BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Forsythia21_contig00041357
         (1394 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011083427.1| PREDICTED: RNA pseudouridine synthase 2, chl...   484   e-134
ref|XP_012829598.1| PREDICTED: RNA pseudouridine synthase 2, chl...   473   e-130
ref|XP_009798870.1| PREDICTED: RNA pseudouridine synthase 2, chl...   473   e-130
gb|EYU17562.1| hypothetical protein MIMGU_mgv1a006781mg [Erythra...   472   e-130
ref|XP_006342081.1| PREDICTED: RNA pseudouridine synthase 2, chl...   470   e-129
ref|XP_012829599.1| PREDICTED: RNA pseudouridine synthase 2, chl...   469   e-129
emb|CDP07347.1| unnamed protein product [Coffea canephora]            468   e-129
ref|XP_004238386.1| PREDICTED: RNA pseudouridine synthase 2, chl...   468   e-129
ref|XP_009620048.1| PREDICTED: RNA pseudouridine synthase 2, chl...   467   e-128
ref|XP_010320443.1| PREDICTED: RNA pseudouridine synthase 2, chl...   466   e-128
ref|XP_010241328.1| PREDICTED: RNA pseudouridine synthase 2, chl...   466   e-128
ref|XP_010241330.1| PREDICTED: RNA pseudouridine synthase 2, chl...   464   e-128
ref|XP_010241329.1| PREDICTED: RNA pseudouridine synthase 2, chl...   464   e-128
ref|XP_003634352.1| PREDICTED: RNA pseudouridine synthase 2, chl...   460   e-126
ref|XP_010320444.1| PREDICTED: RNA pseudouridine synthase 2, chl...   450   e-123
ref|XP_010533976.1| PREDICTED: RNA pseudouridine synthase 2, chl...   449   e-123
ref|XP_010935174.1| PREDICTED: RNA pseudouridine synthase 2, chl...   447   e-123
ref|XP_007017900.1| Pseudouridine synthase family protein isofor...   447   e-123
gb|KCW70505.1| hypothetical protein EUGRSUZ_F03712 [Eucalyptus g...   443   e-121
ref|XP_010063294.1| PREDICTED: RNA pseudouridine synthase 2, chl...   442   e-121

>ref|XP_011083427.1| PREDICTED: RNA pseudouridine synthase 2, chloroplastic [Sesamum
            indicum]
          Length = 445

 Score =  484 bits (1247), Expect = e-134
 Identities = 247/332 (74%), Positives = 275/332 (82%), Gaps = 2/332 (0%)
 Frame = -3

Query: 1392 GRVVSKVSHVVREGDAVNCTIAELQPLRAEAEDIPLDIVYEDEHLLVVNKAA--HMVVHP 1219
            G V+ KVSHVVR+GD VNCTIAELQPLRAEAEDIPLDIVYEDEH+LVVNK     +VVHP
Sbjct: 106  GHVIDKVSHVVRDGDVVNCTIAELQPLRAEAEDIPLDIVYEDEHVLVVNKPVLQFVVVHP 165

Query: 1218 APGNATGTLVNGILHHCRLPTVSFINPEVLXXXXXXXXXEFSTLSTDQDYNGGIGSGLCE 1039
            APGNA+GTLVNGIL HCRL TV  +NPE           E S  S DQ  N GIGSGL E
Sbjct: 166  APGNASGTLVNGILRHCRLSTVC-LNPEAQPEIVDDSEDEVSAFSVDQGENVGIGSGLYE 224

Query: 1038 AYVRPGIVHRLDKGTSGLLVVAKDENSHAHLAEQFKKHTIKRVYVSLTCGVPSPVCERIE 859
            + VRPGIVHRLDKGTSGLLVVAKDE+SHA LAEQFK+ TIKRVYVSLTCGVPSP   RI+
Sbjct: 225  SSVRPGIVHRLDKGTSGLLVVAKDEHSHACLAEQFKERTIKRVYVSLTCGVPSPATGRID 284

Query: 858  IPIGRDLNNRLRMSAAPGLNTRQKARYAASRYKVIEILAHGGCALVEWRLETGRTHQIRA 679
            +PIGRD NNR+RM A PG  T  KAR+A SRYKVIEILA GGCALVEWRLETGRTHQIRA
Sbjct: 285  VPIGRDANNRIRMIAIPGSATHGKARHAVSRYKVIEILAGGGCALVEWRLETGRTHQIRA 344

Query: 678  HAKYIGVPLLGDELYGGTKSMALSLLQSRNPSSFHRQIEQLVAKIERPCLHALSLGFRHP 499
            HAKYIGVPLLGD++YGGTKSMA+SLLQS+NP + HRQ+ QLV +++RPCLHA SLGFRHP
Sbjct: 345  HAKYIGVPLLGDDVYGGTKSMAMSLLQSKNPPTTHRQLLQLVERLDRPCLHAFSLGFRHP 404

