BLASTX nr result

ID: Forsythia21_contig00060088 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Forsythia21_contig00060088
         (340 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBL94163.1| putative RNA-directed DNA polymerase (Reverse tr...    47   8e-09
emb|CCH50976.1| T4.15 [Malus x robusta]                                45   3e-08
gb|AEL30343.1| RNA-directed DNA polymerase [Arachis hypogaea]          45   2e-06
emb|CCH50954.1| T1.2 [Malus x robusta]                                 42   2e-06
gb|EMS59319.1| V-type proton ATPase subunit B 2 [Triticum urartu]      39   5e-06

>emb|CBL94163.1| putative RNA-directed DNA polymerase (Reverse transcriptase) [Malus
           domestica]
          Length = 622

 Score = 47.4 bits (111), Expect(2) = 8e-09
 Identities = 29/71 (40%), Positives = 38/71 (53%), Gaps = 4/71 (5%)
 Frame = -3

Query: 338 EVWKFLSKVDILCLIILFNEFLKIEKMPNEW--MKVETMYKNKVYKPDCKL*KSNLMSCH 165
           EVWK L +  I  LI LFN  LK +KMPNEW    +  +YKNK    +C   +   +  H
Sbjct: 190 EVWKVLGETGITWLIDLFNRILKTKKMPNEWRTSPLVPIYKNKGDVQNCMNYRGIKLMSH 249

Query: 164 EIK--GEMIEH 138
            +K    +IEH
Sbjct: 250 TMKLWERVIEH 260



 Score = 38.9 bits (89), Expect(2) = 8e-09
 Identities = 19/38 (50%), Positives = 27/38 (71%)
 Frame = -1

Query: 118 RSTMYAIYLFRILMERYEEMKQYLDIILLI*KETYDRM 5
           RSTM AIYL R LMERY + K+ L ++ +  ++ YDR+
Sbjct: 279 RSTMEAIYLLRRLMERYRDGKKDLHMVFIDLEKAYDRV 316


>emb|CCH50976.1| T4.15 [Malus x robusta]
          Length = 986

 Score = 45.4 bits (106), Expect(2) = 3e-08
 Identities = 28/71 (39%), Positives = 37/71 (52%), Gaps = 4/71 (5%)
 Frame = -3

Query: 338 EVWKFLSKVDILCLIILFNEFLKIEKMPNEW--MKVETMYKNKVYKPDCKL*KSNLMSCH 165
           EVWK L +  I  L  LFN  LK +KMPNEW    +  +YKNK    +C   +   +  H
Sbjct: 586 EVWKVLGETGITWLTDLFNRILKTKKMPNEWRTSTLVPIYKNKGDVQNCMNYRGIKLMSH 645

Query: 164 EIK--GEMIEH 138
            +K    +IEH
Sbjct: 646 TMKLWERVIEH 656



 Score = 38.9 bits (89), Expect(2) = 3e-08
 Identities = 19/38 (50%), Positives = 27/38 (71%)
 Frame = -1

Query: 118 RSTMYAIYLFRILMERYEEMKQYLDIILLI*KETYDRM 5
           RSTM AIYL R LMERY + K+ L ++ +  ++ YDR+
Sbjct: 675 RSTMEAIYLLRRLMERYRDGKKDLHMVFIDLEKAYDRV 712


>gb|AEL30343.1| RNA-directed DNA polymerase [Arachis hypogaea]
          Length = 562

 Score = 45.1 bits (105), Expect(2) = 2e-06
 Identities = 26/63 (41%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
 Frame = -3

Query: 338 EVWKFLSKVDILCLIILFNEFLKIEKMPNEWMK--VETMYKNKVYKPDCKL*KSNLMSCH 165
           EVWK L + DI  L  LFNE L+ +KMP EW K  +  +YKNK     C+  +   +  H
Sbjct: 80  EVWKDLGEKDINWLTKLFNEILRSKKMPGEWRKSTLVPIYKNKGDIQSCENYRGIKLMTH 139

Query: 164 EIK 156
            +K
Sbjct: 140 TMK 142



 Score = 33.1 bits (74), Expect(2) = 2e-06
 Identities = 16/38 (42%), Positives = 24/38 (63%)
 Frame = -1

Query: 118 RSTMYAIYLFRILMERYEEMKQYLDIILLI*KETYDRM 5
           RS   AIYL R +MERY   K+ L ++ +  ++ YDR+
Sbjct: 169 RSITEAIYLLRRMMERYRSNKRDLHMVFIDLEKAYDRV 206


>emb|CCH50954.1| T1.2 [Malus x robusta]
          Length = 554

 Score = 42.4 bits (98), Expect(2) = 2e-06
 Identities = 26/71 (36%), Positives = 37/71 (52%), Gaps = 4/71 (5%)
 Frame = -3

Query: 338 EVWKFLSKVDILCLIILFNEFLKIEKMPNEWMK--VETMYKNKVYKPDCKL*KSNLMSCH 165
           +VWK L +  I  L  LFN  LK++KM NEW    +  +YKNK    +C   +   +  H
Sbjct: 209 KVWKVLGETGITWLTDLFNRILKMKKMSNEWRNSTLVPIYKNKGDIQNCMNYRGIKLMSH 268

Query: 164 EIK--GEMIEH 138
            +K    +IEH
Sbjct: 269 TMKLLARVIEH 279



 Score = 35.4 bits (80), Expect(2) = 2e-06
 Identities = 17/37 (45%), Positives = 25/37 (67%)
 Frame = -1

Query: 115 STMYAIYLFRILMERYEEMKQYLDIILLI*KETYDRM 5
           STM AIYL R LME+Y + K  L ++ +  ++ YDR+
Sbjct: 299 STMEAIYLLRKLMEKYRDGKNDLHMVFIDLEKVYDRV 335


>gb|EMS59319.1| V-type proton ATPase subunit B 2 [Triticum urartu]
          Length = 605

 Score = 38.5 bits (88), Expect(2) = 5e-06
 Identities = 18/38 (47%), Positives = 28/38 (73%)
 Frame = -1

Query: 118 RSTMYAIYLFRILMERYEEMKQYLDIILLI*KETYDRM 5
           RSTM AI+L R LMERY E K+ L ++ +  +++YD++
Sbjct: 98  RSTMEAIFLVRQLMERYREQKKDLHMVFIDLEKSYDKI 135



 Score = 38.1 bits (87), Expect(2) = 5e-06
 Identities = 24/71 (33%), Positives = 35/71 (49%), Gaps = 4/71 (5%)
 Frame = -3

Query: 338 EVWKFLSKVDILCLIILFNEFLKIEKMPNEWMK--VETMYKNKVYKPDCKL*KSNLMSCH 165
           EVWK L  + I+ L  LFN   +  KMP EW +  +  ++KNK     C   +   +  H
Sbjct: 9   EVWKGLGDIAIVWLTKLFNLIFRANKMPEEWRRSILVPIFKNKEDVQGCTNYRGIKLMSH 68

Query: 164 EIK--GEMIEH 138
            +K    +IEH
Sbjct: 69  TMKLWERVIEH 79


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