BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Forsythia22_contig00007221
         (2604 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011081724.1| PREDICTED: RNA polymerase sigma factor sigC ...   684   0.0  
ref|XP_012857954.1| PREDICTED: RNA polymerase sigma factor sigC ...   632   e-178
gb|EYU20393.1| hypothetical protein MIMGU_mgv1a018845mg [Erythra...   584   e-163
emb|CDP08205.1| unnamed protein product [Coffea canephora]            581   e-162
ref|XP_009757459.1| PREDICTED: RNA polymerase sigma factor sigC ...   535   e-154
ref|XP_002275831.1| PREDICTED: RNA polymerase sigma factor sigC ...   550   e-153
emb|CAN83254.1| hypothetical protein VITISV_036980 [Vitis vinifera]   550   e-153
ref|XP_006355305.1| PREDICTED: RNA polymerase sigma factor sigC-...   537   e-149
ref|XP_009623296.1| PREDICTED: RNA polymerase sigma factor sigC ...   536   e-149
ref|XP_009757464.1| PREDICTED: RNA polymerase sigma factor sigC ...   535   e-149
ref|XP_009623297.1| PREDICTED: RNA polymerase sigma factor sigC ...   533   e-148
ref|XP_007012219.1| RNApolymerase sigma-subunit C, putative [The...   530   e-147
ref|XP_011081725.1| PREDICTED: RNA polymerase sigma factor sigC ...   529   e-147
ref|XP_004245130.1| PREDICTED: RNA polymerase sigma factor sigC ...   529   e-147
ref|XP_012077339.1| PREDICTED: RNA polymerase sigma factor sigC ...   525   e-145
gb|KDP34138.1| hypothetical protein JCGZ_07709 [Jatropha curcas]      523   e-145
ref|XP_007222923.1| hypothetical protein PRUPE_ppa003696mg [Prun...   521   e-144
gb|AKC88690.1| sigma factor [Melianthus villosus]                     518   e-143
ref|XP_008220144.1| PREDICTED: RNA polymerase sigma factor sigC-...   516   e-143
ref|XP_008365120.1| PREDICTED: RNA polymerase sigma factor sigC-...   510   e-141

>ref|XP_011081724.1| PREDICTED: RNA polymerase sigma factor sigC isoform X1 [Sesamum
            indicum]
          Length = 556

 Score =  684 bits (1765), Expect = 0.0
 Identities = 364/527 (69%), Positives = 429/527 (81%), Gaps = 1/527 (0%)
 Frame = -3

Query: 2317 CRGKGRESIYLTRLPIASAIYGETETLIDPLGPRTCSSSPQNLEDNYFGNKEIKMEPRKR 2138
            CRG+    I L RL  +S +YGETETL D      CSSSPQ LE+ Y G +E K+   K 
Sbjct: 31   CRGRDTSYI-LARLSASSVLYGETETLNDASRVHVCSSSPQLLENYYLGTRETKVAVGKG 89

Query: 2137 SCNGLYSLIDDNIQTSAENDKPAFLTSLQATEASQFSLLMKNLDKLEKMFSDSDVIRLER 1958
            S +GL SL++ +I+TS   DK A+LTSLQAT+ SQF LLMKNLD LE MFSDS+V+RLER
Sbjct: 90   SSDGLSSLLEKHIETSNSEDKLAYLTSLQATQLSQFRLLMKNLDMLEDMFSDSNVVRLER 149

Query: 1957 DILQQLKRLGALRLFHTCLSRSLKSSILFDLSDAPTQLVEETRINEPVDDHEGKVVVQSG 1778
            DIL+QL+RLGALRLF++CLSR+LKSS  FDLS+A T+LVEE ++N+ VD+H G+VV +SG
Sbjct: 150  DILEQLERLGALRLFYSCLSRTLKSSTSFDLSNATTELVEEPKVNDSVDNHVGEVV-RSG 208

Query: 1777 KKEQRRLRRKRALEKGNDSSILELPSETISGDXXXXXXXXXXXXXXKL-KIAKNEAEMSS 1601
            +KE R+LRRKR L+K +  +  ELP+ TIS                K  +IA+NEAEMSS
Sbjct: 209  RKELRKLRRKRMLDKESGITTQELPTVTISKQHKYASARRASRSRNKRQRIARNEAEMSS 268

Query: 1600 GVKLVADLEKIQTLLEKETGQVASLNIWAEAARVEKKVLQQHLQHGWQCREELLRSTRSL 1421
            GVKLVA+LEK++T+LE+ETGQVASL+ WAEAA ++KK LQQ+L +GW CR+ELLRSTRSL
Sbjct: 269  GVKLVAELEKVRTILEEETGQVASLSSWAEAAGIKKKELQQNLHYGWHCRDELLRSTRSL 328

Query: 1420 VVFIAKNYRGLGVAFEDLIQAGNFGVLQGAERFDQSRGYKFSTYVQYWIRKSMSIIVARH 1241
            V+FIA+NY GLGVAFEDLIQAGN GVLQGAERFDQSRGYKFSTYVQYWIRKSMS +VARH
Sbjct: 329  VLFIARNYWGLGVAFEDLIQAGNIGVLQGAERFDQSRGYKFSTYVQYWIRKSMSTLVARH 388

Query: 1240 ARGVRIPFMLSKAINQVQKARKALSSSHGKHPDDNEVAKFTGLSIAKITSASKCLRVVGS 1061
            ARGVRIP  LSK INQVQ+ARKALS+S+GK+PDD+++AK+TGLSIAKI SASKCLRVVGS
Sbjct: 389  ARGVRIPCTLSKVINQVQRARKALSTSNGKYPDDSDIAKYTGLSIAKIMSASKCLRVVGS 448

Query: 1060 IDQKMGEGISTKYLEVMPDASIMSPEETVTRQQMIQDVYRLLNALEPRERQVLILRFGLG 881
            IDQK+GE IS KY+E+ PD SI+SPEETV RQ MI DV+RLLN LEPRE+QVLILRFGLG
Sbjct: 449  IDQKIGEAISAKYMEIAPDTSILSPEETVIRQHMINDVHRLLNGLEPREKQVLILRFGLG 508

Query: 880  NHQRKSLEEIGRLFFVSKEWIRKIERTALTKLRNGDSHHNLSHYLYM 740
            N Q KSLEEIGRLF VSKEWIRKIER AL KLRN DS   LSHY+YM
Sbjct: 509  NRQCKSLEEIGRLFCVSKEWIRKIERAALAKLRNEDSLKILSHYVYM 555


>ref|XP_012857954.1| PREDICTED: RNA polymerase sigma factor sigC [Erythranthe guttatus]
          Length = 562

 Score =  632 bits (1629), Expect = e-178
 Identities = 344/533 (64%), Positives = 410/533 (76%), Gaps = 7/533 (1%)
 Frame = -3

Query: 2317 CRGKGRESIYLTRLPIASAIYGETETLIDPL-GPRTCSSSPQNLEDNYFGN-KEIKMEPR 2144
            CRG+   S +L R   AS IYG+TETL D   G     SS Q LE+ Y G  K++K+   
Sbjct: 31   CRGRD-SSYFLARSSAASVIYGDTETLNDTSRGIHVYPSSHQLLENYYLGGAKQLKVALG 89

Query: 2143 KRSCNGLYSLIDDNIQTSAENDKPAFLTSLQATEASQFSLLMKNLDKLEKMFSDSDVIRL 1964
            K S + LYSL+D +IQ     DK   LTS+QAT+AS+  LLMKNLD LE MF+DS+ +RL
Sbjct: 90   KGSSDSLYSLLDSDIQIPKNEDKLENLTSVQATQASKLRLLMKNLDVLEDMFADSNAVRL 149

Query: 1963 ERDILQQLKRLGALRLFHTCLSRSLKSSILFDLSDAPTQLVEE-TRINEPVDDHEGKVVV 1787
            E DIL+QL+RLGALRLFH+CLSR++KS   FDLSD PT++VEE  R+N+ VD+H GKV V
Sbjct: 150  EGDILEQLERLGALRLFHSCLSRTIKSYTSFDLSDGPTEIVEECARVNDSVDNHLGKVFV 209

Query: 1786 QSGKKEQRRLRRKRALEKGNDSSILELPSETISGDXXXXXXXXXXXXXXKL----KIAKN 1619
             SGKKE R+LRRKR  +     +I E PS+TIS D                    K A+N
Sbjct: 210  HSGKKELRKLRRKRTSDN-ESPTIQESPSKTISKDLQQLKFAIAGRTPRSRNKRQKTARN 268

Query: 1618 EAEMSSGVKLVADLEKIQTLLEKETGQVASLNIWAEAARVEKKVLQQHLQHGWQCREELL 1439
            EA+MSSGVK VA+LEKI+T LE+ETGQ+ASL+ WAEAA ++KK LQQHL +GW CR+ELL
Sbjct: 269  EADMSSGVKRVAELEKIRTKLEQETGQIASLSNWAEAAGIKKKELQQHLHYGWHCRDELL 328

Query: 1438 RSTRSLVVFIAKNYRGLGVAFEDLIQAGNFGVLQGAERFDQSRGYKFSTYVQYWIRKSMS 1259
            RST SLV+FIA+NY GLGVAFEDLIQAGN GVLQGAERFDQSRGYKFSTYVQYWIRKSMS
Sbjct: 329  RSTHSLVLFIARNYSGLGVAFEDLIQAGNIGVLQGAERFDQSRGYKFSTYVQYWIRKSMS 388

Query: 1258 IIVARHARGVRIPFMLSKAINQVQKARKALSSSHGKHPDDNEVAKFTGLSIAKITSASKC 1079
             +VA+HARGVRIP  LSK INQV KARKAL++S+GK+PDD E+AKFTGLS+AK+ SASKC
Sbjct: 389  TLVAKHARGVRIPCTLSKVINQVHKARKALTTSNGKYPDDYEIAKFTGLSVAKVMSASKC 448

Query: 1078 LRVVGSIDQKMGEGISTKYLEVMPDASIMSPEETVTRQQMIQDVYRLLNALEPRERQVLI 899
            LRVVGSIDQK+GE ++TKY+E++ D S+ SPEE V RQ M+ DV  LLN LEPRE+QV+I
Sbjct: 449  LRVVGSIDQKIGEYMTTKYMEILSDTSMPSPEEAVIRQHMLNDVSTLLNGLEPREKQVII 508

Query: 898  LRFGLGNHQRKSLEEIGRLFFVSKEWIRKIERTALTKLRNGDSHHNLSHYLYM 740
            LRFGLGN Q KSLEEIGRLF VSKEWIRKIER+AL KLRN DS   L+HY++M
Sbjct: 509  LRFGLGNCQCKSLEEIGRLFRVSKEWIRKIERSALIKLRNEDSLKILNHYVHM 561


>gb|EYU20393.1| hypothetical protein MIMGU_mgv1a018845mg [Erythranthe guttata]
          Length = 478

