BLASTX nr result
ID: Forsythia22_contig00000176
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Forsythia22_contig00000176
(863 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CDY19734.1| BnaA09g03870D [Brassica napus] 182 3e-43
emb|CDX99972.1| BnaC09g03290D [Brassica napus] 181 4e-43
emb|CBI39513.3| unnamed protein product [Vitis vinifera] 181 4e-43
gb|KGN54771.1| hypothetical protein Csa_4G486190 [Cucumis sativus] 181 7e-43
ref|XP_010684532.1| PREDICTED: probable U6 snRNA-associated Sm-l... 179 2e-42
ref|XP_010550988.1| PREDICTED: probable U6 snRNA-associated Sm-l... 179 2e-42
ref|XP_010546724.1| PREDICTED: probable U6 snRNA-associated Sm-l... 179 2e-42
ref|XP_010493981.1| PREDICTED: probable U6 snRNA-associated Sm-l... 179 2e-42
ref|XP_009151187.1| PREDICTED: probable U6 snRNA-associated Sm-l... 179 2e-42
gb|KEH19398.1| u6 snRNA-associated-like-Smprotein [Medicago trun... 179 2e-42
emb|CBI36838.3| unnamed protein product [Vitis vinifera] 179 2e-42
ref|NP_198124.1| U6 snRNA-associated Sm-like protein LSm4 [Arab... 179 2e-42
ref|XP_006408062.1| hypothetical protein EUTSA_v10021732mg [Eutr... 179 2e-42
gb|EPS71391.1| hypothetical protein M569_03371, partial [Genlise... 179 2e-42
ref|XP_006288890.1| hypothetical protein CARUB_v10002252mg [Caps... 179 2e-42
ref|XP_003625914.1| U6 snRNA-associated Sm-like protein LSm4 [Me... 179 2e-42
ref|XP_002874352.1| hypothetical protein ARALYDRAFT_326933 [Arab... 179 2e-42
gb|AET04566.2| u6 snRNA-associated-like-Smprotein [Medicago trun... 179 2e-42
gb|AAM65462.1| glycine rich protein-like [Arabidopsis thaliana] 179 2e-42
emb|CDX80625.1| BnaC07g28190D [Brassica napus] 179 3e-42
>emb|CDY19734.1| BnaA09g03870D [Brassica napus]
Length = 133
Score = 182 bits (461), Expect = 3e-43
Identities = 84/85 (98%), Positives = 85/85 (100%)
Frame = -2
Query: 802 KKMLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPE 623
+KMLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPE
Sbjct: 3 EKMLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPE 62
Query: 622 CYIRGNTIKYLRVPDEVIDKVQEEK 548
CYIRGNTIKYLRVPDEVIDKVQEEK
Sbjct: 63 CYIRGNTIKYLRVPDEVIDKVQEEK 87
>emb|CDX99972.1| BnaC09g03290D [Brassica napus]
Length = 140
Score = 181 bits (460), Expect = 4e-43
Identities = 84/84 (100%), Positives = 84/84 (100%)
Frame = -2
Query: 799 KMLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPEC 620
KMLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPEC
Sbjct: 9 KMLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPEC 68
Query: 619 YIRGNTIKYLRVPDEVIDKVQEEK 548
YIRGNTIKYLRVPDEVIDKVQEEK
Sbjct: 69 YIRGNTIKYLRVPDEVIDKVQEEK 92
>emb|CBI39513.3| unnamed protein product [Vitis vinifera]
Length = 162
Score = 181 bits (460), Expect = 4e-43
Identities = 84/84 (100%), Positives = 84/84 (100%)
Frame = -2
Query: 802 KKMLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPE 623
KKMLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPE
Sbjct: 12 KKMLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPE 71
Query: 622 CYIRGNTIKYLRVPDEVIDKVQEE 551
CYIRGNTIKYLRVPDEVIDKVQEE
Sbjct: 72 CYIRGNTIKYLRVPDEVIDKVQEE 95
>gb|KGN54771.1| hypothetical protein Csa_4G486190 [Cucumis sativus]
Length = 244
Score = 181 bits (458), Expect = 7e-43
Identities = 84/88 (95%), Positives = 85/88 (96%)
Frame = -2
Query: 814 CTRNKKMLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFW 635
C + KMLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFW
Sbjct: 90 CFISLKMLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFW 149
Query: 634 RMPECYIRGNTIKYLRVPDEVIDKVQEE 551
RMPECYIRGNTIKYLRVPDEVIDKVQEE
Sbjct: 150 RMPECYIRGNTIKYLRVPDEVIDKVQEE 177
>ref|XP_010684532.1| PREDICTED: probable U6 snRNA-associated Sm-like protein LSm4 [Beta
vulgaris subsp. vulgaris] gi|870854195|gb|KMT06000.1|
hypothetical protein BVRB_7g164860 [Beta vulgaris subsp.