Query: 498  NTGENLHFSKLPPADFAETLSQLRDISTEKVT 403
            N+GE+L FS++PPADFAE L +LRDI  +K T
Sbjct: 405  NSGEDLRFSQIPPADFAEILDRLRDIGAKKGT 436


>ref|XP_012829598.1| PREDICTED: RNA pseudouridine synthase 2, chloroplastic isoform X1
            [Erythranthe guttatus] gi|604297299|gb|EYU17563.1|
            hypothetical protein MIMGU_mgv1a006781mg [Erythranthe
            guttata]
          Length = 422

 Score =  473 bits (1218), Expect = e-130
 Identities = 242/329 (73%), Positives = 270/329 (82%)
 Frame = -3

Query: 1392 GRVVSKVSHVVREGDAVNCTIAELQPLRAEAEDIPLDIVYEDEHLLVVNKAAHMVVHPAP 1213
            G V+SKVSHVVR+GD+VNCTIAELQPLRAE E+IPLDIVYED+HLLVVNK AHMVVHPAP
Sbjct: 106  GHVISKVSHVVRDGDSVNCTIAELQPLRAEPENIPLDIVYEDDHLLVVNKPAHMVVHPAP 165

Query: 1212 GNATGTLVNGILHHCRLPTVSFINPEVLXXXXXXXXXEFSTLSTDQDYNGGIGSGLCEAY 1033
            GNA GTLVNGILHHCRL TV F NPE L                D D          E+ 
Sbjct: 166  GNANGTLVNGILHHCRLSTVCF-NPESLPDNID-----------DDDSIDEATVFPSESS 213

Query: 1032 VRPGIVHRLDKGTSGLLVVAKDENSHAHLAEQFKKHTIKRVYVSLTCGVPSPVCERIEIP 853
            VRPGIVHRLDKGTSGLLVVAKDE+SH+HLAEQFKKHT+KRVYVSLTCGVPSPV  R++IP
Sbjct: 214  VRPGIVHRLDKGTSGLLVVAKDEHSHSHLAEQFKKHTVKRVYVSLTCGVPSPVSGRVDIP 273

Query: 852  IGRDLNNRLRMSAAPGLNTRQKARYAASRYKVIEILAHGGCALVEWRLETGRTHQIRAHA 673
            IGRD NNR+RM A PG     KAR+A SRYKV+EILA GGCALVEWRLETGRTHQIRAHA
Sbjct: 274  IGRDSNNRIRMVAIPGSALHGKARHAVSRYKVVEILAGGGCALVEWRLETGRTHQIRAHA 333

Query: 672  KYIGVPLLGDELYGGTKSMALSLLQSRNPSSFHRQIEQLVAKIERPCLHALSLGFRHPNT 493
            KY+G+PLLGD++YGGTK MALS LQS+N SS++ QI QLVAK+ERP LHALSLGFRHP+ 
Sbjct: 334  KYLGIPLLGDDVYGGTKHMALSQLQSKNSSSYYGQIHQLVAKLERPSLHALSLGFRHPHK 393

Query: 492  GENLHFSKLPPADFAETLSQLRDISTEKV 406
            GE+LHFS++PP DFAE L  LR+IS+EKV
Sbjct: 394  GEDLHFSQMPPFDFAEILDCLRNISSEKV 422


>ref|XP_009798870.1| PREDICTED: RNA pseudouridine synthase 2, chloroplastic [Nicotiana
            sylvestris]
          Length = 431

 Score =  473 bits (1217), Expect = e-130
 Identities = 240/329 (72%), Positives = 269/329 (81%)
 Frame = -3

Query: 1392 GRVVSKVSHVVREGDAVNCTIAELQPLRAEAEDIPLDIVYEDEHLLVVNKAAHMVVHPAP 1213
            GRV  KVSH V+ GD VNCTIA+L+PLRAE EDIPLDIVYED+H+LVVNK AHMVVHPAP
Sbjct: 102  GRVTDKVSHTVKGGDKVNCTIADLKPLRAEPEDIPLDIVYEDDHVLVVNKPAHMVVHPAP 161

Query: 1212 GNATGTLVNGILHHCRLPTVSFINPEVLXXXXXXXXXEFSTLSTDQDYNGGIGSGLCEAY 1033
            GNATGTLV+GILHHC LPTVSF   EVL         E +  STDQ   G   S +CE  
Sbjct: 162  GNATGTLVSGILHHCSLPTVSFPGEEVLSDVEDDSDDELNLFSTDQSPYGVDSSVVCEPS 221

Query: 1032 VRPGIVHRLDKGTSGLLVVAKDENSHAHLAEQFKKHTIKRVYVSLTCGVPSPVCERIEIP 853
            VRPGIVHRLDKGTSGLLVVAK E S A+LAEQFKKHTIKRVYVS+TCGVP+ V  RI+IP
Sbjct: 222  VRPGIVHRLDKGTSGLLVVAKTEQSLANLAEQFKKHTIKRVYVSITCGVPTSVSGRIDIP 281

