BLASTX nr result
ID: Forsythia21_contig00056732
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Forsythia21_contig00056732
(257 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|1337118... 130 3e-28
emb|CAN65222.1| hypothetical protein VITISV_038665 [Vitis vinifera] 128 1e-27
emb|CAN61272.1| hypothetical protein VITISV_039063 [Vitis vinifera] 128 1e-27
gb|AAM08562.1|AC092749_15 Putative retroelement [Oryza sativa Ja... 123 5e-26
gb|AAP53216.2| retrotransposon protein, putative, Ty1-copia subc... 123 5e-26
gb|ABA97637.1| retrotransposon protein, putative, Ty1-copia subc... 122 7e-26
emb|CAJ09951.2| putative gag-pol polyprotein [Citrus sinensis] 122 7e-26
gb|AAT01387.1| putative polyprotein [Oryza sativa Japonica Group... 122 7e-26
gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-... 122 1e-25
ref|XP_010676254.1| PREDICTED: uncharacterized protein LOC104892... 121 2e-25
emb|CAJ86192.1| H0306F03.15 [Oryza sativa Indica Group] 121 2e-25
emb|CAJ86151.1| H0413E07.4 [Oryza sativa Indica Group] 121 2e-25
gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group] 121 2e-25
emb|CAD40121.3| OSJNBa0061C06.5 [Oryza sativa Japonica Group] 121 2e-25
gb|AAR87163.1| putative polyprotein [Oryza sativa Japonica Group... 121 2e-25
gb|AAM91886.1| putative polyprotein [Oryza sativa Japonica Group] 120 3e-25
gb|AAP54315.2| retrotransposon protein, putative, Ty1-copia subc... 120 3e-25
gb|ABA99474.1| retrotransposon protein, putative, Ty1-copia subc... 120 3e-25
ref|XP_010692517.1| PREDICTED: uncharacterized protein LOC104905... 119 8e-25
gb|AAL31093.1|AC091749_22 putative retrotransposon-related prote... 119 8e-25
>gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|133711819|gb|ABO36636.1|
copia LTR rider [Solanum lycopersicum]
Length = 1307
Score = 130 bits (327), Expect = 3e-28
Identities = 59/84 (70%), Positives = 71/84 (84%)
Frame = +2
Query: 2 LALVVQFNWELEQLDVKTAFLHGELEEVIYMSQPLGFELKEKSDHVCHLKKSVYGLKQSP 181
LA+V N ELEQLDVKTAFLHGELEE IYM+QP GF++ K +HVC LKKS+YGLKQSP
Sbjct: 889 LAIVAHQNLELEQLDVKTAFLHGELEEEIYMTQPDGFQVPGKENHVCKLKKSLYGLKQSP 948
Query: 182 RQWYKRFDSFVIRIGFRRSQYDAC 253
RQWYKRFDS+++++G+ RS YD C
Sbjct: 949 RQWYKRFDSYMVKLGYTRSSYDCC 972
>emb|CAN65222.1| hypothetical protein VITISV_038665 [Vitis vinifera]
Length = 1562
Score = 128 bits (322), Expect = 1e-27
Identities = 61/84 (72%), Positives = 69/84 (82%)
Frame = +2
Query: 2 LALVVQFNWELEQLDVKTAFLHGELEEVIYMSQPLGFELKEKSDHVCHLKKSVYGLKQSP 181
