BLASTX nr result
ID: Forsythia22_contig00004785
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Forsythia22_contig00004785 (2315 letters) Database: ./nr 69,698,275 sequences; 24,982,196,650 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_011071167.1| PREDICTED: cleavage and polyadenylation spec... 712 0.0 emb|CDP13267.1| unnamed protein product [Coffea canephora] 664 0.0 ref|XP_012845456.1| PREDICTED: cleavage and polyadenylation spec... 612 e-172 ref|XP_012085540.1| PREDICTED: cleavage and polyadenylation spec... 561 e-157 ref|XP_012085551.1| PREDICTED: cleavage and polyadenylation spec... 556 e-155 ref|XP_007044904.1| RNA-binding family protein isoform 1 [Theobr... 554 e-154 ref|XP_007044902.1| RNA-binding family protein isoform 1 [Theobr... 541 e-151 ref|XP_007044908.1| RNA-binding family protein isoform 5, partia... 536 e-149 ref|XP_007044907.1| RNA-binding family protein isoform 4 [Theobr... 525 e-146 ref|XP_011457426.1| PREDICTED: cleavage and polyadenylation spec... 504 e-139 ref|XP_002312652.1| RNA recognition motif-containing family prot... 501 e-139 ref|XP_007044909.1| RNA-binding family protein isoform 6 [Theobr... 493 e-136 ref|XP_011042356.1| PREDICTED: cleavage and polyadenylation spec... 488 e-135 ref|XP_006378268.1| hypothetical protein POPTR_0010s06150g [Popu... 444 e-121 ref|XP_002315647.1| RNA recognition motif-containing family prot... 434 e-118 ref|XP_009619090.1| PREDICTED: cleavage and polyadenylation spec... 425 e-116 ref|XP_009780918.1| PREDICTED: cleavage and polyadenylation spec... 416 e-113 ref|XP_006341786.1| PREDICTED: cleavage and polyadenylation spec... 411 e-111 ref|XP_010251347.1| PREDICTED: RNA-binding motif protein, X chro... 387 e-104 ref|XP_008221952.1| PREDICTED: cleavage and polyadenylation spec... 384 e-103 >ref|XP_011071167.1| PREDICTED: cleavage and polyadenylation specificity factor subunit 6 [Sesamum indicum] Length = 643 Score = 712 bits (1837), Expect = 0.0 Identities = 385/648 (59%), Positives = 425/648 (65%), Gaps = 2/648 (0%) Frame = -1 Query: 2084 MDPVADEQLDYGDGEYG--QKMQYHQVGAIPALVEEEMIGEXXXXXXXXXXXXVGEGFLQ 1911 MDPV EQLDYGD EY QKMQYHQ GAIPAL EEEMIGE VGEGFLQ Sbjct: 1 MDPVTGEQLDYGDEEYAGSQKMQYHQGGAIPALAEEEMIGEEDEYDDLYNDVNVGEGFLQ 60 Query: 1910 LQQAEAQMPAPGVGNGGSRAPKANVPDARNEARVLQEVNIPGVAKEQNYASSSIQFPEQK 1731 +Q++EAQMP+ GVGNGG + K+NVP R EA QEV V E NY + +QFPEQK Sbjct: 61 MQRSEAQMPS-GVGNGGFQGSKSNVPGIRAEAIAPQEVTNARVTSEGNYLPTGVQFPEQK 119 Query: 1730 SGLPADGRPEQIVDASQRGRISEMTHKSQAGHLGFQGSVPMPQKIAADPINLSGKVPGEP 1551 + PA G P Q VDASQRGR+ EM H SQ GHLG+QGSV MPQK AAD +N K+ GEP Sbjct: 120 TAFPAAGGPAQTVDASQRGRLPEMVHNSQPGHLGYQGSVSMPQKTAADRMNKPEKIVGEP 179 Query: 1550 SPLPNPTVGSSRGVPEIPASRMNPSSNVNVNRMVDNENLIRPAVENGNTMLFVGELHWWT 1371 +P PNP +GSS+G P+IP + MN S+NVN+NR VD+E LIRPAVENGNTMLFVGELHWWT Sbjct: 180 APSPNPNMGSSKGGPQIPTTMMNSSANVNINRPVDDEYLIRPAVENGNTMLFVGELHWWT 239 Query: 1370 TDAELETVLTQYGMVKEIKFFDERASGKSKGYCQVEFYDPAAASACKDGMNGYVFNGRAC 1191 TDAELE+VL QYG VKEIKFFDERASGKSKGYCQVEFYDPAAA+ACK+GM+G++FNGRAC Sbjct: 240 TDAELESVLIQYGKVKEIKFFDERASGKSKGYCQVEFYDPAAAAACKEGMHGHLFNGRAC 299 Query: 1190 VVAFATPQTIKQMGASYMNKTQAQAPSQPQGRRPMNDGAGRGNGATYPSXXXXXXXXXXX 1011 VVAFATPQTIKQMG+SYMNKTQ Q SQ QGR +NDGAGRGNG YPS Sbjct: 300 VVAFATPQTIKQMGSSYMNKTQTQGQSQQQGRNLINDGAGRGNGTNYPSGDTGRNFGRGG 359 Query: 1010 XXXXGQQLXXXXXXXXXXXXXXXXGTKNMIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 831 G Q+ G KNMI Sbjct: 360 WGRGGNQVPNKGPGPGPVRGRGGMGNKNMI----GNAPGAGGGAYGQAGLAGPGFGGPPG 415 Query: 830 XXXXXXXXXXGFDPAFMGRGAGYGGFSGPAFPGMLPPFQAVNPMGLPGVAPHVNPAFFXX 651 GFD AFMGRG GY GFSGPAFPGMLPP+ AVN MGLPGVAPHVNPAFF Sbjct: 416 MMHPQGMMGPGFDLAFMGRGGGYAGFSGPAFPGMLPPYPAVNSMGLPGVAPHVNPAFFSR 475 Query: 650 XXXXXXXXXXXXXXXXGPHSGMWNDPNMXXXXXXXXXXXXXESSYGGEDNASEYGYGEAS 471 GPHSGMW D N+ ESSYGGEDNASEYGYGEAS Sbjct: 476 GMAPNGMGMMGTTGMDGPHSGMWPDMNLGGWGGEEHGRGTRESSYGGEDNASEYGYGEAS 535 Query: 470 LDKGVRPSAASREKERNSERDWSSNSXXXXXXXXXXXXXXXXXXXXXXXXKDGYRDYRNK 291 +KGVR SAASREKERNSERDWSSN KD +RDYR+K Sbjct: 536 HEKGVRSSAASREKERNSERDWSSNPEKRHREERDHDGDRYDRDHKYREEKDRHRDYRHK 595 Query: 290 ERDLGYEDDWDRGQXXXXXXXXRAVPEEDHRSRSRDADYGKRRRIPSE 147 +RDLGY+DDWDRGQ RAVP +DHRSRSRDADYGKR+R+PSE Sbjct: 596 DRDLGYDDDWDRGQSSRSRSRSRAVPGDDHRSRSRDADYGKRKRMPSE 643 >emb|CDP13267.1| unnamed protein product [Coffea canephora] Length = 655 Score = 664 bits (1714), Expect = 0.0 Identities = 374/656 (57%), Positives = 421/656 (64%), Gaps = 10/656 (1%) Frame = -1 Query: 2084 MDPVADEQLDYGDGEYG--QKMQYHQVGAIPALVEEEMIGEXXXXXXXXXXXXVGEGFLQ 1911 MDP DEQLD+GD EYG QKMQYH+ GAIPAL E+EMI E VGEGFLQ Sbjct: 1 MDPGGDEQLDFGDEEYGGSQKMQYHRGGAIPALAEDEMINEDDEYDDLYNDVNVGEGFLQ 60 Query: 1910 LQQAE-AQMP-AP-GVGNGGSRAPKANVPDARNEARVLQEVNIPGVAKEQNYASSSIQFP 1740 +QQ + ++ P AP GVGNGG AP+A+V D R E V Q VNIP A E Y +S ++FP Sbjct: 61 MQQQQRSETPRAPLGVGNGGFPAPRASVQDPRAETVVTQGVNIPRSATEGKYTNSGVRFP 120 Query: 1739 EQKSGLPADGRPEQIVDASQRGRISEMTHKSQAGHLGFQGS--VPMPQKIAADPINLSGK 1566 +QKSGL +D DASQ+GR E+ H SQAG+LG+QGS V M QK+ + +++SGK Sbjct: 121 DQKSGLASDVGALPGTDASQKGRAPEIIHNSQAGNLGYQGSMAVAMSQKVGVESLDMSGK 180 Query: 1565 VPGEPSPLPNPTVGSSRGVPEIPASRMNPSSNVNVNRMVDNENLIRPAVENGNTMLFVGE 1386 V GEP PL NP G+ R +P++PA+ M+ SSNVN R V EN +RPAVENGNTMLFVGE Sbjct: 181 VTGEPGPLLNPVAGAPRVIPQVPANHMSSSSNVNSIRPVVTENQVRPAVENGNTMLFVGE 240 Query: 1385 LHWWTTDAELETVLTQYGMVKEIKFFDERASGKSKGYCQVEFYDPAAASACKDGMNGYVF 1206 LHWWTTD ELE+VLTQYG VKEIKFFDERASGKSKGYCQVEF DPAAA+ACK+GMNG+VF Sbjct: 241 LHWWTTDTELESVLTQYGKVKEIKFFDERASGKSKGYCQVEFSDPAAAAACKEGMNGHVF 300 Query: 1205 NGRACVVAFATPQTIKQMGASYMNKT--QAQAPSQPQGRRPMNDGAGRGNGATYPS-XXX 1035 NGRACVVA ATPQTIKQM ASYMNKT Q+Q+ SQPQGRRPMNDGAGRGNG YPS Sbjct: 301 NGRACVVALATPQTIKQMAASYMNKTQVQSQSQSQPQGRRPMNDGAGRGNGTNYPSGDAG 360 Query: 1034 XXXXXXXXXXXXGQQLXXXXXXXXXXXXXXXXGTKNMIXXXXXXXXXXXXXXXXXXXXXX 855 GQ + G KNM+ Sbjct: 361 RNFGRGGWAGRGGQGMPNKAPVGVPGRGRGTVGAKNMMGNAPGGGNGVTGGAYGQGLAGP 420 Query: 854 XXXXXXXXXXXXXXXXXXGFDPAFMGRGAGYGGFSGPAFPGMLPPFQAVNPMGLPGVAPH 675 GFDP +MGRGAGYGGFSGPAFPGM+PPF AVN MGL GVAPH Sbjct: 421 AFGGPPTGLMHPQAMMGPGFDPTYMGRGAGYGGFSGPAFPGMIPPFPAVNHMGLAGVAPH 480 Query: 674 VNPAFFXXXXXXXXXXXXXXXXXXGPHSGMWNDPNMXXXXXXXXXXXXXESSYGGEDNAS 495 VNPAFF GPH+GMW D +M ESSYGGEDNAS Sbjct: 481 VNPAFFGRGMAANGMGMMGTGGMDGPHAGMWTDTSM-GWGGEEHGRRTRESSYGGEDNAS 539 Query: 494 EYGYGEASLDKGVRPSAASREKERNSERDWSSNSXXXXXXXXXXXXXXXXXXXXXXXXKD 315 EYGYGEAS DKGVR SAASREKER SERDWS +S KD Sbjct: 540 