BLASTX nr result

ID: Forsythia22_contig00001771 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Forsythia22_contig00001771
         (808 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011080439.1| PREDICTED: RNA polymerase II-associated fact...   120   1e-24
ref|XP_006343037.1| PREDICTED: RNA polymerase II-associated fact...    90   2e-15
ref|XP_004235642.1| PREDICTED: RNA polymerase II-associated fact...    86   3e-14
ref|XP_010665896.1| PREDICTED: RNA polymerase II-associated fact...    81   7e-13
ref|XP_009608739.1| PREDICTED: RNA polymerase II-associated fact...    68   6e-09
ref|XP_009786773.1| PREDICTED: RNA polymerase II-associated fact...    66   3e-08
ref|XP_010062533.1| PREDICTED: dynactin, 150 kDa isoform [Eucaly...    65   5e-08
emb|CDO97975.1| unnamed protein product [Coffea canephora]             60   2e-06
ref|XP_008228451.1| PREDICTED: bromodomain-containing protein 4 ...    58   6e-06
ref|XP_007217663.1| hypothetical protein PRUPE_ppa002145mg [Prun...    58   6e-06

>ref|XP_011080439.1| PREDICTED: RNA polymerase II-associated factor 1 homolog [Sesamum
           indicum]
          Length = 698

 Score =  120 bits (300), Expect = 1e-24
 Identities = 60/87 (68%), Positives = 66/87 (75%), Gaps = 4/87 (4%)
 Frame = -3

Query: 398 MASYRPFHPSVQSTIVPPPAAPPDQSILQPPAPP-PSHG-NQFSQNWDTYSGKESSAYNQ 225
           MASYRPFHP  QST  PPP  PP+Q+ LQPPAPP PS G NQ+SQNW  YSG E S YNQ
Sbjct: 1   MASYRPFHPPPQSTFAPPPPPPPNQNPLQPPAPPQPSRGSNQYSQNWGPYSGNEGSNYNQ 60

Query: 224 NYAQMNLSSNYQHAGYGTSS--QQHFN 150
           NY+Q N SSNY  +GYG+SS  QQHFN
Sbjct: 61  NYSQTNPSSNYPGSGYGSSSSQQQHFN 87


>ref|XP_006343037.1| PREDICTED: RNA polymerase II-associated factor 1 homolog [Solanum
           tuberosum]
          Length = 700

 Score = 89.7 bits (221), Expect = 2e-15
 Identities = 42/75 (56%), Positives = 51/75 (68%), Gaps = 1/75 (1%)
 Frame = -3

Query: 398 MASYRPFHPSVQSTIVPPPAAPPDQSILQPPAPPPSHGNQFSQNWDTYSGKESSAY-NQN 222
           MASYRPF P  QS+ VPPP  PP Q+   PP P  S G+Q+SQNW  Y   + S+Y  QN
Sbjct: 1   MASYRPFPPPSQSSFVPPPPPPPPQNQNPPPPPSQSRGSQYSQNWGGYGVNDGSSYTQQN 60

Query: 221 YAQMNLSSNYQHAGY 177
           Y+Q++ SSNYQH GY
Sbjct: 61  YSQVHQSSNYQHPGY 75


>ref|XP_004235642.1| PREDICTED: RNA polymerase II-associated factor 1 homolog [Solanum
           lycopersicum]
          Length = 698

 Score = 85.9 bits (211), Expect = 3e-14
 Identities = 42/75 (56%), Positives = 51/75 (68%), Gaps = 1/75 (1%)
 Frame = -3

Query: 398 MASYRPFHPSVQSTIVPPPAAPPDQSILQPPAPPPSHGNQFSQNWDTYSGKESSAY-NQN 222
           MASYRPF PS QS+ VPPP  PP Q+   PP P  S G+Q+SQNW  Y   + S+Y  QN
Sbjct: 1   MASYRPFPPSSQSSFVPPP--PPPQNQNPPPPPSQSRGSQYSQNWGGYGVNDGSSYAQQN 58

Query: 221 YAQMNLSSNYQHAGY 177
           Y+Q++  SNYQH GY
Sbjct: 59  YSQVHQGSNYQHPGY 73


>ref|XP_010665896.1| PREDICTED: RNA polymerase II-associated factor 1 homolog [Beta
           vulgaris subsp. vulgaris] gi|870843271|gb|KMS96483.1|
           hypothetical protein BVRB_9g224760 [Beta vulgaris subsp.
           vulgaris]
          Length = 700

 Score = 81.3 bits (199), Expect = 7e-13
 Identities = 40/82 (48%), Positives = 53/82 (64%), Gaps = 1/82 (1%)
 Frame = -3

Query: 398 MASYRPFHPSVQSTIVPPPAAPPDQSILQPPAP-PPSHGNQFSQNWDTYSGKESSAYNQN 222
           MASYRP+ P  Q    PPP  PP Q+ L PP P P SHGNQ+ QNW    G  S+ Y QN
Sbjct: 1   MASYRPYPPPPQQQSFPPP--PPAQNPLPPPPPRPQSHGNQYPQNW----GSASAPYTQN 54

Query: 221 YAQMNLSSNYQHAGYGTSSQQH 156
           Y Q+  ++N+QH+GY +++ Q+
Sbjct: 55  YTQVAPNTNFQHSGYNSATHQY 76


>ref|XP_009608739.1| PREDICTED: RNA polymerase II-associated factor 1 homolog [Nicotiana
           tomentosiformis]
          Length = 656

 Score = 68.2 bits (165), Expect = 6e-09
 Identities = 40/74 (54%), Positives = 43/74 (58%)
 Frame = -3

