BLASTX nr result

ID: Forsythia21_contig00061213 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Forsythia21_contig00061213
         (232 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AES80976.2| F-box SKIP24-like protein [Medicago truncatula]         59   1e-06
ref|XP_003624776.1| F-box protein SKIP24 [Medicago truncatula]         59   1e-06
ref|XP_003624758.1| F-box protein SKIP24 [Medicago truncatula]         59   1e-06
ref|XP_010312326.1| PREDICTED: F-box protein SKIP24 isoform X2 [...    58   3e-06
ref|XP_004249658.1| PREDICTED: F-box protein SKIP24 isoform X1 [...    58   3e-06
ref|XP_004493251.1| PREDICTED: F-box protein SKIP24 isoform X2 [...    56   8e-06
ref|XP_004493249.1| PREDICTED: F-box protein SKIP24 isoform X1 [...    56   8e-06
ref|XP_003624761.1| F-box protein SKIP24 [Medicago truncatula] g...    56   8e-06

>gb|AES80976.2| F-box SKIP24-like protein [Medicago truncatula]
          Length = 241

 Score = 58.9 bits (141), Expect = 1e-06
 Identities = 25/63 (39%), Positives = 42/63 (66%)
 Frame = -2

Query: 231 IGVENLVLDFEDLCRLSLTCKCLYKLSNEDSLWSLMLYQDFYYDEEDGTIASKKDLYKFR 52
           IG+++  L ++DLC +S++C+ L++LS EDSLW+ +L  DF       + +S K LYK R
Sbjct: 15  IGIQDCGLSYKDLCCISISCRLLHRLSVEDSLWNRLLSSDFPSSSTSSSSSSSKSLYKLR 74

Query: 51  YSQ 43
           + +
Sbjct: 75  FER 77


>ref|XP_003624776.1| F-box protein SKIP24 [Medicago truncatula]
          Length = 269

 Score = 58.9 bits (141), Expect = 1e-06
 Identities = 25/63 (39%), Positives = 42/63 (66%)
 Frame = -2

Query: 231 IGVENLVLDFEDLCRLSLTCKCLYKLSNEDSLWSLMLYQDFYYDEEDGTIASKKDLYKFR 52
           IG+++  L ++DLC +S++C+ L++LS EDSLW+ +L  DF       + +S K LYK R
Sbjct: 15  IGIQDCGLSYKDLCCISISCRLLHRLSVEDSLWNRLLSSDFPSSSTSSSSSSSKSLYKLR 74

Query: 51  YSQ 43
           + +
Sbjct: 75  FER 77


>ref|XP_003624758.1| F-box protein SKIP24 [Medicago truncatula]
          Length = 241

 Score = 58.9 bits (141), Expect = 1e-06
 Identities = 25/63 (39%), Positives = 42/63 (66%)
 Frame = -2

Query: 231 IGVENLVLDFEDLCRLSLTCKCLYKLSNEDSLWSLMLYQDFYYDEEDGTIASKKDLYKFR 52
           IG+++  L ++DLC +S++C+ L++LS EDSLW+ +L  DF       + +S K LYK R
Sbjct: 15  IGIQDCGLSYKDLCCISISCRLLHRLSVEDSLWNRLLSSDFPSSSTSSSSSSSKSLYKLR 74

Query: 51  YSQ 43
           + +
Sbjct: 75  FER 77


>ref|XP_010312326.1| PREDICTED: F-box protein SKIP24 isoform X2 [Solanum lycopersicum]
          Length = 239

 Score = 57.8 bits (138), Expect = 3e-06
 Identities = 28/65 (43%), Positives = 40/65 (61%), Gaps = 2/65 (3%)
 Frame = -2

