BLASTX nr result

ID: Forsythia22_contig00005947 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Forsythia22_contig00005947
         (1601 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011101534.1| PREDICTED: RNA-binding protein Nova-1 [Sesam...   462   e-127
ref|XP_011076895.1| PREDICTED: RNA-binding protein Nova-2-like [...   423   e-115
ref|XP_009760989.1| PREDICTED: RNA-binding protein Nova-1-like i...   422   e-115
ref|XP_009760990.1| PREDICTED: RNA-binding protein Nova-1-like i...   420   e-114
ref|XP_012834788.1| PREDICTED: RNA-binding protein Nova-1 [Eryth...   410   e-111
ref|XP_004250025.1| PREDICTED: RNA-binding protein Nova-2-like [...   407   e-110
ref|XP_006360517.1| PREDICTED: RNA-binding protein Nova-2-like [...   402   e-109
emb|CDO99819.1| unnamed protein product [Coffea canephora]            396   e-107
ref|XP_004239711.1| PREDICTED: RNA-binding protein Nova-2-like i...   385   e-104
ref|XP_006345844.1| PREDICTED: RNA-binding protein Nova-2-like i...   382   e-103
ref|XP_010321337.1| PREDICTED: RNA-binding protein Nova-2-like i...   381   e-102
ref|XP_009764387.1| PREDICTED: RNA-binding protein Nova-1 isofor...   378   e-102
ref|XP_006345845.1| PREDICTED: RNA-binding protein Nova-2-like i...   378   e-102
ref|XP_009607479.1| PREDICTED: RNA-binding protein Nova-1 isofor...   376   e-101
ref|XP_009764392.1| PREDICTED: RNA-binding protein Nova-1 isofor...   374   e-100
ref|XP_012090458.1| PREDICTED: RNA-binding protein Nova-2 [Jatro...   373   e-100
ref|XP_008232049.1| PREDICTED: RNA-binding protein Nova-2 isofor...   372   e-100
ref|XP_009607480.1| PREDICTED: poly(rC)-binding protein 3 isofor...   372   e-100
ref|XP_002532622.1| Far upstream element-binding protein, putati...   367   1e-98
ref|XP_007010063.1| Binding to TOMV RNA 1L (long form) isoform 1...   367   1e-98

>ref|XP_011101534.1| PREDICTED: RNA-binding protein Nova-1 [Sesamum indicum]
          Length = 321

 Score =  462 bits (1188), Expect = e-127
 Identities = 240/321 (74%), Positives = 274/321 (85%), Gaps = 1/321 (0%)
 Frame = -1

Query: 1349 MATEGTESLNNGSSSEAQHNQSSPRKSTPLPGNEEKTTHIRFLLSNAEAGSVIGKGGSTV 1170
            MA EG+ES+ NG SSE +  QSSPRKSTP PGNE+K TH+RFLLSNAEAGSVIGKGGST+
Sbjct: 1    MAMEGSESVRNGPSSEVRQTQSSPRKSTPPPGNEDKGTHLRFLLSNAEAGSVIGKGGSTI 60

Query: 1169 NDFQSQSGARIQLSRNFEYFPGTADRIIMVSGTVDDTLKAVDLILTKLLDEFYVEDGADV 990
            ND QSQSGAR+QLSR++E FPGT+DRI+MVSGTVDD LKAVDLIL+KLLDEFYVE+G ++
Sbjct: 61   NDIQSQSGARVQLSRSYECFPGTSDRIVMVSGTVDDVLKAVDLILSKLLDEFYVENGGEM 120

Query: 989  EPQSKIRLIVPNSSCXXXXXXXXXXXKSLIEDSQAGIKISPQDDFHPGLHDRLVTVTGTL 810
            +P+SKIRL+VPNSSC           KSLIEDS+A IKISPQD ++PGLHDRLVTVTGTL
Sbjct: 121  DPESKIRLVVPNSSCGGIIGKGGAIIKSLIEDSRADIKISPQDIYYPGLHDRLVTVTGTL 180

Query: 809  GGQMRAIELILLKLVEDPYYQQSASAPFAYTA-AYSXXXXXXXXXXXXXGKYQNDRVQNK 633
            G QMRAIEL+LLKLV+DPYYQQSA+APF Y A  YS             GKY N+RV NK
Sbjct: 181  GEQMRAIELVLLKLVKDPYYQQSANAPFPYPALMYSGMNYGPPNGVGVGGKYLNNRVPNK 240

Query: 632  EDRNSSVTIGVADEHIGLVVGRGGRTLMEISQLSGARIKISDRGDFMAGTSDRKVTITGP 453
            EDR+SSVTIG+ADEH+GLVVGRGGR++MEISQLSGARIKISDRGDFM+GTS+RKVTITG 
Sbjct: 241  EDRSSSVTIGIADEHVGLVVGRGGRSIMEISQLSGARIKISDRGDFMSGTSNRKVTITGS 300

Query: 452  QRAVRTAESMISRKVASVSER 390
            QR+VR AESMISRKVASV+ER
Sbjct: 301  QRSVRIAESMISRKVASVAER 321


>ref|XP_011076895.1| PREDICTED: RNA-binding protein Nova-2-like [Sesamum indicum]
          Length = 321

 Score =  423 bits (1088), Expect = e-115
 Identities = 226/318 (71%), Positives = 257/318 (80%), Gaps = 1/318 (0%)
 Frame = -1

Query: 1349 MATEGTESLNNGSSSEAQHNQSSPRKSTPLPGNEEKTTHIRFLLSNAEAGSVIGKGGSTV 1170
            MA EG +S  + ++SE Q NQSSPRKSTP P N EK TH+RFLLSNAEAGSVIGKGGST+
Sbjct: 1    MAMEGGKSPYSAAASEVQQNQSSPRKSTPPPDNVEKETHLRFLLSNAEAGSVIGKGGSTI 60

Query: 1169 NDFQSQSGARIQLSRNFEYFPGTADRIIMVSGTVDDTLKAVDLILTKLLDEFYVEDGADV 990
            ND QSQSGARIQLSRNFE FPGT+DRIIMVSGTVD+ L AV+LIL+KLLDEFY EDG +V
Sbjct: 61   NDIQSQSGARIQLSRNFECFPGTSDRIIMVSGTVDNILNAVNLILSKLLDEFYAEDGGEV 120

Query: 989  EPQSKIRLIVPNSSCXXXXXXXXXXXKSLIEDSQAGIKISPQDDFHPGLHDRLVTVTGTL 810
            +P+SK RL+VPNSSC           +SL+EDS+A IKISPQD+++PGLHDRLVTV G L
Sbjct: 121  DPESKTRLVVPNSSCGGIIGKGGAIIRSLMEDSRASIKISPQDNYYPGLHDRLVTVAGAL 180

Query: 809  GGQMRAIELILLKLVEDPYYQQSASAPFAYTAAYSXXXXXXXXXXXXXGKYQNDR-VQNK 633
            G QMRAIELILLKLVED YY Q A+APF Y A                GKYQN+R    K
Sbjct: 181  GEQMRAIELILLKLVEDQYYHQYANAPFPYAA----FGGVNYGPNGVGGKYQNNRSTPIK 236