 Score =  584 bits (1505), Expect = e-163
 Identities = 314/481 (65%), Positives = 373/481 (77%), Gaps = 4/481 (0%)
 Frame = -3

Query: 2170 NKEIKMEPRKRSCNGLYSLIDDNIQTSAENDKPAFLTSLQATEASQFSLLMKNLDKLEKM 1991
            +K I++   K S + LYSL+D +IQ     DK   LTS+QAT+AS+  LLMKNLD LE M
Sbjct: 9    SKYIQVALGKGSSDSLYSLLDSDIQIPKNEDKLENLTSVQATQASKLRLLMKNLDVLEDM 68

Query: 1990 FSDSDVIRLERDILQQLKRLGALRLFHTCLSRSLKSSILFDLSDAPTQLVEETRINEPVD 1811
            F+DS+ +RLE DIL+QL+RLGALRLFH+CLSR++KS   FDLSD PT++VEE        
Sbjct: 69   FADSNAVRLEGDILEQLERLGALRLFHSCLSRTIKSYTSFDLSDGPTEIVEEC------- 121

Query: 1810 DHEGKVVVQSGKKEQRRLRRKRALEKGNDSSILELPSETISGDXXXXXXXXXXXXXXKL- 1634
                KV V SGKKE R+LRRKR  +     +I E PS+TIS D                 
Sbjct: 122  ----KVFVHSGKKELRKLRRKRTSDN-ESPTIQESPSKTISKDLQQLKFAIAGRTPRSRN 176

Query: 1633 ---KIAKNEAEMSSGVKLVADLEKIQTLLEKETGQVASLNIWAEAARVEKKVLQQHLQHG 1463
               K A+NEA+MSSGVK VA+LEKI+T LE+ETGQ+ASL+ WAEAA ++KK LQQHL +G
Sbjct: 177  KRQKTARNEADMSSGVKRVAELEKIRTKLEQETGQIASLSNWAEAAGIKKKELQQHLHYG 236

Query: 1462 WQCREELLRSTRSLVVFIAKNYRGLGVAFEDLIQAGNFGVLQGAERFDQSRGYKFSTYVQ 1283
            W CR+ELLRST SLV+FIA+NY GLGVAFEDLIQAGN GVLQGAERFDQSRGYKFSTYVQ
Sbjct: 237  WHCRDELLRSTHSLVLFIARNYSGLGVAFEDLIQAGNIGVLQGAERFDQSRGYKFSTYVQ 296

Query: 1282 YWIRKSMSIIVARHARGVRIPFMLSKAINQVQKARKALSSSHGKHPDDNEVAKFTGLSIA 1103
            YWIRKSMS +VA+HARGVRIP  LSK INQV KARKAL++S+GK+PDD E+AKFTGLS+A
Sbjct: 297  YWIRKSMSTLVAKHARGVRIPCTLSKVINQVHKARKALTTSNGKYPDDYEIAKFTGLSVA 356

Query: 1102 KITSASKCLRVVGSIDQKMGEGISTKYLEVMPDASIMSPEETVTRQQMIQDVYRLLNALE 923
            K+ SASKCLRVVGSIDQK+GE ++TKY+E++ D S+ SPEE V RQ M+ DV  LLN LE
Sbjct: 357  KVMSASKCLRVVGSIDQKIGEYMTTKYMEILSDTSMPSPEEAVIRQHMLNDVSTLLNGLE 416

Query: 922  PRERQVLILRFGLGNHQRKSLEEIGRLFFVSKEWIRKIERTALTKLRNGDSHHNLSHYLY 743
            PRE+QV+ILRFGLGN Q KSLEEIGRLF VSKEWIRKIER+AL KLRN DS   L+HY++
Sbjct: 417  PREKQVIILRFGLGNCQCKSLEEIGRLFRVSKEWIRKIERSALIKLRNEDSLKILNHYVH 476

Query: 742  M 740
            M
Sbjct: 477  M 477


>emb|CDP08205.1| unnamed protein product [Coffea canephora]
          Length = 599

 Score =  581 bits (1497), Expect = e-162
 Identities = 310/528 (58%), Positives = 394/528 (74%), Gaps = 5/528 (0%)
 Frame = -3

Query: 2308 KGRESIYLT-RLPIASAIYGETET-LIDPLGPRTCSSSPQNLEDNYFGNKEIKMEPRKRS 2135
            KG E++Y + ++   S  YG+T T L DP+  + CSS+ Q  E++    ++++    + S
Sbjct: 72   KGWEAVYESAKMSSFSVAYGDTTTWLSDPMRVKMCSSATQARENDNSETEDMEDAVSRWS 131

Query: 2134 CNGLYSLIDDNIQTSAENDKPAFLTSLQATEASQFSLLMKNLDKLEKMFSDSDVIRLERD 1955
             +G  ++  ++I +S EN+   +L SL+ T+A  F LLMKNLD LE+  +DS V+RLE D
Sbjct: 132  YHGSCNMAHNDISSSRENNNSIYLASLRNTKALHFGLLMKNLDVLEETIADSGVLRLEED 191

Query: 1954 ILQQLKRLGALRLFHTCLSRSLKSSILFDLSDAPTQLVEETRINEPVDDHEGKVVVQSGK 1775
            IL QL+RLGAL LF TCL R LK S L+DLSD  T+ VE ++IN PV+D  GK VV S K
Sbjct: 192  ILVQLERLGALELFQTCLCRMLKPSTLYDLSDKATKPVEASQINCPVEDVVGKKVVHSVK 251

Query: 1774 KEQRRLRRKRALEKGNDSSILELPSETISGDXXXXXXXXXXXXXXK---LKIAKNEAEMS 1604
            KE+R+ RRKR L+KGN   + E  S T+                 +   LKIA+ EAEMS
Sbjct: 252  KEKRKSRRKRPLDKGNGKFMQEKYSSTLEDAQQVEFSPGRKSSDSRSRSLKIARTEAEMS 311

Query: 1603 SGVKLVADLEKIQTLLEKETGQVASLNIWAEAARVEKKVLQQHLQHGWQCREELLRSTRS 1424
             GVKLV++LE+I+T++E+ TGQV  ++ WAEAA+V  +VLQQHLQ GW CR+ELLRSTRS
Sbjct: 312  QGVKLVSELERIRTIVEENTGQVVGMSNWAEAAQVNIQVLQQHLQFGWYCRDELLRSTRS 371

Query: 1423 LVVFIAKNYRGLGVAFEDLIQAGNFGVLQGAERFDQSRGYKFSTYVQYWIRKSMSIIVAR 1244
            LV++IA+NYRGLGVAFEDL+QAGN GVLQGA+RFD +RGYKFSTYVQYWIRKS+S++VA+
Sbjct: 372  LVLYIARNYRGLGVAFEDLVQAGNLGVLQGAQRFDHTRGYKFSTYVQYWIRKSISMVVAQ 431

Query: 1243 HARGVRIPFMLSKAINQVQKARKALSSSHGKHPDDNEVAKFTGLSIAKITSASKCLRVVG 1064
            HARG+RIP  LSKAI+Q+QKARKAL SSHGK+PD NE+AKFTGLS AKI S SKCLR+VG
Sbjct: 432  HARGIRIPSSLSKAISQIQKARKALKSSHGKYPDVNEIAKFTGLSTAKIMSVSKCLRIVG 491

Query: 1063 SIDQKMGEGISTKYLEVMPDASIMSPEETVTRQQMIQDVYRLLNALEPRERQVLILRFGL 884
            SIDQK+G+  S K LE++ D S+ SPEETV RQ M+Q +Y L+  LEPRERQVL+LRFGL
Sbjct: 492  SIDQKVGDSSSAKRLELISDTSMRSPEETVVRQHMLQGMYGLMKDLEPRERQVLVLRFGL 551

Query: 883  GNHQRKSLEEIGRLFFVSKEWIRKIERTALTKLRNGDSHHNLSHYLYM 740
             +HQRKSLEEIGRL+ VSKEW+RKIER ALTKLR  D   +LS Y+ M
Sbjct: 552  RSHQRKSLEEIGRLYSVSKEWVRKIERRALTKLRKNDVFQDLSQYMNM 599


>ref|XP_009757459.1| PREDICTED: RNA polymerase sigma factor sigC isoform X1 [Nicotiana
            sylvestris]
          Length = 584

 Score =  535 bits (1379), Expect(2) = e-154
 Identities = 295/526 (56%), Positives = 374/526 (71%), Gaps = 6/526 (1%)
 Frame = -3

Query: 2308 KGRESIYLTRLPIASAIYGETE-TLIDPLGPRTCSSSPQNLEDNYFGNKEIKMEPRKRSC 2132
            KG+E++Y     +   I G+ E +  DP   RTC S PQ    +     EIK    + S 
Sbjct: 61   KGKEALYDPARSLKPFINGDCEPSHSDPFRVRTCLSDPQLWTSDISVTTEIKTRIGRGSP 120

Query: 2131 NGLYSLI-DDNIQTSAENDKPAFLTSLQATEASQFSLLMKNLDKLEKMFSDSDVIRLERD 1955
            + +Y  I  D    S + +KP++L++   T A  FSLLMKN+D LE MF+DS++ RLE D
Sbjct: 121  SNIYGDIGSDKTGISPDGEKPSYLST---TRAPHFSLLMKNIDLLENMFADSEMSRLEND 177

Query: 1954 ILQQLKRLGALRLFHTCLSRSLKSSILFDLSDAPTQLVEETRINEPVDDHEGKVVVQSGK 1775
            IL QL++LGAL  FH+ LSR+L S+   ++ D P +LVEE   ++ V +   KVVV+S K
Sbjct: 178  ILVQLEKLGALEFFHSRLSRTLHSTSP-EVLDVPRELVEEIEKDDLVGNGIDKVVVRSRK 236

Query: 1774 KEQRRLRRKRALEKGNDSSILELPSETISGDXXXXXXXXXXXXXXKL----KIAKNEAEM 1607
            K++R  RR RA    ND   +   ++ I  D                    KIAKNEAEM
Sbjct: 237  KQERNSRRNRASGIANDIITVHPHTKNIQEDMQQPKFYSGKRTHASRNKRQKIAKNEAEM 296

Query: 1606 SSGVKLVADLEKIQTLLEKETGQVASLNIWAEAARVEKKVLQQHLQHGWQCREELLRSTR 1427
            S GVKLVA+LE+I+++LE+ETG+VAS + WAEAA VE+K LQ HL  GW CR+ELL+STR
Sbjct: 297  SRGVKLVAELERIRSILEEETGRVASFSSWAEAAGVEQKELQHHLHFGWYCRDELLKSTR 356

Query: 1426 SLVVFIAKNYRGLGVAFEDLIQAGNFGVLQGAERFDQSRGYKFSTYVQYWIRKSMSIIVA 1247
            SLV+++A+NYRGLGVAFEDLIQAGN GVLQGA RFD +RGYKFSTYVQYWIRKS+S +VA
Sbjct: 357  SLVLYLARNYRGLGVAFEDLIQAGNMGVLQGAVRFDDTRGYKFSTYVQYWIRKSLSKLVA 416