Query: 852  IGRDLNNRLRMSAAPGLNTRQKARYAASRYKVIEILAHGGCALVEWRLETGRTHQIRAHA 673
            IGRD NNR+RM A PG +   +AR AASRYKVIE LA GG ALVEWRLETGRTHQIRAHA
Sbjct: 282  IGRDSNNRIRMIAIPGSHKGGRARNAASRYKVIEKLAGGGSALVEWRLETGRTHQIRAHA 341

Query: 672  KYIGVPLLGDELYGGTKSMALSLLQSRNPSSFHRQIEQLVAKIERPCLHALSLGFRHPNT 493
            KY+G+PLLGDE+YGGTK+MALSLLQ + P   H ++ QL++ IERPCLHAL+LGFRHP T
Sbjct: 342  KYLGIPLLGDEVYGGTKNMALSLLQPKTPPRSHGKLSQLISGIERPCLHALTLGFRHPYT 401

Query: 492  GENLHFSKLPPADFAETLSQLRDISTEKV 406
            GEN+HF++LPPADFAE LS+LR ISTEKV
Sbjct: 402  GENIHFTRLPPADFAEVLSELRAISTEKV 430


>gb|EYU17562.1| hypothetical protein MIMGU_mgv1a006781mg [Erythranthe guttata]
          Length = 432

 Score =  472 bits (1215), Expect = e-130
 Identities = 241/329 (73%), Positives = 270/329 (82%)
 Frame = -3

Query: 1392 GRVVSKVSHVVREGDAVNCTIAELQPLRAEAEDIPLDIVYEDEHLLVVNKAAHMVVHPAP 1213
            G V+SKVSHVVR+GD+VNCTIAELQPLRAE E+IPLDIVYED+HLLVVNK AHMVVHPAP
Sbjct: 106  GHVISKVSHVVRDGDSVNCTIAELQPLRAEPENIPLDIVYEDDHLLVVNKPAHMVVHPAP 165

Query: 1212 GNATGTLVNGILHHCRLPTVSFINPEVLXXXXXXXXXEFSTLSTDQDYNGGIGSGLCEAY 1033
            GNA GTLVNGILHHCRL TV F NPE L                D D          E+ 
Sbjct: 166  GNANGTLVNGILHHCRLSTVCF-NPESLPDNID-----------DDDSIDEATVFPSESS 213

Query: 1032 VRPGIVHRLDKGTSGLLVVAKDENSHAHLAEQFKKHTIKRVYVSLTCGVPSPVCERIEIP 853
            VRPGIVHRLDKGTSGLLVVAKDE+SH+HLAEQFKKHT+KRVYVSLTCGVPSPV  R++IP
Sbjct: 214  VRPGIVHRLDKGTSGLLVVAKDEHSHSHLAEQFKKHTVKRVYVSLTCGVPSPVSGRVDIP 273

Query: 852  IGRDLNNRLRMSAAPGLNTRQKARYAASRYKVIEILAHGGCALVEWRLETGRTHQIRAHA 673
            IGRD NNR+RM A PG     KAR+A SRYKV+EILA GGCALVEWRLETGRTHQIRAHA
Sbjct: 274  IGRDSNNRIRMVAIPGSALHGKARHAVSRYKVVEILAGGGCALVEWRLETGRTHQIRAHA 333

Query: 672  KYIGVPLLGDELYGGTKSMALSLLQSRNPSSFHRQIEQLVAKIERPCLHALSLGFRHPNT 493
            KY+G+PLLGD++YGGTK MALS LQS+N SS++ QI QLVAK+ERP LHALSLGFRHP+ 
Sbjct: 334  KYLGIPLLGDDVYGGTKHMALSQLQSKNSSSYYGQIHQLVAKLERPSLHALSLGFRHPHK 393

Query: 492  GENLHFSKLPPADFAETLSQLRDISTEKV 406
            GE+LHFS++PP DFAE L  LR+IS+EK+
Sbjct: 394  GEDLHFSQMPPFDFAEILDCLRNISSEKM 422


>ref|XP_006342081.1| PREDICTED: RNA pseudouridine synthase 2, chloroplastic-like [Solanum
            tuberosum]
          Length = 431

 Score =  470 bits (1209), Expect = e-129
 Identities = 232/329 (70%), Positives = 272/329 (82%)
 Frame = -3

Query: 1392 GRVVSKVSHVVREGDAVNCTIAELQPLRAEAEDIPLDIVYEDEHLLVVNKAAHMVVHPAP 1213
            GRV  KVSH+V+ GD V+CTIA+L+PLRAE EDIPLDIV+EDEH+LVVNK AHMVVHPAP
Sbjct: 102  GRVTDKVSHMVKGGDKVDCTIADLKPLRAEPEDIPLDIVFEDEHVLVVNKPAHMVVHPAP 161