Query: 632  EDRNSSVTIGVADEHIGLVVGRGGRTLMEISQLSGARIKISDRGDFMAGTSDRKVTITGP 453
            EDR+SSVTIG+ADEHIG+VVGRGGR +ME+SQLSGARIKIS+RGDFM+GTSDRKVTITG 
Sbjct: 237  EDRSSSVTIGIADEHIGIVVGRGGRNIMEMSQLSGARIKISERGDFMSGTSDRKVTITGS 296

Query: 452  QRAVRTAESMISRKVASV 399
            QRA+R AESMIS+KVASV
Sbjct: 297  QRAIRLAESMISQKVASV 314


>ref|XP_009760989.1| PREDICTED: RNA-binding protein Nova-1-like isoform X1 [Nicotiana
            sylvestris]
          Length = 341

 Score =  422 bits (1084), Expect = e-115
 Identities = 225/334 (67%), Positives = 264/334 (79%), Gaps = 5/334 (1%)
 Frame = -1

Query: 1349 MATEGTESLNN-GSSSEAQHNQSSPRKSTPLP----GNEEKTTHIRFLLSNAEAGSVIGK 1185
            MA EG  + +N  SS+E+Q  QSSPRKS P       +EEKTT+++FLLSNAEAGS+IGK
Sbjct: 1    MAMEGAGAESNYNSSAESQLEQSSPRKSPPSSPPSQDHEEKTTYVKFLLSNAEAGSIIGK 60

Query: 1184 GGSTVNDFQSQSGARIQLSRNFEYFPGTADRIIMVSGTVDDTLKAVDLILTKLLDEFYVE 1005
            GGST+ +FQS+SGARIQLSRNFE+FPGT+DR++MVSG +DD LKAVDLIL KLLDEFYVE
Sbjct: 61   GGSTITEFQSRSGARIQLSRNFEFFPGTSDRVVMVSGLLDDLLKAVDLILGKLLDEFYVE 120

Query: 1004 DGADVEPQSKIRLIVPNSSCXXXXXXXXXXXKSLIEDSQAGIKISPQDDFHPGLHDRLVT 825
            DG D EP+S+ RL+VPNSSC           KS IEDS+AGIKISPQD+  PGLHDR+VT
Sbjct: 121  DGGDAEPRSRFRLVVPNSSCGGIIGKGGATIKSFIEDSRAGIKISPQDNNFPGLHDRVVT 180

Query: 824  VTGTLGGQMRAIELILLKLVEDPYYQQSASAPFAYTAAYSXXXXXXXXXXXXXGKYQNDR 645
            VTGTL  QMRAIELIL KL EDP+Y QS +APF Y A Y              G+Y N+R
Sbjct: 181  VTGTLDEQMRAIELILYKLAEDPHYMQSMNAPFQYAAVY--VGMNYGPPNGVGGRYPNNR 238

Query: 644  VQNKEDRNSSVTIGVADEHIGLVVGRGGRTLMEISQLSGARIKISDRGDFMAGTSDRKVT 465
             QNKEDRN++VTIGVADEH+GLV+GR GR++MEISQLSGARIKISDRGDF++GTSDRKVT
Sbjct: 239  HQNKEDRNNTVTIGVADEHVGLVLGRNGRSIMEISQLSGARIKISDRGDFLSGTSDRKVT 298

Query: 464  ITGPQRAVRTAESMISRKVASVSER*WNGSDYSY 363
            ITG QRA+RTAESMISRK+A+VSER   G D  +
Sbjct: 299  ITGSQRAIRTAESMISRKIANVSERSTVGEDLPF 332


>ref|XP_009760990.1| PREDICTED: RNA-binding protein Nova-1-like isoform X2 [Nicotiana
            sylvestris]
          Length = 323

 Score =  420 bits (1080), Expect = e-114
 Identities = 223/325 (68%), Positives = 261/325 (80%), Gaps = 5/325 (1%)
 Frame = -1

Query: 1349 MATEGTESLNN-GSSSEAQHNQSSPRKSTPLP----GNEEKTTHIRFLLSNAEAGSVIGK 1185
            MA EG  + +N  SS+E+Q  QSSPRKS P       +EEKTT+++FLLSNAEAGS+IGK
Sbjct: 1    MAMEGAGAESNYNSSAESQLEQSSPRKSPPSSPPSQDHEEKTTYVKFLLSNAEAGSIIGK 60

Query: 1184 GGSTVNDFQSQSGARIQLSRNFEYFPGTADRIIMVSGTVDDTLKAVDLILTKLLDEFYVE 1005
            GGST+ +FQS+SGARIQLSRNFE+FPGT+DR++MVSG +DD LKAVDLIL KLLDEFYVE
Sbjct: 61   GGSTITEFQSRSGARIQLSRNFEFFPGTSDRVVMVSGLLDDLLKAVDLILGKLLDEFYVE 120

Query: 1004 DGADVEPQSKIRLIVPNSSCXXXXXXXXXXXKSLIEDSQAGIKISPQDDFHPGLHDRLVT 825
            DG D EP+S+ RL+VPNSSC           KS IEDS+AGIKISPQD+  PGLHDR+VT
Sbjct: 121  DGGDAEPRSRFRLVVPNSSCGGIIGKGGATIKSFIEDSRAGIKISPQDNNFPGLHDRVVT 180

Query: 824  VTGTLGGQMRAIELILLKLVEDPYYQQSASAPFAYTAAYSXXXXXXXXXXXXXGKYQNDR 645
            VTGTL  QMRAIELIL KL EDP+Y QS +APF Y A Y              G+Y N+R
Sbjct: 181  VTGTLDEQMRAIELILYKLAEDPHYMQSMNAPFQYAAVY--VGMNYGPPNGVGGRYPNNR 238

Query: 644  VQNKEDRNSSVTIGVADEHIGLVVGRGGRTLMEISQLSGARIKISDRGDFMAGTSDRKVT 465
             QNKEDRN++VTIGVADEH+GLV+GR GR++MEISQLSGARIKISDRGDF++GTSDRKVT
Sbjct: 239  HQNKEDRNNTVTIGVADEHVGLVLGRNGRSIMEISQLSGARIKISDRGDFLSGTSDRKVT 298

Query: 464  ITGPQRAVRTAESMISRKVASVSER 390
            ITG QRA+RTAESMISRK+A+VSER
Sbjct: 299  ITGSQRAIRTAESMISRKIANVSER 323


>ref|XP_012834788.1| PREDICTED: RNA-binding protein Nova-1 [Erythranthe guttatus]
            gi|604335785|gb|EYU39673.1| hypothetical protein
            MIMGU_mgv1a010374mg [Erythranthe guttata]
          Length = 314

 Score =  410 bits (1053), Expect = e-111
 Identities = 217/320 (67%), Positives = 253/320 (79%), Gaps = 3/320 (0%)
 Frame = -1

Query: 1340 EGTESLNNGSSSEAQHNQSSPRKSTPLPGNEEKTTHIRFLLSNAEAGSVIGKGGSTVNDF 1161
            EG +S  + +S E Q N S P      P NEEKTTH+RFLLSNAEAGSVIGKGG+T+ND 
Sbjct: 2    EGNKSAYSAASPEEQLNHSPPP-----PDNEEKTTHLRFLLSNAEAGSVIGKGGATINDI 56

Query: 1160 QSQSGARIQLSRNFEYFPGTADRIIMVSGTVDDTLKAVDLILTKLLDEFYVEDGADVEPQ 981
            QSQSGAR+QLSRNFEYFPGT+DRIIMVSGT+DD LKAV+LIL+KLLDEFY EDG + +PQ
Sbjct: 57   QSQSGARVQLSRNFEYFPGTSDRIIMVSGTIDDVLKAVNLILSKLLDEFYPEDGGETDPQ 116

