BLASTX nr result
ID: Forsythia21_contig00045577
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Forsythia21_contig00045577 (290 letters) Database: ./nr 69,698,275 sequences; 24,982,196,650 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AGL91646.1| geranyl diphosphate synthase [Catharanthus roseus] 67 3e-09 ref|XP_011095406.1| PREDICTED: heterodimeric geranylgeranyl pyro... 63 9e-08 pdb|3QKC|B Chain B, Crystal Structure Of Geranyl Diphosphate Syn... 60 4e-07 gb|AAS82859.1| geranyl diphosphate synthase small subunit [Antir... 60 4e-07 ref|XP_010324311.1| PREDICTED: heterodimeric geranylgeranyl pyro... 59 1e-06 >gb|AGL91646.1| geranyl diphosphate synthase [Catharanthus roseus] Length = 299 Score = 67.4 bits (163), Expect = 3e-09 Identities = 32/62 (51%), Positives = 43/62 (69%) Frame = -1 Query: 290 DGSYRELELNGSNIDMGIIEYVCKKKEGELHXXXXXXXXXXXXXAEDEIEQLRKYGLYVG 111 DG +REL++ S I+MG+IEYVCKKKEGEL+ +E+EI +LRK+GLY G Sbjct: 187 DGQFRELDVIDSEINMGLIEYVCKKKEGELNACGAACGAILGGGSEEEIGKLRKFGLYAG 246 Query: 110 ML 105 M+ Sbjct: 247 MI 248 >ref|XP_011095406.1| PREDICTED: heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic-like [Sesamum indicum] Length = 290 Score = 62.8 bits (151), Expect = 9e-08 Identities = 31/62 (50%), Positives = 39/62 (62%) Frame = -1 Query: 290 DGSYRELELNGSNIDMGIIEYVCKKKEGELHXXXXXXXXXXXXXAEDEIEQLRKYGLYVG 111 DG Y+EL L+ + +IEYVCKKKEGELH AE+EIE LR++GLY G Sbjct: 177 DGQYQELGLDQLGSEYDVIEYVCKKKEGELHACGAACGAILGGGAEEEIESLRRFGLYAG 236 Query: 110 ML 105 M+ Sbjct: 237 MV 238 >pdb|3QKC|B Chain B, Crystal Structure Of Geranyl Diphosphate Synthase Small Subunit From Antirrhinum Majus gi|323463188|pdb|3QKC|A Chain A, Crystal Structure Of Geranyl Diphosphate Synthase Small Subunit From Antirrhinum Majus Length = 273 Score = 60.5 bits (145), Expect = 4e-07 Identities = 31/60 (51%), Positives = 38/60 (63%) Frame = -1 Query: 290 DGSYRELELNGSNIDMGIIEYVCKKKEGELHXXXXXXXXXXXXXAEDEIEQLRKYGLYVG 111 +G Y EL LN N D+ +IEYVCKKKEG LH ED+IE+LR++GLYVG Sbjct: 155 EGQYHELGLNQLN-DLELIEYVCKKKEGTLHACGAACGAILGGCDEDKIEKLRRFGLYVG 213 >gb|AAS82859.1| geranyl diphosphate synthase small subunit [Antirrhinum majus] Length = 297 Score = 60.5 bits (145), Expect = 4e-07 Identities = 31/60 (51%), Positives = 38/60 (63%) Frame = -1 Query: 290 DGSYRELELNGSNIDMGIIEYVCKKKEGELHXXXXXXXXXXXXXAEDEIEQLRKYGLYVG 111 +G Y EL LN N D+ +IEYVCKKKEG LH ED+IE+LR++GLYVG Sbjct: 187 EGQYHELGLNQLN-DLELIEYVCKKKEGTLHACGAACGAILGGCDEDKIEKLRRFGLYVG 245 >ref|XP_010324311.1| PREDICTED: heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic-like [Solanum lycopersicum] Length = 315 Score = 59.3 bits (142), Expect = 1e-06 Identities = 30/63 (47%), Positives = 37/63 (58%), Gaps = 1/63 (1%) Frame = -1 Query: 290 DGSYRELE-LNGSNIDMGIIEYVCKKKEGELHXXXXXXXXXXXXXAEDEIEQLRKYGLYV 114 +G YRELE N D EYVCKKKEGE+H ++EIE+LR YGLYV Sbjct: 205 EGQYRELEWAQSGNEDEETFEYVCKKKEGEIHACGATCGAILGDGNDEEIERLRNYGLYV 264 Query: 113 GML 105 G++ Sbjct: 265 GII 267