Query: 1212 GNATGTLVNGILHHCRLPTVSFINPEVLXXXXXXXXXEFSTLSTDQDYNGGIGSGLCEAY 1033
            GNATGTLV+GILHHC LPT+SF+  EVL         E +  S ++  N    S +CE+ 
Sbjct: 162  GNATGTLVSGILHHCSLPTISFLGEEVLSDAEDASDDELNVFSGNRSPNYDDSSVMCESS 221

Query: 1032 VRPGIVHRLDKGTSGLLVVAKDENSHAHLAEQFKKHTIKRVYVSLTCGVPSPVCERIEIP 853
            VRPGIVHRLDKGTSGLLVVAK+ENS A LAEQFKKHTIKRVYVS+TCGVP+ V  R++IP
Sbjct: 222  VRPGIVHRLDKGTSGLLVVAKNENSLASLAEQFKKHTIKRVYVSITCGVPASVAGRVDIP 281

Query: 852  IGRDLNNRLRMSAAPGLNTRQKARYAASRYKVIEILAHGGCALVEWRLETGRTHQIRAHA 673
            IGRD NNR+RM+A PG     K+R+A SRYKVIE LA GG ALVEWRLETGRTHQIRAHA
Sbjct: 282  IGRDSNNRIRMAAIPGTPKSGKSRHAVSRYKVIEKLARGGSALVEWRLETGRTHQIRAHA 341

Query: 672  KYIGVPLLGDELYGGTKSMALSLLQSRNPSSFHRQIEQLVAKIERPCLHALSLGFRHPNT 493
            KY+G+PL+GDE+YGGTK+MALSLLQ + P  FH ++ QLV++I+RPCLHAL+LGFRHP T
Sbjct: 342  KYLGIPLMGDEVYGGTKNMALSLLQPKTPPMFHGKLSQLVSQIDRPCLHALTLGFRHPFT 401

Query: 492  GENLHFSKLPPADFAETLSQLRDISTEKV 406
            GEN+HF++LPP DFAE LS LR I+TEKV
Sbjct: 402  GENIHFTRLPPPDFAEILSYLRAINTEKV 430


>ref|XP_012829599.1| PREDICTED: RNA pseudouridine synthase 2, chloroplastic isoform X2
            [Erythranthe guttatus]
          Length = 322

 Score =  469 bits (1207), Expect = e-129
 Identities = 241/327 (73%), Positives = 268/327 (81%)
 Frame = -3

Query: 1386 VVSKVSHVVREGDAVNCTIAELQPLRAEAEDIPLDIVYEDEHLLVVNKAAHMVVHPAPGN 1207
            VV KVSHVVR+GD+VNCTIAELQPLRAE E+IPLDIVYED+HLLVVNK AHMVVHPAPGN
Sbjct: 8    VVLKVSHVVRDGDSVNCTIAELQPLRAEPENIPLDIVYEDDHLLVVNKPAHMVVHPAPGN 67

Query: 1206 ATGTLVNGILHHCRLPTVSFINPEVLXXXXXXXXXEFSTLSTDQDYNGGIGSGLCEAYVR 1027
            A GTLVNGILHHCRL TV F NPE L                D D          E+ VR
Sbjct: 68   ANGTLVNGILHHCRLSTVCF-NPESLPDNID-----------DDDSIDEATVFPSESSVR 115

Query: 1026 PGIVHRLDKGTSGLLVVAKDENSHAHLAEQFKKHTIKRVYVSLTCGVPSPVCERIEIPIG 847
            PGIVHRLDKGTSGLLVVAKDE+SH+HLAEQFKKHT+KRVYVSLTCGVPSPV  R++IPIG
Sbjct: 116  PGIVHRLDKGTSGLLVVAKDEHSHSHLAEQFKKHTVKRVYVSLTCGVPSPVSGRVDIPIG 175

Query: 846  RDLNNRLRMSAAPGLNTRQKARYAASRYKVIEILAHGGCALVEWRLETGRTHQIRAHAKY 667
            RD NNR+RM A PG     KAR+A SRYKV+EILA GGCALVEWRLETGRTHQIRAHAKY
Sbjct: 176  RDSNNRIRMVAIPGSALHGKARHAVSRYKVVEILAGGGCALVEWRLETGRTHQIRAHAKY 235

Query: 666  IGVPLLGDELYGGTKSMALSLLQSRNPSSFHRQIEQLVAKIERPCLHALSLGFRHPNTGE 487
            +G+PLLGD++YGGTK MALS LQS+N SS++ QI QLVAK+ERP LHALSLGFRHP+ GE
Sbjct: 236  LGIPLLGDDVYGGTKHMALSQLQSKNSSSYYGQIHQLVAKLERPSLHALSLGFRHPHKGE 295

