bits (1732), Expect = 0.0
 Identities = 354/509 (69%), Positives = 405/509 (79%), Gaps = 6/509 (1%)
 Frame = -3

Query: 1669 MATTAVIGLSSGKRLLSSNFYCSDFVEKLACNSDHVLPQHQLLPSTKNVITAKKSSNYGP 1490
            MAT AVIGLS+GKRLLSS+ Y SD+ EKL+  +DH    H     TK V+ AKKSSN  P
Sbjct: 1    MATAAVIGLSAGKRLLSSSLYYSDYAEKLSYANDH---GHYNATPTKTVVIAKKSSNCSP 57

Query: 1489 TF-LSNRHPQSIKALKEHVDTASNPCSVEQWPQ-----GEENSDPDYLVDAFLLLQKSML 1328
             F  SNR  QSIKALKEHVD  S P + E W Q      E+N D +Y V+A LLLQKSML
Sbjct: 58   RFPSSNRKTQSIKALKEHVDDISGPSTAESWFQRSNDVDEQNFDIEYSVEALLLLQKSML 117

Query: 1327 EKQWNLSPDTAVITDMPREKAWKKVQVTGSGTSAXXXXXXXXXXXXXRKSSTTLQISKGK 1148
            EKQWNLS D  ++TD+ +EK  K++ VT SG SA               SS  +Q S+  
Sbjct: 118  EKQWNLSFDKTMLTDLVKEKTCKRIPVTCSGVSARQRRMSNKRKILSENSSM-MQTSRCN 176

Query: 1147 QLRSVISPELHQNRLKGYVKGVVSEELLTHVEVVQLSKKIKAGLLLEEHKSRLKERLGCD 968
            +LR++I PEL QNR KGYVKGVVSEELL+H EVV LSKKIK GL LEEHK RLK+RLGC+
Sbjct: 177  RLRTIIGPELMQNRFKGYVKGVVSEELLSHAEVVHLSKKIKCGLSLEEHKLRLKKRLGCE 236

Query: 967  PSDEQLATSLRITRAELQSKFIECSLAREKLTMSNIRLVMSIAQRYDNMGAEMADXXXXX 788
            PSDEQLATSLRI+RAEL+SK+IE  LAREKL MSN+RLVMSIAQRYDNMGAEM+D     
Sbjct: 237  PSDEQLATSLRISRAELRSKWIESGLAREKLAMSNVRLVMSIAQRYDNMGAEMSDLVQGG 296

Query: 787  XXXXXXXIEKFDSSKGYKISTYVYWWIRQGVSRALVRNSRTLRLPTHLHERLSLIRNAKA 608
                   IEKFDS+KG+KISTYVYWWIRQGVSRAL+ NSRTLRLPTHLHERL LIRNAK 
Sbjct: 297  LIGLLRGIEKFDSAKGFKISTYVYWWIRQGVSRALIENSRTLRLPTHLHERLGLIRNAKI 356

Query: 607  KLEEKGITPSVDRIAECLNMSQKKVRNATEAISKVFSLDREAFPSLNGLPGETLHSYIAD 428
            +LEEKGITPS++R+AECLNMS+KK+RNATEAISKVFSLDREAFPSLNGLPGET HSYIAD
Sbjct: 357  RLEEKGITPSIERLAECLNMSKKKIRNATEAISKVFSLDREAFPSLNGLPGETHHSYIAD 416

Query: 427  TRIENNPWHGVDEWALKDEVDKLLSSTLREREQEIIRLYYGLENECLTWEDISRRIGLSR 248
              ++NNPWHGVDEWALKDEV KL+  TL ERE+EIIRLY+GL+NECLTWEDIS+RIGLSR
Sbjct: 417  NCLDNNPWHGVDEWALKDEVKKLIEMTLGEREREIIRLYHGLDNECLTWEDISKRIGLSR 476

Query: 247  ERVRQVGLVALEKLKHAARKRRLDAMLLK 161
            ERVRQVGLVA+EKLKHAAR++ ++AML+K
Sbjct: 477  ERVRQVGLVAMEKLKHAARRKHMEAMLVK 505


>ref|XP_006437403.1| hypothetical protein CICLE_v10031289mg [Citrus clementina]
            gi|557539599|gb|ESR50643.1| hypothetical protein
            CICLE_v10031289mg [Citrus clementina]
          Length = 508