LA+V FN EL+QLDVKTAFLHG LEE IYM QP GF EKSDHVC LKKS+YGLKQSP
Sbjct: 1012 LAMVSVFNLELDQLDVKTAFLHGNLEEEIYMKQPEGFVDSEKSDHVCFLKKSLYGLKQSP 1071
Query: 182 RQWYKRFDSFVIRIGFRRSQYDAC 253
RQWYKRFD+F++ F R+QYD+C
Sbjct: 1072 RQWYKRFDAFMVSHEFMRNQYDSC 1095
>emb|CAN61272.1| hypothetical protein VITISV_039063 [Vitis vinifera]
Length = 1643
Score = 128 bits (322), Expect = 1e-27
Identities = 61/84 (72%), Positives = 69/84 (82%)
Frame = +2
Query: 2 LALVVQFNWELEQLDVKTAFLHGELEEVIYMSQPLGFELKEKSDHVCHLKKSVYGLKQSP 181
LA+V FN EL+QLDVKTAFLHG LEE IYM QP GF EKSDHVC LKKS+YGLKQSP
Sbjct: 1213 LAMVSVFNLELDQLDVKTAFLHGNLEEEIYMKQPEGFVDSEKSDHVCFLKKSLYGLKQSP 1272
Query: 182 RQWYKRFDSFVIRIGFRRSQYDAC 253
RQWYKRFD+F++ F R+QYD+C
Sbjct: 1273 RQWYKRFDAFMVSHEFMRNQYDSC 1296
>gb|AAM08562.1|AC092749_15 Putative retroelement [Oryza sativa Japonica Group]
gi|20087076|gb|AAM10749.1|AC112514_2 Putative
retroelement [Oryza sativa Japonica Group]
Length = 1225
Score = 123 bits (308), Expect = 5e-26
Identities = 57/84 (67%), Positives = 69/84 (82%)
Frame = +2
Query: 2 LALVVQFNWELEQLDVKTAFLHGELEEVIYMSQPLGFELKEKSDHVCHLKKSVYGLKQSP 181
L++V +++ELEQ+DVKTAFLHGELEE IYM QP GF + K + VC LKKS+YGLKQSP
Sbjct: 850 LSIVAMYDYELEQMDVKTAFLHGELEEDIYMEQPEGFVVPGKENLVCRLKKSLYGLKQSP 909
Query: 182 RQWYKRFDSFVIRIGFRRSQYDAC 253
RQWYKRFDSF++ FRRS YD+C
Sbjct: 910 RQWYKRFDSFMLSQKFRRSNYDSC 933
>gb|AAP53216.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1262
Score = 123 bits (308), Expect = 5e-26
Identities = 57/84 (67%), Positives = 69/84 (82%)
Frame = +2
Query: 2 LALVVQFNWELEQLDVKTAFLHGELEEVIYMSQPLGFELKEKSDHVCHLKKSVYGLKQSP 181
L++V +++ELEQ+DVKTAFLHGELEE IYM QP GF + K + VC LKKS+YGLKQSP
Sbjct: 887 LSIVAMYDYELEQMDVKTAFLHGELEEDIYMEQPEGFVVPGKENLVCRLKKSLYGLKQSP 946
Query: 182 RQWYKRFDSFVIRIGFRRSQYDAC 253
RQWYKRFDSF++ FRRS YD+C
Sbjct: 947 RQWYKRFDSFMLSQKFRRSNYDSC 970
>gb|ABA97637.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1278
Score = 122 bits (307), Expect = 7e-26
Identities = 56/83 (67%), Positives = 69/83 (83%)
Frame = +2
Query: 5 ALVVQFNWELEQLDVKTAFLHGELEEVIYMSQPLGFELKEKSDHVCHLKKSVYGLKQSPR 184
++V + ELEQLDVKTAFLHGELEE IYM QP GF + K D+VC LK+S+YGLKQSPR
Sbjct: 905 SIVAMHDLELEQLDVKTAFLHGELEEEIYMDQPEGFIVPGKEDYVCKLKRSLYGLKQSPR 964
Query: 185 QWYKRFDSFVIRIGFRRSQYDAC 253
QWYKRFDSF++ GF+RS++D+C
Sbjct: 965 QWYKRFDSFMLSHGFKRSEFDSC 987
>emb|CAJ09951.2| putative gag-pol polyprotein [Citrus sinensis]
Length = 1334
Score = 122 bits (307), Expect = 7e-26
Identities = 56/84 (66%), Positives = 69/84 (82%)