Query: 486  NLHFSKLPPADFAETLSQLRDISTEKV 406
            +LHFS++PP DFAE L  LR+IS+EKV
Sbjct: 296  DLHFSQMPPFDFAEILDCLRNISSEKV 322


>emb|CDP07347.1| unnamed protein product [Coffea canephora]
          Length = 442

 Score =  468 bits (1205), Expect = e-129
 Identities = 232/330 (70%), Positives = 263/330 (79%)
 Frame = -3

Query: 1392 GRVVSKVSHVVREGDAVNCTIAELQPLRAEAEDIPLDIVYEDEHLLVVNKAAHMVVHPAP 1213
            GR+++KVSH+VR GD VNCTI+ELQ LRAE EDIPLDIVYED+HLLVVNK AHMVVHPAP
Sbjct: 108  GRIINKVSHMVRGGDKVNCTISELQQLRAEPEDIPLDIVYEDDHLLVVNKPAHMVVHPAP 167

Query: 1212 GNATGTLVNGILHHCRLPTVSFINPEVLXXXXXXXXXEFSTLSTDQDYNGGIGSGLCEAY 1033
            GN +GTLVNGILHHC LP +S  + EV          EF         NGG  S   EA 
Sbjct: 168  GNTSGTLVNGILHHCSLPMLSLASEEVHLEPEDASDDEFIAFPRAPKDNGGASSRTSEAS 227

Query: 1032 VRPGIVHRLDKGTSGLLVVAKDENSHAHLAEQFKKHTIKRVYVSLTCGVPSPVCERIEIP 853
            +RPGIVHRLDKGTSGLLVVAKDE+SH+HLAEQFK  TIKRVYVSLTCGVPSPV  R++IP
Sbjct: 228  IRPGIVHRLDKGTSGLLVVAKDEHSHSHLAEQFKNRTIKRVYVSLTCGVPSPVSGRVDIP 287

Query: 852  IGRDLNNRLRMSAAPGLNTRQKARYAASRYKVIEILAHGGCALVEWRLETGRTHQIRAHA 673
            +GRD NNR+RM+   G    QK R AASRY V+E+LA GG ALVEW+LETGRTHQIR HA
Sbjct: 288  VGRDSNNRIRMAVFDGSTHSQKTRNAASRYSVVEVLAGGGSALVEWKLETGRTHQIRVHA 347

Query: 672  KYIGVPLLGDELYGGTKSMALSLLQSRNPSSFHRQIEQLVAKIERPCLHALSLGFRHPNT 493
            KY+GVPL+GDELYGGTK MALSLLQ R PSSF   ++QL+ K+ERPCLHALSLGF HP T
Sbjct: 348  KYMGVPLMGDELYGGTKGMALSLLQPRTPSSFRENLQQLICKLERPCLHALSLGFTHPYT 407

Query: 492  GENLHFSKLPPADFAETLSQLRDISTEKVT 403
             EN+HFS++PPADFAE L+QLRDI  EKV+
Sbjct: 408  LENMHFSQMPPADFAEILTQLRDIRAEKVS 437


>ref|XP_004238386.1| PREDICTED: RNA pseudouridine synthase 2, chloroplastic isoform X1
            [Solanum lycopersicum]
          Length = 436

 Score =  468 bits (1205), Expect = e-129
 Identities = 233/330 (70%), Positives = 272/330 (82%)
 Frame = -3

Query: 1392 GRVVSKVSHVVREGDAVNCTIAELQPLRAEAEDIPLDIVYEDEHLLVVNKAAHMVVHPAP 1213
            GRV  KVSH+V+ GD V+CTIA+L+PLRAE EDIPLDIVYEDEH+LVVNK AHMVVHPAP
Sbjct: 102  GRVTDKVSHMVKGGDKVDCTIADLKPLRAEPEDIPLDIVYEDEHVLVVNKPAHMVVHPAP 161

Query: 1212 GNATGTLVNGILHHCRLPTVSFINPEVLXXXXXXXXXEFSTLSTDQDYNGGIGSGLCEAY 1033
            GNATGTLV+GILHHC LPTVSF   EVL         E +  S ++  N    S +CE+ 
Sbjct: 162  GNATGTLVSGILHHCSLPTVSFPGEEVLSDGEDASDDELNIFSPNRSPNYDDSSVMCESS 221

Query: 1032 VRPGIVHRLDKGTSGLLVVAKDENSHAHLAEQFKKHTIKRVYVSLTCGVPSPVCERIEIP 853
            VRPGIVHRLDKGTSGLLVVAK+E+S A LAEQFKKHTIKRVYVS+TCGVP+ V  R++IP
Sbjct: 222  VRPGIVHRLDKGTSGLLVVAKNEHSLADLAEQFKKHTIKRVYVSITCGVPASVAGRVDIP 281