Query: 1246 RHARGVRIPFMLSKAINQVQKARKALSSSHGKHPDDNEVAKFTGLSIAKITSASKCLRVV 1067
            +HARG+RIPF + KAINQ+ KARKALS SHGK P DNE+AK+TGLS A+I  ASKCLRVV
Sbjct: 417  QHARGIRIPFTICKAINQIHKARKALSRSHGKFPGDNEIAKYTGLSTARIAMASKCLRVV 476

Query: 1066 GSIDQKMGEGISTKYLEVMPDASIMSPEETVTRQQMIQDVYRLLNALEPRERQVLILRFG 887
            GSIDQK+G  IS K LE+ PD SI+SPEETV R+ +I ++Y LL +L+P+E+QV+  RFG
Sbjct: 477  GSIDQKVGHCISAKVLELTPDKSIVSPEETVIREDIIDNMYALLESLDPKEQQVIYFRFG 536

Query: 886  LGNHQRKSLEEIGRLFFVSKEWIRKIERTALTKLRNGDSHHNLSHY 749
            L NHQRKSLEEIGRL+ VSKEWIR+IER ALTKLR+ D   +L+HY
Sbjct: 537  LENHQRKSLEEIGRLYGVSKEWIRRIERRALTKLRSADCFQDLTHY 582



 Score = 41.6 bits (96), Expect(2) = e-154
 Identities = 26/46 (56%), Positives = 28/46 (60%)
 Frame = -1

Query: 2454 NLPLFSSIGETVFWRWVLGWISNAGVSQSSPFFPQVHHHLGPLHIL 2317
            N   FS I +T FW WVLG  SN GVS S+P  P  H H G LHIL
Sbjct: 5    NSKSFSCIHKT-FWLWVLGCTSN-GVSLSNPLSPPTHQH-GLLHIL 47


>ref|XP_002275831.1| PREDICTED: RNA polymerase sigma factor sigC [Vitis vinifera]
            gi|296081598|emb|CBI20603.3| unnamed protein product
            [Vitis vinifera]
          Length = 561

 Score =  550 bits (1417), Expect = e-153
 Identities = 298/528 (56%), Positives = 379/528 (71%), Gaps = 7/528 (1%)
 Frame = -3

Query: 2308 KGRESIY-LTRLPIASAIYGETETLI-DPLGPRTCSSSP-QNLEDNYFGNKEIKMEPRKR 2138
            +G+E+ +  TR    S    + E+L  DP  P  CSS   Q  E++Y   + +KM+  K 
Sbjct: 33   QGKEASFDSTRFSFPSVTSEDCESLYKDPFKPFACSSGALQTFENDYSAMEAMKMKIGKC 92

Query: 2137 SCNGLYSLIDDNIQTSAENDKPAFLTSLQATEASQFSLLMKNLDKLEKMFSDSDVIRLER 1958
            S   L+ +++ + Q     D  A +  LQA++ASQFSLL++NLD LE+MF+DS+++RLER
Sbjct: 93   SHGDLFKIVNAS-QAPIGEDISASVAGLQASKASQFSLLLENLDILEEMFADSNMVRLER 151

Query: 1957 DILQQLKRLGALRLFHTCLSRSLKSSILFDLSDAPTQLVEETRINEPVDDHEGKVVVQSG 1778
            DI+ QL RLGAL+LF  CLSR+LK+S  FDL  APT+ + E + N  VDDH  KVVV+SG
Sbjct: 152  DIMVQLGRLGALKLFQICLSRTLKTSTSFDLFSAPTEHIRECQTNGTVDDHLDKVVVRSG 211

Query: 1777 KKEQRRLRRKRALEKGNDSSILELPSETI----SGDXXXXXXXXXXXXXXKLKIAKNEAE 1610
            KKE+R+ +R+RALEK ++     LPS+TI                     +L  AKNEAE
Sbjct: 212  KKEERKSKRERALEKADNIYAFPLPSKTIRKGPGRPSVSTVKRTLNSRRKRLMNAKNEAE 271

Query: 1609 MSSGVKLVADLEKIQTLLEKETGQVASLNIWAEAARVEKKVLQQHLQHGWQCREELLRST 1430
            MS GVKLVA+LE+I+  LE+E G VASL+ WAEAA V+KKVLQQ LQ GW CR+ELLRST
Sbjct: 272  MSKGVKLVANLERIRATLEEEIGHVASLSNWAEAAGVDKKVLQQQLQFGWYCRDELLRST 331

Query: 1429 RSLVVFIAKNYRGLGVAFEDLIQAGNFGVLQGAERFDQSRGYKFSTYVQYWIRKSMSIIV 1250
             SLV++IA+NYRG+GVAFED++QAGN GVLQGAERFD ++GY+FSTYVQYWIRKSMS +V
Sbjct: 332  HSLVLYIARNYRGMGVAFEDILQAGNLGVLQGAERFDHTKGYRFSTYVQYWIRKSMSTLV 391

Query: 1249 ARHARGVRIPFMLSKAINQVQKARKALSSSHGKHPDDNEVAKFTGLSIAKITSASKCLRV 1070
            ARHARGV+IPF L++AI Q+QKARKAL  SHG++PDDNE+AKFTGLS+AKI SA  CLRV
Sbjct: 392  ARHARGVKIPFTLNRAIGQIQKARKALYKSHGRYPDDNEIAKFTGLSLAKIRSAGNCLRV 451

Query: 1069 VGSIDQKMGEGISTKYLEVMPDASIMSPEETVTRQQMIQDVYRLLNALEPRERQVLILRF 890
            VGS DQ   +      LE  PD SI SPEE   +Q   +D++ LL  L+PRERQ+L+LR+
Sbjct: 452  VGSTDQSFQDCWGATILEFTPDTSIKSPEEGFMQQCKRKDIHNLLKGLDPRERQILVLRY 511

Query: 889  GLGNHQRKSLEEIGRLFFVSKEWIRKIERTALTKLRNGDSHHNLSHYL 746
            G G  QRKSLEEIGR F VSKEWIRK+E+TAL  LR+ +   NL HY+
Sbjct: 512  GFGEQQRKSLEEIGRRFNVSKEWIRKLEKTALANLRDEEICQNLRHYV 559


>emb|CAN83254.1| hypothetical protein VITISV_036980 [Vitis vinifera]
          Length = 611

 Score =  550 bits (1417), Expect = e-153
 Identities = 298/528 (56%), Positives = 379/528 (71%), Gaps = 7/528 (1%)
 Frame = -3

Query: 2308 KGRESIY-LTRLPIASAIYGETETLI-DPLGPRTCSSSP-QNLEDNYFGNKEIKMEPRKR 2138
            +G+E+ +  TR    S    + E+L  DP  P  CSS   Q  E++Y   + +KM+  K 
Sbjct: 83   QGKEASFDSTRFSFPSVTSEDCESLYKDPFKPFACSSGALQTFENDYSAMEAMKMKIGKC 142

Query: 2137 SCNGLYSLIDDNIQTSAENDKPAFLTSLQATEASQFSLLMKNLDKLEKMFSDSDVIRLER 1958
            S   L+ +++ + Q     D  A +  LQA++ASQFSLL++NLD LE+MF+DS+++RLER
Sbjct: 143  SHGDLFKIVNAS-QAPIGEDISASVAGLQASKASQFSLLLENLDILEEMFADSNMVRLER 201

Query: 1957 DILQQLKRLGALRLFHTCLSRSLKSSILFDLSDAPTQLVEETRINEPVDDHEGKVVVQSG 1778
            DI+ QL RLGAL+LF  CLSR+LK+S  FDL  APT+ + E + N  VDDH  KVVV+SG
Sbjct: 202  DIMVQLGRLGALKLFQICLSRTLKTSTSFDLFSAPTEHIRECQTNGTVDDHLDKVVVRSG 261

Query: 1777 KKEQRRLRRKRALEKGNDSSILELPSETI----SGDXXXXXXXXXXXXXXKLKIAKNEAE 1610
            KKE+R+ +R+RALEK ++     LPS+TI                     +L  AKNEAE
Sbjct: 262  KKEERKSKRERALEKADNIYAFPLPSKTIRKGPGRPSVSTVKRTLNSRRKRLMNAKNEAE 321

Query: 1609 MSSGVKLVADLEKIQTLLEKETGQVASLNIWAEAARVEKKVLQQHLQHGWQCREELLRST 1430
            MS GVKLVA+LE+I+  LE+E G VASL+ WAEAA V+KKVLQQ LQ GW CR+ELLRST
Sbjct: 322  MSKGVKLVANLERIRATLEEEIGHVASLSNWAEAAGVDKKVLQQQLQFGWYCRDELLRST 381

Query: 1429 RSLVVFIAKNYRGLGVAFEDLIQAGNFGVLQGAERFDQSRGYKFSTYVQYWIRKSMSIIV 1250
             SLV++IA+NYRG+GVAFED++QAGN GVLQGAERFD ++GY+FSTYVQYWIRKSMS +V
Sbjct: 382  HSLVLYIARNYRGMGVAFEDILQAGNLGVLQGAERFDHTKGYRFSTYVQYWIRKSMSTLV 441

Query: 1249 ARHARGVRIPFMLSKAINQVQKARKALSSSHGKHPDDNEVAKFTGLSIAKITSASKCLRV 1070
            ARHARGV+IPF L++AI Q+QKARKAL  SHG++PDDNE+AKFTGLS+AKI SA  CLRV
Sbjct: 442  ARHARGVKIPFTLNRAIGQIQKARKALYKSHGRYPDDNEIAKFTGLSLAKIRSAGNCLRV 501

Query: 1069 VGSIDQKMGEGISTKYLEVMPDASIMSPEETVTRQQMIQDVYRLLNALEPRERQVLILRF 890
            VGS DQ   +      LE  PD SI SPEE   +Q   +D++ LL  L+PRERQ+L+LR+
Sbjct: 502  VGSTDQSFQDCWGATILEFTPDTSIKSPEEGFMQQCKRKDIHNLLKGLDPRERQILVLRY 561

Query: 889  GLGNHQRKSLEEIGRLFFVSKEWIRKIERTALTKLRNGDSHHNLSHYL 746
            G G  QRKSLEEIGR F VSKEWIRK+E+TAL  LR+ +   NL HY+
Sbjct: 562  GFGEQQRKSLEEIGRRFNVSKEWIRKLEKTALANLRDEEICQNLRHYV 609


>ref|XP_006355305.1| PREDICTED: RNA polymerase sigma factor sigC-like [Solanum tuberosum]
          Length = 555

 Score =  537 bits (1383), Expect = e-149
 Identities = 292/526 (55%), Positives = 372/526 (70%), Gaps = 6/526 (1%)
 Frame = -3

Query: 2308 KGRESIYLTRLPIASAIYGETE-TLIDPLGPRTCSSSPQNLEDNYFGNKEIKMEPRKRSC 2132
            KGRE++Y     +   I G+ E +  DP   +TC S PQ    +     EIK    + S 
Sbjct: 31   KGREALYDPARSLKPFITGDCEPSHSDPFRVQTCLSDPQLWTSDTSVTTEIKTRNGRGSP 90