EYGYGEASHDKGVRSSAASREKERGSERDWSGSSDRRHRDEREHDRDRYDRDHRYREEKD 599 Query: 314 GYRDYRNKERDLGYEDDWDRGQXXXXXXXXRAVPEEDHRSRSRDADYGKRRRIPSE 147 YR+YR+KERD GYEDD+DRGQ RAVPEE HRSRSRDADYGKRRR+PSE Sbjct: 600 SYREYRHKERDPGYEDDYDRGQPSRSRSRSRAVPEEHHRSRSRDADYGKRRRLPSE 655 >ref|XP_012845456.1| PREDICTED: cleavage and polyadenylation specificity factor subunit 6 [Erythranthe guttatus] gi|604319404|gb|EYU30596.1| hypothetical protein MIMGU_mgv1a002773mg [Erythranthe guttata] Length = 639 Score = 612 bits (1578), Expect = e-172 Identities = 350/651 (53%), Positives = 395/651 (60%), Gaps = 5/651 (0%) Frame = -1 Query: 2084 MDPVADEQLDYGDGEYG--QKMQYHQVGAIPALVEEEMIGEXXXXXXXXXXXXVGEGFLQ 1911 MDPV DEQLDYGD EYG QKMQYH GAIPAL E+EMIG+ VGEGF+Q Sbjct: 1 MDPVTDEQLDYGDEEYGGNQKMQYHHGGAIPALAEDEMIGDDDEYDDLYNDVNVGEGFMQ 60 Query: 1910 LQQAEAQMPAPGVGNGGSRAPKANVPDARNEARVLQEVNIPGVAKEQNYASSSIQFPEQK 1731 +Q++EA P+ VGN K P R EA QEVN V E +YA + +Q +QK Sbjct: 61 MQRSEAPPPS-AVGNNSFSISKNTAPGTRAEAIASQEVNNGRVGNEGSYAPNGVQLSDQK 119 Query: 1730 SGLPADGRPEQIVDASQRGRISEMTHKSQAGHLGFQGSVPMPQKIAADPINLSGKVPGEP 1551 + L A G P Q VDASQR R+ E+ + SQA HLG+QGS M K A D +N S + GEP Sbjct: 120 NNLTAVGGPAQPVDASQRVRLPEVANSSQAAHLGYQGSEIMLHKTATDRMNNSENIVGEP 179 Query: 1550 SPLPNPTVGSSRGVPEIPASRMNPSSNVNVN--RMVDNENLIRPAV-ENGNTMLFVGELH 1380 + L P GSS+GVP+ P++ MN ++NVNVN R +D+E LIRP+ ENGN M++VGELH Sbjct: 180 ASLVYPNTGSSKGVPQAPSNLMNSNANVNVNVNRSMDDEYLIRPSGGENGNPMIYVGELH 239 Query: 1379 WWTTDAELETVLTQYGMVKEIKFFDERASGKSKGYCQVEFYDPAAASACKDGMNGYVFNG 1200 WWTTDAE+E+VL QYG VKEIKFFDERASGKSKGYCQVEFYDPAAA+ACKDGM G++FNG Sbjct: 240 WWTTDAEVESVLIQYGRVKEIKFFDERASGKSKGYCQVEFYDPAAATACKDGMQGHIFNG 299 Query: 1199 RACVVAFATPQTIKQMGASYMNKTQAQAPSQPQGRRPMNDGAGRGNGATYPSXXXXXXXX 1020 RACVV +A PQT KQMGASY NK Q Q+ SQ QGR PMNDGAGRGNG YPS Sbjct: 300 RACVVTYANPQTSKQMGASY-NKNQGQSQSQLQGRNPMNDGAGRGNGTNYPSGDAGRNFG 358 Query: 1019 XXXXXXXGQQLXXXXXXXXXXXXXXXXGTKNMIXXXXXXXXXXXXXXXXXXXXXXXXXXX 840 G Q G KNMI Sbjct: 359 RGGGWGRGNQAPNRGPGAGPIRGRGGMGNKNMI----GNAPGAGGGGAYGQGLNGPGFGG 414 Query: 839 XXXXXXXXXXXXXGFDPAFMGRGAGYGGFSGPAFPGMLPPFQAVNPMGLPGVAPHVNPAF 660 GFD AFMGRG GYGGFSGP F GMLPPFQ VN MGLPGVAPHVNPAF Sbjct: 415 PPGMMHPQGMMGPGFDLAFMGRGGGYGGFSGPPFQGMLPPFQGVNSMGLPGVAPHVNPAF 474 Query: 659 FXXXXXXXXXXXXXXXXXXGPHSGMWNDPNMXXXXXXXXXXXXXESSYGGEDNASEYGYG 480 F GPHSGMWNDPNM ESSYGGEDNASEYGYG Sbjct: 475 FGRGMNPNGMGMMGNPGMVGPHSGMWNDPNM---GGWGGEEHGRESSYGGEDNASEYGYG 531 Query: 479 EASLDKGVRPSAASREKERNSERDWSSNSXXXXXXXXXXXXXXXXXXXXXXXXKDGYRDY 300 E S DK VR SAA REKER SER++ KD YR++ Sbjct: 532 EGSHDKSVRSSAAPREKERTSEREYPERK---HREERENDGERNDRDSKYREEKDRYREH 588 Query: 299 RNKERDLGYEDDWDRGQXXXXXXXXRAVPEEDHRSRSRDADYGKRRRIPSE 147 R+KER+ GY+DDWDRGQ AV EEDHRSRSRDADYGKRRR+PSE Sbjct: 589 RHKERESGYDDDWDRGQSSRSRSRSGAVQEEDHRSRSRDADYGKRRRMPSE 639 >ref|XP_012085540.1| PREDICTED: cleavage and polyadenylation specificity factor subunit 6-like [Jatropha curcas] gi|802723858|ref|XP_012085541.1| PREDICTED: cleavage and polyadenylation specificity factor subunit 6-like [Jatropha curcas] gi|643714040|gb|KDP26705.1| hypothetical protein JCGZ_17863 [Jatropha curcas] Length = 651 Score = 561 bits (1446), Expect = e-157 Identities = 322/659 (48%), Positives = 387/659 (58%), Gaps = 16/659 (2%) Frame = -1 Query: 2075 VADEQLDYGDGEYG--QKMQYHQVGAIPALVEEEMIGEXXXXXXXXXXXXVGEGFLQLQQ 1902 +ADEQ+DY D EYG QKMQY GAIPAL EEEM GE VGE FLQ+ Q Sbjct: 1 MADEQIDYEDEEYGGAQKMQYQGSGAIPALAEEEM-GEDDEYDDLYNDVNVGENFLQMHQ 59 Query: 1901 AEAQMPAPGVGNGGSRAPKANVPDARNEARVLQEVNIPGVAKEQNYASSSIQFPEQK--- 1731 +E P + +GG +A N P Q +NIPG E Y++ FPEQK Sbjct: 60 SEVPPPTTSISSGGFQAQNVNEPRVGTGGS--QGLNIPGGVVEGKYSNVETHFPEQKEVP 117 Query: 1730 -----SGLPADGRPEQIVDASQRGRISEMTHKSQAGHLGFQGSVPMPQKIAADPINLSGK 1566 + + + G P+ V +Q+GR+ E+TH SQA ++GFQGS +P + DP ++S K Sbjct: 118 MGAKGAEMGSVGYPDGSV--TQKGRVMEVTHDSQARNIGFQGSSSVPSNVVVDPSDMSRK 175 Query: 1565 VPGEPSPLPNPTVGSSRGVPEIPASRMNPSSNVNVNRMVDNENLIRPAVENGNTMLFVGE 1386 +P EP+P+PN ++ RG+ ++P +++ S N++VNR NEN IRP VENG+T+LFVGE Sbjct: 176 IPNEPAPVPNTSISGPRGIQQLPGNQI--SINIDVNRPGMNENQIRPPVENGSTVLFVGE 233 Query: 1385 LHWWTTDAELETVLTQYGMVKEIKFFDERASGKSKGYCQVEFYDPAAASACKDGMNGYVF 1206 LHWWTTDAELE+VL+QYG VKEIKFFDERASGKSKG+CQVEFYD AAA+ACK+GMNG+VF Sbjct: 234 LHWWTTDAELESVLSQYGKVKEIKFFDERASGKSKGFCQVEFYDAAAAAACKEGMNGHVF 293 Query: 1205 NGRACVVAFATPQTIKQMGASYMNKTQAQAPSQPQGRRPMNDGAGRGNGATYPSXXXXXX 1026 NGR CVVAFA+PQT+KQMGASYMNKTQ Q +Q Q RRPMNDG GRG Y Sbjct: 294 NGRPCVVAFASPQTLKQMGASYMNKTQGQPQTQNQARRPMNDGVGRGGNMNYQGGDAGRN 353 Query: 1025 XXXXXXXXXGQQL--XXXXXXXXXXXXXXXXGTKNMIXXXXXXXXXXXXXXXXXXXXXXX 852 GQ + G KNM+ Sbjct: 354 FGRGGWGRGGQGMMNRGPVGGGPVRGRGGTMGAKNMVGGGVGVGNGANGGGFGQGLAGPA 413 Query: 851 XXXXXXXXXXXXXXXXXGFDPAFMGRGAGYGGFSGPAFPGMLPPFQAVNPMGLPGVAPHV 672 GFDP +MGRGAGYGGF+GP FPGMLP F AVN MGL GVAPHV Sbjct: 414 FGGPVAGMMPPQNMMGGGFDPTYMGRGAGYGGFAGPGFPGMLPSFPAVNAMGLAGVAPHV 473 Query: 671 NPAFFXXXXXXXXXXXXXXXXXXGPHSGMWNDPNMXXXXXXXXXXXXXESSYGGEDNASE 492 NPAFF GP++GMW+D +M ESSYGG+D ASE Sbjct: 474 NPAFFGRGMAPNGMGMMGPSAMDGPNAGMWSDTSM-GGWGEEPGRRTRESSYGGDDGASE 532 Query: 491 YGYGEASLDKGVRPSAASREKERNSERDWSSNS---XXXXXXXXXXXXXXXXXXXXXXXX 321 YGYGE + +KG R SAASREKER ERDWS NS Sbjct: 533 YGYGEVNNEKGTRSSAASREKERAPERDWSGNSDRRHRDEREHDWDRSEREHREHRYREE 592 Query: 320 KDGYRDYRNKERDLGYEDDWDRGQ-XXXXXXXXRAVPEEDHRSRSRDADYGKRRRIPSE 147 KD YR++R +ERD GYEDDWDRGQ RAVPEED+R RSRDADYGKRRR+PS+ Sbjct: 593 KDSYREHRRRERDSGYEDDWDRGQSSSRSRSRSRAVPEEDYRPRSRDADYGKRRRLPSD 651 >ref|XP_012085551.1| PREDICTED: cleavage and polyadenylation specificity factor subunit 6-like [Jatropha curcas] gi|802723892|ref|XP_012085552.1| PREDICTED: cleavage and polyadenylation specificity factor subunit 6-like [Jatropha curcas] gi|802723894|ref|XP_012085553.1| PREDICTED: cleavage and polyadenylation specificity factor subunit 6-like [Jatropha curcas] gi|643714049|gb|KDP26714.1| hypothetical protein JCGZ_17872 [Jatropha curcas] Length = 656 Score = 556 bits (1432), Expect = e-155 Identities = 325/662 (49%), Positives = 385/662 (58%), Gaps = 19/662 (2%) Frame = -1 Query: 2075 VADEQLDYGDGEYG--QKMQYHQVGAIPALVEEEMIGEXXXXXXXXXXXXVGEGFLQLQQ 1902 +ADEQ+DY D EYG QKMQY GAIPAL EEEM GE VGE FLQ+ Q Sbjct: 1 MADEQIDYEDEEYGGNQKMQYQGSGAIPALAEEEM-GEDDEYDDLYNDVNVGENFLQMHQ 59 Query: 1901 AEAQMPAPGVGNGGSRAPKANVPDARNEARVLQEVNIPGVAKEQNYASSSIQFPEQKSGL 1722 ++ P VG+GG + NV +++ E Q + IP VA E Y+ FPE K Sbjct: 60 SQVPPPPTSVGSGGFQTQ--NVNESKVETGGSQGLKIPEVAVEGKYSDPGTHFPEPKDVP 117 Query: 1721 