BLASTX nr result

ID: Forsythia21_contig00046306 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Forsythia21_contig00046306
         (339 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFB73912.1| polyprotein [Citrus sinensis]                           52   5e-12
gb|AFB73911.1| polyprotein [Citrus sinensis]                           51   7e-12
emb|CAN79061.1| hypothetical protein VITISV_024577 [Vitis vinifera]    58   3e-06
ref|XP_006590177.1| PREDICTED: uncharacterized protein LOC102669...    57   6e-06

>gb|AFB73912.1| polyprotein [Citrus sinensis]
          Length = 1309

 Score = 51.6 bits (122), Expect(2) = 5e-12
 Identities = 24/44 (54%), Positives = 30/44 (68%)
 Frame = +3

Query: 87  GGKFLYNIFIEYCKANGIQRQFRVNKTPHQNGVAERNNCTIVAR 218
           GG++  + F+ +CK  GIQRQF V  TP QNGVAER N T+  R
Sbjct: 552 GGEYTDSEFLAFCKQEGIQRQFTVAYTPQQNGVAERMNRTLTER 595



 Score = 45.4 bits (106), Expect(2) = 5e-12
 Identities = 21/40 (52%), Positives = 26/40 (65%)
 Frame = +2

Query: 218 RSMLKGKGVPNLYWAEPENTATYIVNRSPIEVVRKKTPNE 337
           R+ML+  G+PN +WAE   TA YIVNRSP   +  KT  E
Sbjct: 597 RAMLRTAGLPNSFWAEAAKTACYIVNRSPSTAIGLKTAME 636


>gb|AFB73911.1| polyprotein [Citrus sinensis]
          Length = 1309

 Score = 51.2 bits (121), Expect(2) = 7e-12
 Identities = 24/44 (54%), Positives = 29/44 (65%)
 Frame = +3

Query: 87  GGKFLYNIFIEYCKANGIQRQFRVNKTPHQNGVAERNNCTIVAR 218
           GG++    F+ +CK  GIQRQF V  TP QNGVAER N T+  R
Sbjct: 552 GGEYTDGEFLAFCKQEGIQRQFTVAYTPQQNGVAERMNRTLTER 595



 Score = 45.4 bits (106), Expect(2) = 7e-12
 Identities = 21/40 (52%), Positives = 26/40 (65%)
 Frame = +2

Query: 218 RSMLKGKGVPNLYWAEPENTATYIVNRSPIEVVRKKTPNE 337
           R+ML+  G+PN +WAE   TA YIVNRSP   +  KT  E
Sbjct: 597 RAMLRTAGLPNSFWAEAAKTACYIVNRSPSTAIGLKTAME 636


>emb|CAN79061.1| hypothetical protein VITISV_024577 [Vitis vinifera]
          Length = 1424

 Score = 57.8 bits (138), Expect = 3e-06
 Identities = 44/123 (35%), Positives = 62/123 (50%), Gaps = 11/123 (8%)
 Frame = +2

Query: 2   EAFSTFL*FKTLVERQSGFLIKTLRTDRWRK-VSLQY--------IY*ILQS*WHPKT-- 148
           E FS F  FK+ VE+QSG  IKTLR+DR  +  S Q+        +   L   + P+   
Sbjct: 635 EVFSIFKKFKSFVEKQSGCYIKTLRSDRGMEYTSSQFGNFCEDEGVERQLTVAYTPQQNG 694

Query: 149 V*S*QNSTXXXXXXXXXLHYCSTRSMLKGKGVPNLYWAEPENTATYIVNRSPIEVVRKKT 328
           V   +N T               ++ML  KG+P ++WAE  NTA Y++NR P + +  KT
Sbjct: 695 VVERKNQTVMEM----------AKAMLYEKGLPKIFWAEAVNTAVYLLNRCPTKALLNKT 744

Query: 329 PNE 337
           P E
Sbjct: 745 PIE 747


>ref|XP_006590177.1| PREDICTED: uncharacterized protein LOC102669657 [Glycine max]
          Length = 711

 Score = 56.6 bits (135), Expect = 6e-06
 Identities = 43/115 (37%), Positives = 55/115 (47%), Gaps = 3/115 (2%)
 Frame = +2

Query: 2   EAFSTFL*FKTLVERQSGFLIKTLRTDRWRKVSLQYI--Y*ILQS*WHPKTV*-S*QNST 172
           E F  F  FK LVE++SG  IK +R+DR  + +      Y        P TV  S Q + 
Sbjct: 443 EVFENFKKFKALVEKESGLSIKAMRSDRGGEFTSNKFNKYCEDHGIRRPLTVPRSPQQNG 502

Query: 173 XXXXXXXXXLHYCSTRSMLKGKGVPNLYWAEPENTATYIVNRSPIEVVRKKTPNE 337
                    L+    RSMLK K +P  +WAE    A Y+ NRSP   V +KTP E
Sbjct: 503 VAERKNRTILNM--VRSMLKSKKMPKEFWAEAVACAVYLTNRSPTRSVHEKTPQE 555


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