Query: 980  SKIRLIVPNSSCXXXXXXXXXXXKSLIEDSQAGIKISPQDDFHPGLHDRLVTVTGTLGGQ 801
            SKIRL+VPNSSC           +SL+E+S A IKIS QD ++PGLHDRLVTV+G+LG Q
Sbjct: 117  SKIRLVVPNSSCGGIIGKGGSIIRSLMEESSASIKISSQDTYYPGLHDRLVTVSGSLGEQ 176

Query: 800  MRAIELILLKLVEDPYYQQSASAPFAY-TAAYSXXXXXXXXXXXXXGKYQNDRVQNK--E 630
            MRA+ELILLKLVED YY QSA APF Y   AY+              KYQN+R  NK  E
Sbjct: 177  MRAVELILLKLVEDQYYHQSAHAPFPYPVVAYN---GMNYGPNAPGPKYQNNRSPNKPQE 233

Query: 629  DRNSSVTIGVADEHIGLVVGRGGRTLMEISQLSGARIKISDRGDFMAGTSDRKVTITGPQ 450
            DR+SS+TIG+ADEHIG+VVGRGGR +ME+SQLSGARIKIS+RGDFM+GTSDRKVTITG Q
Sbjct: 234  DRSSSITIGIADEHIGIVVGRGGRNIMELSQLSGARIKISERGDFMSGTSDRKVTITGSQ 293

Query: 449  RAVRTAESMISRKVASVSER 390
            R++  AESMIS K+ASV+ER
Sbjct: 294  RSIHMAESMISEKIASVAER 313


>ref|XP_004250025.1| PREDICTED: RNA-binding protein Nova-2-like [Solanum lycopersicum]
          Length = 328

 Score =  407 bits (1047), Expect = e-110
 Identities = 219/327 (66%), Positives = 255/327 (77%), Gaps = 7/327 (2%)
 Frame = -1

Query: 1349 MATEGTESLNNGSSSEAQHNQSSPRKSTP-LPG--NEEKTTHIRFLLSNAEAGSVIGKGG 1179
            MA EG    N  SS+E+Q  QSSPRKS P LP   +EEK T+++FLLSNAEAGS+IGKGG
Sbjct: 1    MAMEGGAESNYNSSTESQLEQSSPRKSPPPLPSQDHEEKATYVKFLLSNAEAGSIIGKGG 60

Query: 1178 STVNDFQSQSGARIQLSRNFEYFPGTADRIIMVSGTVDDTLKAVDLILTKLLDEFYVEDG 999
            ST+ +FQS+SGARIQLSRN+E FPGT DRI+MVSG +DD LKAVDLIL KL+DEFY EDG
Sbjct: 61   STITEFQSRSGARIQLSRNYEVFPGTPDRIVMVSGFLDDILKAVDLILGKLMDEFYAEDG 120

Query: 998  ADVEPQSKIRLIVPNSSCXXXXXXXXXXXKSLIEDSQAGIKISPQDDFHPGLHDRLVTVT 819
             DV+P+SK RL+VPNSSC           KS IEDS+AGIKISPQD   PGLHDR+VTVT
Sbjct: 121  GDVDPRSKFRLVVPNSSCGGIIGKGGATIKSFIEDSRAGIKISPQDYNFPGLHDRIVTVT 180

Query: 818  GTLGGQMRAIELILLKLVEDPYYQQSASAPFAYTAAYSXXXXXXXXXXXXXGKYQNDRVQ 639
            GTL  QMRAIELIL KL +DPYY QS +APF Y A Y              G+Y N+R Q
Sbjct: 181  GTLEEQMRAIELILFKLADDPYYMQSMNAPFQYAAVYVGMNYGYGPPNRVGGRYPNNRQQ 240

Query: 638  NK----EDRNSSVTIGVADEHIGLVVGRGGRTLMEISQLSGARIKISDRGDFMAGTSDRK 471
            NK    E R++S+TIGVADEH+GLV+GR GR+++EISQLSGARIKISDRGDF++GTSDRK
Sbjct: 241  NKVAPLEVRDNSMTIGVADEHVGLVLGRNGRSIIEISQLSGARIKISDRGDFLSGTSDRK 300

Query: 470  VTITGPQRAVRTAESMISRKVASVSER 390
            VTITG QRA+RTAESMISRKVA++S R
Sbjct: 301  VTITGSQRAIRTAESMISRKVATISVR 327


>ref|XP_006360517.1| PREDICTED: RNA-binding protein Nova-2-like [Solanum tuberosum]
          Length = 328

 Score =  402 bits (1033), Expect = e-109
 Identities = 215/327 (65%), Positives = 253/327 (77%), Gaps = 7/327 (2%)
 Frame = -1

Query: 1349 MATEGTESLNNGSSSEAQHNQSSPRKSTPLP---GNEEKTTHIRFLLSNAEAGSVIGKGG 1179
            MA EG    N  SS+E+Q  QSSPRKS P P    +EEK T+++FLLSNAEAGS+IGKGG
Sbjct: 1    MAMEGGAESNYNSSTESQLEQSSPRKSPPPPPSQDHEEKATYVKFLLSNAEAGSIIGKGG 60

Query: 1178 STVNDFQSQSGARIQLSRNFEYFPGTADRIIMVSGTVDDTLKAVDLILTKLLDEFYVEDG 999
            ST+ +FQS+SGARIQLSRN+E FPGT DRI+MVSG +DD LKAVDLIL KL+DEFY EDG
Sbjct: 61   STITEFQSRSGARIQLSRNYEVFPGTPDRIVMVSGFLDDILKAVDLILGKLMDEFYAEDG 120

Query: 998  ADVEPQSKIRLIVPNSSCXXXXXXXXXXXKSLIEDSQAGIKISPQDDFHPGLHDRLVTVT 819
             +V+P+SK RL+VPNSSC           KS IEDS+AGIKISPQD   PGLHDR+VTVT
Sbjct: 121  GEVDPRSKFRLVVPNSSCGGIIGKGGATIKSFIEDSRAGIKISPQDYNFPGLHDRIVTVT 180

Query: 818  GTLGGQMRAIELILLKLVEDPYYQQSASAPFAYTAAYSXXXXXXXXXXXXXGKYQNDRVQ 639
            GTL  QMRAIELIL KL EDP+Y QS +APF Y A Y              G+Y N+R Q
Sbjct: 181  GTLEEQMRAIELILFKLAEDPHYMQSMNAPFQYAAVYVGMNYGYGPPNRVGGRYPNNRQQ 240

Query: 638  NK----EDRNSSVTIGVADEHIGLVVGRGGRTLMEISQLSGARIKISDRGDFMAGTSDRK 471
            NK    E  ++S+TIGVADEH+GLV+GR GR+++EISQLSGARIKISDRGDF++GTSDRK
Sbjct: 241  NKVAPPEVGDNSMTIGVADEHVGLVLGRNGRSIIEISQLSGARIKISDRGDFLSGTSDRK 300

Query: 470  VTITGPQRAVRTAESMISRKVASVSER 390
            VTITG QRA+RTAESMIS+K+A+VS R
Sbjct: 301  VTITGSQRAIRTAESMISQKIATVSVR 327


>emb|CDO99819.1| unnamed protein product [Coffea canephora]
          Length = 317

