BLASTX nr result
ID: Forsythia21_contig00041751
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Forsythia21_contig00041751
(326 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_012841404.1| PREDICTED: pentatricopeptide repeat-containi... 77 3e-12
ref|XP_011098561.1| PREDICTED: pentatricopeptide repeat-containi... 75 1e-11
ref|XP_007032420.1| Tetratricopeptide repeat (TPR)-like superfam... 74 3e-11
ref|XP_008443439.1| PREDICTED: pentatricopeptide repeat-containi... 74 4e-11
ref|XP_010091910.1| hypothetical protein L484_010474 [Morus nota... 73 7e-11
ref|XP_010554024.1| PREDICTED: pentatricopeptide repeat-containi... 73 7e-11
ref|XP_009125125.1| PREDICTED: pentatricopeptide repeat-containi... 70 6e-10
ref|XP_004147489.1| PREDICTED: pentatricopeptide repeat-containi... 69 9e-10
ref|XP_008379319.1| PREDICTED: pentatricopeptide repeat-containi... 68 3e-09
ref|XP_006338491.1| PREDICTED: pentatricopeptide repeat-containi... 68 3e-09
ref|XP_008230711.1| PREDICTED: pentatricopeptide repeat-containi... 67 4e-09
ref|XP_009602284.1| PREDICTED: pentatricopeptide repeat-containi... 67 5e-09
ref|XP_004502213.1| PREDICTED: pentatricopeptide repeat-containi... 65 1e-08
ref|XP_002276556.1| PREDICTED: pentatricopeptide repeat-containi... 65 2e-08
ref|XP_004232248.1| PREDICTED: pentatricopeptide repeat-containi... 65 2e-08
ref|XP_009795979.1| PREDICTED: pentatricopeptide repeat-containi... 65 2e-08
ref|XP_012443391.1| PREDICTED: pentatricopeptide repeat-containi... 64 5e-08
ref|XP_002870737.1| pentatricopeptide repeat-containing protein ... 64 5e-08
ref|XP_011008363.1| PREDICTED: pentatricopeptide repeat-containi... 63 7e-08
ref|XP_006431055.1| hypothetical protein CICLE_v10011224mg [Citr... 61 8e-08
>ref|XP_012841404.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39980,
chloroplastic [Erythranthe guttatus]
Length = 659
Score = 77.4 bits (189), Expect = 3e-12
Identities = 41/85 (48%), Positives = 57/85 (67%), Gaps = 2/85 (2%)
Frame = -2
Query: 250 IIVPSKNQTRNRNHVTIFAIPSSYSSTKDVWRRGQ--LSPLKRTPSQQSRRQEKEVYLDH 77
I+VP +N +N+ TIFA+ S +KDVWRR + P+ P Q RR+ ++DH
Sbjct: 32 ILVPHENIKKNKTQFTIFALSSP---SKDVWRRVHTPVPPIDTMPPQHLRRKHNLGFIDH 88
Query: 76 SVDMDELLSSIGQTENEQQLYAVMS 2
SVDMDELLSSIGQT +E +L+A++S
Sbjct: 89 SVDMDELLSSIGQTSDEHELFALLS 113
>ref|XP_011098561.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39980,
chloroplastic [Sesamum indicum]
Length = 676
Score = 75.5 bits (184), Expect = 1e-11
Identities = 53/118 (44%), Positives = 67/118 (56%), Gaps = 13/118 (11%)
Frame = -2
Query: 316 MSICPFPAIPMHVCFSI--APPL------KIIVPSKN-QTRN-RNHVTIFAIPSSYSSTK 167
MS PA MH +PPL I+VPS + + +N + H+ IFA S K
Sbjct: 1 MSTTLSPATSMHTQHHPIPSPPLLRFTLPSILVPSGDVKIQNPKPHLKIFAFSSP---AK 57