 Score =  669 bits (1726), Expect = 0.0
 Identities = 363/510 (71%), Positives = 406/510 (79%), Gaps = 6/510 (1%)
 Frame = -3

Query: 1672 MMATTAVIGLSSGKRLLSSNFYCSDFVEKLACNSDHVLPQHQLLPSTKNVITAKKSSNYG 1493
            MMAT AVIGLS+GKRLLSS+FY SD  EK +  +D      Q+  STKNV+ AKKSSNY 
Sbjct: 1    MMATAAVIGLSAGKRLLSSSFYYSDISEKFSYINDLGSANSQV-GSTKNVVAAKKSSNYN 59

Query: 1492 PTF-LSNRHPQSIKALKEHVDTASNPCSVEQWPQG-----EENSDPDYLVDAFLLLQKSM 1331
            P+F  SNR  Q IKALKEHVDT +   + E W +      EE+S+ DY V+A LLLQKSM
Sbjct: 60   PSFPSSNRQTQPIKALKEHVDT-NFASTAEPWAEPPNSIEEESSELDYSVEALLLLQKSM 118

Query: 1330 LEKQWNLSPDTAVITDMPREKAWKKVQVTGSGTSAXXXXXXXXXXXXXRKSSTTLQISKG 1151
            LEKQWNLS +  V+TD P +K  KKV VT SG SA             +  S  LQ +  
Sbjct: 119  LEKQWNLSFERTVLTDSPSKKTHKKVPVTCSGVSARQRRLNSKKKILSQNKSV-LQQNGS 177

Query: 1150 KQLRSVISPELHQNRLKGYVKGVVSEELLTHVEVVQLSKKIKAGLLLEEHKSRLKERLGC 971
            KQLRS+ISPEL QN LKGYVKGVVSEELLTH EVV+LSKKIK GL L++HK RLKERLGC
Sbjct: 178  KQLRSMISPELIQNHLKGYVKGVVSEELLTHAEVVRLSKKIKTGLSLDDHKLRLKERLGC 237

Query: 970  DPSDEQLATSLRITRAELQSKFIECSLAREKLTMSNIRLVMSIAQRYDNMGAEMADXXXX 791
            +PS EQLA SLRI+R ELQS  +ECSLAREKL MSN+RLVMSIAQRYDNMGA+MAD    
Sbjct: 238  EPSMEQLAASLRISRPELQSILMECSLAREKLVMSNVRLVMSIAQRYDNMGADMADLIQG 297

Query: 790  XXXXXXXXIEKFDSSKGYKISTYVYWWIRQGVSRALVRNSRTLRLPTHLHERLSLIRNAK 611
                    IEKFDSSKG+KISTYVYWWIRQGVSRALV NSRTLRLP HLHERL LIRNAK
Sbjct: 298  GLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPNHLHERLGLIRNAK 357

Query: 610  AKLEEKGITPSVDRIAECLNMSQKKVRNATEAISKVFSLDREAFPSLNGLPGETLHSYIA 431
             +LEEKG+TP+VDRIAE LNMSQKKVRNATEAI KVFSLDREAFPSLNGLPGET HSYIA
Sbjct: 358  LRLEEKGVTPAVDRIAEYLNMSQKKVRNATEAIGKVFSLDREAFPSLNGLPGETHHSYIA 417

Query: 430  DTRIENNPWHGVDEWALKDEVDKLLSSTLREREQEIIRLYYGLENECLTWEDISRRIGLS 251
            D R+ENNPWHGVD+WALKDEV+KL+  TL ERE+EIIRLYYGL+ ECLTWEDIS+RIGLS
Sbjct: 418  DNRVENNPWHGVDDWALKDEVNKLIIVTLGEREREIIRLYYGLDKECLTWEDISKRIGLS 477

Query: 250  RERVRQVGLVALEKLKHAARKRRLDAMLLK 161
            RERVRQVGLVALEKLKHAARK++++AML+K
Sbjct: 478  RERVRQVGLVALEKLKHAARKKKMEAMLVK 507