Query: 852  IGRDLNNRLRMSAAPGLNTRQKARYAASRYKVIEILAHGGCALVEWRLETGRTHQIRAHA 673
            IGRD NNR+RM+A PG     K+R+A SRYKVIE LA GG ALVEWRLETGRTHQIRAHA
Sbjct: 282  IGRDSNNRIRMAAIPGTPKSGKSRHAVSRYKVIEKLAGGGSALVEWRLETGRTHQIRAHA 341

Query: 672  KYIGVPLLGDELYGGTKSMALSLLQSRNPSSFHRQIEQLVAKIERPCLHALSLGFRHPNT 493
            K++G+PL+GDE+YGGTK+MALSLLQ + P  FH ++ QLV++I+RPCLHAL+LGFRHP T
Sbjct: 342  KHLGIPLMGDEVYGGTKNMALSLLQPKTPPMFHGELSQLVSQIDRPCLHALTLGFRHPFT 401

Query: 492  GENLHFSKLPPADFAETLSQLRDISTEKVT 403
            GEN+HF++LPP DFAE LS+LR I TEKVT
Sbjct: 402  GENIHFTRLPPPDFAEILSELRAIKTEKVT 431


>ref|XP_009620048.1| PREDICTED: RNA pseudouridine synthase 2, chloroplastic [Nicotiana
            tomentosiformis]
          Length = 431

 Score =  467 bits (1201), Expect = e-128
 Identities = 235/329 (71%), Positives = 266/329 (80%)
 Frame = -3

Query: 1392 GRVVSKVSHVVREGDAVNCTIAELQPLRAEAEDIPLDIVYEDEHLLVVNKAAHMVVHPAP 1213
            GRV  KVSH V+ GD VNCTIA+L+PLRAE EDIPLDIVYED+H+LVVNK AHMVVHPAP
Sbjct: 102  GRVTDKVSHTVKGGDKVNCTIADLKPLRAEPEDIPLDIVYEDDHVLVVNKPAHMVVHPAP 161

Query: 1212 GNATGTLVNGILHHCRLPTVSFINPEVLXXXXXXXXXEFSTLSTDQDYNGGIGSGLCEAY 1033
            GN TGTLV+GILHHC LPT+SF   EVL         E +  S DQ  NG   S + E  
Sbjct: 162  GNVTGTLVSGILHHCSLPTISFPGEEVLSDVEDASGDELNMFSADQSPNGVDASRMYEPS 221

Query: 1032 VRPGIVHRLDKGTSGLLVVAKDENSHAHLAEQFKKHTIKRVYVSLTCGVPSPVCERIEIP 853
            +RPGIVHRLDKGTSGLLVVAK E S A+LAEQFKKHTIKRVYVS+TCGVP+ V  RI+IP
Sbjct: 222  IRPGIVHRLDKGTSGLLVVAKTEQSLANLAEQFKKHTIKRVYVSITCGVPTSVSGRIDIP 281

Query: 852  IGRDLNNRLRMSAAPGLNTRQKARYAASRYKVIEILAHGGCALVEWRLETGRTHQIRAHA 673
            IGRD NNR+RM A PG +   +AR AASRYKVIE LA GG ALVEWRLETGRTHQIRAHA
Sbjct: 282  IGRDSNNRIRMVAIPGSHKGGRARNAASRYKVIEKLAGGGSALVEWRLETGRTHQIRAHA 341

Query: 672  KYIGVPLLGDELYGGTKSMALSLLQSRNPSSFHRQIEQLVAKIERPCLHALSLGFRHPNT 493
            KY+G+PLLGDE+YGGTK+MALSLLQ + P   H  + QL++ IERPCLHAL+LGFRHP T
Sbjct: 342  KYLGIPLLGDEVYGGTKNMALSLLQPKTPPRSHGNLSQLISGIERPCLHALTLGFRHPYT 401

Query: 492  GENLHFSKLPPADFAETLSQLRDISTEKV 406
            GEN+HF++LPPADFAE L++LR ISTEKV
Sbjct: 402  GENIHFTRLPPADFAEVLTELRAISTEKV 430


>ref|XP_010320443.1| PREDICTED: RNA pseudouridine synthase 2, chloroplastic isoform X2
            [Solanum lycopersicum]
          Length = 431

 Score =  466 bits (1200), Expect = e-128
 Identities = 232/329 (70%), Positives = 271/329 (82%)
 Frame = -3

Query: 1392 GRVVSKVSHVVREGDAVNCTIAELQPLRAEAEDIPLDIVYEDEHLLVVNKAAHMVVHPAP 1213
            GRV  KVSH+V+ GD V+CTIA+L+PLRAE EDIPLDIVYEDEH+LVVNK AHMVVHPAP
Sbjct: 102  GRVTDKVSHMVKGGDKVDCTIADLKPLRAEPEDIPLDIVYEDEHVLVVNKPAHMVVHPAP 161