Query: 2131 NGLYSLIDDN-IQTSAENDKPAFLTSLQATEASQFSLLMKNLDKLEKMFSDSDVIRLERD 1955
            + +Y  I  + I  S + +KP +L +   T++  FSLLMKNLD LE MF+DS++ RLERD
Sbjct: 91   SNVYGDIGSHKIGISPDGEKPTYLNT---TKSLHFSLLMKNLDLLENMFADSEMSRLERD 147

Query: 1954 ILQQLKRLGALRLFHTCLSRSLKSSILFDLSDAPTQLVEETRINEPVDDHEGKVVVQSGK 1775
            IL QL++LGAL  FHTCLSR+  SS    + D P +L++E   ++ V +   KVVV+S K
Sbjct: 148  ILVQLEKLGALEFFHTCLSRTHHSSTFPKVLDVPRELIKEVEKDDLVGNAIDKVVVRSRK 207

Query: 1774 KEQRRLRRKRALEKGNDSSILELPSETISGDXXXXXXXXXXXXXXKL----KIAKNEAEM 1607
            K++R+ RR RA    ND   ++  ++ I  D                    KIAKNEAEM
Sbjct: 208  KQERKSRRNRASRNANDIITVQPHTKNIQEDLQQPKFYSGKRTQASRNKRQKIAKNEAEM 267

Query: 1606 SSGVKLVADLEKIQTLLEKETGQVASLNIWAEAARVEKKVLQQHLQHGWQCREELLRSTR 1427
            S GVKLVA LE+I+++LE+ETG+VA+ + WAEAA +E+K LQQ L  GW CR+ELL+STR
Sbjct: 268  SRGVKLVAQLERIRSILEEETGRVATFSSWAEAAGIEQKELQQRLHFGWYCRDELLKSTR 327

Query: 1426 SLVVFIAKNYRGLGVAFEDLIQAGNFGVLQGAERFDQSRGYKFSTYVQYWIRKSMSIIVA 1247
            SLV+++A+NYRGLGVAFEDLIQAGN GVLQGA RFD +RGYKFSTYVQYWIRKS+S +VA
Sbjct: 328  SLVLYLARNYRGLGVAFEDLIQAGNMGVLQGAVRFDHTRGYKFSTYVQYWIRKSLSKLVA 387

Query: 1246 RHARGVRIPFMLSKAINQVQKARKALSSSHGKHPDDNEVAKFTGLSIAKITSASKCLRVV 1067
            +HARGVRIPF + K INQ+ KARK LS SHGK P D+E+AKFTGLS A+I  ASKCLRVV
Sbjct: 388  QHARGVRIPFTICKVINQIHKARKTLSRSHGKFPADDEIAKFTGLSTARIAMASKCLRVV 447

Query: 1066 GSIDQKMGEGISTKYLEVMPDASIMSPEETVTRQQMIQDVYRLLNALEPRERQVLILRFG 887
            GSIDQK+G+ IS K LE+ PD SI SPEETV RQ ++ ++Y LL +L+P+E+QV+  RFG
Sbjct: 448  GSIDQKVGDCISAKVLELTPDKSITSPEETVMRQDIVDNMYSLLESLDPKEQQVIYFRFG 507

Query: 886  LGNHQRKSLEEIGRLFFVSKEWIRKIERTALTKLRNGDSHHNLSHY 749
            L  HQRKSLEEIGRL+ VSKEWIR+IER ALTKLRN D   +++HY
Sbjct: 508  LETHQRKSLEEIGRLYGVSKEWIRRIERRALTKLRNADYFQHITHY 553


>ref|XP_009623296.1| PREDICTED: RNA polymerase sigma factor sigC isoform X1 [Nicotiana
            tomentosiformis]
          Length = 572

 Score =  536 bits (1380), Expect = e-149
 Identities = 302/571 (52%), Positives = 382/571 (66%), Gaps = 6/571 (1%)
 Frame = -3

Query: 2443 LFFHWRNSLLEMGFRLDFKCGXXXXXXXXXXXXXXXXXXXXSCRGKGRESIYLTRLPIAS 2264
            +F     +LL MGFRL  K G                        KG+E++Y     +  
Sbjct: 7    VFLLHSQNLLAMGFRLYLKWGFSVQPPFSSNSSSWPSSHSF----KGKEALYDPARSLKP 62

Query: 2263 AIYGETE-TLIDPLGPRTCSSSPQNLEDNYFGNKEIKMEPRKRSCNGLYSLIDDNIQT-S 2090
             I  + E +  DP   RTC S PQ    +     EIK    + S   +Y  I       S
Sbjct: 63   FINEDCEPSHSDPFRVRTCLSDPQLWTSDTSVTTEIKTRIGRGSPTNIYGDIGSPKNVIS 122

Query: 2089 AENDKPAFLTSLQATEASQFSLLMKNLDKLEKMFSDSDVIRLERDILQQLKRLGALRLFH 1910
             + +KP +L +   T A  FSLLMKNLD LE MF+DS+V RLERDI+ QL +LGAL  FH
Sbjct: 123  LDGEKPTYLNT---TRALHFSLLMKNLDLLENMFADSEVSRLERDIMVQLDKLGALEFFH 179

Query: 1909 TCLSRSLKSSILFDLSDAPTQLVEETRINEPVDDHEGKVVVQSGKKEQRRLRRKRALEKG 1730
            TCLSR+   S   ++ D P +L+EE   +  V +   KVVV+S KK++R+ RR RA    
Sbjct: 180  TCLSRTNHCSTFPEVLDVPRELIEEIEKDGLVGNGIDKVVVRSKKKQERKSRRNRASRNA 239

Query: 1729 NDSSILELPSETISGDXXXXXXXXXXXXXXKL----KIAKNEAEMSSGVKLVADLEKIQT 1562
            ND   ++  ++ I  D                    KIAKNEAEMS GVKLVA+LE+I++
Sbjct: 240  NDIITVQPHTKNIQEDLQQPKFFSGKRTHTSRNKRQKIAKNEAEMSRGVKLVAELERIRS 299

Query: 1561 LLEKETGQVASLNIWAEAARVEKKVLQQHLQHGWQCREELLRSTRSLVVFIAKNYRGLGV 1382
            +LE+ETG+VAS + WAEAA VE+K LQQ L  GW CR+ELL+STRSLV+++A+NYRGLGV
Sbjct: 300  ILEEETGRVASFSSWAEAAGVEQKELQQRLHFGWYCRDELLKSTRSLVLYLARNYRGLGV 359

Query: 1381 AFEDLIQAGNFGVLQGAERFDQSRGYKFSTYVQYWIRKSMSIIVARHARGVRIPFMLSKA 1202
            AFEDLIQAGN GVLQGA RFD +RGYKFSTYVQYWIRKS+S +VA+HARG+RIPF + KA
Sbjct: 360  AFEDLIQAGNMGVLQGAVRFDDTRGYKFSTYVQYWIRKSLSKLVAQHARGIRIPFTICKA 419

Query: 1201 INQVQKARKALSSSHGKHPDDNEVAKFTGLSIAKITSASKCLRVVGSIDQKMGEGISTKY 1022
            INQ+ KARKALS SHGK P D+E+AK+TGLS A+I  ASKCLRVVGSIDQK+G+ IS K 
Sbjct: 420  INQIHKARKALSRSHGKFPGDDEIAKYTGLSTARIAMASKCLRVVGSIDQKVGDCISAKV 479

Query: 1021 LEVMPDASIMSPEETVTRQQMIQDVYRLLNALEPRERQVLILRFGLGNHQRKSLEEIGRL 842
            +E+ PD SI+SPEETV R+ +I ++Y LL +L+P+E+QV+  RFGL NHQRKSLEEIGRL
Sbjct: 480  MELTPDKSIISPEETVIREDIIDNMYALLESLDPKEQQVVYFRFGLENHQRKSLEEIGRL 539

Query: 841  FFVSKEWIRKIERTALTKLRNGDSHHNLSHY 749
            + VSKEWIR+IER AL+KLR+ D   +L+HY
Sbjct: 540  YGVSKEWIRRIERRALSKLRSADCFQDLTHY 570


>ref|XP_009757464.1| PREDICTED: RNA polymerase sigma factor sigC isoform X2 [Nicotiana
            sylvestris]
          Length = 554

 Score =  535 bits (1379), Expect = e-149
 Identities = 295/526 (56%), Positives = 374/526 (71%), Gaps = 6/526 (1%)
 Frame = -3

Query: 2308 KGRESIYLTRLPIASAIYGETE-TLIDPLGPRTCSSSPQNLEDNYFGNKEIKMEPRKRSC 2132
            KG+E++Y     +   I G+ E +  DP   RTC S PQ    +     EIK    + S 
Sbjct: 31   KGKEALYDPARSLKPFINGDCEPSHSDPFRVRTCLSDPQLWTSDISVTTEIKTRIGRGSP 90

Query: 2131 NGLYSLI-DDNIQTSAENDKPAFLTSLQATEASQFSLLMKNLDKLEKMFSDSDVIRLERD 1955
            + +Y  I  D    S + +KP++L++   T A  FSLLMKN+D LE MF+DS++ RLE D
Sbjct: 91   SNIYGDIGSDKTGISPDGEKPSYLST---TRAPHFSLLMKNIDLLENMFADSEMSRLEND 147

Query: 1954 ILQQLKRLGALRLFHTCLSRSLKSSILFDLSDAPTQLVEETRINEPVDDHEGKVVVQSGK 1775
            IL QL++LGAL  FH+ LSR+L S+   ++ D P +LVEE   ++ V +   KVVV+S K
Sbjct: 148  ILVQLEKLGALEFFHSRLSRTLHSTSP-EVLDVPRELVEEIEKDDLVGNGIDKVVVRSRK 206

Query: 1774 KEQRRLRRKRALEKGNDSSILELPSETISGDXXXXXXXXXXXXXXKL----KIAKNEAEM 1607
            K++R  RR RA    ND   +   ++ I  D                    KIAKNEAEM
Sbjct: 207  KQERNSRRNRASGIANDIITVHPHTKNIQEDMQQPKFYSGKRTHASRNKRQKIAKNEAEM 266

Query: 1606 SSGVKLVADLEKIQTLLEKETGQVASLNIWAEAARVEKKVLQQHLQHGWQCREELLRSTR 1427
            S GVKLVA+LE+I+++LE+ETG+VAS + WAEAA VE+K LQ HL  GW CR+ELL+STR
Sbjct: 267  SRGVKLVAELERIRSILEEETGRVASFSSWAEAAGVEQKELQHHLHFGWYCRDELLKSTR 326

Query: 1426 SLVVFIAKNYRGLGVAFEDLIQAGNFGVLQGAERFDQSRGYKFSTYVQYWIRKSMSIIVA 1247
            SLV+++A+NYRGLGVAFEDLIQAGN GVLQGA RFD +RGYKFSTYVQYWIRKS+S +VA
Sbjct: 327  SLVLYLARNYRGLGVAFEDLIQAGNMGVLQGAVRFDDTRGYKFSTYVQYWIRKSLSKLVA 386