Frame = +2
Query: 2 LALVVQFNWELEQLDVKTAFLHGELEEVIYMSQPLGFELKEKSDHVCHLKKSVYGLKQSP 181
LA+V + ELEQ+DVKTAFLHG LEE I M+QP GFE K+K D+VC L KS+YGLKQSP
Sbjct: 912 LAMVALLDLELEQMDVKTAFLHGNLEEQILMAQPEGFECKDKEDYVCLLHKSLYGLKQSP 971
Query: 182 RQWYKRFDSFVIRIGFRRSQYDAC 253
RQWY+RFD F++ G+RRS+YD+C
Sbjct: 972 RQWYRRFDDFMVSKGYRRSRYDSC 995
>gb|AAT01387.1| putative polyprotein [Oryza sativa Japonica Group]
gi|48475101|gb|AAT44170.1| putative polyprotein [Oryza
sativa Japonica Group]
Length = 1175
Score = 122 bits (307), Expect = 7e-26
Identities = 56/83 (67%), Positives = 69/83 (83%)
Frame = +2
Query: 5 ALVVQFNWELEQLDVKTAFLHGELEEVIYMSQPLGFELKEKSDHVCHLKKSVYGLKQSPR 184
++V + ELEQLDVKTAFLHGELEE IYM QP GF + K D+VC LK+S+YGLKQSPR
Sbjct: 758 SIVAMHDLELEQLDVKTAFLHGELEEEIYMDQPEGFIVPGKEDYVCKLKRSLYGLKQSPR 817
Query: 185 QWYKRFDSFVIRIGFRRSQYDAC 253
QWYKRFDSF++ GF+RS++D+C
Sbjct: 818 QWYKRFDSFMLSHGFKRSEFDSC 840
>gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
Japonica Group] gi|77548751|gb|ABA91548.1|
retrotransposon protein, putative, Ty1-copia subclass
[Oryza sativa Japonica Group]
Length = 2340
Score = 122 bits (305), Expect = 1e-25
Identities = 57/84 (67%), Positives = 68/84 (80%)
Frame = +2
Query: 2 LALVVQFNWELEQLDVKTAFLHGELEEVIYMSQPLGFELKEKSDHVCHLKKSVYGLKQSP 181
L++V ++ELEQ+DVKTAFLHGELEE IYM QP GF + K + VC LKKS+YGLKQSP
Sbjct: 1121 LSIVAMHDYELEQMDVKTAFLHGELEEDIYMEQPKGFVVPGKENLVCRLKKSLYGLKQSP 1180
Query: 182 RQWYKRFDSFVIRIGFRRSQYDAC 253
RQWYKRFDSF++ FRRS YD+C
Sbjct: 1181 RQWYKRFDSFMLSQKFRRSNYDSC 1204
>ref|XP_010676254.1| PREDICTED: uncharacterized protein LOC104892119 [Beta vulgaris subsp.
vulgaris]
Length = 1947
Score = 121 bits (304), Expect = 2e-25
Identities = 59/84 (70%), Positives = 65/84 (77%)
Frame = +2
Query: 2 LALVVQFNWELEQLDVKTAFLHGELEEVIYMSQPLGFELKEKSDHVCHLKKSVYGLKQSP 181
LA+V F+ ELEQLDVKTAFLHGELEE I MSQP GF + K C LKKS+YGLKQSP
Sbjct: 1002 LAMVAHFDLELEQLDVKTAFLHGELEEDILMSQPEGFVVPGKEKFACSLKKSLYGLKQSP 1061
Query: 182 RQWYKRFDSFVIRIGFRRSQYDAC 253
RQWYKRFDSF++ GF RS YD C
Sbjct: 1062 RQWYKRFDSFMVEHGFDRSPYDCC 1085
>emb|CAJ86192.1| H0306F03.15 [Oryza sativa Indica Group]
Length = 1037
Score = 121 bits (304), Expect = 2e-25
Identities = 57/84 (67%), Positives = 68/84 (80%)
Frame = +2
Query: 2 LALVVQFNWELEQLDVKTAFLHGELEEVIYMSQPLGFELKEKSDHVCHLKKSVYGLKQSP 181
L++V ++ELEQ+DVKTAFLHGELEE IYM QP GF + K + VC LKKS+YGLKQSP
Sbjct: 672 LSIVAMHDYELEQMDVKTAFLHGELEEDIYMEQPEGFVVPGKENLVCRLKKSLYGLKQSP 731
Query: 182 RQWYKRFDSFVIRIGFRRSQYDAC 253