Query: 166 DVWRRGQ---LSPLKRTPSQQSRRQEKEVYLDHSVDMDELLSSIGQTENEQQLYAVMS 2
DVWRR L+P TP Q RR +LDHSVDM+ELLSSIGQT +E +LY++MS
Sbjct: 58 DVWRRKTHVPLTPTNTTPHQPHRRNRNSAFLDHSVDMEELLSSIGQTSDEHELYSLMS 115
>ref|XP_007032420.1| Tetratricopeptide repeat (TPR)-like superfamily protein [Theobroma
cacao] gi|508711449|gb|EOY03346.1| Tetratricopeptide
repeat (TPR)-like superfamily protein [Theobroma cacao]
Length = 672
Score = 74.3 bits (181), Expect = 3e-11
Identities = 43/96 (44%), Positives = 61/96 (63%), Gaps = 4/96 (4%)
Frame = -2
Query: 277 CFSIAPPLK--IIVPSKNQTRNRNHVTIFAIPSSYSS-TKDVWRRGQLSPLKRT-PSQQS 110
CFS P LK I + T+ RNH+T+ A+ SS SS TKD+WRR + +P R PSQ S
Sbjct: 21 CFSFLPLLKHQIYTTTPFTTKGRNHLTLQALSSSSSSPTKDIWRRSKTAPFYRPKPSQNS 80
Query: 109 RRQEKEVYLDHSVDMDELLSSIGQTENEQQLYAVMS 2
+LDHS+DM+EL +SI +T+N + L+ ++S
Sbjct: 81 ------TFLDHSIDMEELFASISKTQNGKDLFTLLS 110
>ref|XP_008443439.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39980,
chloroplastic [Cucumis melo]
Length = 680
Score = 73.9 bits (180), Expect = 4e-11
Identities = 40/85 (47%), Positives = 57/85 (67%), Gaps = 6/85 (7%)
Frame = -2
Query: 238 SKNQTRNRNHVTIFAIPSSYSSTKDVWRRGQLSPLKRTP------SQQSRRQEKEVYLDH 77
+K +T+ R + IF SS S++KD+WRR S T + +RRQ + +LDH
Sbjct: 34 NKIKTKPRTRIPIFRASSS-SASKDIWRRKTPSEKSTTTLLPQKYQRSARRQRESSHLDH 92
Query: 76 SVDMDELLSSIGQTENEQQLYAVMS 2
S+DMDELL+SIGQT+NEQ+LY+V+S
Sbjct: 93 SIDMDELLASIGQTKNEQELYSVLS 117
>ref|XP_010091910.1| hypothetical protein L484_010474 [Morus notabilis]
gi|587857720|gb|EXB47690.1| hypothetical protein
L484_010474 [Morus notabilis]
Length = 688
Score = 73.2 bits (178), Expect = 7e-11
Identities = 48/105 (45%), Positives = 62/105 (59%), Gaps = 14/105 (13%)
Frame = -2
Query: 274 FSIAPPLKIIVPSKNQT---------RNRNHVTIFAIPSSYSSTKDVWRRGQLSPL--KR 128
F PPL I+ S N T + + + T + +YS +KDVWRR SP +
Sbjct: 20 FFSLPPLPHIINSNNHTTLPFIFKSKKKKKNRTKPILVLAYSKSKDVWRRTSSSPSPHET 79
Query: 127 TPSQQ--SRRQEKE-VYLDHSVDMDELLSSIGQTENEQQLYAVMS 2
TPS Q RR +E YLDHSVDMDELL SI QT+NEQ+L++V+S
Sbjct: 80 TPSGQLLHRRHPREPAYLDHSVDMDELLRSIWQTQNEQELFSVLS 124
>ref|XP_010554024.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39980,
chloroplastic [Tarenaya hassleriana]
Length = 687
Score = 73.2 bits (178), Expect = 7e-11
Identities = 51/117 (43%), Positives = 70/117 (59%), Gaps = 10/117 (8%)
Frame = -2
Query: 322 VSMSICPFPAIPMHVCFSIAPP-LKIIVPSKN-QTRNRN-HVTIFAIPSSYSS---TKDV 161
VS S P P +P + P + I +P N +TR RN H+ + ++ +S S TK
Sbjct: 6 VSSSPPPLPPLPF-----VGPHHIYIFIPFSNPRTRKRNTHLLLHSVSASSSPSSPTKGA 60
Query: 160 WRRGQLSPLKRTPSQQS----RRQEKEVYLDHSVDMDELLSSIGQTENEQQLYAVMS 2
WRR +P K TPS Q RR ++ V DHSVDMDELL+SI QT+NE++LY+V+S
Sbjct: 61 WRR---TPEKATPSFQGFPRRRRYQRSVLSDHSVDMDELLASIDQTQNEEELYSVLS 114
>ref|XP_009125125.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39980,