PADGRPEQIVDA-------SQRGRISEMTHKSQAGHLGFQGSVPMPQKIAADPINLSGKV 1563 PE A +Q+GR+ EMTH +QA ++GF GS +P I DP ++S K Sbjct: 118 MGVKGPEMGSVAYSDGSSIAQKGRVMEMTHDAQARNIGFHGSSSVPSNIGVDPSDMSRKT 177 Query: 1562 PGEPSPLPNPTVGSSRGVPEIPASRMNPSSNVNVNRMVDNENLIRPAVENGNTMLFVGEL 1383 EP+P+PN RG+P++P +++ S N++VNR NEN IRP VENG+T+LFVGEL Sbjct: 178 ANEPAPVPNTAATGPRGMPQLPGNQI--SINMDVNRPTVNENQIRPPVENGSTVLFVGEL 235 Query: 1382 HWWTTDAELETVLTQYGMVKEIKFFDERASGKSKGYCQVEFYDPAAASACKDGMNGYVFN 1203 HWWTTDAELE+VL+QYG VKEIKFFDERASGKSKG+CQVEFYD AAA+ACK+GMNG+VFN Sbjct: 236 HWWTTDAELESVLSQYGRVKEIKFFDERASGKSKGFCQVEFYDAAAAAACKEGMNGHVFN 295 Query: 1202 GRACVVAFATPQTIKQMGASYMNKTQAQAPSQPQGRRPMNDGAGRGNGATYPSXXXXXXX 1023 GR CVVAFA+PQT+KQMGASYMNKTQ Q+ +Q QGRRPMNDGAGRG+ Y Sbjct: 296 GRPCVVAFASPQTLKQMGASYMNKTQGQSQTQNQGRRPMNDGAGRGDNMNYQGGDAGRNF 355 Query: 1022 XXXXXXXXGQ-QLXXXXXXXXXXXXXXXXGTKNMIXXXXXXXXXXXXXXXXXXXXXXXXX 846 GQ + G KNMI Sbjct: 356 GRGGWGRGGQGMMNRGPGGGGPMRGRGAMGPKNMIGGAGGVGSGANGGGYGQGLVGPAFG 415 Query: 845 XXXXXXXXXXXXXXXGFDPAFMGRGAGYGGFSGPAFPGMLPPFQAVNPMGLPGVAPHVNP 666 GFDP +MGRGA YGGF+GP FPGMLP F AVN MGL GVAPHVNP Sbjct: 416 GLAGGMMPPQNMMGAGFDPTYMGRGAAYGGFAGPGFPGMLPSFPAVNAMGLAGVAPHVNP 475 Query: 665 AFFXXXXXXXXXXXXXXXXXXGPHSGMWNDPNMXXXXXXXXXXXXXESSYGGEDNASEYG 486 AFF GP++GMW+D +M ESSYGG+D ASEYG Sbjct: 476 AFFGRGMAPNGMGMMGPSGMDGPNAGMWSDTSM-SGWGEEPGRRTRESSYGGDDGASEYG 534 Query: 485 YGEASLDKGVRPSAASREKERNSERDWSSNS--------XXXXXXXXXXXXXXXXXXXXX 330 YGE + +KG R SAASREKER ERDWS NS Sbjct: 535 YGEVNNEKGARSSAASREKERVPERDWSGNSDRRHRDEREHEWDRSEREHREREHRDQRY 594 Query: 329 XXXKDGYRDYRNKERDLGYEDDWDRGQ-XXXXXXXXRAVPEEDHRSRSRDADYGKRRRIP 153 KD YR++R +ERD GYEDDWDRGQ RAVPEED+RSRSRDADYGKRRR+P Sbjct: 595 REEKDSYREHRQRERDSGYEDDWDRGQSSSKSRTRSRAVPEEDYRSRSRDADYGKRRRLP 654 Query: 152 SE 147 +E Sbjct: 655 AE 656 >ref|XP_007044904.1| RNA-binding family protein isoform 1 [Theobroma cacao] gi|590695496|ref|XP_007044905.1| RNA-binding family protein isoform 1 [Theobroma cacao] gi|590695500|ref|XP_007044906.1| RNA-binding family protein isoform 1 [Theobroma cacao] gi|508708839|gb|EOY00736.1| RNA-binding family protein isoform 1 [Theobroma cacao] gi|508708840|gb|EOY00737.1| RNA-binding family protein isoform 1 [Theobroma cacao] gi|508708841|gb|EOY00738.1| RNA-binding family protein isoform 1 [Theobroma cacao] Length = 652 Score = 554 bits (1427), Expect = e-154 Identities = 313/659 (47%), Positives = 383/659 (58%), Gaps = 13/659 (1%) Frame = -1 Query: 2084 MDPVADEQLDYGDGEYG--QKMQYHQVGAIPALVEEEMIGEXXXXXXXXXXXXVGEGFLQ 1911 MD +A+EQ+D+GD EYG QKMQY GAIPAL +EEM+GE VGEGFLQ Sbjct: 1 MDAMAEEQIDFGDEEYGGGQKMQYQGSGAIPALADEEMMGEDDEYDDLYNDVNVGEGFLQ 60 Query: 1910 LQQAEAQMPAPGVGNGGSRAPKANVPDARNEARVLQEVNIPGVAKEQNYASSSIQFPEQK 1731 LQ++EA + G+G+ G +A + P+ R EA Q +NIPGV+ + + + S ++PE K Sbjct: 61 LQRSEAPLQPGGLGSTGLKAQRNEAPEPRVEAGGSQGLNIPGVSVQGKHPNVSARYPE-K 119 Query: 1730 SGLPADGRPEQIVDA-------SQRGRISEMTHKSQAGHLGFQGSVPMPQKIAADPINLS 1572 PA RPE + + SQ+G ++E TH Q +LGFQG K+ DP + Sbjct: 120 EEQPAVNRPEMVSGSYPSGSSISQKGSVTEGTHDKQVKNLGFQGLTSASNKVGIDPSGVP 179 Query: 1571 GKVPGEPSPLPNPTVGSSRGVPEIPASRMNPSSNVNVNRMVDNENLIRPAVENGNTMLFV 1392 K+ +P+ N G +G P +P ++M NVN V NEN ++P +ENG TMLFV Sbjct: 180 QKIANDPAQSLNSGTGGPQGPPHVPPNQMG----TNVNHPVMNENQVQPPIENGPTMLFV 235 Query: 1391 GELHWWTTDAELETVLTQYGMVKEIKFFDERASGKSKGYCQVEFYDPAAASACKDGMNGY 1212 GELHWWTTDAELE+VL+QYG +KEIKFFDE+ASGKSKGYCQVEFYDP++A+ CK+GMNGY Sbjct: 236 GELHWWTTDAELESVLSQYGRLKEIKFFDEKASGKSKGYCQVEFYDPSSAAVCKEGMNGY 295 Query: 1211 VFNGRACVVAFATPQTIKQMGASYMNKTQAQAPSQPQGRRPMNDGAGRGNGATYPSXXXX 1032 +FNGRACVVAFA+PQT+KQMGASYMNK Q Q+ +QPQGRRP N+G GRG Y S Sbjct: 296 MFNGRACVVAFASPQTLKQMGASYMNKNQGQSQAQPQGRRP-NEGLGRGGNLNYQSGDAG 354 Query: 1031 XXXXXXXXXXXGQQLXXXXXXXXXXXXXXXXGTKNMIXXXXXXXXXXXXXXXXXXXXXXX 852 GQ G KNM+ Sbjct: 355 RNYGRGGWGRGGQGGVNRAGGGGLMRGRGGVGVKNMVGISAGVGNGANGAGAYGQGPGPA 414 Query: 851 XXXXXXXXXXXXXXXXXGFDPAFMGRGAGYGGFSGPAFPGMLPPFQAVNPMGLPGVAPHV 672 GFDP +M RG GYGGF GP FPGMLP F AVN MGL GVAPHV Sbjct: 415 FGGPAGGMMHPQGMMGAGFDPTYMVRGGGYGGFPGPGFPGMLPSFPAVNTMGLAGVAPHV 474 Query: 671 NPAFFXXXXXXXXXXXXXXXXXXGPHSGMWNDPNMXXXXXXXXXXXXXESSYGGEDNASE 492 NPAFF GPH+GMW D +M ESSYGGED ASE Sbjct: 475 NPAFFGRGMAPNGMGMMGASGMDGPHAGMWTDASMGGWGGDEHGRRTRESSYGGEDGASE 534 Query: 491 YGYGEASLDKGVRPSAASREKERNSERDWSSNS---XXXXXXXXXXXXXXXXXXXXXXXX 321 YGYG+A+ +KG R S ASREKER SER+WS NS Sbjct: 535 YGYGDANHEKG-RSSGASREKERVSEREWSGNSDRRHRDEKEQDWDRSEREHREHRYREE 593 Query: 320 KDGYRDYRNKERDLGYEDDWDRGQ-XXXXXXXXRAVPEEDHRSRSRDADYGKRRRIPSE 147 KD YR++R++ERDL Y+DDWDRGQ A+PEE+HRSRSRD DYGK+RR+PSE Sbjct: 594 KDSYREHRHRERDLDYDDDWDRGQSSSRSRRRSHAMPEEEHRSRSRDVDYGKKRRLPSE 652 >ref|XP_007044902.1| RNA-binding family protein isoform 1 [Theobroma cacao] gi|590695488|ref|XP_007044903.1| RNA-binding family protein isoform 1 [Theobroma cacao] gi|508708837|gb|EOY00734.1| RNA-binding family protein isoform 1 [Theobroma cacao] gi|508708838|gb|EOY00735.1| RNA-binding family protein isoform 1 [Theobroma cacao] Length = 653 Score = 541 bits (1394), Expect = e-151 Identities = 313/660 (47%), Positives = 379/660 (57%), Gaps = 14/660 (2%) Frame = -1 Query: 2084 MDPVADEQLDYGDGEYG--QKMQYHQVGAIPALVEEEMIGEXXXXXXXXXXXXVGEGFLQ 1911 MD +A+EQ+D+GD EYG QKMQY GAIPAL +EEM+GE VGEGFLQ Sbjct: 1 MDAMAEEQIDFGDEEYGGAQKMQYQGSGAIPALADEEMMGEDDEYDDLYNDVNVGEGFLQ 60 Query: 1910 LQQAEAQMPAPGVGNGGSRAPKANVPDARNEARVLQEVNIPGVAKEQNYASSSIQFPEQK 1731 LQ++EA G+G+ G +A K P+ R EA Q +NIPGV+ + + + + ++PEQ Sbjct: 61 LQRSEAPPQPGGMGSTGLQAQKNEAPEPRGEAGGSQGLNIPGVSVQGKHLNVTARYPEQ- 119 Query: 1730 SGLPADGRPEQI-------VDASQRGRISEMTHKSQAGHLGFQGSVPMPQKIAADPINLS 1572 G PA RPE SQ+GR+ E T +Q ++GFQG K+ DP + Sbjct: 120 DGQPAVSRPEMGSGSYPSGTSISQKGRVMEGTQDTQVKNMGFQGLSSASHKVGIDPSGVP 179 Query: 1571 GKVPGEPSPLPNPTVGSSRGVPEIPASRMNPSSNVNVNRMVDNENLIRPAVENGNTMLFV 1392 K+ P+ N G +G P +P ++M +NVN + +EN +RP +ENG TMLFV Sbjct: 180 QKIANVPAQSLNSGTGGPQGAPHVPPNQMG----LNVNHPMISENQVRPPIENGPTMLFV 235 Query: 1391 GELHWWTTDAELETVLTQYGMVKEIKFFDERASGKSKGYCQVEFYDPAAASACKDGMNGY 1212 GELHWWTTDAELE+VL+QYG VKEIKFFDERASGKSKGYCQVEFYDPA+A+ACK+GM+GY Sbjct: 236 GELHWWTTDAELESVLSQYGRVKEIKFFDERASGKSKGYCQVEFYDPASAAACKEGMDGY 295 Query: 1211 VFNGRACVVAFATPQTIKQMGASYMNKTQAQAPSQPQGRRPMNDGAGRGNGATYPSXXXX 1032 +FNGRACVVAFA+PQT+KQMGASYMNK Q Q+ +QPQGRRP NDG GRG Y S Sbjct: 296 MFNGRACVVAFASPQTLKQMGASYMNKNQGQSQAQPQGRRP-NDGLGRGGNMNYQSGDAG 354 Query: 1031 XXXXXXXXXXXGQQLXXXXXXXXXXXXXXXXGTKNMI-XXXXXXXXXXXXXXXXXXXXXX 855 GQ + G