>ref|XP_006484698.1| PREDICTED: RNA polymerase sigma factor sigA-like isoform X1 [Citrus
            sinensis] gi|568862456|ref|XP_006484699.1| PREDICTED: RNA
            polymerase sigma factor sigA-like isoform X2 [Citrus
            sinensis] gi|568862458|ref|XP_006484700.1| PREDICTED: RNA
            polymerase sigma factor sigA-like isoform X3 [Citrus
            sinensis]
          Length = 508

 Score =  669 bits (1725), Expect = 0.0
 Identities = 363/510 (71%), Positives = 405/510 (79%), Gaps = 6/510 (1%)
 Frame = -3

Query: 1672 MMATTAVIGLSSGKRLLSSNFYCSDFVEKLACNSDHVLPQHQLLPSTKNVITAKKSSNYG 1493
            MMAT AVIGLS+GKRLLSS+FY SD  EK +  +D      Q+  STKNV+ AKKSSNY 
Sbjct: 1    MMATAAVIGLSAGKRLLSSSFYYSDISEKFSYINDLGSANSQV-GSTKNVVAAKKSSNYN 59

Query: 1492 PTF-LSNRHPQSIKALKEHVDTASNPCSVEQWPQG-----EENSDPDYLVDAFLLLQKSM 1331
            P+F  SNR  Q IKALKEHVDT +   + E W +      EE+S+ DY V+A LLLQKSM
Sbjct: 60   PSFPSSNRQTQPIKALKEHVDT-NFASTAEPWAEPPNSIEEESSELDYSVEALLLLQKSM 118

Query: 1330 LEKQWNLSPDTAVITDMPREKAWKKVQVTGSGTSAXXXXXXXXXXXXXRKSSTTLQISKG 1151
            LEKQWNLS +  V+TD P +K  KKV VT SG SA             +  S   Q +  
Sbjct: 119  LEKQWNLSFERTVLTDSPSKKTHKKVPVTCSGVSARQRRLNSKKKILSQNKSVPQQ-NGS 177

Query: 1150 KQLRSVISPELHQNRLKGYVKGVVSEELLTHVEVVQLSKKIKAGLLLEEHKSRLKERLGC 971
            KQLRS+ISPEL QN LKGYVKGVVSEELLTH EVV+LSKKIK GL L++HK RLKERLGC
Sbjct: 178  KQLRSMISPELIQNHLKGYVKGVVSEELLTHAEVVRLSKKIKTGLSLDDHKLRLKERLGC 237

Query: 970  DPSDEQLATSLRITRAELQSKFIECSLAREKLTMSNIRLVMSIAQRYDNMGAEMADXXXX 791
            +PS EQLA SLRI+R ELQS  +ECSLAREKL MSN+RLVMSIAQRYDNMGA+MAD    
Sbjct: 238  EPSMEQLAASLRISRPELQSILMECSLAREKLVMSNVRLVMSIAQRYDNMGADMADLVQG 297

Query: 790  XXXXXXXXIEKFDSSKGYKISTYVYWWIRQGVSRALVRNSRTLRLPTHLHERLSLIRNAK 611
                    IEKFDSSKG+KISTYVYWWIRQGVSRALV NSRTLRLP HLHERL LIRNAK
Sbjct: 298  GLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPNHLHERLGLIRNAK 357

Query: 610  AKLEEKGITPSVDRIAECLNMSQKKVRNATEAISKVFSLDREAFPSLNGLPGETLHSYIA 431
             +LEEKG+TPSVDRIAE LNMSQKKVRNATEAI KVFSLDREAFPSLNGLPGET HSYIA
Sbjct: 358  LRLEEKGVTPSVDRIAEYLNMSQKKVRNATEAIGKVFSLDREAFPSLNGLPGETHHSYIA 417

Query: 430  DTRIENNPWHGVDEWALKDEVDKLLSSTLREREQEIIRLYYGLENECLTWEDISRRIGLS 251
            D R+ENNPWHGVD+WALKDEV+KL+  TL ERE+EIIRLYYGL+ ECLTWEDIS+RIGLS
Sbjct: 418  DNRVENNPWHGVDDWALKDEVNKLIIVTLGEREREIIRLYYGLDKECLTWEDISKRIGLS 477

Query: 250  RERVRQVGLVALEKLKHAARKRRLDAMLLK 161
            RERVRQVGLVALEKLKHAARK++++AML+K
Sbjct: 478  RERVRQVGLVALEKLKHAARKKKMEAMLVK 507