Query: 1246 RHARGVRIPFMLSKAINQVQKARKALSSSHGKHPDDNEVAKFTGLSIAKITSASKCLRVV 1067
            +HARG+RIPF + KAINQ+ KARKALS SHGK P DNE+AK+TGLS A+I  ASKCLRVV
Sbjct: 387  QHARGIRIPFTICKAINQIHKARKALSRSHGKFPGDNEIAKYTGLSTARIAMASKCLRVV 446

Query: 1066 GSIDQKMGEGISTKYLEVMPDASIMSPEETVTRQQMIQDVYRLLNALEPRERQVLILRFG 887
            GSIDQK+G  IS K LE+ PD SI+SPEETV R+ +I ++Y LL +L+P+E+QV+  RFG
Sbjct: 447  GSIDQKVGHCISAKVLELTPDKSIVSPEETVIREDIIDNMYALLESLDPKEQQVIYFRFG 506

Query: 886  LGNHQRKSLEEIGRLFFVSKEWIRKIERTALTKLRNGDSHHNLSHY 749
            L NHQRKSLEEIGRL+ VSKEWIR+IER ALTKLR+ D   +L+HY
Sbjct: 507  LENHQRKSLEEIGRLYGVSKEWIRRIERRALTKLRSADCFQDLTHY 552


>ref|XP_009623297.1| PREDICTED: RNA polymerase sigma factor sigC isoform X2 [Nicotiana
            tomentosiformis]
          Length = 560

 Score =  533 bits (1374), Expect = e-148
 Identities = 292/526 (55%), Positives = 370/526 (70%), Gaps = 6/526 (1%)
 Frame = -3

Query: 2308 KGRESIYLTRLPIASAIYGETE-TLIDPLGPRTCSSSPQNLEDNYFGNKEIKMEPRKRSC 2132
            KG+E++Y     +   I  + E +  DP   RTC S PQ    +     EIK    + S 
Sbjct: 36   KGKEALYDPARSLKPFINEDCEPSHSDPFRVRTCLSDPQLWTSDTSVTTEIKTRIGRGSP 95

Query: 2131 NGLYSLIDDNIQT-SAENDKPAFLTSLQATEASQFSLLMKNLDKLEKMFSDSDVIRLERD 1955
              +Y  I       S + +KP +L +   T A  FSLLMKNLD LE MF+DS+V RLERD
Sbjct: 96   TNIYGDIGSPKNVISLDGEKPTYLNT---TRALHFSLLMKNLDLLENMFADSEVSRLERD 152

Query: 1954 ILQQLKRLGALRLFHTCLSRSLKSSILFDLSDAPTQLVEETRINEPVDDHEGKVVVQSGK 1775
            I+ QL +LGAL  FHTCLSR+   S   ++ D P +L+EE   +  V +   KVVV+S K
Sbjct: 153  IMVQLDKLGALEFFHTCLSRTNHCSTFPEVLDVPRELIEEIEKDGLVGNGIDKVVVRSKK 212

Query: 1774 KEQRRLRRKRALEKGNDSSILELPSETISGDXXXXXXXXXXXXXXKL----KIAKNEAEM 1607
            K++R+ RR RA    ND   ++  ++ I  D                    KIAKNEAEM
Sbjct: 213  KQERKSRRNRASRNANDIITVQPHTKNIQEDLQQPKFFSGKRTHTSRNKRQKIAKNEAEM 272

Query: 1606 SSGVKLVADLEKIQTLLEKETGQVASLNIWAEAARVEKKVLQQHLQHGWQCREELLRSTR 1427
            S GVKLVA+LE+I+++LE+ETG+VAS + WAEAA VE+K LQQ L  GW CR+ELL+STR
Sbjct: 273  SRGVKLVAELERIRSILEEETGRVASFSSWAEAAGVEQKELQQRLHFGWYCRDELLKSTR 332

Query: 1426 SLVVFIAKNYRGLGVAFEDLIQAGNFGVLQGAERFDQSRGYKFSTYVQYWIRKSMSIIVA 1247
            SLV+++A+NYRGLGVAFEDLIQAGN GVLQGA RFD +RGYKFSTYVQYWIRKS+S +VA
Sbjct: 333  SLVLYLARNYRGLGVAFEDLIQAGNMGVLQGAVRFDDTRGYKFSTYVQYWIRKSLSKLVA 392

Query: 1246 RHARGVRIPFMLSKAINQVQKARKALSSSHGKHPDDNEVAKFTGLSIAKITSASKCLRVV 1067
            +HARG+RIPF + KAINQ+ KARKALS SHGK P D+E+AK+TGLS A+I  ASKCLRVV
Sbjct: 393  QHARGIRIPFTICKAINQIHKARKALSRSHGKFPGDDEIAKYTGLSTARIAMASKCLRVV 452

Query: 1066 GSIDQKMGEGISTKYLEVMPDASIMSPEETVTRQQMIQDVYRLLNALEPRERQVLILRFG 887
            GSIDQK+G+ IS K +E+ PD SI+SPEETV R+ +I ++Y LL +L+P+E+QV+  RFG
Sbjct: 453  GSIDQKVGDCISAKVMELTPDKSIISPEETVIREDIIDNMYALLESLDPKEQQVVYFRFG 512

Query: 886  LGNHQRKSLEEIGRLFFVSKEWIRKIERTALTKLRNGDSHHNLSHY 749
            L NHQRKSLEEIGRL+ VSKEWIR+IER AL+KLR+ D   +L+HY
Sbjct: 513  LENHQRKSLEEIGRLYGVSKEWIRRIERRALSKLRSADCFQDLTHY 558


>ref|XP_007012219.1| RNApolymerase sigma-subunit C, putative [Theobroma cacao]
            gi|508782582|gb|EOY29838.1| RNApolymerase sigma-subunit
            C, putative [Theobroma cacao]
          Length = 848

 Score =  530 bits (1366), Expect = e-147
 Identities = 290/518 (55%), Positives = 376/518 (72%), Gaps = 5/518 (0%)
 Frame = -3

Query: 2284 TRLPIASAIYGETETLIDPLGPRTCSSSPQNLEDNYFGNKEIKMEPRKRSCNGLYSL-ID 2108
            +RLP +  +     +L DPL     S++PQ LE      +E+K+   K S    +SL + 
Sbjct: 335  SRLPSSGVL-----SLKDPLKAYASSAAPQTLEKGCLEIEEMKVNIGKGSQAHSHSLTMI 389

Query: 2107 DNIQTSAENDKPAFLTSLQATEASQFSLLMKNLDKLEKMFSDSDVIRLERDILQQLKRLG 1928
            D        DK +  TS QA +AS +SLLM+NLD LE+ F+DSDV+ LER+IL QL R G
Sbjct: 390  DKTHELIGGDKSSSRTSPQACKASHYSLLMENLDVLEETFADSDVLTLEREILLQLGRFG 449

Query: 1927 ALRLFHTCLSRSLKSSILFDLSDAPTQLVEETRINEPVDDHEGKVVVQSGKKEQRRLRRK 1748
            AL+LF+TCLSR+LK+S + DLSD P     +  +N  VD  +  +VV S KK+QR+  R+
Sbjct: 450  ALKLFNTCLSRTLKASNILDLSDVPANS-GDCNMNLSVDGQKDNIVVCSRKKKQRKKIRE 508

Query: 1747 RALEKGNDSSILELPSETISG----DXXXXXXXXXXXXXXKLKIAKNEAEMSSGVKLVAD 1580
            RALE     S   +PS T+ G                   +L+IA+NEAEMS GVK+VA+
Sbjct: 509  RALENPTIISTQLMPSNTLHGRFQKPKVSSAKRVSDSRSRRLRIARNEAEMSKGVKVVAN 568

Query: 1579 LEKIQTLLEKETGQVASLNIWAEAARVEKKVLQQHLQHGWQCREELLRSTRSLVVFIAKN 1400
            LE+I+T LE+ETG+ ASL+ WAEAA V +KVLQQHL+ GW CR+ELLRSTRSLV++ A+N
Sbjct: 569  LERIRTTLEEETGRAASLSCWAEAAGVSEKVLQQHLRFGWYCRDELLRSTRSLVLYFARN 628

Query: 1399 YRGLGVAFEDLIQAGNFGVLQGAERFDQSRGYKFSTYVQYWIRKSMSIIVARHARGVRIP 1220
            YRGLG+A EDLIQAG+ GVLQGAERFD +RGY+FSTYVQ+WIRKS+S IVARHARG+++P
Sbjct: 629  YRGLGIAHEDLIQAGSLGVLQGAERFDHTRGYRFSTYVQFWIRKSVSRIVARHARGIQVP 688

Query: 1219 FMLSKAINQVQKARKALSSSHGKHPDDNEVAKFTGLSIAKITSASKCLRVVGSIDQKMGE 1040
              LS+AI Q+QKARKALS SHGK+PD++ +AKFTGLS+AKI SA+KC+RVVGSIDQK+G+
Sbjct: 689  CTLSRAIVQIQKARKALSKSHGKYPDEDAIAKFTGLSLAKIRSANKCMRVVGSIDQKIGD 748

Query: 1039 GISTKYLEVMPDASIMSPEETVTRQQMIQDVYRLLNALEPRERQVLILRFGLGNHQRKSL 860
             ++ KYLE +PD S+ SPE+TV RQ M +D++ LLN L+ RERQV++LR+GL     KSL
Sbjct: 749  CMNAKYLEFIPDLSVRSPEKTVMRQHMKEDIHDLLNGLDARERQVMVLRYGLKGSPPKSL 808

Query: 859  EEIGRLFFVSKEWIRKIERTALTKLRNGDSHHNLSHYL 746
            EEIGRLF VSKEWIR+IE  A+ KLR+ ++  NLSHYL
Sbjct: 809  EEIGRLFHVSKEWIRRIEMKAMKKLRDKETCRNLSHYL 846


>ref|XP_011081725.1| PREDICTED: RNA polymerase sigma factor sigC isoform X2 [Sesamum
            indicum]
          Length = 388

 Score =  529 bits (1363), Expect = e-147
 Identities = 278/386 (72%), Positives = 324/386 (83%), Gaps = 1/386 (0%)
 Frame = -3

Query: 1894 SLKSSILFDLSDAPTQLVEETRINEPVDDHEGKVVVQSGKKEQRRLRRKRALEKGNDSSI 1715
            +LKSS  FDLS+A T+LVEE ++N+ VD+H G+VV +SG+KE R+LRRKR L+K +  + 
Sbjct: 3    TLKSSTSFDLSNATTELVEEPKVNDSVDNHVGEVV-RSGRKELRKLRRKRMLDKESGITT 61