KNM+ Sbjct: 355 RNYGRGGWGRGGQGVVNRSGVGGPMRGRGGVGVKNMVGSSAGVGNGANGGAAYGQGPAGP 414 Query: 854 XXXXXXXXXXXXXXXXXXGFDPAFMGRGAGYGGFSGPAFPGMLPPFQAVNPMGLPGVAPH 675 GFDP +MGRG YGGF GP FPGMLP F AVN +GL GVAPH Sbjct: 415 PFGGPAGGMMHPQGMMGAGFDPTYMGRGGSYGGFPGPGFPGMLPSFPAVNTLGLAGVAPH 474 Query: 674 VNPAFFXXXXXXXXXXXXXXXXXXGPHSGMWNDPNMXXXXXXXXXXXXXESSYGGEDNAS 495 VNPAFF GPH GMW D +M ESSYGGED AS Sbjct: 475 VNPAFFGRGMAPNGMGMMGGPGMDGPHVGMWTDTSMGGWGGDEHGRRTRESSYGGEDGAS 534 Query: 494 EYGYGEASLDKGVRPSAASREKERNSERDWSSNS---XXXXXXXXXXXXXXXXXXXXXXX 324 EYGYG+A+ +KG R S ASREKER S+R+WS NS Sbjct: 535 EYGYGDANHEKG-RSSGASREKERVSDREWSGNSDRRHRDEKERDWDRSEREHREHRYRE 593 Query: 323 XKDGYRDYRNKERDLGYEDDWDRGQ-XXXXXXXXRAVPEEDHRSRSRDADYGKRRRIPSE 147 KD YR++R++ERDL Y+DD DRGQ A+PEE RSRSRD DYGKRRR+PSE Sbjct: 594 EKDSYREHRHRERDLDYDDDLDRGQSSSRSRRRSHAMPEEQRRSRSRDVDYGKRRRLPSE 653 >ref|XP_007044908.1| RNA-binding family protein isoform 5, partial [Theobroma cacao] gi|508708843|gb|EOY00740.1| RNA-binding family protein isoform 5, partial [Theobroma cacao] Length = 656 Score = 536 bits (1380), Expect = e-149 Identities = 305/654 (46%), Positives = 375/654 (57%), Gaps = 13/654 (1%) Frame = -1 Query: 2084 MDPVADEQLDYGDGEYG--QKMQYHQVGAIPALVEEEMIGEXXXXXXXXXXXXVGEGFLQ 1911 MD +A+EQ+D+GD EYG QKMQY GAIPAL +EEM+GE VGEGFLQ Sbjct: 1 MDAMAEEQIDFGDEEYGGGQKMQYQGSGAIPALADEEMMGEDDEYDDLYNDVNVGEGFLQ 60 Query: 1910 LQQAEAQMPAPGVGNGGSRAPKANVPDARNEARVLQEVNIPGVAKEQNYASSSIQFPEQK 1731 LQ++EA + G+G+ G +A + P+ R EA Q +NIPGV+ + + + S ++PE K Sbjct: 61 LQRSEAPLQPGGLGSTGLKAQRNEAPEPRVEAGGSQGLNIPGVSVQGKHPNVSARYPE-K 119 Query: 1730 SGLPADGRPEQIVDA-------SQRGRISEMTHKSQAGHLGFQGSVPMPQKIAADPINLS 1572 PA RPE + + SQ+G ++E TH Q +LGFQG K+ DP + Sbjct: 120 EEQPAVNRPEMVSGSYPSGSSISQKGSVTEGTHDKQVKNLGFQGLTSASNKVGIDPSGVP 179 Query: 1571 GKVPGEPSPLPNPTVGSSRGVPEIPASRMNPSSNVNVNRMVDNENLIRPAVENGNTMLFV 1392 K+ +P+ N G +G P +P ++M NVN V NEN ++P +ENG TMLFV Sbjct: 180 QKIANDPAQSLNSGTGGPQGPPHVPPNQMG----TNVNHPVMNENQVQPPIENGPTMLFV 235 Query: 1391 GELHWWTTDAELETVLTQYGMVKEIKFFDERASGKSKGYCQVEFYDPAAASACKDGMNGY 1212 GELHWWTTDAELE+VL+QYG +KEIKFFDE+ASGKSKGYCQVEFYDP++A+ CK+GMNGY Sbjct: 236 GELHWWTTDAELESVLSQYGRLKEIKFFDEKASGKSKGYCQVEFYDPSSAAVCKEGMNGY 295 Query: 1211 VFNGRACVVAFATPQTIKQMGASYMNKTQAQAPSQPQGRRPMNDGAGRGNGATYPSXXXX 1032 +FNGRACVVAFA+PQT+KQMGASYMNK Q Q+ +QPQGRRP N+G GRG Y S Sbjct: 296 MFNGRACVVAFASPQTLKQMGASYMNKNQGQSQAQPQGRRP-NEGLGRGGNLNYQSGDAG 354 Query: 1031 XXXXXXXXXXXGQQLXXXXXXXXXXXXXXXXGTKNMIXXXXXXXXXXXXXXXXXXXXXXX 852 GQ G KNM+ Sbjct: 355 RNYGRGGWGRGGQGGVNRAGGGGLMRGRGGVGVKNMVGISAGVGNGANGAGAYGQGPGPA 414 Query: 851 XXXXXXXXXXXXXXXXXGFDPAFMGRGAGYGGFSGPAFPGMLPPFQAVNPMGLPGVAPHV 672 GFDP +M RG GYGGF GP FPGMLP F AVN MGL GVAPHV Sbjct: 415 FGGPAGGMMHPQGMMGAGFDPTYMVRGGGYGGFPGPGFPGMLPSFPAVNTMGLAGVAPHV 474 Query: 671 NPAFFXXXXXXXXXXXXXXXXXXGPHSGMWNDPNMXXXXXXXXXXXXXESSYGGEDNASE 492 NPAFF GPH+GMW D +M ESSYGGED ASE Sbjct: 475 NPAFFGRGMAPNGMGMMGASGMDGPHAGMWTDASMGGWGGDEHGRRTRESSYGGEDGASE 534 Query: 491 YGYGEASLDKGVRPSAASREKERNSERDWSSNS---XXXXXXXXXXXXXXXXXXXXXXXX 321 YGYG+A+ +KG R S ASREKER SER+WS NS Sbjct: 535 YGYGDANHEKG-RSSGASREKERVSEREWSGNSDRRHRDEKEQDWDRSEREHREHRYREE 593 Query: 320 KDGYRDYRNKERDLGYEDDWDRGQ-XXXXXXXXRAVPEEDHRSRSRDADYGKRR 162 KD YR++R++ERDL Y+DDWDRGQ A+PEE+HRSRSRD Y + + Sbjct: 594 KDSYREHRHRERDLDYDDDWDRGQSSSRSRRRSHAMPEEEHRSRSRDVGYREEK 647 >ref|XP_007044907.1| RNA-binding family protein isoform 4 [Theobroma cacao] gi|508708842|gb|EOY00739.1| RNA-binding family protein isoform 4 [Theobroma cacao] Length = 697 Score = 525 bits (1351), Expect = e-146 Identities = 312/704 (44%), Positives = 380/704 (53%), Gaps = 58/704 (8%) Frame = -1 Query: 2084 MDPVADEQLDYGDGEYG--QKMQYHQVGAIPALVEEEMIGEXXXXXXXXXXXXVGEGFLQ 1911 MD +A+EQ+D+GD EYG QKMQY GAIPAL +EEM+GE VGEGFLQ Sbjct: 1 MDAMAEEQIDFGDEEYGGGQKMQYQGSGAIPALADEEMMGEDDEYDDLYNDVNVGEGFLQ 60 Query: 1910 LQQAEAQMPAPGVGNGGSRAPKANVPDARNEARVLQEVNIPGVAKEQNYASSSIQFPEQK 1731 LQ++EA + G+G+ G +A + P+ R EA Q +NIPGV+ + + + S ++PE K Sbjct: 61 LQRSEAPLQPGGLGSTGLKAQRNEAPEPRVEAGGSQGLNIPGVSVQGKHPNVSARYPE-K 119 Query: 1730 SGLPADGRPEQIVDA-------SQRGRISEMTHKSQAGHLGFQGSVPMPQKIAADPINLS 1572 PA RPE + + SQ+G ++E TH Q +LGFQG K+ DP + Sbjct: 120 EEQPAVNRPEMVSGSYPSGSSISQKGSVTEGTHDKQVKNLGFQGLTSASNKVGIDPSGVP 179 Query: 1571 GKVPGEPSPLPNPTVGSSRGVPEIPASRMNPSSNVNVNRMVDNENLIRPAVENGNTMLFV 1392 K+ +P+ N G +G P +P ++M NVN V NEN ++P +ENG TMLFV Sbjct: 180 QKIANDPAQSLNSGTGGPQGPPHVPPNQMG----TNVNHPVMNENQVQPPIENGPTMLFV 235 Query: 1391 GELHWWTTDAELETVLTQYGMVKEIKFFDERASGKSKGYCQVEFYDPAAASACKDGMNGY 1212 GELHWWTTDAELE+VL+QYG +KEIKFFDE+ASGKSKGYCQVEFYDP++A+ CK+GMNGY Sbjct: 236 GELHWWTTDAELESVLSQYGRLKEIKFFDEKASGKSKGYCQVEFYDPSSAAVCKEGMNGY 295 Query: 1211 VFNGRACVVAFATPQTIKQMGASYMNKTQAQAPSQPQGRRPMNDGAGRGNGATYPSXXXX 1032 +FNGRACVVAFA+PQT+KQMGASYMNK Q Q+ +QPQGRRP N+G GRG Y S Sbjct: 296 MFNGRACVVAFASPQTLKQMGASYMNKNQGQSQAQPQGRRP-NEGLGRGGNLNYQSGDAG 354 Query: 1031 XXXXXXXXXXXGQQLXXXXXXXXXXXXXXXXGTKNMIXXXXXXXXXXXXXXXXXXXXXXX 852 GQ G KNM+ Sbjct: 355 RNYGRGGWGRGGQGGVNRAGGGGLMRGRGGVGVKNMVGISAGVGNGANGAGAYGQGPGPA 414 Query: 851 XXXXXXXXXXXXXXXXXGFDPAFMGRGAGYGGFSGPAFPGMLPPFQAVNPMGLPGVAPHV 672 GFDP +M RG GYGGF GP FPGMLP F AVN MGL GVAPHV Sbjct: 415 FGGPAGGMMHPQGMMGAGFDPTYMVRGGGYGGFPGPGFPGMLPSFPAVNTMGLAGVAPHV 474 Query: 671 NPAFFXXXXXXXXXXXXXXXXXXGPHSGMWNDPNMXXXXXXXXXXXXXESSYGGEDNASE 492 NPAFF GPH+GMW D +M ESSYGGED ASE Sbjct: 475 NPAFFGRGMAPNGMGMMGASGMDGPHAGMWTDASMGGWGGDEHGRRTRESSYGGEDGASE 534 Query: 491 YGYGEASLDKGVRPSAASREKERNSERDWSSNS---XXXXXXXXXXXXXXXXXXXXXXXX 321 YGYG+A+ +KG R S ASREKER SER+WS NS Sbjct: 535 YGYGDANHEKG-RSSGASREKERVSEREWSGNSDRRHRDEKEQDWDRSEREHREHRYREE 593 Query: 320 KDGYRDYRNKE---------------------------------------------RDLG 276 KD YR++R++E RDL Sbjct: 594 KDSYREHRHREREWSGNSDRRHRDEKERDWDRSEREHREHRYREEKDSYREHRHRERDLD 653 Query: 275 YEDDWDRGQ-XXXXXXXXRAVPEEDHRSRSRDADYGKRRRIPSE 147 Y+DD DRGQ A+PEE RSRSRD DYGKRRR+PSE Sbjct: 654 YDDDLDRGQSSSRSRRRSHAMPEEQRRSRSRDVDYGKRRRLPSE 697 >ref|XP_011457426.1| PREDICTED: cleavage and polyadenylation specificity factor subunit 6-like [Fragaria vesca subsp. vesca] Length = 619 Score = 504 bits (1298), Expect = e-139 Identities = 290/645 (44%), Positives = 362/645 (56%), Gaps = 7/645 (1%) Frame = -1 Query: 2075 VADEQLDYGDGEYG--QKMQYHQVGAIPALVEEEMIGEXXXXXXXXXXXXVGEGFLQLQQ 1902 +A+EQ+++ + EYG QK+QY GAI AL +EE++ E VGEGFLQ+ + Sbjct: 1 MAEEQINFEEEEYGAAQKLQYQGSGAISALADEELMVEDDEYDDLYDDVNVGEGFLQMHR 60 Query: 