Query: 231 IGVENLVLDFEDLCRLSLTCKCLYKLSNEDSLWSLMLYQDF--YYDEEDGTIASKKDLYK 58
           IG+E+   +++DLC LS+TC  L +LS++DSLWS + + DF  Y         S K LYK
Sbjct: 19  IGIESSNFNYKDLCCLSITCTLLNRLSSDDSLWSSLFFADFPQYQQPSSSCSVSSKWLYK 78

Query: 57  FRYSQ 43
            RY +
Sbjct: 79  IRYEK 83


>ref|XP_004249658.1| PREDICTED: F-box protein SKIP24 isoform X1 [Solanum lycopersicum]
          Length = 274

 Score = 57.8 bits (138), Expect = 3e-06
 Identities = 28/65 (43%), Positives = 40/65 (61%), Gaps = 2/65 (3%)
 Frame = -2

Query: 231 IGVENLVLDFEDLCRLSLTCKCLYKLSNEDSLWSLMLYQDF--YYDEEDGTIASKKDLYK 58
           IG+E+   +++DLC LS+TC  L +LS++DSLWS + + DF  Y         S K LYK
Sbjct: 19  IGIESSNFNYKDLCCLSITCTLLNRLSSDDSLWSSLFFADFPQYQQPSSSCSVSSKWLYK 78

Query: 57  FRYSQ 43
            RY +
Sbjct: 79  IRYEK 83


>ref|XP_004493251.1| PREDICTED: F-box protein SKIP24 isoform X2 [Cicer arietinum]
          Length = 242

 Score = 56.2 bits (134), Expect = 8e-06
 Identities = 24/63 (38%), Positives = 42/63 (66%)
 Frame = -2

Query: 231 IGVENLVLDFEDLCRLSLTCKCLYKLSNEDSLWSLMLYQDFYYDEEDGTIASKKDLYKFR 52
           IG+    L ++DLC +S++C+ L++LS++DSLW+ +L  +F       + +S K LYKFR
Sbjct: 15  IGIGKSGLSYKDLCCISISCRLLHRLSSDDSLWNHLLSSEFPLSPSPPSNSSSKSLYKFR 74

Query: 51  YSQ 43
           + +
Sbjct: 75  FER 77


>ref|XP_004493249.1| PREDICTED: F-box protein SKIP24 isoform X1 [Cicer arietinum]
          Length = 246

 Score = 56.2 bits (134), Expect = 8e-06
 Identities = 24/63 (38%), Positives = 42/63 (66%)
 Frame = -2

Query: 231 IGVENLVLDFEDLCRLSLTCKCLYKLSNEDSLWSLMLYQDFYYDEEDGTIASKKDLYKFR 52
           IG+    L ++DLC +S++C+ L++LS++DSLW+ +L  +F       + +S K LYKFR
Sbjct: 15  IGIGKSGLSYKDLCCISISCRLLHRLSSDDSLWNHLLSSEFPLSPSPPSNSSSKSLYKFR 74

Query: 51  YSQ 43
           + +
Sbjct: 75  FER 77


>ref|XP_003624761.1| F-box protein SKIP24 [Medicago truncatula]
           gi|357508969|ref|XP_003624773.1| F-box protein SKIP24
           [Medicago truncatula] gi|355499776|gb|AES80979.1| F-box
           protein SKIP2 [Medicago truncatula]
          Length = 135

 Score = 56.2 bits (134), Expect = 8e-06
 Identities = 25/70 (35%), Positives = 40/70 (57%)
 Frame = -2

Query: 231 IGVENLVLDFEDLCRLSLTCKCLYKLSNEDSLWSLMLYQDFYYDEEDGTIASKKDLYKFR 52
           IG+E   L ++DLC +S++C  L++LS++DSLW+ ++  DF         +S K LYK R
Sbjct: 15  IGIEKSSLSYKDLCCISISCHLLHRLSSDDSLWNGLISSDFPSSSASSLASSSKSLYKLR 74

Query: 51  YSQXXXXXPH 22
             +      H
Sbjct: 75  LEREKERLSH 84


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