 Score =  396 bits (1017), Expect = e-107
 Identities = 217/319 (68%), Positives = 250/319 (78%), Gaps = 2/319 (0%)
 Frame = -1

Query: 1340 EGTESLNNGSSSEAQHNQSSPRKSTPLP-GNEEKTTHIRFLLSNAEAGSVIGKGGSTVND 1164
            EG +S    S+  +Q+   SPRKS P P  +EEKTTHI+FLLSNAEAGSVIGKGGST+ND
Sbjct: 2    EGADSGFAASADGSQNQSPSPRKSPPSPTDHEEKTTHIKFLLSNAEAGSVIGKGGSTIND 61

Query: 1163 FQSQSGARIQLSRNFEYFPGTADRIIMVSGTVDDTLKAVDLILTKLLDEFYVEDGADVEP 984
            FQ+QSGARIQLSRNFE+FPGT+DRI+MVSG +DD LKAVDLIL+KLLDEFYVE+G + +P
Sbjct: 62   FQTQSGARIQLSRNFEFFPGTSDRIVMVSGLIDDVLKAVDLILSKLLDEFYVEEGGE-DP 120

Query: 983  QSKIRLIVPNSSCXXXXXXXXXXXKSLIEDSQAGIKISPQDDFHPGLHDRLVTVTGTLGG 804
            + K+RL+VPN  C           KSLIEDS AGIKISP D+ +PGL+DRLVTV GTL  
Sbjct: 121  RFKVRLVVPNGCCGGIIGKGGSIIKSLIEDSHAGIKISPLDNSYPGLYDRLVTVNGTLRE 180

Query: 803  QMRAIELILLKLVEDPYYQQSASAPFAYTAAYSXXXXXXXXXXXXXGKYQNDRVQNK-ED 627
            QMRAIELILLKL ED +Y QS SAPF Y                  GK+QN R QNK E+
Sbjct: 181  QMRAIELILLKLAEDLHYVQSVSAPFPYPVV--GYNGMNYASNGVGGKFQNARSQNKQEE 238

Query: 626  RNSSVTIGVADEHIGLVVGRGGRTLMEISQLSGARIKISDRGDFMAGTSDRKVTITGPQR 447
            R++SVTIGVADEHIGLVVGRGGR + EISQLSGARIKIS+RGDFM+GTSDRKVTITG QR
Sbjct: 239  RSNSVTIGVADEHIGLVVGRGGRNIFEISQLSGARIKISERGDFMSGTSDRKVTITGTQR 298

Query: 446  AVRTAESMISRKVASVSER 390
            A+R AE+MISRKV+ VSER
Sbjct: 299  AIRAAEAMISRKVSPVSER 317


>ref|XP_004239711.1| PREDICTED: RNA-binding protein Nova-2-like isoform X1 [Solanum
            lycopersicum]
          Length = 328

 Score =  385 bits (990), Expect = e-104
 Identities = 212/328 (64%), Positives = 248/328 (75%), Gaps = 9/328 (2%)
 Frame = -1

Query: 1349 MATEGT-ESLNNGSSSEAQHNQSSPRKST---PLPGNEEKTTHIRFLLSNAEAGSVIGKG 1182
            MA EG  +S  N S+   Q + SSPRKS    P   ++E    I+FLLSNAEAGS+IGKG
Sbjct: 1    MAMEGAAQSEYNSSTEGVQEHSSSPRKSQSPPPSTDHDENKISIKFLLSNAEAGSIIGKG 60

Query: 1181 GSTVNDFQSQSGARIQLSRNFEYFPGTADRIIMVSGTVDDTLKAVDLILTKLLDEFYVED 1002
            GST++DFQ++SGARIQLSRN E+FPGT DRI+MVSG +DD LKAVDL+L KLLDE YVED
Sbjct: 61   GSTISDFQARSGARIQLSRNNEFFPGTMDRIVMVSGPIDDVLKAVDLVLNKLLDESYVED 120

Query: 1001 GADVEPQSKIRLIVPNSSCXXXXXXXXXXXKSLIEDSQAGIKISPQDDFHPGLHDRLVTV 822
            G DV P+SK+RL+VPNSSC           KS IEDS+AGIKI PQD+  PGLHDR+V V
Sbjct: 121  GGDVGPRSKVRLVVPNSSCGGIIGKGGSVIKSFIEDSRAGIKILPQDENFPGLHDRIVIV 180

Query: 821  TGTLGGQMRAIELILLKLVEDPYYQQSASAPFAYTAAYSXXXXXXXXXXXXXGKYQNDRV 642
             GTLG QMRAIELIL KL ED +Y Q+ +APF Y AAY              G+Y N+R 
Sbjct: 181  IGTLGEQMRAIELILYKLAEDAHYVQNMNAPFPYAAAY-LGMNYGPPNGVIGGRYPNNRY 239

Query: 641  QNK-----EDRNSSVTIGVADEHIGLVVGRGGRTLMEISQLSGARIKISDRGDFMAGTSD 477
            QNK     EDRN+SVTIGVADEHIGLV+GR GR++MEISQ+SGARIKISDRGDFM+GTSD
Sbjct: 240  QNKMEPNSEDRNNSVTIGVADEHIGLVLGRNGRSVMEISQVSGARIKISDRGDFMSGTSD 299

Query: 476  RKVTITGPQRAVRTAESMISRKVASVSE 393
            RKVTITG QRA+  AESMIS+KVA+V+E
Sbjct: 300  RKVTITGSQRAISIAESMISKKVATVTE 327


>ref|XP_006345844.1| PREDICTED: RNA-binding protein Nova-2-like isoform X1 [Solanum
            tuberosum]
          Length = 327

 Score =  382 bits (981), Expect = e-103
 Identities = 209/326 (64%), Positives = 243/326 (74%), Gaps = 7/326 (2%)
 Frame = -1

Query: 1349 MATEGTESLNNGSSSEA-QHNQSSPRKST---PLPGNEEKTTHIRFLLSNAEAGSVIGKG 1182
            MA EG       SS+E  Q + SSPRKS    P   +EE    I+FLLSNAEAGS+IGKG
Sbjct: 1    MAMEGAAQSEYNSSTEGIQEHSSSPRKSQSPPPSSDHEENKISIKFLLSNAEAGSIIGKG 60

Query: 1181 GSTVNDFQSQSGARIQLSRNFEYFPGTADRIIMVSGTVDDTLKAVDLILTKLLDEFYVED 1002
            GST++DFQ++SGARIQLSRN E+FPGT DRI+MVSG++DD LKAVDLIL KLLDE YVED
Sbjct: 61   GSTISDFQARSGARIQLSRNNEFFPGTMDRIVMVSGSIDDVLKAVDLILNKLLDESYVED 120

Query: 1001 GADVEPQSKIRLIVPNSSCXXXXXXXXXXXKSLIEDSQAGIKISPQDDFHPGLHDRLVTV 822
            G DV P+SK+RL+VPNSSC           KS IEDS+AGIKI PQD+  PGLHDR+V V
Sbjct: 121  GGDVGPRSKVRLVVPNSSCGGIIGKGGSVIKSFIEDSRAGIKILPQDENFPGLHDRIVIV 180

