BLASTX nr result

ID: Forsythia21_contig00045577 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Forsythia21_contig00045577
         (290 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AGL91646.1| geranyl diphosphate synthase [Catharanthus roseus]      67   3e-09
ref|XP_011095406.1| PREDICTED: heterodimeric geranylgeranyl pyro...    63   9e-08
pdb|3QKC|B Chain B, Crystal Structure Of Geranyl Diphosphate Syn...    60   4e-07
gb|AAS82859.1| geranyl diphosphate synthase small subunit [Antir...    60   4e-07
ref|XP_010324311.1| PREDICTED: heterodimeric geranylgeranyl pyro...    59   1e-06

>gb|AGL91646.1| geranyl diphosphate synthase [Catharanthus roseus]
          Length = 299

 Score = 67.4 bits (163), Expect = 3e-09
 Identities = 32/62 (51%), Positives = 43/62 (69%)
 Frame = -1

Query: 290 DGSYRELELNGSNIDMGIIEYVCKKKEGELHXXXXXXXXXXXXXAEDEIEQLRKYGLYVG 111
           DG +REL++  S I+MG+IEYVCKKKEGEL+             +E+EI +LRK+GLY G
Sbjct: 187 DGQFRELDVIDSEINMGLIEYVCKKKEGELNACGAACGAILGGGSEEEIGKLRKFGLYAG 246

Query: 110 ML 105
           M+
Sbjct: 247 MI 248


>ref|XP_011095406.1| PREDICTED: heterodimeric geranylgeranyl pyrophosphate synthase
           small subunit, chloroplastic-like [Sesamum indicum]
          Length = 290

 Score = 62.8 bits (151), Expect = 9e-08
 Identities = 31/62 (50%), Positives = 39/62 (62%)
 Frame = -1

Query: 290 DGSYRELELNGSNIDMGIIEYVCKKKEGELHXXXXXXXXXXXXXAEDEIEQLRKYGLYVG 111
           DG Y+EL L+    +  +IEYVCKKKEGELH             AE+EIE LR++GLY G
Sbjct: 177 DGQYQELGLDQLGSEYDVIEYVCKKKEGELHACGAACGAILGGGAEEEIESLRRFGLYAG 236

Query: 110 ML 105
           M+
Sbjct: 237 MV 238


>pdb|3QKC|B Chain B, Crystal Structure Of Geranyl Diphosphate Synthase Small
           Subunit From Antirrhinum Majus gi|323463188|pdb|3QKC|A
           Chain A, Crystal Structure Of Geranyl Diphosphate
           Synthase Small Subunit From Antirrhinum Majus
          Length = 273

 Score = 60.5 bits (145), Expect = 4e-07
 Identities = 31/60 (51%), Positives = 38/60 (63%)
 Frame = -1

Query: 290 DGSYRELELNGSNIDMGIIEYVCKKKEGELHXXXXXXXXXXXXXAEDEIEQLRKYGLYVG 111
           +G Y EL LN  N D+ +IEYVCKKKEG LH              ED+IE+LR++GLYVG
Sbjct: 155 EGQYHELGLNQLN-DLELIEYVCKKKEGTLHACGAACGAILGGCDEDKIEKLRRFGLYVG 213


>gb|AAS82859.1| geranyl diphosphate synthase small subunit [Antirrhinum majus]
          Length = 297

 Score = 60.5 bits (145), Expect = 4e-07
 Identities = 31/60 (51%), Positives = 38/60 (63%)
 Frame = -1

Query: 290 DGSYRELELNGSNIDMGIIEYVCKKKEGELHXXXXXXXXXXXXXAEDEIEQLRKYGLYVG 111
           +G Y EL LN  N D+ +IEYVCKKKEG LH              ED+IE+LR++GLYVG
Sbjct: 187 EGQYHELGLNQLN-DLELIEYVCKKKEGTLHACGAACGAILGGCDEDKIEKLRRFGLYVG 245


>ref|XP_010324311.1| PREDICTED: heterodimeric geranylgeranyl pyrophosphate synthase
           small subunit, chloroplastic-like [Solanum lycopersicum]
          Length = 315

 Score = 59.3 bits (142), Expect = 1e-06
 Identities = 30/63 (47%), Positives = 37/63 (58%), Gaps = 1/63 (1%)
 Frame = -1

Query: 290 DGSYRELE-LNGSNIDMGIIEYVCKKKEGELHXXXXXXXXXXXXXAEDEIEQLRKYGLYV 114
           +G YRELE     N D    EYVCKKKEGE+H              ++EIE+LR YGLYV
Sbjct: 205 EGQYRELEWAQSGNEDEETFEYVCKKKEGEIHACGATCGAILGDGNDEEIERLRNYGLYV 264

Query: 113 GML 105
           G++
Sbjct: 265 GII 267


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