>emb|CDP04910.1| unnamed protein product [Coffea canephora]
          Length = 503

 Score =  664 bits (1714), Expect = 0.0
 Identities = 351/507 (69%), Positives = 400/507 (78%), Gaps = 4/507 (0%)
 Frame = -3

Query: 1669 MATTAVIGLSSGKRLLSSNFYCSD-FVEKLACNSDHVLPQHQLLPSTKNVITAKKSSNYG 1493
            MAT AVIGLS GKRLLSS  Y SD F +KL+C  DH LP      S+ +V+ AK+SSN+ 
Sbjct: 1    MATAAVIGLSPGKRLLSSASYYSDLFSDKLSCTCDHFLPV-----SSNSVLAAKRSSNFS 55

Query: 1492 PTFLSNRHPQSIKALKEHVDTASNPCSVEQWPQ---GEENSDPDYLVDAFLLLQKSMLEK 1322
            P FLS    Q   ALKEH +TA +  S++ W      EE  DP++ + A LLLQKSMLEK
Sbjct: 56   PKFLSRHKTQPTYALKEHAETAPDLSSIQPWLHVNADEEFLDPEFSMQALLLLQKSMLEK 115

Query: 1321 QWNLSPDTAVITDMPREKAWKKVQVTGSGTSAXXXXXXXXXXXXXRKSSTTLQISKGKQL 1142
            QWNLS +   +           VQVT SG+SA              + S+  Q+   + L
Sbjct: 116  QWNLSAENDYLVTGTPPTGKTCVQVTSSGSSARRRRIDSRRHPLSSRKSSVRQLRLSRHL 175

Query: 1141 RSVISPELHQNRLKGYVKGVVSEELLTHVEVVQLSKKIKAGLLLEEHKSRLKERLGCDPS 962
            RS+ISPEL QNRL GYVKGVVSEELLTH EVVQLS+KIK GL  EE K+RL++RLGC+PS
Sbjct: 176  RSIISPELLQNRLNGYVKGVVSEELLTHTEVVQLSEKIKQGLCFEEQKARLRKRLGCEPS 235

Query: 961  DEQLATSLRITRAELQSKFIECSLAREKLTMSNIRLVMSIAQRYDNMGAEMADXXXXXXX 782
            +EQLATSL+ITRA+LQSKFIECSLARE+L MSN+RLVMSIAQRYDNMGAEMAD       
Sbjct: 236  EEQLATSLKITRADLQSKFIECSLARERLAMSNVRLVMSIAQRYDNMGAEMADLIQGGLI 295

Query: 781  XXXXXIEKFDSSKGYKISTYVYWWIRQGVSRALVRNSRTLRLPTHLHERLSLIRNAKAKL 602
                 IEK+DSSKG+KISTYVYWWIRQGVSRALV NSRTLRLPTHLHERLSLIRNAK +L
Sbjct: 296  GLLRGIEKYDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLSLIRNAKIRL 355

Query: 601  EEKGITPSVDRIAECLNMSQKKVRNATEAISKVFSLDREAFPSLNGLPGETLHSYIADTR 422
            EEKGITPSVD+IAE LNMSQKKVRNATEA+ KV SLDREAFPSLNGLPGETLHSYIAD R
Sbjct: 356  EEKGITPSVDKIAESLNMSQKKVRNATEAVCKVISLDREAFPSLNGLPGETLHSYIADNR 415

Query: 421  IENNPWHGVDEWALKDEVDKLLSSTLREREQEIIRLYYGLENECLTWEDISRRIGLSRER 242
            +ENNPWHGVD+WALKDEV+KL++STLRERE++IIRLYYGLENECLTWEDIS+RIGLSRER
Sbjct: 416  LENNPWHGVDQWALKDEVNKLITSTLRERERDIIRLYYGLENECLTWEDISKRIGLSRER 475

Query: 241  VRQVGLVALEKLKHAARKRRLDAMLLK 161
            VRQVGLVALEKLK+AARKRRL+AM+ +
Sbjct: 476  VRQVGLVALEKLKYAARKRRLEAMIAR 502