Query: 821  TGTLGGQMRAIELILLKLVEDPYYQQSASAPFAYTAAY---SXXXXXXXXXXXXXGKYQN 651
             GTLG QMRAIELIL KL ED +Y Q+ +APF Y AAY   +              +YQN
Sbjct: 181  IGTLGEQMRAIELILYKLAEDTHYVQNMNAPFPYAAAYLGMNYGPPNGIGGRYPNNRYQN 240

Query: 650  DRVQNKEDRNSSVTIGVADEHIGLVVGRGGRTLMEISQLSGARIKISDRGDFMAGTSDRK 471
                N ED N+SVTIGVADE IGLV+GR GR++MEISQ+SGARIKISDRGDFM+GTSDRK
Sbjct: 241  KMEPNSEDGNNSVTIGVADERIGLVLGRNGRSVMEISQVSGARIKISDRGDFMSGTSDRK 300

Query: 470  VTITGPQRAVRTAESMISRKVASVSE 393
            VTITG QRA+  AESMIS+KVA+V+E
Sbjct: 301  VTITGSQRAISIAESMISKKVATVTE 326


>ref|XP_010321337.1| PREDICTED: RNA-binding protein Nova-2-like isoform X2 [Solanum
            lycopersicum]
          Length = 327

 Score =  381 bits (978), Expect = e-102
 Identities = 212/328 (64%), Positives = 248/328 (75%), Gaps = 9/328 (2%)
 Frame = -1

Query: 1349 MATEGT-ESLNNGSSSEAQHNQSSPRKST---PLPGNEEKTTHIRFLLSNAEAGSVIGKG 1182
            MA EG  +S  N S+   Q + SSPRKS    P   ++E    I+FLLSNAEAGS+IGKG
Sbjct: 1    MAMEGAAQSEYNSSTEGVQEHSSSPRKSQSPPPSTDHDENKISIKFLLSNAEAGSIIGKG 60

Query: 1181 GSTVNDFQSQSGARIQLSRNFEYFPGTADRIIMVSGTVDDTLKAVDLILTKLLDEFYVED 1002
            GST++DFQ++SGARIQLSRN E+FPGT DRI+MVSG +DD LKAVDL+L KLLDE YVED
Sbjct: 61   GSTISDFQARSGARIQLSRNNEFFPGTMDRIVMVSGPIDDVLKAVDLVLNKLLDESYVED 120

Query: 1001 GADVEPQSKIRLIVPNSSCXXXXXXXXXXXKSLIEDSQAGIKISPQDDFHPGLHDRLVTV 822
            G DV P+SK+RL+VPNSSC           KS IEDS+AGIKI PQD+  PGLHDR+V V
Sbjct: 121  GGDVGPRSKVRLVVPNSSCGGIIGKGGSVIKSFIEDSRAGIKILPQDENFPGLHDRIVIV 180

Query: 821  TGTLGGQMRAIELILLKLVEDPYYQQSASAPFAYTAAYSXXXXXXXXXXXXXGKYQNDRV 642
             GTLG QMRAIELIL KL ED +Y Q+ +APF Y AAY              G+Y N+R 
Sbjct: 181  IGTLGEQMRAIELILYKLAEDAHYVQNMNAPFPY-AAY-LGMNYGPPNGVIGGRYPNNRY 238

Query: 641  QNK-----EDRNSSVTIGVADEHIGLVVGRGGRTLMEISQLSGARIKISDRGDFMAGTSD 477
            QNK     EDRN+SVTIGVADEHIGLV+GR GR++MEISQ+SGARIKISDRGDFM+GTSD
Sbjct: 239  QNKMEPNSEDRNNSVTIGVADEHIGLVLGRNGRSVMEISQVSGARIKISDRGDFMSGTSD 298

Query: 476  RKVTITGPQRAVRTAESMISRKVASVSE 393
            RKVTITG QRA+  AESMIS+KVA+V+E
Sbjct: 299  RKVTITGSQRAISIAESMISKKVATVTE 326


>ref|XP_009764387.1| PREDICTED: RNA-binding protein Nova-1 isoform X1 [Nicotiana
            sylvestris]
          Length = 333

 Score =  378 bits (971), Expect = e-102
 Identities = 209/326 (64%), Positives = 243/326 (74%), Gaps = 7/326 (2%)
 Frame = -1

Query: 1349 MATEGTESLNNGSSSEA-QHNQSSPRKST---PLPGNEEKTTHIRFLLSNAEAGSVIGKG 1182
            MA EG    +  SS+E  Q + SSPRKS    P   +EE T  ++FLLSNAEAGSVIGKG
Sbjct: 1    MAMEGGAQSDYNSSTEGLQEHSSSPRKSLSPPPSSDHEENTISVKFLLSNAEAGSVIGKG 60

Query: 1181 GSTVNDFQSQSGARIQLSRNFEYFPGTADRIIMVSGTVDDTLKAVDLILTKLLDEFYVED 1002
            GST++DFQS+SGARIQLSRN E+FPGT DRI+MVSG V+D LKAVD IL KLL E +VED
Sbjct: 61   GSTISDFQSRSGARIQLSRNNEFFPGTTDRIVMVSGPVEDVLKAVDFILNKLLCESHVED 120

Query: 1001 GADVEPQSKIRLIVPNSSCXXXXXXXXXXXKSLIEDSQAGIKISPQDDFHPGLHDRLVTV 822
            G +V+P+SK+RL+VPNSSC           K+ IEDS AGIKIS QDD  PGLHDRLV V
Sbjct: 121  GGNVDPRSKVRLVVPNSSCGGIIGKGGAMIKAFIEDSHAGIKISSQDDNFPGLHDRLVIV 180

Query: 821  TGTLGGQMRAIELILLKLVEDPYYQQSASAPFAYTAAY---SXXXXXXXXXXXXXGKYQN 651
            +GTLG QMRAIELIL KL ED +Y Q+ +APF Y A Y   +              +YQN
Sbjct: 181  SGTLGEQMRAIELILHKLAEDSHYIQNMNAPFPYAAVYVGMNYGPRNGVGGRFPNNRYQN 240

Query: 650  DRVQNKEDRNSSVTIGVADEHIGLVVGRGGRTLMEISQLSGARIKISDRGDFMAGTSDRK 471
            +   N EDRN+SVTIGVADEHIGLV+GR GR++MEISQ SGARIKISDRGDF++GTSDRK
Sbjct: 241  NVQSNSEDRNNSVTIGVADEHIGLVLGRNGRSIMEISQQSGARIKISDRGDFISGTSDRK 300

Query: 470  VTITGPQRAVRTAESMISRKVASVSE 393
            VTITG QRA+  AESMIS+KVA VSE
Sbjct: 301  VTITGSQRAISMAESMISQKVARVSE 326


>ref|XP_006345845.1| PREDICTED: RNA-binding protein Nova-2-like isoform X2 [Solanum
            tuberosum]
          Length = 326

 Score =  378 bits (970), Expect = e-102
 Identities = 207/325 (63%), Positives = 241/325 (74%), Gaps = 6/325 (1%)
 Frame = -1

Query: 1349 MATEGTESLNNGSSSEA-QHNQSSPRKST---PLPGNEEKTTHIRFLLSNAEAGSVIGKG 1182
            MA EG       SS+E  Q + SSPRKS    P   +EE    I+FLLSNAEAGS+IGKG
Sbjct: 1    MAMEGAAQSEYNSSTEGIQEHSSSPRKSQSPPPSSDHEENKISIKFLLSNAEAGSIIGKG 60