chloroplastic [Brassica rapa]
Length = 675
Score = 70.1 bits (170), Expect = 6e-10
Identities = 44/109 (40%), Positives = 64/109 (58%), Gaps = 3/109 (2%)
Frame = -2
Query: 319 SMSICPFPAIPM---HVCFSIAPPLKIIVPSKNQTRNRNHVTIFAIPSSYSSTKDVWRRG 149
S S P+IP+ H+ SI P I P Q R+ + P S + TK+VWR+
Sbjct: 8 SSSSPSLPSIPLTRPHIHTSI--PFFTIPPESTQHRSLIFTVSASSPQS-TETKNVWRK- 63
Query: 148 QLSPLKRTPSQQSRRQEKEVYLDHSVDMDELLSSIGQTENEQQLYAVMS 2
P K T S++ RR ++ +LDH VDMDELL+SI QT NE++L++++S
Sbjct: 64 --QPEKSTSSKKHRRYQRSTFLDHKVDMDELLASIHQTHNEEELFSLLS 110
>ref|XP_004147489.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39980,
chloroplastic [Cucumis sativus]
gi|700204465|gb|KGN59598.1| hypothetical protein
Csa_3G827400 [Cucumis sativus]
Length = 680
Score = 69.3 bits (168), Expect = 9e-10
Identities = 38/85 (44%), Positives = 54/85 (63%), Gaps = 6/85 (7%)
Frame = -2
Query: 238 SKNQTRNRNHVTIFAIPSSYSSTKDVWRRGQLSPLKRTP------SQQSRRQEKEVYLDH 77
+K + + R + IF SS S++KD+WRR S T + RR + +LDH
Sbjct: 34 NKIKIKPRTRIPIFTASSS-STSKDIWRRQTPSEKSTTTLLPQKYQRSGRRPRESSHLDH 92
Query: 76 SVDMDELLSSIGQTENEQQLYAVMS 2
S+DMDELL+SIGQT+NEQ+LY+V+S
Sbjct: 93 SIDMDELLASIGQTKNEQELYSVLS 117
>ref|XP_008379319.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39980,
chloroplastic [Malus domestica]
Length = 677
Score = 67.8 bits (164), Expect = 3e-09
Identities = 40/69 (57%), Positives = 50/69 (72%), Gaps = 7/69 (10%)
Frame = -2
Query: 187 SSYSSTKDVWRRG-QLSPL---KRTPSQQSRR---QEKEVYLDHSVDMDELLSSIGQTEN 29
SS S +++VWRR QL TPS Q+RR Q+ +LDHSVDMDELLSSIGQT+N
Sbjct: 47 SSSSPSRNVWRRTPQLKTXPSPSSTPSHQNRRPRNQQGPSHLDHSVDMDELLSSIGQTQN 106
Query: 28 EQQLYAVMS 2
EQ+LY++MS
Sbjct: 107 EQELYSLMS 115
>ref|XP_006338491.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39980,
chloroplastic-like [Solanum tuberosum]
Length = 668
Score = 67.8 bits (164), Expect = 3e-09
Identities = 41/96 (42%), Positives = 57/96 (59%), Gaps = 4/96 (4%)
Frame = -2
Query: 277 CFSIAPPLKIIVPSKNQTRN--RNHVTIFAIPSSYSSTKDVWRRGQ--LSPLKRTPSQQS 110
C + P +I + R R H + ++ S+ SSTKDVWR+ SP + P +
Sbjct: 16 CLPFSQPYRITILFHYTRRKPLRTHFLLLSL-SATSSTKDVWRKTTPPFSPSQHRPYR-- 72
Query: 109 RRQEKEVYLDHSVDMDELLSSIGQTENEQQLYAVMS 2
R + +LDHSVDMD+LLSSIGQT NE +L+A+MS
Sbjct: 73 RNPQSNSFLDHSVDMDDLLSSIGQTTNEHELFALMS 108
>ref|XP_008230711.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39980,
chloroplastic [Prunus mume]
Length = 677
Score = 67.4 bits (163), Expect = 4e-09
Identities = 38/72 (52%), Positives = 48/72 (66%), Gaps = 10/72 (13%)
Frame = -2
Query: 187 SSYSSTKDVWRRGQLSPLKRTPS----------QQSRRQEKEVYLDHSVDMDELLSSIGQ 38
S+ S+TK VWRR LK TPS + R Q+ +LDHS+DMDELLSSIGQ
Sbjct: 46 SASSTTKHVWRR--TPQLKTTPSSSPSHQLTQKRHPRNQQGPSHLDHSIDMDELLSSIGQ 103
Query: 37 TENEQQLYAVMS 2
T+NEQ+LY++MS
Sbjct: 104 TQNEQELYSLMS 115