Query: 1714 LELPSETISGDXXXXXXXXXXXXXXKL-KIAKNEAEMSSGVKLVADLEKIQTLLEKETGQ 1538
             ELP+ TIS                K  +IA+NEAEMSSGVKLVA+LEK++T+LE+ETGQ
Sbjct: 62   QELPTVTISKQHKYASARRASRSRNKRQRIARNEAEMSSGVKLVAELEKVRTILEEETGQ 121

Query: 1537 VASLNIWAEAARVEKKVLQQHLQHGWQCREELLRSTRSLVVFIAKNYRGLGVAFEDLIQA 1358
            VASL+ WAEAA ++KK LQQ+L +GW CR+ELLRSTRSLV+FIA+NY GLGVAFEDLIQA
Sbjct: 122  VASLSSWAEAAGIKKKELQQNLHYGWHCRDELLRSTRSLVLFIARNYWGLGVAFEDLIQA 181

Query: 1357 GNFGVLQGAERFDQSRGYKFSTYVQYWIRKSMSIIVARHARGVRIPFMLSKAINQVQKAR 1178
            GN GVLQGAERFDQSRGYKFSTYVQYWIRKSMS +VARHARGVRIP  LSK INQVQ+AR
Sbjct: 182  GNIGVLQGAERFDQSRGYKFSTYVQYWIRKSMSTLVARHARGVRIPCTLSKVINQVQRAR 241

Query: 1177 KALSSSHGKHPDDNEVAKFTGLSIAKITSASKCLRVVGSIDQKMGEGISTKYLEVMPDAS 998
            KALS+S+GK+PDD+++AK+TGLSIAKI SASKCLRVVGSIDQK+GE IS KY+E+ PD S
Sbjct: 242  KALSTSNGKYPDDSDIAKYTGLSIAKIMSASKCLRVVGSIDQKIGEAISAKYMEIAPDTS 301

Query: 997  IMSPEETVTRQQMIQDVYRLLNALEPRERQVLILRFGLGNHQRKSLEEIGRLFFVSKEWI 818
            I+SPEETV RQ MI DV+RLLN LEPRE+QVLILRFGLGN Q KSLEEIGRLF VSKEWI
Sbjct: 302  ILSPEETVIRQHMINDVHRLLNGLEPREKQVLILRFGLGNRQCKSLEEIGRLFCVSKEWI 361

Query: 817  RKIERTALTKLRNGDSHHNLSHYLYM 740
            RKIER AL KLRN DS   LSHY+YM
Sbjct: 362  RKIERAALAKLRNEDSLKILSHYVYM 387


>ref|XP_004245130.1| PREDICTED: RNA polymerase sigma factor sigC [Solanum lycopersicum]
          Length = 551

 Score =  529 bits (1363), Expect = e-147
 Identities = 287/525 (54%), Positives = 368/525 (70%), Gaps = 5/525 (0%)
 Frame = -3

Query: 2308 KGRESIYLTRLPIASAIYGETE-TLIDPLGPRTCSSSPQNLEDNYFGNKEIKMEPRKRSC 2132
            KGRE++Y     +   I G+ E +  DP   +TC S PQ    +     E K    + S 
Sbjct: 31   KGRETLYDPARSLKPFINGDCEPSHSDPFRVQTCLSDPQLWTSDASVTTETKTRNGRGSP 90

Query: 2131 NGLYSLIDDNIQTSAENDKPAFLTSLQATEASQFSLLMKNLDKLEKMFSDSDVIRLERDI 1952
            + +Y  I        + +KP +L +   T++  FSLLMKNLD LE MF+DS++ RLERDI
Sbjct: 91   SNVYGDIGSY---KIDGEKPTYLNT---TKSLHFSLLMKNLDLLENMFADSEMSRLERDI 144

Query: 1951 LQQLKRLGALRLFHTCLSRSLKSSILFDLSDAPTQLVEETRINEPVDDHEGKVVVQSGKK 1772
            L QL++LGAL  FHTCLSR+  SS    + D P +L++E   ++ V +   KVVV+S KK
Sbjct: 145  LVQLEKLGALEFFHTCLSRTHHSSSFPKVLDVPRELIKEVEKDDLVGNAMDKVVVRSRKK 204

Query: 1771 EQRRLRRKRALEKGNDSSILELPSETISGDXXXXXXXXXXXXXXKL----KIAKNEAEMS 1604
            ++R  RRKRA    ND   ++  ++ I  D                    KIAKNEAEMS
Sbjct: 205  QERMSRRKRASRNANDIITVQPHTKNIQEDLQQLKFYSGKRTHASRTKRQKIAKNEAEMS 264

Query: 1603 SGVKLVADLEKIQTLLEKETGQVASLNIWAEAARVEKKVLQQHLQHGWQCREELLRSTRS 1424
             GVKLVA LE+I+++LE+ETGQVA+ + WA+AA +E+K LQQHL  GW CR+ELL+STRS
Sbjct: 265  KGVKLVAQLERIRSILEEETGQVATFSSWAKAAGIEQKELQQHLHFGWYCRDELLKSTRS 324

Query: 1423 LVVFIAKNYRGLGVAFEDLIQAGNFGVLQGAERFDQSRGYKFSTYVQYWIRKSMSIIVAR 1244
            LV+++A+NYRGLGVAFEDLIQAGN GVLQGA RFD +RGYKFSTYVQYWIRKS+S +VA+
Sbjct: 325  LVLYLARNYRGLGVAFEDLIQAGNMGVLQGAVRFDHTRGYKFSTYVQYWIRKSLSKLVAQ 384

Query: 1243 HARGVRIPFMLSKAINQVQKARKALSSSHGKHPDDNEVAKFTGLSIAKITSASKCLRVVG 1064
            HARGVRIPF + K INQ+ KARK LS SHGK P D+E+AKFTGLS A+I  ASKCLRVVG
Sbjct: 385  HARGVRIPFTICKVINQIHKARKTLSRSHGKFPADDEIAKFTGLSTARIAMASKCLRVVG 444

Query: 1063 SIDQKMGEGISTKYLEVMPDASIMSPEETVTRQQMIQDVYRLLNALEPRERQVLILRFGL 884
            SIDQK+G+ I+ K LE+ PD S+ SPEE V RQ ++ ++Y LL +L+P+E+QV+  RFGL
Sbjct: 445  SIDQKVGDCINAKVLELTPDKSVTSPEEFVMRQDIVDNMYALLESLDPKEQQVIYFRFGL 504

Query: 883  GNHQRKSLEEIGRLFFVSKEWIRKIERTALTKLRNGDSHHNLSHY 749
              HQRKSLEEIGRL+ VSKEWIR+IER ALTKLR+ D   +++HY
Sbjct: 505  ETHQRKSLEEIGRLYGVSKEWIRRIERRALTKLRSADYFQHITHY 549


>ref|XP_012077339.1| PREDICTED: RNA polymerase sigma factor sigC [Jatropha curcas]
          Length = 606

 Score =  525 bits (1351), Expect = e-145
 Identities = 295/573 (51%), Positives = 398/573 (69%), Gaps = 8/573 (1%)
 Frame = -3

Query: 2440 FFHWRNSLLEMGFRLDFKCGXXXXXXXXXXXXXXXXXXXXSCRGKGRESIYLTRLPIASA 2261
            FF    + + +GFRL  K G                    + +G+   SI ++RL   S 
Sbjct: 35   FFSSLKTKMGLGFRLSLKLGFPFHSQFHVNSPSRLSSSPSAVKGR-EGSINISRLSFLSV 93

Query: 2260 IYGETETLI-DPLGPRTCSSSP-QNLEDNYFGNKEIKMEPRKRSCNGLYSLIDDNIQTSA 2087
            I  E + L  D L     SSS  Q LE+ +   +E K+   KRS +GL   IDD      
Sbjct: 94   ISEEGDNLHRDHLKTNAYSSSGMQTLENEHSQVEEAKISVGKRSLSGLNDTIDDAQVFIK 153

Query: 2086 ENDKPAFLTSLQATEASQFSLLMKNLDKLEKMFSDSDVIRLERDILQQLKRLGALRLFHT 1907
            E+D     +S   T  S FSLL++NL+ LE+ F+DSDV++LERDIL QL +LGAL+LF+T
Sbjct: 154  EDDFVPPSSSKDRT--SNFSLLLENLNILEESFADSDVLKLERDILLQLGKLGALKLFNT 211

Query: 1906 CLSRSLK--SSILFDLSDAPTQLVEETRINEPVDDHEGKVVVQSGKKEQRRLRRKRA-LE 1736
            CL+R+L+  ++ + D SD PT+ ++E + +   + +  K++V +GKKE+R+ RR+RA L+
Sbjct: 212  CLTRTLEVQTANVLDFSDLPTENIQECKRDGTSNGNVYKIIVCTGKKEERKSRRERASLK 271

Query: 1735 KGNDSSILELPSETIS---GDXXXXXXXXXXXXXXKLKIAKNEAEMSSGVKLVADLEKIQ 1565
             G+      LP ++I    G               +L IA+NEAEMS GVK++A+LEKI+
Sbjct: 272  NGHKVPCFPLPLKSIQNGRGKATSFDKKTSNSKSRRLMIARNEAEMSRGVKVLANLEKIR 331

Query: 1564 TLLEKETGQVASLNIWAEAARVEKKVLQQHLQHGWQCREELLRSTRSLVVFIAKNYRGLG 1385
            T LE+ETG+  SL+ WAEAA ++ KVLQQ L  GW CR+EL+RSTRSLV+F+A+NYRG+G
Sbjct: 332  TTLEQETGRAVSLSCWAEAAGLDMKVLQQQLHFGWYCRDELVRSTRSLVLFLARNYRGMG 391

Query: 1384 VAFEDLIQAGNFGVLQGAERFDQSRGYKFSTYVQYWIRKSMSIIVARHARGVRIPFMLSK 1205
            +A EDL+QAGN GVLQGAERFD +RGY+FSTYVQYWIRKSMS IV+RHARG++IP  LS+
Sbjct: 392  IALEDLLQAGNMGVLQGAERFDDARGYRFSTYVQYWIRKSMSKIVSRHARGIQIPCTLSR 451

Query: 1204 AINQVQKARKALSSSHGKHPDDNEVAKFTGLSIAKITSASKCLRVVGSIDQKMGEGISTK 1025
            AINQ+QKARK LS+SHGK+PDD ++A+FTGLS+AKI SAS+CLRVVGSIDQKMG+  + K
Sbjct: 452  AINQIQKARKNLSASHGKYPDDEDIAEFTGLSLAKIESASRCLRVVGSIDQKMGDCFNAK 511

Query: 1024 YLEVMPDASIMSPEETVTRQQMIQDVYRLLNALEPRERQVLILRFGLGNHQRKSLEEIGR 845
            YLE + D +I SPEE V RQ MI+D++ LL  L+ RERQVLILR+GL +HQ KSLEEIGR
Sbjct: 512  YLEFIHDTTIKSPEEAVMRQHMIKDMHDLLRGLDTRERQVLILRYGLKDHQPKSLEEIGR 571