Query: 1212 GNATGTLVNGILHHCRLPTVSFINPEVLXXXXXXXXXEFSTLSTDQDYNGGIGSGLCEAY 1033
            GNATGTLV+GILHHC LPTVSF   EVL         E +  S ++  N    S +CE+ 
Sbjct: 162  GNATGTLVSGILHHCSLPTVSFPGEEVLSDGEDASDDELNIFSPNRSPNYDDSSVMCESS 221

Query: 1032 VRPGIVHRLDKGTSGLLVVAKDENSHAHLAEQFKKHTIKRVYVSLTCGVPSPVCERIEIP 853
            VRPGIVHRLDKGTSGLLVVAK+E+S A LAEQFKKHTIKRVYVS+TCGVP+ V  R++IP
Sbjct: 222  VRPGIVHRLDKGTSGLLVVAKNEHSLADLAEQFKKHTIKRVYVSITCGVPASVAGRVDIP 281

Query: 852  IGRDLNNRLRMSAAPGLNTRQKARYAASRYKVIEILAHGGCALVEWRLETGRTHQIRAHA 673
            IGRD NNR+RM+A PG     K+R+A SRYKVIE LA GG ALVEWRLETGRTHQIRAHA
Sbjct: 282  IGRDSNNRIRMAAIPGTPKSGKSRHAVSRYKVIEKLAGGGSALVEWRLETGRTHQIRAHA 341

Query: 672  KYIGVPLLGDELYGGTKSMALSLLQSRNPSSFHRQIEQLVAKIERPCLHALSLGFRHPNT 493
            K++G+PL+GDE+YGGTK+MALSLLQ + P  FH ++ QLV++I+RPCLHAL+LGFRHP T
Sbjct: 342  KHLGIPLMGDEVYGGTKNMALSLLQPKTPPMFHGELSQLVSQIDRPCLHALTLGFRHPFT 401

Query: 492  GENLHFSKLPPADFAETLSQLRDISTEKV 406
            GEN+HF++LPP DFAE LS+LR I TEKV
Sbjct: 402  GENIHFTRLPPPDFAEILSELRAIKTEKV 430


>ref|XP_010241328.1| PREDICTED: RNA pseudouridine synthase 2, chloroplastic isoform X1
            [Nelumbo nucifera]
          Length = 471

 Score =  466 bits (1198), Expect = e-128
 Identities = 228/329 (69%), Positives = 268/329 (81%)
 Frame = -3

Query: 1392 GRVVSKVSHVVREGDAVNCTIAELQPLRAEAEDIPLDIVYEDEHLLVVNKAAHMVVHPAP 1213
            GR++ KVSHV+R GD VNCTI ELQPLRAE EDIPLDIVYEDE +LVVNK AHMVVHPAP
Sbjct: 112  GRIIDKVSHVIRAGDKVNCTIKELQPLRAEPEDIPLDIVYEDESVLVVNKPAHMVVHPAP 171

Query: 1212 GNATGTLVNGILHHCRLPTVSFINPEVLXXXXXXXXXEFSTLSTDQDYNGGIGSGLCEAY 1033
            GNA GTLVNGILHHC LP V+  N +VL         E    S+ Q     + S +CE  
Sbjct: 172  GNANGTLVNGILHHCSLPMVALTNSKVLSETDDISDDESDIFSSTQGSMEEVTSNICEVS 231

Query: 1032 VRPGIVHRLDKGTSGLLVVAKDENSHAHLAEQFKKHTIKRVYVSLTCGVPSPVCERIEIP 853
            VRPGIVHRLDKGTSGLLVVAKDE+SHAHL+EQFK HTI R+Y+SLTCGVPS    RIE+P
Sbjct: 232  VRPGIVHRLDKGTSGLLVVAKDEHSHAHLSEQFKLHTINRIYLSLTCGVPSLNSGRIEVP 291

Query: 852  IGRDLNNRLRMSAAPGLNTRQKARYAASRYKVIEILAHGGCALVEWRLETGRTHQIRAHA 673
            IGRDL+NR+RM+A P  N+ ++AR+AASRY+V+E+LA GG ALVEWRLETGRTHQIRAHA
Sbjct: 292  IGRDLSNRIRMAAVPSPNSSRQARHAASRYRVVEVLAGGGSALVEWRLETGRTHQIRAHA 351

Query: 672  KYIGVPLLGDELYGGTKSMALSLLQSRNPSSFHRQIEQLVAKIERPCLHALSLGFRHPNT 493
            KY+G+PLLGDE+YGGT++MALSLL++R+ SSFH  + QLV+K++RPCLHA +LGF+HP+T
Sbjct: 352  KYLGIPLLGDEVYGGTRNMALSLLRTRSHSSFHGDLSQLVSKLQRPCLHAFTLGFKHPHT 411