Query: 398 MASYRPFHPSVQSTIVPPPAAPPDQSILQPPAPPPSHGNQFSQNWDTYSGKESSAYNQNY 219
           MASYRPF P  QS+ VPPP  PP Q+   PP PPPS   QFSQNW    G  SS+Y Q  
Sbjct: 1   MASYRPFPPPSQSSFVPPP--PPPQNQNPPPPPPPS---QFSQNWG--YGGSSSSYTQQ- 52

Query: 218 AQMNLSSNYQHAGY 177
                  NYQH GY
Sbjct: 53  -----QQNYQHPGY 61


>ref|XP_009786773.1| PREDICTED: RNA polymerase II-associated factor 1 homolog [Nicotiana
           sylvestris]
          Length = 656

 Score = 65.9 bits (159), Expect = 3e-08
 Identities = 39/74 (52%), Positives = 42/74 (56%)
 Frame = -3

Query: 398 MASYRPFHPSVQSTIVPPPAAPPDQSILQPPAPPPSHGNQFSQNWDTYSGKESSAYNQNY 219
           MASYRPF P  QS+ VPPP  PP Q+   PP PPPS   QFSQNW    G  SS+Y Q  
Sbjct: 1   MASYRPFPPPSQSSFVPPP--PPPQNQNPPPPPPPS---QFSQNWG--YGGSSSSYTQQ- 52

Query: 218 AQMNLSSNYQHAGY 177
                  NYQH  Y
Sbjct: 53  -----QQNYQHPAY 61


>ref|XP_010062533.1| PREDICTED: dynactin, 150 kDa isoform [Eucalyptus grandis]
           gi|629104211|gb|KCW69680.1| hypothetical protein
           EUGRSUZ_F03078 [Eucalyptus grandis]
          Length = 720

 Score = 65.1 bits (157), Expect = 5e-08
 Identities = 40/96 (41%), Positives = 50/96 (52%), Gaps = 15/96 (15%)
 Frame = -3

Query: 398 MASYRPFHPSVQSTIVPPPAAPPDQSILQPPAPPP-----SHGNQFSQNWDTYSG----- 249
           MASYRPF P  QS+  PPP+  P    L PP PPP       G Q+SQNW    G     
Sbjct: 1   MASYRPFPP--QSSFGPPPSQNP----LPPPPPPPPISQPQAGTQYSQNWGYGGGGGGGD 54

Query: 248 -----KESSAYNQNYAQMNLSSNYQHAGYGTSSQQH 156
                  ++A+ QNY+Q++ +SNY H  Y  S  QH
Sbjct: 55  VPMPSAATAAFPQNYSQIHPNSNYPHQPYNPSRPQH 90


>emb|CDO97975.1| unnamed protein product [Coffea canephora]
          Length = 706

 Score = 60.1 bits (144), Expect = 2e-06
 Identities = 35/74 (47%), Positives = 39/74 (52%), Gaps = 14/74 (18%)
 Frame = -3

Query: 398 MASYRPFHPSVQSTIV---------PPPAAPPDQSILQPPAPPP-----SHGNQFSQNWD 261
           MASYRPF P  QST           PPP  P +Q+ LQPPA PP     S GNQ+SQNW 
Sbjct: 1   MASYRPFPPPPQSTFAPRPPPPPPPPPPPGPANQNPLQPPALPPHQQQQSQGNQYSQNWG 60

Query: 260 TYSGKESSAYNQNY 219
                 +S Y Q Y
Sbjct: 61  YSQMPPNSNYPQPY 74


>ref|XP_008228451.1| PREDICTED: bromodomain-containing protein 4 [Prunus mume]
          Length = 658

 Score = 58.2 bits (139), Expect = 6e-06
 Identities = 38/93 (40%), Positives = 42/93 (45%), Gaps = 12/93 (12%)
 Frame = -3

Query: 398 MASYRPFHPSVQSTIVPPPAAPPDQSILQPPAPPPSHGNQFSQNW------------DTY 255
           MASYRPF P  QS+  PPP   P      PP PP   GNQ++QNW            D  
Sbjct: 1   MASYRPFPP--QSSFGPPPNQNPLTPT--PPPPPSQRGNQYNQNWGYNASSAGGGGGDGA 56

Query: 254 SGKESSAYNQNYAQMNLSSNYQHAGYGTSSQQH 156
               SS+Y QNY       NY H  YG    QH
Sbjct: 57  VPAASSSYPQNY-------NYNHGNYGPPRTQH 82


>ref|XP_007217663.1| hypothetical protein PRUPE_ppa002145mg [Prunus persica]
           gi|462413813|gb|EMJ18862.1| hypothetical protein
           PRUPE_ppa002145mg [Prunus persica]
          Length = 709

 Score = 58.2 bits (139), Expect = 6e-06
 Identities = 38/93 (40%), Positives = 42/93 (45%), Gaps = 12/93 (12%)
 Frame = -3

Query: 398 MASYRPFHPSVQSTIVPPPAAPPDQSILQPPAPPPSHGNQFSQNW------------DTY 255
           MASYRPF P  QS+  PPP   P      PP PP   GNQ++QNW            D  
Sbjct: 1   MASYRPFPP--QSSFGPPPNQNPLTPT--PPPPPSQRGNQYNQNWGYNASSGGGGGGDGA 56

Query: 254 SGKESSAYNQNYAQMNLSSNYQHAGYGTSSQQH 156
               SS+Y QNY       NY H  YG    QH
Sbjct: 57  VPAASSSYPQNY-------NYNHGNYGPPRTQH 82


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