>ref|XP_002325882.1| RNA POLYMERASE SIGMA SUBUNIT 1 family protein [Populus trichocarpa]
            gi|222862757|gb|EEF00264.1| RNA POLYMERASE SIGMA SUBUNIT
            1 family protein [Populus trichocarpa]
          Length = 509

 Score =  664 bits (1712), Expect = 0.0
 Identities = 360/510 (70%), Positives = 407/510 (79%), Gaps = 6/510 (1%)
 Frame = -3

Query: 1672 MMATTAVIGLSSGKRLLSSNFYCSDFVEKLACNSDHVLPQHQLLPSTKNVITAKKSSNYG 1493
            MMAT AVIGLSSGKRLLSS+FY SD  EKL+  +DH +  +    +TKNVI AKKSSNYG
Sbjct: 1    MMATAAVIGLSSGKRLLSSSFYYSDLTEKLSNVNDHGITYYPTA-TTKNVIVAKKSSNYG 59

Query: 1492 PTF-LSNRHPQSIKALKEHVDTASNPCSVEQWPQG-----EENSDPDYLVDAFLLLQKSM 1331
            P+F  SNR+  SIKALKEHVDTAS   +V  W +      EE+S  DY V+A LLLQKSM
Sbjct: 60   PSFPSSNRNSHSIKALKEHVDTASASSNVATWFKTFDDFEEESSALDYSVEALLLLQKSM 119

Query: 1330 LEKQWNLSPDTAVITDMPREKAWKKVQVTGSGTSAXXXXXXXXXXXXXRKSSTTLQISKG 1151
            LEKQWNLS +    +D   +K  KK+ VT SG SA              +S    Q S  
Sbjct: 120  LEKQWNLSFERTNSSDSTSKKNNKKIPVTCSGVSARQRRVNNRRKNQN-QSKFMSQSSDF 178

Query: 1150 KQLRSVISPELHQNRLKGYVKGVVSEELLTHVEVVQLSKKIKAGLLLEEHKSRLKERLGC 971
            K LRSV SP+L QNRLKGYVKGVVS+E+L H EVV+LS+ I+AGL  E+HKSRLKERLGC
Sbjct: 179  KFLRSVSSPDLLQNRLKGYVKGVVSDEVLPHTEVVRLSRIIRAGLSFEDHKSRLKERLGC 238

Query: 970  DPSDEQLATSLRITRAELQSKFIECSLAREKLTMSNIRLVMSIAQRYDNMGAEMADXXXX 791
            +PSDEQ+A SLRI+RA+LQSK I+CSLAREKL MSN+RLVMSIAQ+YDNMGAEMAD    
Sbjct: 239  EPSDEQIADSLRISRADLQSKLIQCSLAREKLAMSNVRLVMSIAQKYDNMGAEMADLVQG 298

Query: 790  XXXXXXXXIEKFDSSKGYKISTYVYWWIRQGVSRALVRNSRTLRLPTHLHERLSLIRNAK 611
                    IEKFDSSKG+KISTYVYWWIRQGVSRALV NSRTLRLP HLHERL LIRNAK
Sbjct: 299  GLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVDNSRTLRLPNHLHERLGLIRNAK 358

Query: 610  AKLEEKGITPSVDRIAECLNMSQKKVRNATEAISKVFSLDREAFPSLNGLPGETLHSYIA 431
             +LEEKG+TPS+DRIAE LNMSQ+KVRNATEAISKVFSLDREAFPSLNGLPGET HSYIA
Sbjct: 359  IRLEEKGVTPSIDRIAESLNMSQRKVRNATEAISKVFSLDREAFPSLNGLPGETHHSYIA 418

Query: 430  DTRIENNPWHGVDEWALKDEVDKLLSSTLREREQEIIRLYYGLENECLTWEDISRRIGLS 251
            D R ENNPWHGVDEWALK+EV+KL+ STL+ERE+EIIRLY+GL+ ECLTWEDIS+R+GLS
Sbjct: 419  DNRPENNPWHGVDEWALKEEVNKLIDSTLQEREKEIIRLYHGLDQECLTWEDISKRMGLS 478

Query: 250  RERVRQVGLVALEKLKHAARKRRLDAMLLK 161
            RERVRQVGLVALEKLKHAARKR  +AML+K
Sbjct: 479  RERVRQVGLVALEKLKHAARKRNTEAMLVK 508