Query: 844  LFFVSKEWIRKIERTALTKLRNGDSHHNLSHYL 746
            +F VSKEW+R++E+  +T+LRN ++  NL +Y+
Sbjct: 572  VFHVSKEWVRRLEKKVMTRLRNEETCRNLRYYV 604


>gb|KDP34138.1| hypothetical protein JCGZ_07709 [Jatropha curcas]
          Length = 564

 Score =  523 bits (1348), Expect = e-145
 Identities = 290/530 (54%), Positives = 387/530 (73%), Gaps = 9/530 (1%)
 Frame = -3

Query: 2308 KGRE-SIYLTRLPIASAIYGETETLI-DPLGPRTCSSSP-QNLEDNYFGNKEIKMEPRKR 2138
            KGRE SI ++RL   S I  E + L  D L     SSS  Q LE+ +   +E K+   KR
Sbjct: 35   KGREGSINISRLSFLSVISEEGDNLHRDHLKTNAYSSSGMQTLENEHSQVEEAKISVGKR 94

Query: 2137 SCNGLYSLIDDNIQTSAENDKPAFLTSLQATEASQFSLLMKNLDKLEKMFSDSDVIRLER 1958
            S +GL   IDD      E+D     +S   T  S FSLL++NL+ LE+ F+DSDV++LER
Sbjct: 95   SLSGLNDTIDDAQVFIKEDDFVPPSSSKDRT--SNFSLLLENLNILEESFADSDVLKLER 152

Query: 1957 DILQQLKRLGALRLFHTCLSRSLK--SSILFDLSDAPTQLVEETRINEPVDDHEGKVVVQ 1784
            DIL QL +LGAL+LF+TCL+R+L+  ++ + D SD PT+ ++E + +   + +  K++V 
Sbjct: 153  DILLQLGKLGALKLFNTCLTRTLEVQTANVLDFSDLPTENIQECKRDGTSNGNVYKIIVC 212

Query: 1783 SGKKEQRRLRRKRA-LEKGNDSSILELPSETIS---GDXXXXXXXXXXXXXXKLKIAKNE 1616
            +GKKE+R+ RR+RA L+ G+      LP ++I    G               +L IA+NE
Sbjct: 213  TGKKEERKSRRERASLKNGHKVPCFPLPLKSIQNGRGKATSFDKKTSNSKSRRLMIARNE 272

Query: 1615 AEMSSGVKLVADLEKIQTLLEKETGQVASLNIWAEAARVEKKVLQQHLQHGWQCREELLR 1436
            AEMS GVK++A+LEKI+T LE+ETG+  SL+ WAEAA ++ KVLQQ L  GW CR+EL+R
Sbjct: 273  AEMSRGVKVLANLEKIRTTLEQETGRAVSLSCWAEAAGLDMKVLQQQLHFGWYCRDELVR 332

Query: 1435 STRSLVVFIAKNYRGLGVAFEDLIQAGNFGVLQGAERFDQSRGYKFSTYVQYWIRKSMSI 1256
            STRSLV+F+A+NYRG+G+A EDL+QAGN GVLQGAERFD +RGY+FSTYVQYWIRKSMS 
Sbjct: 333  STRSLVLFLARNYRGMGIALEDLLQAGNMGVLQGAERFDDARGYRFSTYVQYWIRKSMSK 392

Query: 1255 IVARHARGVRIPFMLSKAINQVQKARKALSSSHGKHPDDNEVAKFTGLSIAKITSASKCL 1076
            IV+RHARG++IP  LS+AINQ+QKARK LS+SHGK+PDD ++A+FTGLS+AKI SAS+CL
Sbjct: 393  IVSRHARGIQIPCTLSRAINQIQKARKNLSASHGKYPDDEDIAEFTGLSLAKIESASRCL 452

Query: 1075 RVVGSIDQKMGEGISTKYLEVMPDASIMSPEETVTRQQMIQDVYRLLNALEPRERQVLIL 896
            RVVGSIDQKMG+  + KYLE + D +I SPEE V RQ MI+D++ LL  L+ RERQVLIL
Sbjct: 453  RVVGSIDQKMGDCFNAKYLEFIHDTTIKSPEEAVMRQHMIKDMHDLLRGLDTRERQVLIL 512

Query: 895  RFGLGNHQRKSLEEIGRLFFVSKEWIRKIERTALTKLRNGDSHHNLSHYL 746
            R+GL +HQ KSLEEIGR+F VSKEW+R++E+  +T+LRN ++  NL +Y+
Sbjct: 513  RYGLKDHQPKSLEEIGRVFHVSKEWVRRLEKKVMTRLRNEETCRNLRYYV 562


>ref|XP_007222923.1| hypothetical protein PRUPE_ppa003696mg [Prunus persica]
            gi|462419859|gb|EMJ24122.1| hypothetical protein
            PRUPE_ppa003696mg [Prunus persica]
          Length = 555

 Score =  521 bits (1341), Expect = e-144
 Identities = 304/567 (53%), Positives = 384/567 (67%), Gaps = 12/567 (2%)
 Frame = -3

Query: 2410 MGFRLDFKCGXXXXXXXXXXXXXXXXXXXXSCRGKGRE-SIYLTRLPIASAIYGETETLI 2234
            +GFRL+ KCG                        +GRE S    RL   S I  E E   
Sbjct: 3    LGFRLNLKCGFPVHSSHWQTTSPSKISSTSV---RGREGSFNSARLSFLSVISEEGEASS 59

Query: 2233 -DPLGPRTC-SSSPQNLEDNYFGNKEIKMEPRKRSCNGLYSLIDDNIQTSAENDKPAFLT 2060
             DPL   T  S+SPQ LED     +E+K   R+     +     DN    AE     F++
Sbjct: 60   KDPLKVYTFPSASPQILEDGVSELEEVKTAFRR-----VPKSFSDNQMPVAEGK---FIS 111

Query: 2059 S--LQATEASQFSLLMKNLDKLEKMFSDSDVIRLERDILQQLKRLGALRLFHTCLSRSLK 1886
            S  L+A  AS FSLL++NL+ LE+ F+ SDV++LE++IL QL RLGAL+LF  CLSR+LK
Sbjct: 112  SKGLEACTASHFSLLLQNLNVLEETFATSDVLKLEKEILLQLARLGALKLFDICLSRTLK 171

Query: 1885 SSILFDLSDAPTQLVEETRINEPVDDHEGKVVVQSGKKEQRRLRRKRALEKGNDSSILE- 1709
            +S   DLSD PT  VEE ++    D++ G+++V+SGKKE+RR R++ +     D++I+  
Sbjct: 172  TSSFLDLSDIPTVPVEEGKMERKEDNNVGEIIVRSGKKEERRSRKRTS-----DNAIVSS 226

Query: 1708 --LPSETI----SGDXXXXXXXXXXXXXXKLKIAKNEAEMSSGVKLVADLEKIQTLLEKE 1547
              LP +TI                     +L I+KNEAEMS GVK++ADLE+I+  LEKE
Sbjct: 227  NSLPPKTIWKGLKKPTLSSGKRASNYRSRRLTISKNEAEMSIGVKVIADLERIKETLEKE 286

Query: 1546 TGQVASLNIWAEAARVEKKVLQQHLQHGWQCREELLRSTRSLVVFIAKNYRGLGVAFEDL 1367
            TG+VA+L  WAEAA V +KVL QHL+ GW C++EL+RSTRSLV+++A+NYRGLGVA +DL
Sbjct: 287  TGKVATLRCWAEAAGVHEKVLLQHLRFGWYCQDELIRSTRSLVLYLARNYRGLGVALDDL 346

Query: 1366 IQAGNFGVLQGAERFDQSRGYKFSTYVQYWIRKSMSIIVARHARGVRIPFMLSKAINQVQ 1187
            +QAGN G+LQGAERFD SRGY+FSTYVQYWIRKSMS +VA+HARGV+IPF LSKAINQ+Q
Sbjct: 347  MQAGNLGLLQGAERFDHSRGYRFSTYVQYWIRKSMSRLVAQHARGVQIPFTLSKAINQIQ 406

Query: 1186 KARKALSSSHGKHPDDNEVAKFTGLSIAKITSASKCLRVVGSIDQKMGEGISTKYLEVMP 1007
            KARKA  +SH K+PDD E+AK TGLS+A+I SAS CLRVVGS+D KM E     Y+E  P
Sbjct: 407  KARKANYNSHMKYPDDEEIAKITGLSLARIRSASTCLRVVGSVDHKMWESSDGTYMEFTP 466

Query: 1006 DASIMSPEETVTRQQMIQDVYRLLNALEPRERQVLILRFGLGNHQRKSLEEIGRLFFVSK 827
            D S+ SPEETV RQ M +D++ LL  L  RERQVL+LR+GL N+  KSLEEIGRLF VSK
Sbjct: 467  DTSLKSPEETVMRQHMKKDIHDLLKGLNLRERQVLVLRYGLNNYDPKSLEEIGRLFHVSK 526

Query: 826  EWIRKIERTALTKLRNGDSHHNLSHYL 746
            EWIRKIE+ AL KLR  +SH  LSHYL
Sbjct: 527  EWIRKIEKKALMKLRVEESHKYLSHYL 553


>gb|AKC88690.1| sigma factor [Melianthus villosus]
          Length = 558

 Score =  518 bits (1333), Expect = e-143
 Identities = 283/524 (54%), Positives = 369/524 (70%), Gaps = 3/524 (0%)
 Frame = -3

Query: 2308 KGRES-IYLTRLPIASAIYGETETLI-DPLGPRTCS-SSPQNLEDNYFGNKEIKMEPRKR 2138
            +GRE+ I    L   S I  E +T   + L  + CS +SPQ L+      +E+K+   KR
Sbjct: 33   RGREAYISSASLSFLSNISEEGDTCYRNLLNAKACSFASPQTLDGGSLKFEEMKINIGKR 92

Query: 2137 SCNGLYSLIDDNIQTSAENDKPAFLTSLQATEASQFSLLMKNLDKLEKMFSDSDVIRLER 1958
            S + L ++ID N Q   E    + + SL+    SQF LL++NLD LE  F DS++  LE+
Sbjct: 93   SGSNLRNMIDGN-QRLGEGRYTSQI-SLETCNISQFRLLVQNLDTLEGTFVDSNISLLEK 150

Query: 1957 DILQQLKRLGALRLFHTCLSRSLKSSILFDLSDAPTQLVEETRINEPVDDHEGKVVVQSG 1778
            DIL+QL++LGA +LF T LSR+L++S LFDLSD P   +++   N  + D  GK  V SG
Sbjct: 151  DILKQLEKLGARKLFDTRLSRTLRASNLFDLSDVPIGNIKDPETNTIMGDQIGKTFVCSG 210

Query: 1777 KKEQRRLRRKRALEKGNDSSILELPSETISGDXXXXXXXXXXXXXXKLKIAKNEAEMSSG 1598
            KK +R+ RR RA E  N  S + LP + +                 +  IA+NEAEMS G
Sbjct: 211  KKAERKSRRARASENSNKMSSISLPLKAVR---KGFQKPTLSSRGRRTMIARNEAEMSRG 267