1901 AEAQMPAPGVGNGGSRAPKANVPDARNEARVLQEVNIPGVAKEQNYASSSIQFPEQKSGL 1722 +EA A VGNGG +A K P+ R +A QE+ IPGV+ NY++ PEQK Sbjct: 61 SEAPAGAGSVGNGGPQAQKTVAPELRVQAGASQEMKIPGVSVGGNYST----VPEQKVQP 116 Query: 1721 PADGRPEQIVDASQRGRISEMTHKSQAGHLGFQGSVPMPQKIAADPINLSGKVPGEPSPL 1542 P PE +Q H+GFQGS +P + D + ++GK EP Sbjct: 117 PVANVPE-----------------TQVRHMGFQGSTTIPSNVGVDSLEVTGKFANEPLQS 159 Query: 1541 PNPTVGSSRGVPEIPASRMNPSSNVNVNRMVDNENLIRPAVENGNTMLFVGELHWWTTDA 1362 N V ++PA++MN VN+NR + N+N IRP VENG+ LFVG+LHWWTTDA Sbjct: 160 MNSGTTGPSAVAQVPANQMN--MKVNLNRPMVNDNQIRPPVENGSATLFVGDLHWWTTDA 217 Query: 1361 ELETVLTQYGMVKEIKFFDERASGKSKGYCQVEFYDPAAASACKDGMNGYVFNGRACVVA 1182 ELE+VL+Q+G VKEIKFFDERASGKSKGYCQV+FYDPAAASACK+GM+GYVFNGRACVVA Sbjct: 218 ELESVLSQFGRVKEIKFFDERASGKSKGYCQVDFYDPAAASACKEGMDGYVFNGRACVVA 277 Query: 1181 FATPQTIKQMGASYMNKTQAQAPSQPQGRRPMNDGAGRGNGATYPSXXXXXXXXXXXXXX 1002 FA+ QT+KQMGA+Y+NK+Q Q +QPQGRRPMNDGAGRG G + Sbjct: 278 FASSQTLKQMGANYVNKSQGQVQTQPQGRRPMNDGAGRGGGMNFQGGDTGRNFGRGNWGR 337 Query: 1001 XGQQLXXXXXXXXXXXXXXXXGTKNMIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 822 GQ + G +NM+ Sbjct: 338 GGQGVPNRGPGGPGRGRGGAMGARNMVGNNAGVGTGGNGGGYGQGLAGPGFGGPVGGMMN 397 Query: 821 XXXXXXXGFDPAFMGRGAGYGGFSGPAFPGMLPPFQAVNPMGLPGVAPHVNPAFFXXXXX 642 GFDP +MGRG GYGGF GP FPGMLP F MGL GVAPHVNPAFF Sbjct: 398 APGMMGPGFDPTYMGRGGGYGGFPGPGFPGMLPQFPG---MGLAGVAPHVNPAFFGRGMA 454 Query: 641 XXXXXXXXXXXXXGPHSGMWNDPNMXXXXXXXXXXXXXESSYGGEDNASEYG-YGEASLD 465 G H+ MWNDP+M ESSYGG+D SEYG Y EA+L+ Sbjct: 455 TSGMGMMGSSGMEGHHAPMWNDPSMAGWGGEEQDQRTRESSYGGDDGGSEYGNYVEANLE 514 Query: 464 KGVRPSAASREKERNSERDWSSNS---XXXXXXXXXXXXXXXXXXXXXXXXKDGYRDYRN 294 K + SA SR++ER SER+W+ +S KD +R++R Sbjct: 515 KSAKSSAVSRDRERGSEREWTGSSERRHRDEREQDFDRSEREHKEPRYKEEKDSHREHRR 574 Query: 293 KERDLGYEDDWDRGQ-XXXXXXXXRAVPEEDHRSRSRDADYGKRR 162 +ERD+GY+DDWDRGQ +AVPE+DHRSRSRD DYGKRR Sbjct: 575 RERDVGYDDDWDRGQSSSRPRSRSKAVPEDDHRSRSRDVDYGKRR 619 >ref|XP_002312652.1| RNA recognition motif-containing family protein [Populus trichocarpa] gi|222852472|gb|EEE90019.1| RNA recognition motif-containing family protein [Populus trichocarpa] Length = 619 Score = 501 bits (1291), Expect = e-139 Identities = 299/641 (46%), Positives = 355/641 (55%), Gaps = 7/641 (1%) Frame = -1 Query: 2048 DGEYGQKMQYHQVGAIPALVEEEMIGEXXXXXXXXXXXXVGEGFLQLQQAEAQMPAPGVG 1869 D E +KMQY GAIPAL EEEM GE VGE FLQ+ +EA P VG Sbjct: 2 DYEEEEKMQYQGSGAIPALAEEEM-GEDDEYDDLYNDVNVGENFLQMHGSEAPAPPATVG 60 Query: 1868 NGGSRAPKANVPDARNEARVLQEVNIPG--VAKEQNYASSSIQFPEQKSGLPA----DGR 1707 NGG + A+ ++R E Q + I G A E Y+++ FPEQK A D Sbjct: 61 NGGFQTRNAH--ESRIETGGSQALAITGGGPAVEGIYSNAKAHFPEQKQVAVAVEAQDVG 118 Query: 1706 PEQIVDASQRGRISEMTHKSQAGHLGFQGSVPMPQKIAADPINLSGKVPGEPSPLPNPTV 1527 P +Q+GR+ EM+H Q ++GFQ S P+P I DP ++S K EP PLP Sbjct: 119 PVDGSSVAQKGRVIEMSHDVQVRNMGFQKSTPVPPGIGVDPSDMSRKNAIEPEPLPITGS 178 Query: 1526 GSSRGVPEIPASRMNPSSNVNVNRMVDNENLIRPAVENGNTMLFVGELHWWTTDAELETV 1347 RG P++ ++M+ S++VN R V NEN +RP +ENG+T L+VGELHWWTTDAELE+ Sbjct: 179 AGPRGAPQMQVNQMHMSADVN--RPVVNENQVRPPIENGSTTLYVGELHWWTTDAELESF 236 Query: 1346 LTQYGMVKEIKFFDERASGKSKGYCQVEFYDPAAASACKDGMNGYVFNGRACVVAFATPQ 1167 +Q+G VKEIKFFDERASGKSKGYCQV+FY+ AAA+ACK+GMNG+VFNGR CVVAFA+PQ Sbjct: 237 ASQFGRVKEIKFFDERASGKSKGYCQVDFYEAAAAAACKEGMNGHVFNGRPCVVAFASPQ 296 Query: 1166 TIKQMGASYMNKTQAQAPSQPQGRRPMNDGAGRGNGATYPSXXXXXXXXXXXXXXXGQQL 987 T+KQMGASYMNKTQ Q +Q QGR MNDGAGRG A + S GQ + Sbjct: 297 TLKQMGASYMNKTQGQPQTQSQGRGSMNDGAGRGGNANFQSGDGGRNYGRGAWGRGGQGI 356 Query: 986 XXXXXXXXXXXXXXXXGTKNMIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 807 G KNM Sbjct: 357 LNRGPGGGPMRGRGAMGPKNMAGNVAGVGSGANGGGYGQGLAGPAFGGPAGGMMPPQGMM 416 Query: 806 XXGFDPAFMGRGAGYGGFSGPAFPGMLPPFQAVNPMGLPGVAPHVNPAFFXXXXXXXXXX 627 GFDP +MGRG GYGGF+GP FPGMLP F AVN MGL GVAPHVNPAFF Sbjct: 417 GAGFDPLYMGRGGGYGGFAGPGFPGMLPSFPAVNSMGLAGVAPHVNPAFFARGMAPNGMG 476 Query: 626 XXXXXXXXGPHSGMWNDPNMXXXXXXXXXXXXXESSYGGEDNASEYGYGEASLDKGVRPS 447 GP+ GMW SSY G++ ASEYGYGE + +KG R S Sbjct: 477 MMVSSGMDGPNPGMWE------------------SSYDGDEGASEYGYGEGNHEKGARSS 518 Query: 446 AASREKERNSERDWSSNSXXXXXXXXXXXXXXXXXXXXXXXXKDGYRDYRNKERDLGYED 267 ASREKER SERDWS NS KD YR +R +ERD GYED Sbjct: 519 GASREKERGSERDWSGNSDRRHRDEREQDWDRPEREHRYKEEKDSYRGHRQRERDSGYED 578 Query: 266 DWDRG-QXXXXXXXXRAVPEEDHRSRSRDADYGKRRRIPSE 147 D DRG RA PEED+RSR+RD DYGKRRR+PSE Sbjct: 579 DRDRGHSSSRARSRSRAAPEEDYRSRTRDVDYGKRRRLPSE 619 >ref|XP_007044909.1| RNA-binding family protein isoform 6 [Theobroma cacao] gi|508708844|gb|EOY00741.1| RNA-binding family protein isoform 6 [Theobroma cacao] Length = 602 Score = 493 bits (1269), Expect = e-136 Identities = 276/573 (48%), Positives = 337/573 (58%), Gaps = 9/573 (1%) Frame = -1 Query: 2084 MDPVADEQLDYGDGEYG--QKMQYHQVGAIPALVEEEMIGEXXXXXXXXXXXXVGEGFLQ 1911 MD +A+EQ+D+GD EYG QKMQY GAIPAL +EEM+GE VGEGFLQ Sbjct: 1 MDAMAEEQIDFGDEEYGGGQKMQYQGSGAIPALADEEMMGEDDEYDDLYNDVNVGEGFLQ 60 Query: 1910 LQQAEAQMPAPGVGNGGSRAPKANVPDARNEARVLQEVNIPGVAKEQNYASSSIQFPEQK 1731 LQ++EA + G+G+ G +A + P+ R EA Q +NIPGV+ + + + S ++PE K Sbjct: 61 LQRSEAPLQPGGLGSTGLKAQRNEAPEPRVEAGGSQGLNIPGVSVQGKHPNVSARYPE-K 119 Query: 1730 SGLPADGRPEQIVDA-------SQRGRISEMTHKSQAGHLGFQGSVPMPQKIAADPINLS 1572 PA RPE + + SQ+G ++E TH Q +LGFQG K+ DP + Sbjct: 120 EEQPAVNRPEMVSGSYPSGSSISQKGSVTEGTHDKQVKNLGFQGLTSASNKVGIDPSGVP 179 Query: 1571 GKVPGEPSPLPNPTVGSSRGVPEIPASRMNPSSNVNVNRMVDNENLIRPAVENGNTMLFV 1392 K+ +P+ N G +G P +P ++M NVN V NEN ++P +ENG TMLFV Sbjct: 180 QKIANDPAQSLNSGTGGPQGPPHVPPNQMG----TNVNHPVMNENQVQPPIENGPTMLFV 235 Query: 1391 GELHWWTTDAELETVLTQYGMVKEIKFFDERASGKSKGYCQVEFYDPAAASACKDGMNGY 1212 GELHWWTTDAELE+VL+QYG +KEIKFFDE+ASGKSKGYCQVEFYDP++A+ CK+GMNGY Sbjct: 236 GELHWWTTDAELESVLSQYGRLKEIKFFDEKASGKSKGYCQVEFYDPSSAAVCKEGMNGY 295 Query: 1211 VFNGRACVVAFATPQTIKQMGASYMNKTQAQAPSQPQGRRPMNDGAGRGNGATYPSXXXX 1032 +FNGRACVVAFA+PQT+KQMGASYMNK Q Q+ +QPQGRRP N+G GRG Y S Sbjct: 296 MFNGRACVVAFASPQTLKQMGASYMNKNQGQSQAQPQGRRP-NEGLGRGGNLNYQSGDAG 354 Query: 1031 XXXXXXXXXXXGQQLXXXXXXXXXXXXXXXXGTKNMIXXXXXXXXXXXXXXXXXXXXXXX 852 GQ G KNM+ Sbjct: 355 RNYGRGGWGRGGQGGVNRAGGGGLMRGRGGVGVKNMVGISAGVGNGANGAGAYGQGPGPA 414 Query: 851 XXXXXXXXXXXXXXXXXGFDPAFMGRGAGYGGFSGPAFPGMLPPFQAVNPMGLPGVAPHV 672 GFDP +M RG GYGGF GP FPGMLP F AVN MGL GVAPHV Sbjct: 415 FGGPAGGMMHPQGMMGAGFDPTYMVRGGGYGGFPGPGFPGMLPSFPAVNTMGLAGVAPHV 474 Query: 671 NPAFFXXXXXXXXXXXXXXXXXXGPHSGMWNDPNMXXXXXXXXXXXXXESSYGGEDNASE 492 NPAFF GPH+GMW D +M ESSYGGED ASE Sbjct: 475 