>ref|XP_011012457.1| PREDICTED: RNA polymerase sigma factor sigA [Populus euphratica]
            gi|743936142|ref|XP_011012458.1| PREDICTED: RNA
            polymerase sigma factor sigA [Populus euphratica]
          Length = 509

 Score =  662 bits (1708), Expect = 0.0
 Identities = 358/510 (70%), Positives = 407/510 (79%), Gaps = 6/510 (1%)
 Frame = -3

Query: 1672 MMATTAVIGLSSGKRLLSSNFYCSDFVEKLACNSDHVLPQHQLLPSTKNVITAKKSSNYG 1493
            MMAT AVIGLS+GKRLLSS+FY SD  EKL+  +DH +  +    +TKNV+ AKKSSNYG
Sbjct: 1    MMATAAVIGLSTGKRLLSSSFYYSDLTEKLSSVNDHGIT-YCPTATTKNVVVAKKSSNYG 59

Query: 1492 PTF-LSNRHPQSIKALKEHVDTASNPCSVEQWPQG-----EENSDPDYLVDAFLLLQKSM 1331
            P F  SNR+  SIKALKEHVDTAS   +V  W +      EE+S  DY V+A LLLQKSM
Sbjct: 60   PNFPSSNRNSHSIKALKEHVDTASASSNVATWFKTFDDFEEESSALDYSVEALLLLQKSM 119

Query: 1330 LEKQWNLSPDTAVITDMPREKAWKKVQVTGSGTSAXXXXXXXXXXXXXRKSSTTLQISKG 1151
            LEKQWNLS +    +D   +K  KK+ VT SG SA              +S    Q S  
Sbjct: 120  LEKQWNLSFERTNSSDSTSKKNNKKIPVTCSGVSARQRRVNNRRKNQN-QSKFMSQSSDF 178

Query: 1150 KQLRSVISPELHQNRLKGYVKGVVSEELLTHVEVVQLSKKIKAGLLLEEHKSRLKERLGC 971
            K LRSVISP+L QNRLKGYVKGVVS+E+L H EVV+LS+ I+AGL  E+HKSRLKERLGC
Sbjct: 179  KFLRSVISPDLLQNRLKGYVKGVVSDEVLPHTEVVRLSRIIRAGLSFEDHKSRLKERLGC 238

Query: 970  DPSDEQLATSLRITRAELQSKFIECSLAREKLTMSNIRLVMSIAQRYDNMGAEMADXXXX 791
            +PSDEQ+A SLRI+RA+LQ+K I+CSLAREKL MSN+RLVMSIAQ+YDNMGAEMAD    
Sbjct: 239  EPSDEQIADSLRISRADLQAKLIQCSLAREKLAMSNVRLVMSIAQKYDNMGAEMADLVQG 298

Query: 790  XXXXXXXXIEKFDSSKGYKISTYVYWWIRQGVSRALVRNSRTLRLPTHLHERLSLIRNAK 611
                    IEKFDSSKG+KISTYVYWWIRQGVSRALV NSRTLRLP HLHERL LIRNAK
Sbjct: 299  GLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVDNSRTLRLPNHLHERLGLIRNAK 358

Query: 610  AKLEEKGITPSVDRIAECLNMSQKKVRNATEAISKVFSLDREAFPSLNGLPGETLHSYIA 431
             +LEEKG+TPS+DRIAE LNMSQ+KVRNATEAISKVFSLDREAFPSLNGLPGET HSYIA
Sbjct: 359  IRLEEKGVTPSIDRIAESLNMSQRKVRNATEAISKVFSLDREAFPSLNGLPGETHHSYIA 418

Query: 430  DTRIENNPWHGVDEWALKDEVDKLLSSTLREREQEIIRLYYGLENECLTWEDISRRIGLS 251
            D R ENNPWHGVDEWALK+EV+KL+ STL+ERE+EIIRLY+GL+ ECLTWEDIS+R+GLS
Sbjct: 419  DNRPENNPWHGVDEWALKEEVNKLIDSTLQEREKEIIRLYHGLDQECLTWEDISKRMGLS 478

Query: 250  RERVRQVGLVALEKLKHAARKRRLDAMLLK 161
            RERVRQVGLVALEKLKHAARKR  +AML+K
Sbjct: 479  RERVRQVGLVALEKLKHAARKRNTEAMLVK 508