RQWYKRFDSF++ FRRS YD+C
Sbjct: 732 RQWYKRFDSFMLSQKFRRSNYDSC 755
>emb|CAJ86151.1| H0413E07.4 [Oryza sativa Indica Group]
Length = 1205
Score = 121 bits (304), Expect = 2e-25
Identities = 57/84 (67%), Positives = 68/84 (80%)
Frame = +2
Query: 2 LALVVQFNWELEQLDVKTAFLHGELEEVIYMSQPLGFELKEKSDHVCHLKKSVYGLKQSP 181
L++V ++ELEQ+DVKTAFLHGELEE IYM QP GF + K + VC LKKS+YGLKQSP
Sbjct: 840 LSIVAMHDYELEQMDVKTAFLHGELEEDIYMEQPEGFVVPGKENLVCRLKKSLYGLKQSP 899
Query: 182 RQWYKRFDSFVIRIGFRRSQYDAC 253
RQWYKRFDSF++ FRRS YD+C
Sbjct: 900 RQWYKRFDSFMLSQKFRRSNYDSC 923
>gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1241
Score = 121 bits (304), Expect = 2e-25
Identities = 57/84 (67%), Positives = 68/84 (80%)
Frame = +2
Query: 2 LALVVQFNWELEQLDVKTAFLHGELEEVIYMSQPLGFELKEKSDHVCHLKKSVYGLKQSP 181
L++V ++ELEQ+DVKTAFLHGELEE IYM QP GF + K + VC LKKS+YGLKQSP
Sbjct: 823 LSIVAMHDYELEQMDVKTAFLHGELEEDIYMEQPEGFVVPGKENLVCRLKKSLYGLKQSP 882
Query: 182 RQWYKRFDSFVIRIGFRRSQYDAC 253
RQWYKRFDSF++ FRRS YD+C
Sbjct: 883 RQWYKRFDSFMLSQKFRRSNYDSC 906
>emb|CAD40121.3| OSJNBa0061C06.5 [Oryza sativa Japonica Group]
Length = 621
Score = 121 bits (304), Expect = 2e-25
Identities = 57/84 (67%), Positives = 68/84 (80%)
Frame = +2
Query: 2 LALVVQFNWELEQLDVKTAFLHGELEEVIYMSQPLGFELKEKSDHVCHLKKSVYGLKQSP 181
L++V ++ELEQ+DVKTAFLHGELEE IYM QP GF + K + VC LKKS+YGLKQSP
Sbjct: 300 LSIVAMHDYELEQMDVKTAFLHGELEEDIYMEQPEGFVVPGKENLVCRLKKSLYGLKQSP 359
Query: 182 RQWYKRFDSFVIRIGFRRSQYDAC 253
RQWYKRFDSF++ FRRS YD+C
Sbjct: 360 RQWYKRFDSFMLSQKFRRSNYDSC 383
>gb|AAR87163.1| putative polyprotein [Oryza sativa Japonica Group]
gi|53370655|gb|AAU89150.1| integrase core domain
containing protein [Oryza sativa Japonica Group]
gi|108710286|gb|ABF98081.1| retrotransposon protein,
putative, Ty1-copia subclass [Oryza sativa Japonica
Group]
Length = 1322
Score = 121 bits (303), Expect = 2e-25
Identities = 55/83 (66%), Positives = 68/83 (81%)
Frame = +2
Query: 5 ALVVQFNWELEQLDVKTAFLHGELEEVIYMSQPLGFELKEKSDHVCHLKKSVYGLKQSPR 184
++V + ELEQLDVKT FLHGELEE IYM QP GF + K D+VC LK+S+YGLKQSPR
Sbjct: 905 SIVTMHDLELEQLDVKTTFLHGELEEEIYMDQPEGFIVPGKEDYVCKLKRSLYGLKQSPR 964
Query: 185 QWYKRFDSFVIRIGFRRSQYDAC 253
QWYKRFDSF++ GF+RS++D+C
Sbjct: 965 QWYKRFDSFMLSHGFKRSEFDSC 987
>gb|AAM91886.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1280
Score = 120 bits (302), Expect = 3e-25
Identities = 57/84 (67%), Positives = 67/84 (79%)
Frame = +2
Query: 2 LALVVQFNWELEQLDVKTAFLHGELEEVIYMSQPLGFELKEKSDHVCHLKKSVYGLKQSP 181