vulgaris]
Length = 145
Score = 179 bits (455), Expect = 2e-42
Identities = 83/83 (100%), Positives = 83/83 (100%)
Frame = -2
Query: 796 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 617
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY
Sbjct: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
Query: 616 IRGNTIKYLRVPDEVIDKVQEEK 548
IRGNTIKYLRVPDEVIDKVQEEK
Sbjct: 61 IRGNTIKYLRVPDEVIDKVQEEK 83
>ref|XP_010550988.1| PREDICTED: probable U6 snRNA-associated Sm-like protein LSm4
[Tarenaya hassleriana]
Length = 136
Score = 179 bits (455), Expect = 2e-42
Identities = 83/83 (100%), Positives = 83/83 (100%)
Frame = -2
Query: 796 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 617
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY
Sbjct: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
Query: 616 IRGNTIKYLRVPDEVIDKVQEEK 548
IRGNTIKYLRVPDEVIDKVQEEK
Sbjct: 61 IRGNTIKYLRVPDEVIDKVQEEK 83
>ref|XP_010546724.1| PREDICTED: probable U6 snRNA-associated Sm-like protein LSm4
[Tarenaya hassleriana]
Length = 141
Score = 179 bits (455), Expect = 2e-42
Identities = 83/83 (100%), Positives = 83/83 (100%)
Frame = -2
Query: 796 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 617
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY
Sbjct: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
Query: 616 IRGNTIKYLRVPDEVIDKVQEEK 548
IRGNTIKYLRVPDEVIDKVQEEK
Sbjct: 61 IRGNTIKYLRVPDEVIDKVQEEK 83
>ref|XP_010493981.1| PREDICTED: probable U6 snRNA-associated Sm-like protein LSm4
[Camelina sativa]
Length = 129
Score = 179 bits (455), Expect = 2e-42
Identities = 83/83 (100%), Positives = 83/83 (100%)
Frame = -2
Query: 796 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 617
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY
Sbjct: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
Query: 616 IRGNTIKYLRVPDEVIDKVQEEK 548
IRGNTIKYLRVPDEVIDKVQEEK
Sbjct: 61 IRGNTIKYLRVPDEVIDKVQEEK 83
>ref|XP_009151187.1| PREDICTED: probable U6 snRNA-associated Sm-like protein LSm4
[Brassica rapa] gi|685322802|ref|XP_009151188.1|
PREDICTED: probable U6 snRNA-associated Sm-like protein
LSm4 [Brassica rapa] gi|685352938|ref|XP_009111743.1|
PREDICTED: probable U6 snRNA-associated Sm-like protein
LSm4 [Brassica rapa]
Length = 129
Score = 179 bits (455), Expect = 2e-42
Identities = 83/83 (100%), Positives = 83/83 (100%)
Frame = -2
Query: 796 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 617
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY
Sbjct: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
Query: 616 IRGNTIKYLRVPDEVIDKVQEEK 548
IRGNTIKYLRVPDEVIDKVQEEK
Sbjct: 61 IRGNTIKYLRVPDEVIDKVQEEK 83
>gb|KEH19398.1| u6 snRNA-associated-like-Smprotein [Medicago truncatula]
gi|657373789|gb|AET02932.2| u6
snRNA-associated-like-Smprotein [Medicago truncatula]
Length = 146
Score = 179 bits (455), Expect = 2e-42
Identities = 83/83 (100%), Positives = 83/83 (100%)
Frame = -2
Query: 796 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 617
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY
Sbjct: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
Query: 616 IRGNTIKYLRVPDEVIDKVQEEK 548
IRGNTIKYLRVPDEVIDKVQEEK
Sbjct: 61 IRGNTIKYLRVPDEVIDKVQEEK 83
>emb|CBI36838.3| unnamed protein product [Vitis vinifera]
Length = 196
Score = 179 bits (455), Expect = 2e-42
Identities = 83/83 (100%), Positives = 83/83 (100%)
Frame = -2
Query: 799 KMLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPEC 620
KMLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPEC
Sbjct: 46 KMLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPEC 105
Query: 619 YIRGNTIKYLRVPDEVIDKVQEE 551
YIRGNTIKYLRVPDEVIDKVQEE
Sbjct: 106 YIRGNTIKYLRVPDEVIDKVQEE 128
>ref|NP_198124.1| U6 snRNA-associated Sm-like protein LSm4 [Arabidopsis thaliana]
gi|745998020|sp|F4K4E3.1|LSM4_ARATH RecName:
Full=Sm-like protein LSM4; Short=AtLSM4; AltName:
Full=Protein EMBRYO DEFECTIVE 1644; AltName: Full=U6
snRNA-associated Sm-like protein LSM4
gi|332006335|gb|AED93718.1| U6 snRNA-associated Sm-like
protein LSm4 [Arabidopsis thaliana]
Length = 129
Score = 179 bits (455), Expect = 2e-42
Identities = 83/83 (100%), Positives = 83/83 (100%)
Frame = -2
Query: 796 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 617
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY
Sbjct: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
Query: 616 IRGNTIKYLRVPDEVIDKVQEEK 548
IRGNTIKYLRVPDEVIDKVQEEK
Sbjct: 61 IRGNTIKYLRVPDEVIDKVQEEK 83