Query: 1181 GSTVNDFQSQSGARIQLSRNFEYFPGTADRIIMVSGTVDDTLKAVDLILTKLLDEFYVED 1002
            GST++DFQ++SGARIQLSRN E+FPGT DRI+MVSG++DD LKAVDLIL KLLDE YVED
Sbjct: 61   GSTISDFQARSGARIQLSRNNEFFPGTMDRIVMVSGSIDDVLKAVDLILNKLLDESYVED 120

Query: 1001 GADVEPQSKIRLIVPNSSCXXXXXXXXXXXKSLIEDSQAGIKISPQDDFHPGLHDRLVTV 822
            G DV P+SK+RL+VPNSSC           KS IEDS+AGIKI PQD+  PGLHDR+V V
Sbjct: 121  GGDVGPRSKVRLVVPNSSCGGIIGKGGSVIKSFIEDSRAGIKILPQDENFPGLHDRIVIV 180

Query: 821  TGTLGGQMRAIELILLKLVEDPYYQQSASAPFAYTA--AYSXXXXXXXXXXXXXGKYQND 648
             GTLG QMRAIELIL KL ED +Y Q+ +APF Y A    +              +YQN 
Sbjct: 181  IGTLGEQMRAIELILYKLAEDTHYVQNMNAPFPYAAYLGMNYGPPNGIGGRYPNNRYQNK 240

Query: 647  RVQNKEDRNSSVTIGVADEHIGLVVGRGGRTLMEISQLSGARIKISDRGDFMAGTSDRKV 468
               N ED N+SVTIGVADE IGLV+GR GR++MEISQ+SGARIKISDRGDFM+GTSDRKV
Sbjct: 241  MEPNSEDGNNSVTIGVADERIGLVLGRNGRSVMEISQVSGARIKISDRGDFMSGTSDRKV 300

Query: 467  TITGPQRAVRTAESMISRKVASVSE 393
            TITG QRA+  AESMIS+KVA+V+E
Sbjct: 301  TITGSQRAISIAESMISKKVATVTE 325


>ref|XP_009607479.1| PREDICTED: RNA-binding protein Nova-1 isoform X1 [Nicotiana
            tomentosiformis]
          Length = 333

 Score =  376 bits (965), Expect = e-101
 Identities = 208/326 (63%), Positives = 241/326 (73%), Gaps = 7/326 (2%)
 Frame = -1

Query: 1349 MATEGTESLNNGSSSEA-QHNQSSPRKST---PLPGNEEKTTHIRFLLSNAEAGSVIGKG 1182
            MA EG    +  SS+E  Q + SSPRKS    P   +EE T  ++FLLSNAEAGS+IGKG
Sbjct: 1    MAMEGGAQSDYNSSTEGLQEHSSSPRKSLSPPPSSDHEENTISVKFLLSNAEAGSIIGKG 60

Query: 1181 GSTVNDFQSQSGARIQLSRNFEYFPGTADRIIMVSGTVDDTLKAVDLILTKLLDEFYVED 1002
            GST++DFQ +SGARIQLSRN E+FPGT DRI+MVSG V+D LKAVD IL KLL E YVED
Sbjct: 61   GSTISDFQIRSGARIQLSRNNEFFPGTMDRIVMVSGPVEDVLKAVDFILNKLLCESYVED 120

Query: 1001 GADVEPQSKIRLIVPNSSCXXXXXXXXXXXKSLIEDSQAGIKISPQDDFHPGLHDRLVTV 822
            G +V+P+SK+RL+VPNSSC           K+ IEDS AGIKIS QDD  PGLHDRLV V
Sbjct: 121  GGNVDPRSKVRLVVPNSSCGGIIGKGGAMIKAFIEDSHAGIKISSQDDNFPGLHDRLVIV 180

Query: 821  TGTLGGQMRAIELILLKLVEDPYYQQSASAPFAYTAAY---SXXXXXXXXXXXXXGKYQN 651
            TGTLG QMRAIELIL KL ED +Y Q+ +APF Y A Y   +              +YQN
Sbjct: 181  TGTLGEQMRAIELILHKLAEDSHYIQNMNAPFPYAAVYVGMNYGPRNGVGGRFPANRYQN 240

Query: 650  DRVQNKEDRNSSVTIGVADEHIGLVVGRGGRTLMEISQLSGARIKISDRGDFMAGTSDRK 471
            +   N ED N+SVTIGVADEHIGLV+GR GR++MEISQ SGARIKISDRGDF++GTSDRK
Sbjct: 241  NVQSNSEDGNNSVTIGVADEHIGLVLGRNGRSIMEISQQSGARIKISDRGDFISGTSDRK 300

Query: 470  VTITGPQRAVRTAESMISRKVASVSE 393
            VTITG QRA+  AESMIS+KVA VSE
Sbjct: 301  VTITGSQRAISMAESMISQKVARVSE 326


>ref|XP_009764392.1| PREDICTED: RNA-binding protein Nova-1 isoform X2 [Nicotiana
            sylvestris]
          Length = 332

 Score =  374 bits (960), Expect = e-100
 Identities = 207/325 (63%), Positives = 241/325 (74%), Gaps = 6/325 (1%)
 Frame = -1

Query: 1349 MATEGTESLNNGSSSEA-QHNQSSPRKST---PLPGNEEKTTHIRFLLSNAEAGSVIGKG 1182
            MA EG    +  SS+E  Q + SSPRKS    P   +EE T  ++FLLSNAEAGSVIGKG
Sbjct: 1    MAMEGGAQSDYNSSTEGLQEHSSSPRKSLSPPPSSDHEENTISVKFLLSNAEAGSVIGKG 60

Query: 1181 GSTVNDFQSQSGARIQLSRNFEYFPGTADRIIMVSGTVDDTLKAVDLILTKLLDEFYVED 1002
            GST++DFQS+SGARIQLSRN E+FPGT DRI+MVSG V+D LKAVD IL KLL E +VED
Sbjct: 61   GSTISDFQSRSGARIQLSRNNEFFPGTTDRIVMVSGPVEDVLKAVDFILNKLLCESHVED 120

Query: 1001 GADVEPQSKIRLIVPNSSCXXXXXXXXXXXKSLIEDSQAGIKISPQDDFHPGLHDRLVTV 822
            G +V+P+SK+RL+VPNSSC           K+ IEDS AGIKIS QDD  PGLHDRLV V
Sbjct: 121  GGNVDPRSKVRLVVPNSSCGGIIGKGGAMIKAFIEDSHAGIKISSQDDNFPGLHDRLVIV 180

Query: 821  TGTLGGQMRAIELILLKLVEDPYYQQSASAPFAYT--AAYSXXXXXXXXXXXXXGKYQND 648
            +GTLG QMRAIELIL KL ED +Y Q+ +APF Y      +              +YQN+
Sbjct: 181  SGTLGEQMRAIELILHKLAEDSHYIQNMNAPFPYAVYVGMNYGPRNGVGGRFPNNRYQNN 240

Query: 647  RVQNKEDRNSSVTIGVADEHIGLVVGRGGRTLMEISQLSGARIKISDRGDFMAGTSDRKV 468
               N EDRN+SVTIGVADEHIGLV+GR GR++MEISQ SGARIKISDRGDF++GTSDRKV
Sbjct: 241  VQSNSEDRNNSVTIGVADEHIGLVLGRNGRSIMEISQQSGARIKISDRGDFISGTSDRKV 300