>ref|XP_009602284.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39980,
chloroplastic [Nicotiana tomentosiformis]
Length = 676
Score = 67.0 bits (162), Expect = 5e-09
Identities = 41/94 (43%), Positives = 60/94 (63%), Gaps = 9/94 (9%)
Frame = -2
Query: 256 LKIIVPSKNQTRNRNHVTIFAIPSSYSSTKDVWRR--GQLSPLK-RTPSQQS------RR 104
+ I+V + RNH + ++ S+ SS KDVWR+ +PL +TP S RR
Sbjct: 22 ITILVHYTKRKPLRNHFIVVSL-SATSSNKDVWRKTAATTTPLSLKTPPFSSPHHRPYRR 80
Query: 103 QEKEVYLDHSVDMDELLSSIGQTENEQQLYAVMS 2
+++ ++LDHSVDMD+LL SIGQT NE +L+A+MS
Sbjct: 81 RQQSLHLDHSVDMDDLLLSIGQTTNEHELFALMS 114
>ref|XP_004502213.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39980,
chloroplastic [Cicer arietinum]
Length = 669
Score = 65.5 bits (158), Expect = 1e-08
Identities = 38/77 (49%), Positives = 48/77 (62%), Gaps = 9/77 (11%)
Frame = -2
Query: 205 TIFAIPSSYS----STKDVWRRGQLSPLKRTPSQQSR-----RQEKEVYLDHSVDMDELL 53
T IP++ S S KDVW R SP T QQ R +Q + YLD +V+M+ELL
Sbjct: 27 TSITIPTTVSTKSISAKDVWTRTPRSPFSNTQQQQRRTRTQQQQHQPTYLDRTVNMNELL 86
Query: 52 SSIGQTENEQQLYAVMS 2
+SIGQT+N QQL+AVMS
Sbjct: 87 TSIGQTQNVQQLHAVMS 103
>ref|XP_002276556.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39980,
chloroplastic [Vitis vinifera]
gi|296087770|emb|CBI35026.3| unnamed protein product
[Vitis vinifera]
Length = 675
Score = 65.1 bits (157), Expect = 2e-08
Identities = 35/76 (46%), Positives = 50/76 (65%), Gaps = 2/76 (2%)
Frame = -2
Query: 223 RNRNHVTIFAIPSSYSSTKDVWRR--GQLSPLKRTPSQQSRRQEKEVYLDHSVDMDELLS 50
+ + H F + S + KDVWRR + + L + Q R+++ V+LDHSVDMDELL+
Sbjct: 41 KTQKHRACFILVSVF---KDVWRRLPDETTSLLSSSRQHRPRKQRVVHLDHSVDMDELLA 97
Query: 49 SIGQTENEQQLYAVMS 2
SI QT NEQ+LY++MS
Sbjct: 98 SISQTSNEQELYSLMS 113
>ref|XP_004232248.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39980,
chloroplastic [Solanum lycopersicum]
Length = 665
Score = 65.1 bits (157), Expect = 2e-08
Identities = 40/96 (41%), Positives = 55/96 (57%), Gaps = 4/96 (4%)
Frame = -2
Query: 277 CFSIAPPLKIIVPSKNQTRN--RNHVTIFAIPSSYSSTKDVWRRGQ--LSPLKRTPSQQS 110
C + P +I + R R H + ++ S+TKDVWR+ SP K P +
Sbjct: 16 CLPFSQPYRITILFHYTKRKPLRTHFVLLSL----SATKDVWRKTTPPFSPSKYRPYR-- 69
Query: 109 RRQEKEVYLDHSVDMDELLSSIGQTENEQQLYAVMS 2
R + +LDHSVDMD+LLSSIGQT NE +L+A+MS
Sbjct: 70 RNPQSTSFLDHSVDMDDLLSSIGQTANEHELFALMS 105
>ref|XP_009795979.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39980,
chloroplastic [Nicotiana sylvestris]
Length = 678
Score = 64.7 bits (156), Expect = 2e-08
Identities = 41/93 (44%), Positives = 59/93 (63%), Gaps = 8/93 (8%)
Frame = -2
Query: 256 LKIIVPSKNQTRNRNHVTIFAIPSSYSSTKDVWRRGQLS-PLK-RTPSQQS------RRQ 101
+ I+V + RNH + ++ S+ SS KDVWR+ + PL +TP S RR+
Sbjct: 25 ITILVHYTKRKPLRNHFIVVSL-SATSSNKDVWRKTTTTTPLSLKTPPFSSPHHRPYRRR 83
Query: 100 EKEVYLDHSVDMDELLSSIGQTENEQQLYAVMS 2