NPAFFGRGMAPNGMGMMGASGMDGPHAGMWTDASMGGWGGDEHGRRTRESSYGGEDGASE 534 Query: 491 YGYGEASLDKGVRPSAASREKERNSERDWSSNS 393 YGYG+A+ +KG R S ASREKER SER+WS NS Sbjct: 535 YGYGDANHEKG-RSSGASREKERVSEREWSGNS 566 >ref|XP_011042356.1| PREDICTED: cleavage and polyadenylation specificity factor subunit 6-like [Populus euphratica] gi|743898139|ref|XP_011042357.1| PREDICTED: cleavage and polyadenylation specificity factor subunit 6-like [Populus euphratica] gi|743898141|ref|XP_011042358.1| PREDICTED: cleavage and polyadenylation specificity factor subunit 6-like [Populus euphratica] Length = 639 Score = 488 bits (1256), Expect = e-135 Identities = 295/647 (45%), Positives = 346/647 (53%), Gaps = 13/647 (2%) Frame = -1 Query: 2048 DGEYGQKMQYHQVGAIPALVEEEMIGEXXXXXXXXXXXXVGEGFLQLQQAEAQMPAPGVG 1869 D E +KMQY GAIPALVEEE+ GE VGE FLQ+ +EA P G Sbjct: 2 DYEEEEKMQYQGSGAIPALVEEEL-GEDDEYDDLYNDVNVGENFLQMHGSEAPAPPATAG 60 Query: 1868 NGGSRAPKANVPDARNEARVLQEVNIPGVAKEQNYASSSIQFPEQKS---GLPA------ 1716 NGG + A+ + ++ GVA E Y+++ FPEQK G+ A Sbjct: 61 NGGFQTRNAHESRVETGGSQVLTISGAGVAVEGKYSNAGAPFPEQKQAAIGVEANDVGSI 120 Query: 1715 ---DGRPEQIVDASQRGRISEMTHKSQAGHLGFQGSVPMPQKIAADPINLSGKVPGEPSP 1545 DG +Q+GR EM H ++GFQ +P DP ++S K+ EP Sbjct: 121 GYGDGS-----SVAQKGRFIEMGHDVHVRNMGFQKPASVPPGTGVDPSDMSRKIAKEPET 175 Query: 1544 LPNPTVGSSRGVPEIPASRMNPSSNVNVNRMVDNENLIRPAVENGNTMLFVGELHWWTTD 1365 LPN RGVP++ ++MN N + NR V NEN +RP +ENG T L+VGELHWWTTD Sbjct: 176 LPNTGSSGPRGVPQMQVNQMN--MNADANRPVVNENQVRPPIENGPTTLYVGELHWWTTD 233 Query: 1364 AELETVLTQYGMVKEIKFFDERASGKSKGYCQVEFYDPAAASACKDGMNGYVFNGRACVV 1185 AELE+V +QYG VKEIKFFDERASGKSKGYCQV+FY+ AAA+ACK+GMN +VFNGR CVV Sbjct: 234 AELESVASQYGRVKEIKFFDERASGKSKGYCQVDFYEAAAAAACKEGMNEHVFNGRPCVV 293 Query: 1184 AFATPQTIKQMGASYMNKTQAQAPSQPQGRRPMNDGAGRGNGATYPSXXXXXXXXXXXXX 1005 AFA+ QT+KQMGASYM+KTQ Q Q QGR MNDG GRG A Y S Sbjct: 294 AFASAQTLKQMGASYMSKTQGQPQPQSQGRGSMNDGMGRGGNANYQSGDGGRNYGRGGWG 353 Query: 1004 XXGQQLXXXXXXXXXXXXXXXXGTKNMIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 825 GQ + G KNM Sbjct: 354 RGGQGVLNRGPGGGPMRGRGGMGPKNMAGNVAGVGSGANGGGYGQGIAGPAFGGPAGGMM 413 Query: 824 XXXXXXXXGFDPAFMGRGAGYGGFSGPAFPGMLPPFQAVNPMGLPGVAPHVNPAFFXXXX 645 GFDP +MGRG GYGGF+GP FPGMLP F AVN MGL GVAPHVNPAFF Sbjct: 414 HHQGMMGAGFDPLYMGRGGGYGGFAGPGFPGMLPSFPAVNSMGLAGVAPHVNPAFFARGM 473 Query: 644 XXXXXXXXXXXXXXGPHSGMWNDPNMXXXXXXXXXXXXXESSYGGEDNASEYGYGEASLD 465 GP+ G W D +M ESSY G++ ASEYGYGE + + Sbjct: 474 APNGMGMMASSGMEGPNPGKWPDTSM-GGWGEEPGRRTRESSYDGDEGASEYGYGEGNHE 532 Query: 464 KGVRPSAASREKERNSERDWSSNSXXXXXXXXXXXXXXXXXXXXXXXXKDGYRDYRNKER 285 KG R S ASREKER SERDWS NS KD YR +R +ER Sbjct: 533 KGARSSGASREKERVSERDWSGNSDRRHRDEREQDWDRSEREHKYREEKDTYRGHRQRER 592 Query: 284 DLGYEDDWDRG-QXXXXXXXXRAVPEEDHRSRSRDADYGKRRRIPSE 147 D GYEDD DRG RA PEED+RSRSRD DYGKRRR PSE Sbjct: 593 DSGYEDDRDRGHSSSRARSRSRAAPEEDYRSRSRDVDYGKRRRPPSE 639 >ref|XP_006378268.1| hypothetical protein POPTR_0010s06150g [Populus trichocarpa] gi|550329195|gb|ERP56065.1| hypothetical protein POPTR_0010s06150g [Populus trichocarpa] Length = 591 Score = 444 bits (1142), Expect = e-121 Identities = 278/636 (43%), Positives = 326/636 (51%), Gaps = 2/636 (0%) Frame = -1 Query: 2048 DGEYGQKMQYHQVGAIPALVEEEMIGEXXXXXXXXXXXXVGEGFLQLQQAEAQMPAPGVG 1869 D E +KMQY GAIPAL EEE+ GE VGE FLQ+ +EA P G Sbjct: 2 DFEEEEKMQYQGSGAIPALAEEEL-GEDDEYDDLYNDVNVGENFLQMHGSEAPAPPATAG 60 Query: 1868 NGGSRAPKANVPDARNEARVLQEVNIPGVAKEQNYASSSIQFPEQK-SGLPADGRPEQIV 1692 NGG + A+ + + GVA E Y+++ FPEQK +G+ + Sbjct: 61 NGGFQTRNAHESRVETGGSQVLATSGAGVAVEGKYSNAGAHFPEQKQAGIGVEA------ 114 Query: 1691 DASQRGRISEMTHKSQAGHLGFQGSVPMPQKIAADPINLSGKVPGEPSPLPNPTVGSSRG 1512 + G +G+ + QK +A P RG Sbjct: 115 --------------NDVGSIGYGDGSSVAQKGSAGP----------------------RG 138 Query: 1511 VPEIPASRMNPSSNVNVNRMVDNENLIRPAVENGNTMLFVGELHWWTTDAELETVLTQYG 1332 VP++ ++MN N +VNR V NEN +RP +ENG T L+VGELHWWTTDAELE+V +QYG Sbjct: 139 VPQMQVNQMN--MNADVNRPVVNENQVRPPIENGPTTLYVGELHWWTTDAELESVASQYG 196 Query: 1331 MVKEIKFFDERASGKSKGYCQVEFYDPAAASACKDGMNGYVFNGRACVVAFATPQTIKQM 1152 VKEIKFFDERASGKSKGYCQV+FY+ AAA+ACK+GMN +VFNGR CVVAFA+ QT+KQM Sbjct: 197 RVKEIKFFDERASGKSKGYCQVDFYEAAAAAACKEGMNEHVFNGRPCVVAFASAQTLKQM 256 Query: 1151 GASYMNKTQAQAPSQPQGRRPMNDGAGRGNGATYPSXXXXXXXXXXXXXXXGQQLXXXXX 972 GASYM+KTQ Q Q QGR MNDG GRG A Y S GQ + Sbjct: 257 GASYMSKTQGQPQPQSQGRGSMNDGMGRGGNANYQSGDGGRNYGRGGWGRGGQGVLNRGP 316 Query: 971 XXXXXXXXXXXGTKNMIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGFD 792 G KNM GFD Sbjct: 317 GGGPMRGRGGMGPKNMAGNVAGVGSGANGGGYGQGIAGPAFGGPAGGMMHHQGMMGAGFD 376 Query: 791 PAFMGRGAGYGGFSGPAFPGMLPPFQAVNPMGLPGVAPHVNPAFFXXXXXXXXXXXXXXX 612 P +MGRG GYGGF G FPGMLP F AVN MGL GVAPHVNPAFF Sbjct: 377 PLYMGRGGGYGGFPGHGFPGMLPSFPAVNSMGLAGVAPHVNPAFFARGMAPNGMGMMASS 436 Query: 611 XXXGPHSGMWNDPNMXXXXXXXXXXXXXESSYGGEDNASEYGYGEASLDKGVRPSAASRE 432 GP+ G W D +M ESSY G++ ASEYGYGE + +KG R S ASRE Sbjct: 437 GMEGPNPGKWPDTSM-GGWGEEPGRRTRESSYDGDEGASEYGYGEGNHEKGARSSGASRE 495 Query: 431 KERNSERDWSSNSXXXXXXXXXXXXXXXXXXXXXXXXKDGYRDYRNKERDLGYEDDWDRG 252 KER SERDWS NS KD YR +R +ERD GYEDD DRG Sbjct: 496 KERVSERDWSGNSDRRHRDEREQDWDRSEREPKYREEKDTYRGHRQRERDSGYEDDRDRG 555 Query: 251 -QXXXXXXXXRAVPEEDHRSRSRDADYGKRRRIPSE 147 RA PEED+RSRSRD DYGKRRR PSE Sbjct: 556 HSSSRARSRSRAAPEEDYRSRSRDVDYGKRRRPPSE 591 >ref|XP_002315647.1| RNA recognition motif-containing family protein [Populus trichocarpa] gi|222864687|gb|EEF01818.1| RNA recognition motif-containing family protein [Populus trichocarpa] Length = 573 Score = 434 bits (1116), Expect = e-118 Identities = 275/636 (43%), Positives = 322/636 (50%), Gaps = 2/636 (0%) Frame = -1 Query: 2048 DGEYGQKMQYHQVGAIPALVEEEMIGEXXXXXXXXXXXXVGEGFLQLQQAEAQMPAPGVG 1869 D E +KMQY GAIPAL EEE+ GE VGE FLQ+ +EA P G Sbjct: 2 DFEEEEKMQYQGSGAIPALAEEEL-GEDDEYDDLYNDVNVGENFLQMHGSEAPAPPATAG 60 Query: 1868 NGGSRAPKANVPDARNEARVLQEVNIPGVAKEQNYASSSIQFPEQK-SGLPADGRPEQIV 1692 NGG + A+ + + GVA E Y+++ FPEQK +G+ + Sbjct: 61 NGGFQTRNAHESRVETGGSQVLATSGAGVAVEGKYSNAGAHFPEQKQAGIGVEA------ 114 Query: 1691 DASQRGRISEMTHKSQAGHLGFQGSVPMPQKIAADPINLSGKVPGEPSPLPNPTVGSSRG 1512 + G +G+ + QK +A P RG Sbjct: 115 --------------NDVGSIGYGDGSSVAQKGSAGP----------------------RG 138 Query: 1511 VPEIPASRMNPSSNVNVNRMVDNENLIRPAVENGNTMLFVGELHWWTTDAELETVLTQYG 1332 VP++ ++MN N +VNR V NEN +RP +ENG T L+VGELHWWTTDAELE+V +QYG Sbjct: 139 VPQMQVNQMN--MNADVNRPVVNENQVRPPIENGPTTLYVGELHWWTTDAELESVASQYG 196 Query: 1331 MVKEIKFFDERASGKSKGYCQVEFYDPAAASACKDGMNGYVFNGRACVVAFATPQTIKQM 