BLASTX nr result
ID: Forsythia22_contig00006288
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Forsythia22_contig00006288
(947 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_009140970.1| PREDICTED: uncharacterized protein LOC103864... 56 2e-07
ref|XP_009109964.1| PREDICTED: putative ribonuclease H protein A... 54 4e-07
ref|XP_009132673.1| PREDICTED: putative ribonuclease H protein A... 48 8e-07
emb|CDY51317.1| BnaCnng20620D [Brassica napus] 49 2e-06
ref|XP_009113011.1| PREDICTED: putative ribonuclease H protein A... 49 2e-06
ref|XP_010512831.1| PREDICTED: uncharacterized protein LOC104788... 54 3e-06
ref|XP_007207089.1| hypothetical protein PRUPE_ppa023640mg, part... 56 4e-06
ref|XP_007203344.1| hypothetical protein PRUPE_ppa020282mg [Prun... 55 5e-06
>ref|XP_009140970.1| PREDICTED: uncharacterized protein LOC103864947 [Brassica rapa]
Length = 1547
Score = 55.8 bits (133), Expect(2) = 2e-07
Identities = 28/65 (43%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Frame = -3
Query: 942 GM*TVGSGYNFLMKETRGEAGTST-NTLQRWWKSVWKLRIPPKIHIFIWRVYHNALPVGG 766
G+ T SGY+ +K R G T N L +W K VW L+I PK+ F+W+ + ALPVG
Sbjct: 1215 GIYTTKSGYHIALKRRRELDGIQTRNALFQWSKGVWNLQIAPKVKFFLWKTFQQALPVGE 1274
Query: 765 NLVRR 751
L R
Sbjct: 1275 VLRHR 1279
Score = 27.3 bits (59), Expect(2) = 2e-07
Identities = 10/31 (32%), Positives = 17/31 (54%)
Frame = -1
Query: 746 INSDGMYGRCGLPETDTHSLFRYSLAKAIWK 654
I +D + RCG PE+ H + A+ +W+
Sbjct: 1281 ILTDNICKRCGTPESINHLFLHCNFARDVWR 1311
>ref|XP_009109964.1| PREDICTED: putative ribonuclease H protein At1g65750 [Brassica
rapa]
Length = 539
Score = 53.5 bits (127), Expect(2) = 4e-07
Identities = 24/62 (38%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Frame = -3
Query: 933 TVGSGYNFLMKETRGEAGT-STNTLQRWWKSVWKLRIPPKIHIFIWRVYHNALPVGGNLV 757
T SGY + + R T T W K++WKL++ PK+ +F+W+++H ALPVG L
Sbjct: 208 TTRSGYTAALLQQRDFPTTLQTTPAFNWQKNIWKLKLAPKVKLFLWKLFHGALPVGTQLR 267
Query: 756 RR 751
R
Sbjct: 268 AR 269
Score = 28.9 bits (63), Expect(2) = 4e-07
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = -1
Query: 746 INSDGMYGRCGLPETDTHSLFRYSLAKAIWKE 651
IN +G CGLPE+ H A+ +W +
Sbjct: 271 INVEGKCKTCGLPESINHLFLECGFAQQVWSQ 302
>ref|XP_009132673.1| PREDICTED: putative ribonuclease H protein At1g65750 [Brassica
rapa]
Length = 824
Score = 48.1 bits (113), Expect(2) = 8e-07
Identities = 18/29 (62%), Positives = 22/29 (75%)
Frame = -3
Query: 855 WWKSVWKLRIPPKIHIFIWRVYHNALPVG 769
W KSVW L PKI +FIW+++H ALPVG
Sbjct: 520 WRKSVWNLHTAPKIKLFIWKIFHRALPVG 548
Score = 33.1 bits (74), Expect(2) = 8e-07
Identities = 15/30 (50%), Positives = 16/30 (53%)
Frame = -1
Query: 746 INSDGMYGRCGLPETDTHSLFRYSLAKAIW 657
IN DG CGLPET H S AK +W
Sbjct: 556 INVDGRCKICGLPETIDHLFLHCSFAKQVW 585
>emb|CDY51317.1| BnaCnng20620D [Brassica napus]
Length = 786
Score = 49.3 bits (116), Expect(2) = 2e-06
Identities = 19/35 (54%), Positives = 24/35 (68%)
Frame = -3
Query: 855 WWKSVWKLRIPPKIHIFIWRVYHNALPVGGNLVRR 751
W K+VWKL PK+ +F+W+ H ALPVG LV R
Sbjct: 487 WKKNVWKLHTAPKVKLFVWKTLHGALPVGEQLVAR 521