++ +LDHSVDMD+LLSSI QT NE +L+A+MS
Sbjct: 84 QQSSHLDHSVDMDDLLSSIRQTTNEHELFALMS 116
>ref|XP_012443391.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39980,
chloroplastic [Gossypium raimondii]
gi|763743900|gb|KJB11399.1| hypothetical protein
B456_001G256500 [Gossypium raimondii]
Length = 669
Score = 63.5 bits (153), Expect = 5e-08
Identities = 38/89 (42%), Positives = 54/89 (60%)
Frame = -2
Query: 268 IAPPLKIIVPSKNQTRNRNHVTIFAIPSSYSSTKDVWRRGQLSPLKRTPSQQSRRQEKEV 89
+ P + I VP +TRN H + A+ SS S KDVWRR + R + Q+ +
Sbjct: 28 LKPQIHITVPLTVKTRN--HFILQALSSS-SPAKDVWRRPGTTRFHRPKAPQN-----QT 79
Query: 88 YLDHSVDMDELLSSIGQTENEQQLYAVMS 2
+LDHSVDMDELL+SI +T+NE L+ ++S
Sbjct: 80 FLDHSVDMDELLASISKTQNENDLFILLS 108
>ref|XP_002870737.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297316573|gb|EFH46996.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 680
Score = 63.5 bits (153), Expect = 5e-08
Identities = 42/117 (35%), Positives = 63/117 (53%), Gaps = 11/117 (9%)
Frame = -2
Query: 319 SMSICPFPAIPMHVCFSIAPPLKIIVPSKNQTRNRNHVTIFAIPSSYSS------TKDVW 158
S S P +P+ I P + +P R IF + +S SS TK VW
Sbjct: 7 SSSSLSLPFLPL-----IRPHIYTCIPFSTIPEARQRNLIFKVSASSSSSSPSTQTKKVW 61
Query: 157 RRGQLSPLKRTPS-----QQSRRQEKEVYLDHSVDMDELLSSIGQTENEQQLYAVMS 2
R+ P K T S ++ RR ++ +LDH+VDMDELL+SI QT+NE++L++++S
Sbjct: 62 RK---QPEKNTTSSFQALRKHRRYQRSAFLDHNVDMDELLASIHQTQNEKELFSLLS 115
>ref|XP_011008363.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39980,
chloroplastic [Populus euphratica]
Length = 670
Score = 63.2 bits (152), Expect = 7e-08
Identities = 41/109 (37%), Positives = 62/109 (56%), Gaps = 1/109 (0%)
Frame = -2
Query: 325 AVSMSIC-PFPAIPMHVCFSIAPPLKIIVPSKNQTRNRNHVTIFAIPSSYSSTKDVWRRG 149
A SM + P P+ ++ + P +KI + + + R + Y++ KD+W R
Sbjct: 8 ATSMQVLDPLPS--SNIFLPLLPLIKIHIYTTISRKPRRRARSLLL---YAARKDIWTRN 62
Query: 148 QLSPLKRTPSQQSRRQEKEVYLDHSVDMDELLSSIGQTENEQQLYAVMS 2
+ P ++ +RQE VYLDHSVDM ELL SI QT+NEQQLY+++S
Sbjct: 63 TTT----VPYRRKQRQEP-VYLDHSVDMTELLLSISQTQNEQQLYSLLS 106
>ref|XP_006431055.1| hypothetical protein CICLE_v10011224mg [Citrus clementina]
gi|557533112|gb|ESR44295.1| hypothetical protein
CICLE_v10011224mg [Citrus clementina]
Length = 677
Score = 60.8 bits (146), Expect(2) = 8e-08
Identities = 32/69 (46%), Positives = 47/69 (68%)
Frame = -2
Query: 208 VTIFAIPSSYSSTKDVWRRGQLSPLKRTPSQQSRRQEKEVYLDHSVDMDELLSSIGQTEN 29
VT + SS S +KD+WRR +P K T + ++ V+LDHSVDM+ELL SI +T+N
Sbjct: 47 VTASSSSSSPSKSKDIWRR---TPDKTTKYYRHPNKKVPVHLDHSVDMNELLKSISETQN 103
Query: 28 EQQLYAVMS 2
E +L+A++S
Sbjct: 104 EHELFALLS 112
Score = 21.9 bits (45), Expect(2) = 8e-08
Identities = 9/22 (40%), Positives = 14/22 (63%)
Frame = -3
Query: 282 TYVSPLLLH*KLSYHPKTKPEI 217
+++ PLL K ++P TKP I
Sbjct: 21 SFLLPLLSLNKSQFYPSTKPRI 42