1152 VKEIKFFDERASGKSKGYCQV+FY+ AAA+ACK+GMN +VFNGR CVVAFA+ QT+KQM Sbjct: 197 RVKEIKFFDERASGKSKGYCQVDFYEAAAAAACKEGMNEHVFNGRPCVVAFASAQTLKQM 256 Query: 1151 GASYMNKTQAQAPSQPQGRRPMNDGAGRGNGATYPSXXXXXXXXXXXXXXXGQQLXXXXX 972 GASYM+KTQ Q Q QGR MNDG GRG A Y S GQ + Sbjct: 257 GASYMSKTQGQPQPQSQGRGSMNDGMGRGGNANYQSGDGGRNYGRGGWGRGGQGVLNRGP 316 Query: 971 XXXXXXXXXXXGTKNMIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGFD 792 G KNM GFD Sbjct: 317 GGGPMRGRGGMGPKNMAGNVAGVGSGANGGGYGQGIAGPAFGGPAGGMMHHQGMMGAGFD 376 Query: 791 PAFMGRGAGYGGFSGPAFPGMLPPFQAVNPMGLPGVAPHVNPAFFXXXXXXXXXXXXXXX 612 P +MGRG GYGGF G FPGMLP F AVN MGL GVAPHVNPAFF Sbjct: 377 PLYMGRGGGYGGFPGHGFPGMLPSFPAVNSMGLAGVAPHVNPAFFARGMAPNGMGMMASS 436 Query: 611 XXXGPHSGMWNDPNMXXXXXXXXXXXXXESSYGGEDNASEYGYGEASLDKGVRPSAASRE 432 GP+ G ESSY G++ ASEYGYGE + +KG R S ASRE Sbjct: 437 GMEGPNPG-------------------KESSYDGDEGASEYGYGEGNHEKGARSSGASRE 477 Query: 431 KERNSERDWSSNSXXXXXXXXXXXXXXXXXXXXXXXXKDGYRDYRNKERDLGYEDDWDRG 252 KER SERDWS NS KD YR +R +ERD GYEDD DRG Sbjct: 478 KERVSERDWSGNSDRRHRDEREQDWDRSEREPKYREEKDTYRGHRQRERDSGYEDDRDRG 537 Query: 251 -QXXXXXXXXRAVPEEDHRSRSRDADYGKRRRIPSE 147 RA PEED+RSRSRD DYGKRRR PSE Sbjct: 538 HSSSRARSRSRAAPEEDYRSRSRDVDYGKRRRPPSE 573 >ref|XP_009619090.1| PREDICTED: cleavage and polyadenylation specificity factor subunit 6 [Nicotiana tomentosiformis] Length = 648 Score = 425 bits (1093), Expect = e-116 Identities = 217/349 (62%), Positives = 260/349 (74%), Gaps = 4/349 (1%) Frame = -1 Query: 2084 MDPVADEQLDYGDGEYG--QKMQYHQVGAIPALVEEEMIGEXXXXXXXXXXXXVGEGFLQ 1911 MDP ADEQLDYGD EYG KMQYH G IPAL E+EM+GE VGEGFLQ Sbjct: 1 MDPTADEQLDYGDEEYGGSHKMQYHGGGTIPALAEDEMMGEDDEYDDLYNDVNVGEGFLQ 60 Query: 1910 LQQAEAQMPAPGVGNGGSRAPKANVPDARNEARVLQEVNIPGVAKEQNYASSSIQFPEQK 1731 LQ++EA +P GNG R KA+ PDA+ + E IPGVA E YA + ++FPEQK Sbjct: 61 LQRSEAPVPPVDAGNGSFRDQKASFPDAKADGIGSDEAKIPGVATEGKYAGTEVRFPEQK 120 Query: 1730 SGLPADGRPEQIVDASQRGRISEM--THKSQAGHLGFQGSVPMPQKIAADPINLSGKVPG 1557 SG A+ E+ DA+Q+GR M T SQ G+ G+QGS+P QKI ADPIN+ K Sbjct: 121 SGPVAERGTERPADAAQKGRPLAMMLTGDSQMGNSGYQGSIPTTQKIGADPINMPEKNAN 180 Query: 1556 EPSPLPNPTVGSSRGVPEIPASRMNPSSNVNVNRMVDNENLIRPAVENGNTMLFVGELHW 1377 E +PL N VG SR VP++P ++++ S NVN+N + +E IRP++ENGNTMLFVGELHW Sbjct: 181 EATPLVNSGVGGSRVVPQMPTNQLSSSGNVNMNSPIISETPIRPSLENGNTMLFVGELHW 240 Query: 1376 WTTDAELETVLTQYGMVKEIKFFDERASGKSKGYCQVEFYDPAAASACKDGMNGYVFNGR 1197 WTTD+E+E+VLTQYG VKEIKFFDERASGKSKGYCQVEF+DPAAA++CK+GMNG++FNGR Sbjct: 241 WTTDSEIESVLTQYGNVKEIKFFDERASGKSKGYCQVEFFDPAAAASCKEGMNGHIFNGR 300 Query: 1196 ACVVAFATPQTIKQMGASYMNKTQAQAPSQPQGRRPMNDGAGRGNGATY 1050 ACVVAFATPQTIKQMG+SYMNKTQ Q +QPQGRRPMN+G GRG GA Y Sbjct: 301 ACVVAFATPQTIKQMGSSYMNKTQNQVQTQPQGRRPMNEGVGRG-GANY 348 Score = 235 bits (600), Expect = 1e-58 Identities = 126/218 (57%), Positives = 133/218 (61%), Gaps = 1/218 (0%) Frame = -1 Query: 797 FDPAFMGRGAGYGGFSGPAFPGMLPPFQAVNPMGLPGVAPHVNPAFFXXXXXXXXXXXXX 618 FDP FMGRGAGYGGFSGPAFPGM+P F AVNPMGLPGVAPHVNPAFF Sbjct: 431 FDPGFMGRGAGYGGFSGPAFPGMIPQFPAVNPMGLPGVAPHVNPAFFGRGMSANGMGMMG 490 Query: 617 XXXXXGPHSGMWNDPNMXXXXXXXXXXXXXESSYGGEDNASEYGYGEASLDKGVRPSAAS 438 GPH GMW D + ESSYGGEDNASEYGYGE S DKG R SA S Sbjct: 491 NAGMDGPHPGMWTDTSGGGWGGEEHGRRTRESSYGGEDNASEYGYGEVSHDKGARSSAVS 550 Query: 437 REKERNSERDWSSNSXXXXXXXXXXXXXXXXXXXXXXXXKDGYRDYRNKERDLGYEDDWD 258 REKER SERDWS NS +DGYR YR+KER+ YEDD+D Sbjct: 551 REKERGSERDWSGNSERRHRDEREHDRERYDREHRYKEERDGYRHYRHKEREAEYEDDYD 610 Query: 257 RGQ-XXXXXXXXRAVPEEDHRSRSRDADYGKRRRIPSE 147 RGQ RA EEDHRSRSRD +YGKRRR PSE Sbjct: 611 RGQSSSRSRSRSRAAQEEDHRSRSRDTNYGKRRRAPSE 648 >ref|XP_009780918.1| PREDICTED: cleavage and polyadenylation specificity factor subunit 6 [Nicotiana sylvestris] Length = 648 Score = 416 bits (1068), Expect = e-113 Identities = 213/349 (61%), Positives = 256/349 (73%), Gaps = 4/349 (1%) Frame = -1 Query: 2084 MDPVADEQLDYGDGEYG--QKMQYHQVGAIPALVEEEMIGEXXXXXXXXXXXXVGEGFLQ 1911 MDP ADEQLDYGD EYG KMQYH G IPAL E+EM+GE VGEGFLQ Sbjct: 1 MDPTADEQLDYGDEEYGGSHKMQYHGGGTIPALAEDEMMGEDDEYDDLYNDVNVGEGFLQ 60 Query: 1910 LQQAEAQMPAPGVGNGGSRAPKANVPDARNEARVLQEVNIPGVAKEQNYASSSIQFPEQK 1731 LQ++EA +P GN + KA+ PDA+ + E IPGVA E YA + ++FPEQK Sbjct: 61 LQRSEAPVPPVDAGNVSFQDQKASFPDAKADGIGSDEAKIPGVATEGKYAGTEVRFPEQK 120 Query: 1730 SGLPADGRPEQIVDASQRGRISEM--THKSQAGHLGFQGSVPMPQKIAADPINLSGKVPG 1557 SG + E+ DA+Q+GR M T SQ G+ G+QGS+ QKI ADPIN+ K Sbjct: 121 SGPVVERGTERPADAAQKGRPLAMMLTRDSQVGNSGYQGSIQTTQKIGADPINMPEKNAN 180 Query: 1556 EPSPLPNPTVGSSRGVPEIPASRMNPSSNVNVNRMVDNENLIRPAVENGNTMLFVGELHW 1377 E +PL N VG SR V ++P ++++ S NVN+N + +E IRP++ENGNTMLFVGELHW Sbjct: 181 EATPLVNSGVGGSRVVTQMPTNQLSSSGNVNINSPIISETPIRPSLENGNTMLFVGELHW 240 Query: 1376 WTTDAELETVLTQYGMVKEIKFFDERASGKSKGYCQVEFYDPAAASACKDGMNGYVFNGR 1197 WTTDAE+E+VLTQYG VKEIKFFDERASGKSKGYCQVEF+DPAAA++CK+GMNG++FNGR Sbjct: 241 WTTDAEIESVLTQYGNVKEIKFFDERASGKSKGYCQVEFFDPAAAASCKEGMNGHIFNGR 300 Query: 1196 ACVVAFATPQTIKQMGASYMNKTQAQAPSQPQGRRPMNDGAGRGNGATY 1050 ACVVAFATPQTIKQMG+SYMNKTQ Q +QPQGRRPMN+G GRG GA Y Sbjct: 301 ACVVAFATPQTIKQMGSSYMNKTQNQVQTQPQGRRPMNEGVGRG-GANY 348 Score = 237 bits (605), Expect = 3e-59 Identities = 127/218 (58%), Positives = 133/218 (61%), Gaps = 1/218 (0%) Frame = -1 Query: 797 FDPAFMGRGAGYGGFSGPAFPGMLPPFQAVNPMGLPGVAPHVNPAFFXXXXXXXXXXXXX 618 FDP FMGRGAGYGGFSGPAFPGM+P F AVNPMGLPGVAPHVNPAFF Sbjct: 431 FDPGFMGRGAGYGGFSGPAFPGMIPQFPAVNPMGLPGVAPHVNPAFFGRGMSANGMGMMG 490 Query: 617 XXXXXGPHSGMWNDPNMXXXXXXXXXXXXXESSYGGEDNASEYGYGEASLDKGVRPSAAS 438 GPH GMW D + ESSYGGEDNASEYGYGE S DKG R SA S Sbjct: 491 NAGMDGPHPGMWTDTSGGGWGGEEHGRRTRESSYGGEDNASEYGYGEVSHDKGARSSAVS 550 Query: 437 REKERNSERDWSSNSXXXXXXXXXXXXXXXXXXXXXXXXKDGYRDYRNKERDLGYEDDWD 258 REKER SERDWS NS +DGYRDYR KER+ YEDD+D Sbjct: 551 REKERGSERDWSGNSERRHRDEREHDRERYDREHRYKEERDGYRDYRQKERESEYEDDYD 610 Query: 257 RGQ-XXXXXXXXRAVPEEDHRSRSRDADYGKRRRIPSE 147 RGQ RA EEDHRSRSRD +YGKRRR PSE Sbjct: 611 RGQSSSRSRSRSRAAQEEDHRSRSRDTNYGKRRRAPSE 648 >ref|XP_006341786.1| PREDICTED: cleavage and polyadenylation specificity factor subunit CG7185-like isoform X1 [Solanum tuberosum] gi|565349616|ref|XP_006341787.1| PREDICTED: cleavage and polyadenylation specificity factor subunit CG7185-like isoform X2 [Solanum tuberosum] Length = 648 Score = 411 bits (1057), Expect = e-111 Identities = 209/344 (60%), Positives = 249/344 (72%), Gaps = 4/344 (1%) Frame = -1 Query: 2084 MDPVADEQLDYGDGEYG--QKMQYHQVGAIPALVEEEMIGEXXXXXXXXXXXXVGEGFLQ 