BLASTX nr result

ID: Forsythia21_contig00048223 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Forsythia21_contig00048223
         (245 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_009114067.1| PREDICTED: putative ribonuclease H protein A...    58   3e-06
gb|EEE55133.1| hypothetical protein OsJ_02920 [Oryza sativa Japo...    58   3e-06
gb|AFP55557.1| non-ltr retroelement reverse transcriptase [Rosa ...    57   4e-06
ref|XP_009108245.1| PREDICTED: putative ribonuclease H protein A...    57   5e-06

>ref|XP_009114067.1| PREDICTED: putative ribonuclease H protein At1g65750 [Brassica
           rapa]
          Length = 524

 Score = 57.8 bits (138), Expect = 3e-06
 Identities = 26/51 (50%), Positives = 39/51 (76%)
 Frame = +2

Query: 89  IDNSKSLAARILQGKYFSIGDFFSATDKRDSSYLWKSLLWGRELLR*GVQW 241
           I N + L ARI++ +YF  G+ F+AT KR SSY WKSL++GR+LL+ G+++
Sbjct: 139 IQNPQCLMARIIKARYFPDGNIFTATIKRKSSYAWKSLIYGRDLLKRGMRF 189


>gb|EEE55133.1| hypothetical protein OsJ_02920 [Oryza sativa Japonica Group]
          Length = 1049

 Score = 57.8 bits (138), Expect = 3e-06
 Identities = 24/51 (47%), Positives = 38/51 (74%)
 Frame = +2

Query: 89  IDNSKSLAARILQGKYFSIGDFFSATDKRDSSYLWKSLLWGRELLR*GVQW 241
           + +  SL +R+L+G+YF   DF+SA   R +S+ W+S+L+GRELL+ GV+W
Sbjct: 597 LTDPNSLCSRVLKGRYFPDSDFWSAPKPRSASFTWRSILFGRELLKKGVRW 647


>gb|AFP55557.1| non-ltr retroelement reverse transcriptase [Rosa rugosa]
          Length = 1747

 Score = 57.4 bits (137), Expect = 4e-06
 Identities = 27/46 (58%), Positives = 31/46 (67%)
 Frame = +2

Query: 104  SLAARILQGKYFSIGDFFSATDKRDSSYLWKSLLWGRELLR*GVQW 241
            SL AR+L+ KYF   DF  A      SYLW+S LWGRELLR GV+W
Sbjct: 1166 SLVARMLKAKYFPWDDFMEAELGSSPSYLWRSFLWGRELLRKGVRW 1211


>ref|XP_009108245.1| PREDICTED: putative ribonuclease H protein At1g65750 [Brassica
           rapa]
          Length = 459

 Score = 57.0 bits (136), Expect = 5e-06
 Identities = 26/51 (50%), Positives = 39/51 (76%)
 Frame = +2

Query: 89  IDNSKSLAARILQGKYFSIGDFFSATDKRDSSYLWKSLLWGRELLR*GVQW 241
           I N + L ARI++ +YF  G+ F+AT KR SSY WKSL++GR+LL+ G+++
Sbjct: 139 IQNPQCLMARIIKARYFPDGNTFTATIKRKSSYAWKSLIYGRDLLKRGMRF 189


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