>ref|XP_009629626.1| PREDICTED: RNA polymerase sigma factor sigA-like isoform X2
            [Nicotiana tomentosiformis]
          Length = 502

 Score =  661 bits (1706), Expect = 0.0
 Identities = 358/510 (70%), Positives = 397/510 (77%), Gaps = 11/510 (2%)
 Frame = -3

Query: 1657 AVIGLSSGKRLLSSNFYCSDFVEKLACNSDHVLPQHQLLPSTKNVITAKKSSNYGPTFLS 1478
            A+IGLS+G R+LSS+FY SD  EK  C SDH LP H   PS KNVI AK SSNY P+++S
Sbjct: 3    AIIGLSAGNRILSSSFYYSDLTEKF-CVSDHALPCHHF-PSPKNVINAKNSSNYSPSYVS 60

Query: 1477 NRHPQSIKALKEHVDTASNPCS-VEQWPQ----------GEENSDPDYLVDAFLLLQKSM 1331
            NR  QS+KALKEHVD ASN  S  E W Q           EE+S     V+  LLLQKSM
Sbjct: 61   NRKKQSVKALKEHVDIASNRDSDTEPWVQMFKQLQNGSCSEEDS-----VEVLLLLQKSM 115

Query: 1330 LEKQWNLSPDTAVITDMPREKAWKKVQVTGSGTSAXXXXXXXXXXXXXRKSSTTLQISKG 1151
            LEKQWNLS + A+  +       KK+Q+T SGTSA              K+S T   S  
Sbjct: 116  LEKQWNLSAEKAMTNE---NNCKKKMQITCSGTSARRRRMDTRKRDLLPKNSATSD-SSS 171

Query: 1150 KQLRSVISPELHQNRLKGYVKGVVSEELLTHVEVVQLSKKIKAGLLLEEHKSRLKERLGC 971
            K+LRSVI PEL QNR KGY+ GVV +ELLTH EVVQLSKKIK GL LEE KSRLKERLGC
Sbjct: 172  KRLRSVIGPELLQNRSKGYINGVVGQELLTHTEVVQLSKKIKFGLYLEEQKSRLKERLGC 231

Query: 970  DPSDEQLATSLRITRAELQSKFIECSLAREKLTMSNIRLVMSIAQRYDNMGAEMADXXXX 791
            +PSD+QLA SL+I+RA+L+S  IECSLAREKL MSN+RLVMSIAQRYD  G EMAD    
Sbjct: 232  EPSDDQLAISLKISRADLRSTLIECSLAREKLAMSNVRLVMSIAQRYDTNGTEMADLIQG 291

Query: 790  XXXXXXXXIEKFDSSKGYKISTYVYWWIRQGVSRALVRNSRTLRLPTHLHERLSLIRNAK 611
                    IEKFD S+G+KISTYVYWWIRQGVSRALV NSRTLRLP HLHERLSLIRNAK
Sbjct: 292  GLIGLLRGIEKFDHSRGFKISTYVYWWIRQGVSRALVENSRTLRLPIHLHERLSLIRNAK 351

Query: 610  AKLEEKGITPSVDRIAECLNMSQKKVRNATEAISKVFSLDREAFPSLNGLPGETLHSYIA 431
             KL+E GITPS+++IAECLNMSQKKVRNATEA SKVFSLDREAFPSLNGLPGETLHSYIA
Sbjct: 352  IKLKENGITPSIEKIAECLNMSQKKVRNATEASSKVFSLDREAFPSLNGLPGETLHSYIA 411

Query: 430  DTRIENNPWHGVDEWALKDEVDKLLSSTLREREQEIIRLYYGLENECLTWEDISRRIGLS 251
            D R+EN PWHGVDEW LKDEV+ L+SSTLRERE+EI+RLYYGL+NECLTWEDISRRIGLS
Sbjct: 412  DNRLENIPWHGVDEWMLKDEVNNLISSTLREREREIVRLYYGLDNECLTWEDISRRIGLS 471

Query: 250  RERVRQVGLVALEKLKHAARKRRLDAMLLK 161
            RERVRQVGLVALEKLKHAARKRRLDAML+K
Sbjct: 472  RERVRQVGLVALEKLKHAARKRRLDAMLVK 501