L +V ++ELEQ+DVKTAFLHGELEE IYM QP GF + K + VC LKKS+YGLKQSP
Sbjct: 949 LGIVAMHDYELEQMDVKTAFLHGELEEDIYMEQPEGFVVLGKENLVCRLKKSLYGLKQSP 1008
Query: 182 RQWYKRFDSFVIRIGFRRSQYDAC 253
RQWYKRFDSF++ FRRS YD+C
Sbjct: 1009 RQWYKRFDSFMLSQKFRRSNYDSC 1032
>gb|AAP54315.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1312
Score = 120 bits (302), Expect = 3e-25
Identities = 57/84 (67%), Positives = 67/84 (79%)
Frame = +2
Query: 2 LALVVQFNWELEQLDVKTAFLHGELEEVIYMSQPLGFELKEKSDHVCHLKKSVYGLKQSP 181
L +V ++ELEQ+DVKTAFLHGELEE IYM QP GF + K + VC LKKS+YGLKQSP
Sbjct: 949 LGIVAMHDYELEQMDVKTAFLHGELEEDIYMEQPEGFVVLGKENLVCRLKKSLYGLKQSP 1008
Query: 182 RQWYKRFDSFVIRIGFRRSQYDAC 253
RQWYKRFDSF++ FRRS YD+C
Sbjct: 1009 RQWYKRFDSFMLSQKFRRSNYDSC 1032
>gb|ABA99474.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 983
Score = 120 bits (301), Expect = 3e-25
Identities = 57/84 (67%), Positives = 67/84 (79%)
Frame = +2
Query: 2 LALVVQFNWELEQLDVKTAFLHGELEEVIYMSQPLGFELKEKSDHVCHLKKSVYGLKQSP 181
L++V ++ELEQ+DVKTAFLHGELEE IYM QP GF + K + VC LKKS+YGLKQSP
Sbjct: 656 LSIVAMHDYELEQMDVKTAFLHGELEEDIYMEQPEGFVVPGKENLVCRLKKSLYGLKQSP 715
Query: 182 RQWYKRFDSFVIRIGFRRSQYDAC 253
RQWYKRFDSF++ FRRS YD C
Sbjct: 716 RQWYKRFDSFMLSQKFRRSNYDNC 739
>ref|XP_010692517.1| PREDICTED: uncharacterized protein LOC104905624 [Beta vulgaris subsp.
vulgaris]
Length = 2676
Score = 119 bits (298), Expect = 8e-25
Identities = 56/84 (66%), Positives = 66/84 (78%)
Frame = +2
Query: 2 LALVVQFNWELEQLDVKTAFLHGELEEVIYMSQPLGFELKEKSDHVCHLKKSVYGLKQSP 181
LAL + EL QLDVKTAFLHG+LEE IYM QP GFE++ K +HVC L KS+YGLKQSP
Sbjct: 766 LALEAMEDLELHQLDVKTAFLHGDLEEEIYMKQPKGFEVEGKEEHVCRLVKSLYGLKQSP 825
Query: 182 RQWYKRFDSFVIRIGFRRSQYDAC 253
RQWY+RFDSF++ F RS YD+C
Sbjct: 826 RQWYRRFDSFMLAHEFTRSSYDSC 849
>gb|AAL31093.1|AC091749_22 putative retrotransposon-related protein [Oryza sativa Japonica
Group] gi|22655747|gb|AAN04164.1| Putative
retrotransposon protein [Oryza sativa Japonica Group]
gi|31431214|gb|AAP53029.1| retrotransposon protein,
putative, Ty1-copia subclass, expressed [Oryza sativa
Japonica Group]
Length = 1229
Score = 119 bits (298), Expect = 8e-25
Identities = 55/82 (67%), Positives = 66/82 (80%)
Frame = +2
Query: 8 LVVQFNWELEQLDVKTAFLHGELEEVIYMSQPLGFELKEKSDHVCHLKKSVYGLKQSPRQ 187
+V + ELEQLDVKT FLHGELEE IYM QP GF + K D VC LK+S+YGLKQSPRQ
Sbjct: 852 IVAMHDLELEQLDVKTIFLHGELEEEIYMDQPEGFIVPGKEDDVCKLKRSLYGLKQSPRQ 911
Query: 188 WYKRFDSFVIRIGFRRSQYDAC 253
WYKRFDSF++ GF+RS++D+C
Sbjct: 912 WYKRFDSFMLSHGFKRSEFDSC 933