Score = 30.4 bits (67), Expect(2) = 2e-06
Identities = 13/31 (41%), Positives = 16/31 (51%)
Frame = -1
Query: 746 INSDGMYGRCGLPETDTHSLFRYSLAKAIWK 654
I DG CGLPE+ H + AK +WK
Sbjct: 523 IKVDGKCKLCGLPESIDHLFLHCNFAKQVWK 553
>ref|XP_009113011.1| PREDICTED: putative ribonuclease H protein At1g65750 [Brassica
rapa]
Length = 682
Score = 48.5 bits (114), Expect(2) = 2e-06
Identities = 20/35 (57%), Positives = 24/35 (68%)
Frame = -3
Query: 855 WWKSVWKLRIPPKIHIFIWRVYHNALPVGGNLVRR 751
W KSVW L PKI +FIW+++H ALPVG L R
Sbjct: 402 WRKSVWNLHTAPKIKLFIWKLFHRALPVGEQLRAR 436
Score = 31.2 bits (69), Expect(2) = 2e-06
Identities = 14/30 (46%), Positives = 15/30 (50%)
Frame = -1
Query: 746 INSDGMYGRCGLPETDTHSLFRYSLAKAIW 657
I DG CGLPET H S AK +W
Sbjct: 438 IKVDGKCKLCGLPETIDHLFLHCSFAKRVW 467
>ref|XP_010512831.1| PREDICTED: uncharacterized protein LOC104788746 [Camelina sativa]
Length = 395
Score = 53.9 bits (128), Expect(2) = 3e-06
Identities = 26/65 (40%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Frame = -3
Query: 942 GM*TVGSGYNF-LMKETRGEAGTSTNTLQRWWKSVWKLRIPPKIHIFIWRVYHNALPVGG 766
G+ TV SGY L +E + + T T W +W+++ PKI I +W+ H+ALPVG
Sbjct: 62 GVYTVKSGYYMALHEEPKDNPESQTTTAYNWKAKLWRIKCSPKIKILLWKALHDALPVGE 121
Query: 765 NLVRR 751
NL R
Sbjct: 122 NLKHR 126
Score = 25.4 bits (54), Expect(2) = 3e-06
Identities = 11/30 (36%), Positives = 14/30 (46%)
Frame = -1
Query: 746 INSDGMYGRCGLPETDTHSLFRYSLAKAIW 657
IN + CG ET H F+ A+ IW
Sbjct: 128 INMEAKCIHCGEEETTLHLFFKCHFAREIW 157
>ref|XP_007207089.1| hypothetical protein PRUPE_ppa023640mg, partial [Prunus persica]
gi|462402731|gb|EMJ08288.1| hypothetical protein
PRUPE_ppa023640mg, partial [Prunus persica]
Length = 294
Score = 55.8 bits (133), Expect(2) = 4e-06
Identities = 28/71 (39%), Positives = 36/71 (50%), Gaps = 7/71 (9%)
Frame = -3
Query: 942 GM*TVGSGYNFLMKETRGEAGTSTN-------TLQRWWKSVWKLRIPPKIHIFIWRVYHN 784
G TV SGY + + G TN ++ WK +WK R+PPK+ IFIWR N
Sbjct: 103 GQYTVRSGYEVARRVLLQQDGDDTNMNRGPIVACEQVWKKIWKARVPPKVCIFIWRALLN 162
Query: 783 ALPVGGNLVRR 751
LP NL+ R
Sbjct: 163 ILPTKDNLIHR 173
Score = 23.1 bits (48), Expect(2) = 4e-06
Identities = 10/21 (47%), Positives = 11/21 (52%)
Frame = -1
Query: 719 CGLPETDTHSLFRYSLAKAIW 657
CG ET H L R +A A W
Sbjct: 184 CGAEETVAHVLLRCPMAIASW 204
>ref|XP_007203344.1| hypothetical protein PRUPE_ppa020282mg [Prunus persica]
gi|462398875|gb|EMJ04543.1| hypothetical protein
PRUPE_ppa020282mg [Prunus persica]
Length = 1496
Score = 55.5 bits (132), Expect(2) = 5e-06
Identities = 27/71 (38%), Positives = 37/71 (52%), Gaps = 7/71 (9%)
Frame = -3
Query: 942 GM*TVGSGYNFLMKETRGEAGTSTN-------TLQRWWKSVWKLRIPPKIHIFIWRVYHN 784
G TV SG++ + + G TN ++ WK +WK R+PPK+ IFIWR N
Sbjct: 1374 GQYTVRSGHDVARRVLLQQDGDDTNMNGGPIVACEQVWKKIWKARVPPKVRIFIWRALLN 1433
Query: 783 ALPVGGNLVRR 751
LP NL+ R
Sbjct: 1434 ILPTKDNLIHR 1444
Score = 23.1 bits (48), Expect(2) = 5e-06
Identities = 10/21 (47%), Positives = 11/21 (52%)
Frame = -1
Query: 719 CGLPETDTHSLFRYSLAKAIW 657
CG ET H L R +A A W
Sbjct: 1455 CGAEETVAHVLLRCPMAIASW 1475