>ref|XP_009767654.1| PREDICTED: RNA polymerase sigma factor sigA-like [Nicotiana
            sylvestris]
          Length = 504

 Score =  661 bits (1705), Expect = 0.0
 Identities = 359/511 (70%), Positives = 399/511 (78%), Gaps = 12/511 (2%)
 Frame = -3

Query: 1657 AVIGLSSGKRLLSSNFYCSDFVEKLACNSDHVLPQHQLLPSTKNVITAKKSSNYGPTFLS 1478
            A+IGLS+G R+LSS+F  SD  EKL+C SD   P HQ  PSTKNVI AKKSSNY P+++S
Sbjct: 3    AIIGLSAGNRILSSSFSYSDLTEKLSCASD---PCHQF-PSTKNVINAKKSSNYSPSYVS 58

Query: 1477 NRHPQSIKALKEHVDTASNPCS-VEQWPQ----------GEENSDPDYLVDAFLLLQKSM 1331
            NR  QS+KALKEHVD ASN  S  E W Q           EE+S     V+  LLLQKSM
Sbjct: 59   NRKKQSVKALKEHVDIASNRDSYTEPWVQMFKQLQNGSCSEEDS-----VEVLLLLQKSM 113

Query: 1330 LEKQWNLSPDTAVITDMPREK-AWKKVQVTGSGTSAXXXXXXXXXXXXXRKSSTTLQISK 1154
            LE QWNLS + A+   +  EK + KK+Q+T SGTSA              K+S T   S 
Sbjct: 114  LENQWNLSAEKAMTDSLQNEKNSKKKMQITCSGTSARRRRMDTRKRDLLPKNSATSD-SS 172

Query: 1153 GKQLRSVISPELHQNRLKGYVKGVVSEELLTHVEVVQLSKKIKAGLLLEEHKSRLKERLG 974
             K+LR VI PEL QNR KGY+ GVV +ELLTH EVVQLSKKIK GL LEE KSRLKERLG
Sbjct: 173  SKRLRPVIGPELLQNRSKGYINGVVGQELLTHTEVVQLSKKIKFGLYLEEQKSRLKERLG 232

Query: 973  CDPSDEQLATSLRITRAELQSKFIECSLAREKLTMSNIRLVMSIAQRYDNMGAEMADXXX 794
            C+PSD+QLA SL+I+RA+L+S  IECSLAREKL MSN+RLVMSIAQRYD  G EMAD   
Sbjct: 233  CEPSDDQLAVSLKISRADLRSTLIECSLAREKLAMSNVRLVMSIAQRYDTTGTEMADLIQ 292

Query: 793  XXXXXXXXXIEKFDSSKGYKISTYVYWWIRQGVSRALVRNSRTLRLPTHLHERLSLIRNA 614
                     IEKFD S+G+KISTYVYWWIRQGVSRALV NSRTLRLP HLHERLSLIRNA
Sbjct: 293  GGLIGLLRGIEKFDHSRGFKISTYVYWWIRQGVSRALVENSRTLRLPIHLHERLSLIRNA 352

Query: 613  KAKLEEKGITPSVDRIAECLNMSQKKVRNATEAISKVFSLDREAFPSLNGLPGETLHSYI 434
            K KL+E GITPS+++IAECLNMSQKKVRNATEA SKVFSLDREAFPSLNGLPGETLHSYI
Sbjct: 353  KIKLKENGITPSIEKIAECLNMSQKKVRNATEASSKVFSLDREAFPSLNGLPGETLHSYI 412

Query: 433  ADTRIENNPWHGVDEWALKDEVDKLLSSTLREREQEIIRLYYGLENECLTWEDISRRIGL 254
            AD R+EN PWHGVDEW LKDEV+ L+SSTLRERE EIIRLYYGL+NECLTWEDISRRIGL
Sbjct: 413  ADNRLENIPWHGVDEWMLKDEVNNLISSTLRERESEIIRLYYGLDNECLTWEDISRRIGL 472

Query: 253  SRERVRQVGLVALEKLKHAARKRRLDAMLLK 161
            SRERVRQVGLVALEKLKHAAR+RRLDAML+K
Sbjct: 473  SRERVRQVGLVALEKLKHAARRRRLDAMLVK 503