1911 MDP ADEQLDYGD EYG KMQYH G IPAL E+EM+GE +GEGFLQ Sbjct: 1 MDPTADEQLDYGDEEYGGSHKMQYHGSGTIPALAEDEMMGEDDEYDDLYNDVNIGEGFLQ 60 Query: 1910 LQQAEAQMPAPGVGNGGSRAPKANVPDARNEARVLQEVNIPGVAKEQNYASSSIQFPEQK 1731 LQ++E +P+ GNG +A K + P +R +E IPG+A E YA + +QFP+QK Sbjct: 61 LQRSEVPVPSVDAGNGNFQAQKDSFPASRAGGLGSEEAKIPGIATEGKYAGTEVQFPQQK 120 Query: 1730 SGLPADGRPEQIVDASQRGRISE--MTHKSQAGHLGFQGSVPMPQKIAADPINLSGKVPG 1557 + E+ DA+Q+ R S MT SQAG+ G+QGS+PMPQKI ADP+ + K Sbjct: 121 GEPVVERETERPADAAQKARPSAITMTLNSQAGNSGYQGSMPMPQKIGADPMAMPEKNAS 180 Query: 1556 EPSPLPNPTVGSSRGVPEIPASRMNPSSNVNVNRMVDNENLIRPAVENGNTMLFVGELHW 1377 E +PL N V R VP +P +++N S NVN+N V +E RP++ENGNTMLFVGELHW Sbjct: 181 EATPLMNSVVPGPRVVPHMPTNQLNSSGNVNMNNPVISETPFRPSLENGNTMLFVGELHW 240 Query: 1376 WTTDAELETVLTQYGMVKEIKFFDERASGKSKGYCQVEFYDPAAASACKDGMNGYVFNGR 1197 WTTDAELE+VLTQYG VKEIKFFDERASGKSKGYCQVEF+DPA+A+ACK+GMNGY FNGR Sbjct: 241 WTTDAELESVLTQYGNVKEIKFFDERASGKSKGYCQVEFFDPASAAACKEGMNGYNFNGR 300 Query: 1196 ACVVAFATPQTIKQMGASYMNKTQAQAPSQPQGRRPMNDGAGRG 1065 ACVVAFATPQTIKQMG+SY NKTQ Q SQPQGRRPMN+G GRG Sbjct: 301 ACVVAFATPQTIKQMGSSYANKTQNQVQSQPQGRRPMNEGVGRG 344 Score = 241 bits (616), Expect = 1e-60 Identities = 128/218 (58%), Positives = 136/218 (62%), Gaps = 1/218 (0%) Frame = -1 Query: 797 FDPAFMGRGAGYGGFSGPAFPGMLPPFQAVNPMGLPGVAPHVNPAFFXXXXXXXXXXXXX 618 FDP+FMGRGAGYGGFSGPAFPGM+PPFQAVNPMGLPGVAPHVNPAFF Sbjct: 431 FDPSFMGRGAGYGGFSGPAFPGMMPPFQAVNPMGLPGVAPHVNPAFFGRGMAANGMGMMS 490 Query: 617 XXXXXGPHSGMWNDPNMXXXXXXXXXXXXXESSYGGEDNASEYGYGEASLDKGVRPSAAS 438 GPH GMW D + ESSYGGEDNASEYGYGE S DKG R SA S Sbjct: 491 AAGMDGPHPGMWTDTSGGGWGGEEHGRRTRESSYGGEDNASEYGYGEVSHDKGARSSAVS 550 Query: 437 REKERNSERDWSSNSXXXXXXXXXXXXXXXXXXXXXXXXKDGYRDYRNKERDLGYEDDWD 258 REKER SERDWS NS +DGYRDYR KER+ YE+D+D Sbjct: 551 REKERGSERDWSGNSDKRHRDEREHDRDRHDKEHRYREERDGYRDYRQKERESEYEEDYD 610 Query: 257 RGQ-XXXXXXXXRAVPEEDHRSRSRDADYGKRRRIPSE 147 RGQ RA EEDHRSRSRD +YGKRRR PSE Sbjct: 611 RGQSSSRSRSKSRAAQEEDHRSRSRDTNYGKRRRAPSE 648 >ref|XP_010251347.1| PREDICTED: RNA-binding motif protein, X chromosome-like [Nelumbo nucifera] Length = 599 Score = 387 bits (994), Expect = e-104 Identities = 209/356 (58%), Positives = 250/356 (70%), Gaps = 9/356 (2%) Frame = -1 Query: 2084 MDPVADEQLDYGDGEYG--QKMQYHQVGAIPALVEEEMIGEXXXXXXXXXXXXVGEGFLQ 1911 MDP+A+EQLDYGD EYG QK+QY GAI AL EEEM+GE VG+GFL+ Sbjct: 1 MDPMAEEQLDYGDEEYGGGQKIQYQGGGAISALAEEEMMGEDDEYDDLYNDVNVGDGFLK 60 Query: 1910 LQQAEAQMPAPGVGNGGSRAPKANVPDAR-NEARVLQEVNIPGVAKEQNYASSSIQFPEQ 1734 LQ+ EA +P G+GNGG +A K + +R E QEV+IPGV E ++ F EQ Sbjct: 61 LQRPEAIVPLGGIGNGGIQAQKTDGSRSRVPEPGGSQEVSIPGVGLEGKGSNMVTGFSEQ 120 Query: 1733 KSG--LPADGRPEQIVD----ASQRGRISEMTHKSQAGHLGFQGSVPMPQKIAADPINLS 1572 K G +G E D SQ+GR EM +Q G+LGF+GS P+P K+ ADP S Sbjct: 121 KKGGFSAGNGLEEGTGDYPDGVSQKGRPLEMGPNAQGGNLGFRGSAPIPPKVGADPSQXS 180 Query: 1571 GKVPGEPSPLPNPTVGSSRGVPEIPASRMNPSSNVNVNRMVDNENLIRPAVENGNTMLFV 1392 GK GE S LP+ P++P++RMN NVN+NR + NEN+ R AVENG TMLFV Sbjct: 181 GKFAGESSSLPDSGTAGPXSAPQMPSNRMN--MNVNMNRPMXNENMNRXAVENGTTMLFV 238 Query: 1391 GELHWWTTDAELETVLTQYGMVKEIKFFDERASGKSKGYCQVEFYDPAAASACKDGMNGY 1212 GELHWWTTDAELE VL+QYG VKEIKFFDERASGKSKGYCQVEFYDPAAA+ACK+GM G+ Sbjct: 239 GELHWWTTDAELEXVLSQYGRVKEIKFFDERASGKSKGYCQVEFYDPAAAAACKEGMXGH 298 Query: 1211 VFNGRACVVAFATPQTIKQMGASYMNKTQAQAPSQPQGRRPMNDGAGRGNGATYPS 1044 VFNGRACVVAFA+ QT+KQMGA+Y+NKTQ Q+ SQPQGRR MNDG GRG G +P+ Sbjct: 299 VFNGRACVVAFASXQTLKQMGAAYLNKTQMQSQSQPQGRRFMNDGVGRGGGMNHPA 354 Score = 125 bits (313), Expect = 2e-25 Identities = 71/152 (46%), Positives = 87/152 (57%), Gaps = 2/152 (1%) Frame = -1 Query: 596 HSGMWNDPNMXXXXXXXXXXXXXESSYGGEDNASEYGYGEASLDK-GVRPSAASREKERN 420 H+GMW D +M ESSYGG+D S+YGYGEA ++ G R +AA+REK+R Sbjct: 448 HAGMWTDTSMAGWAGEDHGRRTGESSYGGDDGXSDYGYGEAGHERGGGRSNAATREKDRG 507 Query: 419 SERDWSSNSXXXXXXXXXXXXXXXXXXXXXXXXKDGYRDYRNKERDLGYEDDWDRGQ-XX 243 ERDWS NS KD YR +R +ERD EDDWDRGQ Sbjct: 508 XERDWSGNSERRHRDERDQDWDRSDREHRYKEEKDAYRXHRQRERDWDNEDDWDRGQNSS 567 Query: 242 XXXXXXRAVPEEDHRSRSRDADYGKRRRIPSE 147 R + EE++RSRSR+ADYGKRRR+PSE Sbjct: 568 RSXSKSRMMQEEEYRSRSRBADYGKRRRLPSE 599 >ref|XP_008221952.1| PREDICTED: cleavage and polyadenylation specificity factor subunit CG7185 [Prunus mume] Length = 647 Score = 384 bits (985), Expect = e-103 Identities = 198/354 (55%), Positives = 245/354 (69%), Gaps = 9/354 (2%) Frame = -1 Query: 2084 MDPVADEQLDYGDGEYG--QKMQYHQVGAIPALVEEEMIGEXXXXXXXXXXXXVGEGFLQ 1911 MDP+A+EQ+DY D EYG QK+QY GAI AL +EE + E VGEGFLQ Sbjct: 1 MDPMAEEQIDYEDEEYGGAQKLQYQGSGAISALADEEPMVEDDEYDDLYNDVNVGEGFLQ 60 Query: 1910 LQQAEAQMPAPGVGNGGSRAPKANVPDARNEARVLQEVNIPGVAKEQNYASSSIQFPEQK 1731 + ++EA +P GVGNGG +A K +V + R +A V QE IPGV+ + Y+S+ QFPEQ+ Sbjct: 61 MHRSEAPLPPGGVGNGGLQAQKTDVTETRVQAGVSQESKIPGVSVQGKYSSAVAQFPEQQ 120 Query: 1730 SGLPADGRPEQI-------VDASQRGRISEMTHKSQAGHLGFQGSVPMPQKIAADPINLS 1572 P PE SQ+GR EM+H +Q H+GFQGS MP I D +++ Sbjct: 121 DQPPVAKEPELGSTGYVGGASGSQKGRAMEMSHDTQVRHMGFQGSTTMPPNIGGDSSDIT 180 Query: 1571 GKVPGEPSPLPNPTVGSSRGVPEIPASRMNPSSNVNVNRMVDNENLIRPAVENGNTMLFV 1392 GK E P N GV ++P +++ S VN NR + NEN +RP VENG+TMLFV Sbjct: 181 GKTALESVPSMNSGTAGPTGVTQMPTNQI--SIKVNANRPMFNENQVRPTVENGSTMLFV 238 Query: 1391 GELHWWTTDAELETVLTQYGMVKEIKFFDERASGKSKGYCQVEFYDPAAASACKDGMNGY 1212 GELHWWTTD+ELE+VL+QYG VKEIKFFDERASGKSKGYCQVEF+DPAAA+ACK+GM+GY Sbjct: 239 GELHWWTTDSELESVLSQYGRVKEIKFFDERASGKSKGYCQVEFHDPAAATACKEGMDGY 298 Query: 1211 VFNGRACVVAFATPQTIKQMGASYMNKTQAQAPSQPQGRRPMNDGAGRGNGATY 1050 +FNGRACVVAFA+PQT+KQMGASY++K+Q Q SQ GRRPMNDG GRG G Y Sbjct: 299 LFNGRACVVAFASPQTLKQMGASYLSKSQGQTQSQQPGRRPMNDGVGRGGGVNY 352 Score = 204 bits (518), Expect = 3e-49 Identities = 113/222 (50%), Positives = 126/222 (56%), Gaps = 5/222 (2%) Frame = -1 Query: 797 FDPAFMGRGAGYGGFSGPAFPGMLPPFQAVNPMGLPGVAPHVNPAFFXXXXXXXXXXXXX 618 FDP +MGRG GYGGF GPAFPGML F AVN MGL GVAPHVNPAFF Sbjct: 439 FDPTYMGRGGGYGGFPGPAFPGMLSSFPAVNTMGLAGVAPHVNPAFFGRGMATNGMGMMG 498 Query: 617 XXXXXGPHSGMWNDPNMXXXXXXXXXXXXXESSYGGEDNASEYGYGEASLDKGVRPSAAS 438 G H+GMWNDP+M ESSYGG+D ASEYGYGEA+ +KG Sbjct: 499 SSGMDGHHAGMWNDPSMGGWAGEEHGRRTRESSYGGDDGASEYGYGEANHEKG------- 551 Query: 437 REKERNSERDWSSNS----XXXXXXXXXXXXXXXXXXXXXXXXKDGYRDYRNKERDLGYE 270 SERDWS NS KD YRD+R +ERD+GYE Sbjct: 552 ------SERDWSGNSERRHRDEREQDWDRSERGEHREHRYKEEKDSYRDHRQRERDVGYE 605 Query: 269 DDWDRGQ-XXXXXXXXRAVPEEDHRSRSRDADYGKRRRIPSE 147 DDWDRGQ +A+PE+DHRSRSRD DYGKRRR+PSE Sbjct: 606 DDWDRGQSSSRPRSRSKAMPEDDHRSRSRDVDYGKRRRLPSE 647