Query: 1597 VKLVADLEKIQTLLEKETGQVASLNIWAEAARVEKKVLQQHLQHGWQCREELLRSTRSLV 1418
            VK++ADLE+I+T+LEKETG++A+L+ WAEAA V+KK L QHL +GW CR+ELLRSTRSLV
Sbjct: 268  VKVIADLERIKTILEKETGRIATLSSWAEAAGVDKKDLHQHLLYGWYCRDELLRSTRSLV 327

Query: 1417 VFIAKNYRGLGVAFEDLIQAGNFGVLQGAERFDQSRGYKFSTYVQYWIRKSMSIIVARHA 1238
            +++A+NYRGLG+A EDL+Q+GN GVLQGAERFD +RGYK STYVQYWIRKSMS  VA+HA
Sbjct: 328  LYLARNYRGLGIAHEDLLQSGNLGVLQGAERFDHTRGYKLSTYVQYWIRKSMSRTVAQHA 387

Query: 1237 RGVRIPFMLSKAINQVQKARKALSSSHGKHPDDNEVAKFTGLSIAKITSASKCLRVVGSI 1058
            RGV+IP+ LS+ INQ+QKAR++LSS HG  PDD E+AK TGLS+ KI +A KC RVVGSI
Sbjct: 388  RGVKIPYTLSRVINQIQKARRSLSSIHGNFPDDTEIAKATGLSLEKIGTAKKCFRVVGSI 447

Query: 1057 DQKMGEGISTKYLEVMPDASIMSPEETVTRQQMIQDVYRLLNALEPRERQVLILRFGLGN 878
            DQK+ +  S KY+E+ PD S+ +PEE+V RQ MI+ +Y LL  L+ RE QVL+LRFGL N
Sbjct: 448  DQKLEDCFSVKYMELTPDISVPNPEESVMRQHMIKGIYDLLKCLDQREMQVLVLRFGLHN 507

Query: 877  HQRKSLEEIGRLFFVSKEWIRKIERTALTKLRNGDSHHNLSHYL 746
            H  KSLEEIGR+F VSKEWIR++E+ ALT LRN ++   L HYL
Sbjct: 508  HHPKSLEEIGRIFHVSKEWIRRVEKKALTNLRNAENGRELGHYL 551


>ref|XP_008220144.1| PREDICTED: RNA polymerase sigma factor sigC-like [Prunus mume]
          Length = 553

 Score =  516 bits (1329), Expect = e-143
 Identities = 301/567 (53%), Positives = 381/567 (67%), Gaps = 12/567 (2%)
 Frame = -3

Query: 2410 MGFRLDFKCGXXXXXXXXXXXXXXXXXXXXSCRGKGRE-SIYLTRLPIASAIYGETETLI 2234
            +GFRL+ KCG                        +GRE S    RL   S I  E E   
Sbjct: 3    LGFRLNLKCGFPVHSSYWQTTSPSKLSSTSV---RGREGSFNSARLSFLSVISEEGEASS 59

Query: 2233 -DPLGPRTC-SSSPQNLEDNYFGNKEIKMEPRKRSCNGLYSLIDDNIQTSAENDKPAFLT 2060
             DPL   TC S+SPQ LED     +E       +S       I DN    AE     F++
Sbjct: 60   KDPLKVYTCPSASPQILEDGVSEMEEAAFRRVPKS-------ISDNRMPVAEGK---FIS 109

Query: 2059 S--LQATEASQFSLLMKNLDKLEKMFSDSDVIRLERDILQQLKRLGALRLFHTCLSRSLK 1886
            S  L+A  AS FSLL++NL+ LE+ F+ S+V++LE++IL QL RLGAL+LF  CLSR+LK
Sbjct: 110  SKGLEACTASHFSLLLQNLNVLEETFATSNVLKLEKEILLQLARLGALKLFDICLSRTLK 169

Query: 1885 SSILFDLSDAPTQLVEETRINEPVDDHEGKVVVQSGKKEQRRLRRKRALEKGNDSSILE- 1709
            +S   DLSD PT  VEE ++    D++  +++V+SGKKE+RR R++ +     D++I+  
Sbjct: 170  TSSFLDLSDIPTVPVEEGKMERKEDNNVFEIIVRSGKKEERRSRKRTS-----DNAIVSS 224

Query: 1708 --LPSETI----SGDXXXXXXXXXXXXXXKLKIAKNEAEMSSGVKLVADLEKIQTLLEKE 1547
              LP +TI                     +L I+KNEAEMS GVK++ADLE+I+  LEKE
Sbjct: 225  NSLPPKTIWKGLKNPTLSSGKRASNYRSRRLTISKNEAEMSIGVKVIADLERIKETLEKE 284

Query: 1546 TGQVASLNIWAEAARVEKKVLQQHLQHGWQCREELLRSTRSLVVFIAKNYRGLGVAFEDL 1367
            TG+V +L  WAEAA V ++VL QHL+ GW C++EL+RSTRSLV+++A+NYRGLGVA +DL
Sbjct: 285  TGKVVTLRCWAEAAGVHERVLLQHLRFGWYCQDELMRSTRSLVLYLARNYRGLGVALDDL 344

Query: 1366 IQAGNFGVLQGAERFDQSRGYKFSTYVQYWIRKSMSIIVARHARGVRIPFMLSKAINQVQ 1187
            IQAGN G+LQGAERFD SRGY+FSTYVQYWIRKSMS +VA+HARGV+IPF LSKAINQ+Q
Sbjct: 345  IQAGNLGLLQGAERFDHSRGYRFSTYVQYWIRKSMSRLVAQHARGVQIPFTLSKAINQIQ 404

Query: 1186 KARKALSSSHGKHPDDNEVAKFTGLSIAKITSASKCLRVVGSIDQKMGEGISTKYLEVMP 1007
            KARKA  +SH K+PDD E+AK TGLS+A+I SAS CLRVVGS+D KM E     Y+E  P
Sbjct: 405  KARKANYNSHMKYPDDEEIAKITGLSLARIRSASTCLRVVGSVDHKMWESSDGTYMEFTP 464

Query: 1006 DASIMSPEETVTRQQMIQDVYRLLNALEPRERQVLILRFGLGNHQRKSLEEIGRLFFVSK 827
            D S+ SPEETV RQ M +D++ LL  L  RERQVL+LR+GL N+  KSLEEIGRLF VSK
Sbjct: 465  DTSLKSPEETVMRQHMKKDIHDLLKGLNLRERQVLVLRYGLNNYDPKSLEEIGRLFHVSK 524

Query: 826  EWIRKIERTALTKLRNGDSHHNLSHYL 746
            EWIRKIE+ AL KL+  +SH  LSHYL
Sbjct: 525  EWIRKIEKKALMKLKVEESHKYLSHYL 551


>ref|XP_008365120.1| PREDICTED: RNA polymerase sigma factor sigC-like [Malus domestica]
          Length = 559

 Score =  510 bits (1314), Expect = e-141
 Identities = 290/531 (54%), Positives = 375/531 (70%), Gaps = 10/531 (1%)
 Frame = -3

Query: 2308 KGRE-SIYLTRLPIASAIYGETETL-IDPLGPRTCSS-SPQNLEDNYFGNKEIKME--PR 2144
            +GRE S    RL   S I  E ET   D L   +CSS SPQ LED +   +EI+    P+
Sbjct: 36   RGREGSFNSARLSFLSIISEEGETSGKDTLKIYSCSSASPQILEDGFSNLEEIRFRRVPK 95

Query: 2143 KRSCN--GLYSLIDDNIQTSAENDKPAFLTSLQATEASQFSLLMKNLDKLEKMFSDSDVI 1970
              S N  G   + D + ++S           L+A  A+ FSLL+KNLD LE+ F++SDV+
Sbjct: 96   SSSSNTTGNNQMPDGDFRSSK---------GLEACSAAHFSLLLKNLDALEETFANSDVL 146

Query: 1969 RLERDILQQLKRLGALRLFHTCLSRSLKSSILFDLSDAPTQLVEETRINEPVDDHEGKVV 1790
            +LE +IL QL RLGAL+LF+  LSR+L SS   DLSD PT  +EE ++++ VD+  GK +
Sbjct: 147  KLENEILSQLGRLGALQLFNAYLSRTLTSSSFXDLSDIPTVPIEEYKMDKKVDNDRGKTI 206

Query: 1789 VQSGKKEQRRLRRKRALEKGNDSSILELPSETISGDXXXXXXXXXXXXXXKLK---IAKN 1619
            V SGKKE+RR  RKRA +    SS L  P  T  G               + +   I  N
Sbjct: 207  VWSGKKEERR-SRKRASDNARVSSELLSPKTTWEGFKPPTVSSAKRASXSRRRRXTIVLN 265

Query: 1618 EAEMSSGVKLVADLEKIQTLLEKETGQVASLNIWAEAARVEKKVLQQHLQHGWQCREELL 1439
            EAE+S+GVK++A LE+++  LEKETG VA+L+ WAEAA V KKVL Q L  GW C++EL+
Sbjct: 266  EAELSTGVKVIAKLERVKATLEKETGTVATLSCWAEAAGVHKKVLLQKLHFGWYCQDELI 325

Query: 1438 RSTRSLVVFIAKNYRGLGVAFEDLIQAGNFGVLQGAERFDQSRGYKFSTYVQYWIRKSMS 1259
            RSTRSLV+++A++YRGLGVA +DL+QAGN G+LQGAER+D SRGY+FSTYV+YWI+KSMS
Sbjct: 326  RSTRSLVLYLARSYRGLGVAMDDLLQAGNLGLLQGAERYDPSRGYRFSTYVRYWIKKSMS 385

Query: 1258 IIVARHARGVRIPFMLSKAINQVQKARKALSSSHGKHPDDNEVAKFTGLSIAKITSASKC 1079
             +VARHARG++IPF LSKAINQ+QKARKA  +S  K+PDD+E+AK TGLS+A+I SAS C
Sbjct: 386  RLVARHARGIQIPFTLSKAINQIQKARKATYNSQMKYPDDDEIAKITGLSLARIKSASTC 445

Query: 1078 LRVVGSIDQKMGEGISTKYLEVMPDASIMSPEETVTRQQMIQDVYRLLNALEPRERQVLI 899
            LRVVGSID+KM +  +  ++E   D SI SPEETVTRQ M +D++ LL  L  +ERQVL+
Sbjct: 446  LRVVGSIDEKMWDSSAGTFMEFTADKSIKSPEETVTRQHMKKDIHDLLKCLNSKERQVLV 505

Query: 898  LRFGLGNHQRKSLEEIGRLFFVSKEWIRKIERTALTKLRNGDSHHNLSHYL 746
            LR+GL N+  KSLEEIG+LF VSKEWIRKIE+ ALTKLR+ ++H +LSHYL
Sbjct: 506  LRYGLNNYDPKSLEEIGKLFDVSKEWIRKIEKKALTKLRDDETHRSLSHYL 556