Query: 467  TITGPQRAVRTAESMISRKVASVSE 393
            TITG QRA+  AESMIS+KVA VSE
Sbjct: 301  TITGSQRAISMAESMISQKVARVSE 325


>ref|XP_012090458.1| PREDICTED: RNA-binding protein Nova-2 [Jatropha curcas]
            gi|643739257|gb|KDP45071.1| hypothetical protein
            JCGZ_01571 [Jatropha curcas]
          Length = 315

 Score =  373 bits (957), Expect = e-100
 Identities = 201/317 (63%), Positives = 244/317 (76%)
 Frame = -1

Query: 1340 EGTESLNNGSSSEAQHNQSSPRKSTPLPGNEEKTTHIRFLLSNAEAGSVIGKGGSTVNDF 1161
            E TES +  SS EA   +S P   +P   + E+ T+IRFL+SNA AGSVIGKGG+T+ DF
Sbjct: 2    ESTES-SYVSSPEAPRKRSPPPPKSPTSESIERPTYIRFLVSNAAAGSVIGKGGATITDF 60

Query: 1160 QSQSGARIQLSRNFEYFPGTADRIIMVSGTVDDTLKAVDLILTKLLDEFYVEDGADVEPQ 981
            QSQSGARIQLSRN+E+FPGT+DRIIM+SGT+D+ LKAV+LIL KLL+E + EDG D++P+
Sbjct: 61   QSQSGARIQLSRNYEFFPGTSDRIIMISGTLDEVLKAVELILAKLLNELHTEDGDDIDPK 120

Query: 980  SKIRLIVPNSSCXXXXXXXXXXXKSLIEDSQAGIKISPQDDFHPGLHDRLVTVTGTLGGQ 801
            +K+RLIVPNSSC           KS IE+SQAGIKISPQD+   GL+DRLVT+ GTL  Q
Sbjct: 121  TKVRLIVPNSSCGSIIGKGGSIIKSFIEESQAGIKISPQDNNFYGLNDRLVTLNGTLEEQ 180

Query: 800  MRAIELILLKLVEDPYYQQSASAPFAYTAAYSXXXXXXXXXXXXXGKYQNDRVQNKEDRN 621
            MRAI+LIL KLVEDP+Y Q+  APF+Y  AY+             GK+QN    +KEDR 
Sbjct: 181  MRAIDLILSKLVEDPHYSQTMHAPFSYAVAYN-SMNYGPNGAGPGGKFQN----SKEDRT 235

Query: 620  SSVTIGVADEHIGLVVGRGGRTLMEISQLSGARIKISDRGDFMAGTSDRKVTITGPQRAV 441
            +SVTIG+ADEHIGLVVGRGGR +MEISQ+SGARIKISDRGDFM+GT+DRK+TITG QRA+
Sbjct: 236  NSVTIGIADEHIGLVVGRGGRNIMEISQVSGARIKISDRGDFMSGTNDRKITITGSQRAI 295

Query: 440  RTAESMISRKVASVSER 390
            R AE MI +KVA  SER
Sbjct: 296  RAAEGMIRQKVAYASER 312


>ref|XP_008232049.1| PREDICTED: RNA-binding protein Nova-2 isoform X2 [Prunus mume]
          Length = 314

 Score =  372 bits (955), Expect = e-100
 Identities = 205/317 (64%), Positives = 242/317 (76%)
 Frame = -1

Query: 1340 EGTESLNNGSSSEAQHNQSSPRKSTPLPGNEEKTTHIRFLLSNAEAGSVIGKGGSTVNDF 1161
            E TES +  SS EA   +SSP   +P     EK T++RFL+SNA AGSVIGKGG+T+ DF
Sbjct: 2    ESTES-SYVSSPEAPRRRSSPPPKSPASDTMEKPTYVRFLVSNAAAGSVIGKGGATITDF 60

Query: 1160 QSQSGARIQLSRNFEYFPGTADRIIMVSGTVDDTLKAVDLILTKLLDEFYVEDGADVEPQ 981
            QSQSGARIQLSRN E+FPGT DRIIMVSG++++ LKAVDLIL KLL E Y E+  DVEP+
Sbjct: 61   QSQSGARIQLSRNHEFFPGTTDRIIMVSGSINEILKAVDLILAKLLSELYSEETDDVEPR 120

Query: 980  SKIRLIVPNSSCXXXXXXXXXXXKSLIEDSQAGIKISPQDDFHPGLHDRLVTVTGTLGGQ 801
            +K+RL+VPNSSC           KS IE SQAGIKISPQD+ + GL+DRLVTVTG L  Q
Sbjct: 121  TKLRLVVPNSSCGGIIGKGGSTIKSFIEGSQAGIKISPQDNNYFGLNDRLVTVTGNLDEQ 180

Query: 800  MRAIELILLKLVEDPYYQQSASAPFAYTAAYSXXXXXXXXXXXXXGKYQNDRVQNKEDRN 621
            MRA++LI+ KL EDP+Y QS +APF+Y AAY+             GK+QN    NKEDR+
Sbjct: 181  MRAVDLIVSKLSEDPHYTQSMNAPFSYPAAYN--AMSYGPPNGTGGKFQN----NKEDRS 234

Query: 620  SSVTIGVADEHIGLVVGRGGRTLMEISQLSGARIKISDRGDFMAGTSDRKVTITGPQRAV 441
            +SVTIGVAD HIGLVVGRGGRT+MEISQ SGARIKISDRGDFM+GT+DRKVTITG QRA+
Sbjct: 235  NSVTIGVADSHIGLVVGRGGRTIMEISQASGARIKISDRGDFMSGTTDRKVTITGSQRAI 294

Query: 440  RTAESMISRKVASVSER 390
            R AESMI +KV+  SER
Sbjct: 295  RAAESMILQKVSYASER 311


>ref|XP_009607480.1| PREDICTED: poly(rC)-binding protein 3 isoform X2 [Nicotiana
            tomentosiformis]
          Length = 332

 Score =  372 bits (954), Expect = e-100
 Identities = 206/325 (63%), Positives = 239/325 (73%), Gaps = 6/325 (1%)
 Frame = -1

Query: 1349 MATEGTESLNNGSSSEA-QHNQSSPRKST---PLPGNEEKTTHIRFLLSNAEAGSVIGKG 1182
            MA EG    +  SS+E  Q + SSPRKS    P   +EE T  ++FLLSNAEAGS+IGKG
Sbjct: 1    MAMEGGAQSDYNSSTEGLQEHSSSPRKSLSPPPSSDHEENTISVKFLLSNAEAGSIIGKG 60

Query: 1181 GSTVNDFQSQSGARIQLSRNFEYFPGTADRIIMVSGTVDDTLKAVDLILTKLLDEFYVED 1002
            GST++DFQ +SGARIQLSRN E+FPGT DRI+MVSG V+D LKAVD IL KLL E YVED
Sbjct: 61   GSTISDFQIRSGARIQLSRNNEFFPGTMDRIVMVSGPVEDVLKAVDFILNKLLCESYVED 120

Query: 1001 GADVEPQSKIRLIVPNSSCXXXXXXXXXXXKSLIEDSQAGIKISPQDDFHPGLHDRLVTV 822
            G +V+P+SK+RL+VPNSSC           K+ IEDS AGIKIS QDD  PGLHDRLV V
Sbjct: 121  GGNVDPRSKVRLVVPNSSCGGIIGKGGAMIKAFIEDSHAGIKISSQDDNFPGLHDRLVIV 180