>ref|XP_006408062.1| hypothetical protein EUTSA_v10021732mg [Eutrema salsugineum]
gi|557109208|gb|ESQ49515.1| hypothetical protein
EUTSA_v10021732mg [Eutrema salsugineum]
Length = 138
Score = 179 bits (455), Expect = 2e-42
Identities = 83/83 (100%), Positives = 83/83 (100%)
Frame = -2
Query: 796 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 617
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY
Sbjct: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
Query: 616 IRGNTIKYLRVPDEVIDKVQEEK 548
IRGNTIKYLRVPDEVIDKVQEEK
Sbjct: 61 IRGNTIKYLRVPDEVIDKVQEEK 83
>gb|EPS71391.1| hypothetical protein M569_03371, partial [Genlisea aurea]
Length = 150
Score = 179 bits (455), Expect = 2e-42
Identities = 83/83 (100%), Positives = 83/83 (100%)
Frame = -2
Query: 799 KMLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPEC 620
KMLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPEC
Sbjct: 2 KMLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPEC 61
Query: 619 YIRGNTIKYLRVPDEVIDKVQEE 551
YIRGNTIKYLRVPDEVIDKVQEE
Sbjct: 62 YIRGNTIKYLRVPDEVIDKVQEE 84
>ref|XP_006288890.1| hypothetical protein CARUB_v10002252mg [Capsella rubella]
gi|727565467|ref|XP_010455092.1| PREDICTED: probable U6
snRNA-associated Sm-like protein LSm4 [Camelina sativa]
gi|482557596|gb|EOA21788.1| hypothetical protein
CARUB_v10002252mg [Capsella rubella]
Length = 129
Score = 179 bits (455), Expect = 2e-42
Identities = 83/83 (100%), Positives = 83/83 (100%)
Frame = -2
Query: 796 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 617
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY
Sbjct: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
Query: 616 IRGNTIKYLRVPDEVIDKVQEEK 548
IRGNTIKYLRVPDEVIDKVQEEK
Sbjct: 61 IRGNTIKYLRVPDEVIDKVQEEK 83
>ref|XP_003625914.1| U6 snRNA-associated Sm-like protein LSm4 [Medicago truncatula]
gi|357516335|ref|XP_003628456.1| U6 snRNA-associated
Sm-like protein LSm4 [Medicago truncatula]
gi|355500929|gb|AES82132.1| u6
snRNA-associated-like-Smprotein [Medicago truncatula]
Length = 150
Score = 179 bits (455), Expect = 2e-42
Identities = 83/83 (100%), Positives = 83/83 (100%)
Frame = -2
Query: 796 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 617
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY
Sbjct: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
Query: 616 IRGNTIKYLRVPDEVIDKVQEEK 548
IRGNTIKYLRVPDEVIDKVQEEK
Sbjct: 61 IRGNTIKYLRVPDEVIDKVQEEK 83
>ref|XP_002874352.1| hypothetical protein ARALYDRAFT_326933 [Arabidopsis lyrata subsp.
lyrata] gi|297320189|gb|EFH50611.1| hypothetical protein
ARALYDRAFT_326933 [Arabidopsis lyrata subsp. lyrata]
Length = 143
Score = 179 bits (455), Expect = 2e-42
Identities = 83/83 (100%), Positives = 83/83 (100%)
Frame = -2
Query: 796 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 617
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY
Sbjct: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
Query: 616 IRGNTIKYLRVPDEVIDKVQEEK 548
IRGNTIKYLRVPDEVIDKVQEEK
Sbjct: 61 IRGNTIKYLRVPDEVIDKVQEEK 83
>gb|AET04566.2| u6 snRNA-associated-like-Smprotein [Medicago truncatula]
Length = 150
Score = 179 bits (455), Expect = 2e-42
Identities = 83/83 (100%), Positives = 83/83 (100%)
Frame = -2
Query: 796 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 617
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY
Sbjct: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
Query: 616 IRGNTIKYLRVPDEVIDKVQEEK 548
IRGNTIKYLRVPDEVIDKVQEEK
Sbjct: 61 IRGNTIKYLRVPDEVIDKVQEEK 83
>gb|AAM65462.1| glycine rich protein-like [Arabidopsis thaliana]
Length = 129
Score = 179 bits (455), Expect = 2e-42
Identities = 83/83 (100%), Positives = 83/83 (100%)
Frame = -2
Query: 796 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 617
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY
Sbjct: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
Query: 616 IRGNTIKYLRVPDEVIDKVQEEK 548
IRGNTIKYLRVPDEVIDKVQEEK
Sbjct: 61 IRGNTIKYLRVPDEVIDKVQEEK 83
>emb|CDX80625.1| BnaC07g28190D [Brassica napus]
Length = 138
Score = 179 bits (453), Expect = 3e-42
Identities = 83/85 (97%), Positives = 83/85 (97%)
Frame = -2
Query: 802 KKMLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPE 623
K LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPE
Sbjct: 8 KLFLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPE 67
Query: 622 CYIRGNTIKYLRVPDEVIDKVQEEK 548
CYIRGNTIKYLRVPDEVIDKVQEEK
Sbjct: 68 CYIRGNTIKYLRVPDEVIDKVQEEK 92