Query: 821  TGTLGGQMRAIELILLKLVEDPYYQQSASAPFAYT--AAYSXXXXXXXXXXXXXGKYQND 648
            TGTLG QMRAIELIL KL ED +Y Q+ +APF Y      +              +YQN+
Sbjct: 181  TGTLGEQMRAIELILHKLAEDSHYIQNMNAPFPYAVYVGMNYGPRNGVGGRFPANRYQNN 240

Query: 647  RVQNKEDRNSSVTIGVADEHIGLVVGRGGRTLMEISQLSGARIKISDRGDFMAGTSDRKV 468
               N ED N+SVTIGVADEHIGLV+GR GR++MEISQ SGARIKISDRGDF++GTSDRKV
Sbjct: 241  VQSNSEDGNNSVTIGVADEHIGLVLGRNGRSIMEISQQSGARIKISDRGDFISGTSDRKV 300

Query: 467  TITGPQRAVRTAESMISRKVASVSE 393
            TITG QRA+  AESMIS+KVA VSE
Sbjct: 301  TITGSQRAISMAESMISQKVARVSE 325


>ref|XP_002532622.1| Far upstream element-binding protein, putative [Ricinus communis]
            gi|223527642|gb|EEF29753.1| Far upstream element-binding
            protein, putative [Ricinus communis]
          Length = 314

 Score =  367 bits (943), Expect = 1e-98
 Identities = 199/323 (61%), Positives = 239/323 (73%)
 Frame = -1

Query: 1340 EGTESLNNGSSSEAQHNQSSPRKSTPLPGNEEKTTHIRFLLSNAEAGSVIGKGGSTVNDF 1161
            E TES    S       +S P   +P   + EK T++RFL+SNA AGSVIGKGG+T+ DF
Sbjct: 2    ESTESSYVSSPEAPPRKRSPPPPKSPTSDSVEKPTYVRFLVSNAAAGSVIGKGGATITDF 61

Query: 1160 QSQSGARIQLSRNFEYFPGTADRIIMVSGTVDDTLKAVDLILTKLLDEFYVEDGADVEPQ 981
            QSQSGARIQLSRN+E+FPGT+DRII++SG +DD LK V+L+L KLL E + EDG DV+P+
Sbjct: 62   QSQSGARIQLSRNYEFFPGTSDRIILISGILDDVLKGVELVLAKLLSELHTEDGDDVDPR 121

Query: 980  SKIRLIVPNSSCXXXXXXXXXXXKSLIEDSQAGIKISPQDDFHPGLHDRLVTVTGTLGGQ 801
            +K+RL+VPNSSC           KS IE+SQAGIKISPQD+   GL+DRLVTVTGTL  Q
Sbjct: 122  TKVRLVVPNSSCGSIIGKGGSIIKSFIEESQAGIKISPQDNNFYGLNDRLVTVTGTLEEQ 181

Query: 800  MRAIELILLKLVEDPYYQQSASAPFAYTAAYSXXXXXXXXXXXXXGKYQNDRVQNKEDRN 621
            MRAI+LIL KL +DP+Y Q+  APF+Y  AY+             GK+QN    NKEDR 
Sbjct: 182  MRAIDLILSKLYDDPHYVQTMHAPFSYAVAYN---SMNYGANGAGGKFQN----NKEDRT 234

Query: 620  SSVTIGVADEHIGLVVGRGGRTLMEISQLSGARIKISDRGDFMAGTSDRKVTITGPQRAV 441
            +SVTIGVAD HIGLVVGRGGR +MEISQ+SGARIKISDRGDFM+GT+DRK+ ITG QRA+
Sbjct: 235  NSVTIGVADAHIGLVVGRGGRNIMEISQVSGARIKISDRGDFMSGTNDRKIIITGSQRAI 294

Query: 440  RTAESMISRKVASVSER*WNGSD 372
            RTAE MI +KVA  SER   GSD
Sbjct: 295  RTAEGMIMQKVAYASER---GSD 314


>ref|XP_007010063.1| Binding to TOMV RNA 1L (long form) isoform 1 [Theobroma cacao]
            gi|590565855|ref|XP_007010065.1| Binding to TOMV RNA 1L
            (long form) isoform 1 [Theobroma cacao]
            gi|590565859|ref|XP_007010066.1| Binding to TOMV RNA 1L
            (long form) isoform 1 [Theobroma cacao]
            gi|508726976|gb|EOY18873.1| Binding to TOMV RNA 1L (long
            form) isoform 1 [Theobroma cacao]
            gi|508726978|gb|EOY18875.1| Binding to TOMV RNA 1L (long
            form) isoform 1 [Theobroma cacao]
            gi|508726979|gb|EOY18876.1| Binding to TOMV RNA 1L (long
            form) isoform 1 [Theobroma cacao]
          Length = 313

 Score =  367 bits (942), Expect = 1e-98
 Identities = 202/317 (63%), Positives = 242/317 (76%)
 Frame = -1

Query: 1340 EGTESLNNGSSSEAQHNQSSPRKSTPLPGNEEKTTHIRFLLSNAEAGSVIGKGGSTVNDF 1161
            E TES +  SS EA   +S P   +P     EK T+IRFL+SNA AGSVIGKGGST+ +F
Sbjct: 2    ESTES-SYVSSPEAARKRSPPPPKSPTSETAEKHTYIRFLVSNAAAGSVIGKGGSTITEF 60

Query: 1160 QSQSGARIQLSRNFEYFPGTADRIIMVSGTVDDTLKAVDLILTKLLDEFYVEDGADVEPQ 981
            QS+SGARIQLSRN E+FPGT+DRIIM+SGT+D+ LKA++LIL KLL+E  +ED  DVEP+
Sbjct: 61   QSKSGARIQLSRNHEFFPGTSDRIIMISGTIDEVLKAMELILAKLLNELNIEDNDDVEPR 120

Query: 980  SKIRLIVPNSSCXXXXXXXXXXXKSLIEDSQAGIKISPQDDFHPGLHDRLVTVTGTLGGQ 801
            +K+RLIVPNSSC           KS IEDSQAGIKISPQD+   GL+DRLVT+TGTL  Q
Sbjct: 121  TKVRLIVPNSSCGSIIGKGGATIKSFIEDSQAGIKISPQDNNFYGLNDRLVTLTGTLDEQ 180

Query: 800  MRAIELILLKLVEDPYYQQSASAPFAYTAAYSXXXXXXXXXXXXXGKYQNDRVQNKEDRN 621
            MRAI+LIL KL EDP+Y Q+  APF+Y A Y+             GK+QN    +KEDR+
Sbjct: 181  MRAIDLILSKLSEDPHYLQAMHAPFSYAATYN---SMSYPSNGAGGKFQN----HKEDRS 233

Query: 620  SSVTIGVADEHIGLVVGRGGRTLMEISQLSGARIKISDRGDFMAGTSDRKVTITGPQRAV 441
            +SVTIGVAD HIGLV+GRGGR +MEISQLSGARIKISDRGDFM+GT+DRKVTITG QRA+
Sbjct: 234  NSVTIGVADGHIGLVLGRGGRNIMEISQLSGARIKISDRGDFMSGTTDRKVTITGSQRAI 293

Query: 440  RTAESMISRKVASVSER 390
            R AESMI +KVA  ++R
Sbjct: 294  RQAESMIMQKVAYATDR 310


Top