Query: 492  GENLHFSKLPPADFAETLSQLRDISTEKV 406
            GEN+ FS  PPADF E LSQLR I  EKV
Sbjct: 412  GENMQFSCPPPADFTEVLSQLRSIGIEKV 440


>ref|XP_010241330.1| PREDICTED: RNA pseudouridine synthase 2, chloroplastic isoform X3
            [Nelumbo nucifera]
          Length = 443

 Score =  464 bits (1194), Expect = e-128
 Identities = 227/328 (69%), Positives = 267/328 (81%)
 Frame = -3

Query: 1392 GRVVSKVSHVVREGDAVNCTIAELQPLRAEAEDIPLDIVYEDEHLLVVNKAAHMVVHPAP 1213
            GR++ KVSHV+R GD VNCTI ELQPLRAE EDIPLDIVYEDE +LVVNK AHMVVHPAP
Sbjct: 112  GRIIDKVSHVIRAGDKVNCTIKELQPLRAEPEDIPLDIVYEDESVLVVNKPAHMVVHPAP 171

Query: 1212 GNATGTLVNGILHHCRLPTVSFINPEVLXXXXXXXXXEFSTLSTDQDYNGGIGSGLCEAY 1033
            GNA GTLVNGILHHC LP V+  N +VL         E    S+ Q     + S +CE  
Sbjct: 172  GNANGTLVNGILHHCSLPMVALTNSKVLSETDDISDDESDIFSSTQGSMEEVTSNICEVS 231

Query: 1032 VRPGIVHRLDKGTSGLLVVAKDENSHAHLAEQFKKHTIKRVYVSLTCGVPSPVCERIEIP 853
            VRPGIVHRLDKGTSGLLVVAKDE+SHAHL+EQFK HTI R+Y+SLTCGVPS    RIE+P
Sbjct: 232  VRPGIVHRLDKGTSGLLVVAKDEHSHAHLSEQFKLHTINRIYLSLTCGVPSLNSGRIEVP 291

Query: 852  IGRDLNNRLRMSAAPGLNTRQKARYAASRYKVIEILAHGGCALVEWRLETGRTHQIRAHA 673
            IGRDL+NR+RM+A P  N+ ++AR+AASRY+V+E+LA GG ALVEWRLETGRTHQIRAHA
Sbjct: 292  IGRDLSNRIRMAAVPSPNSSRQARHAASRYRVVEVLAGGGSALVEWRLETGRTHQIRAHA 351

Query: 672  KYIGVPLLGDELYGGTKSMALSLLQSRNPSSFHRQIEQLVAKIERPCLHALSLGFRHPNT 493
            KY+G+PLLGDE+YGGT++MALSLL++R+ SSFH  + QLV+K++RPCLHA +LGF+HP+T
Sbjct: 352  KYLGIPLLGDEVYGGTRNMALSLLRTRSHSSFHGDLSQLVSKLQRPCLHAFTLGFKHPHT 411

Query: 492  GENLHFSKLPPADFAETLSQLRDISTEK 409
            GEN+ FS  PPADF E LSQLR I  EK
Sbjct: 412  GENMQFSCPPPADFTEVLSQLRSIGIEK 439


>ref|XP_010241329.1| PREDICTED: RNA pseudouridine synthase 2, chloroplastic isoform X2
            [Nelumbo nucifera]
          Length = 453

 Score =  464 bits (1194), Expect = e-128
 Identities = 227/328 (69%), Positives = 267/328 (81%)
 Frame = -3

Query: 1392 GRVVSKVSHVVREGDAVNCTIAELQPLRAEAEDIPLDIVYEDEHLLVVNKAAHMVVHPAP 1213
            GR++ KVSHV+R GD VNCTI ELQPLRAE EDIPLDIVYEDE +LVVNK AHMVVHPAP
Sbjct: 112  GRIIDKVSHVIRAGDKVNCTIKELQPLRAEPEDIPLDIVYEDESVLVVNKPAHMVVHPAP 171

Query: 1212 GNATGTLVNGILHHCRLPTVSFINPEVLXXXXXXXXXEFSTLSTDQDYNGGIGSGLCEAY 1033
            GNA GTLVNGILHHC LP V+  N +VL         E    S+ Q     + S +CE  
Sbjct: 172  GNANGTLVNGILHHCSLPMVALTNSKVLSETDDISDDESDIFSSTQGSMEEVTSNICEVS 231

Query: 1032 VRPGIVHRLDKGTSGLLVVAKDENSHAHLAEQFKKHTIKRVYVSLTCGVPSPVCERIEIP 853
            VRPGIVHRLDKGTSGLLVVAKDE+SHAHL+EQFK HTI R+Y+SLTCGVPS    RIE+P
Sbjct: 232  VRPGIVHRLDKGTSGLLVVAKDEHSHAHLSEQFKLHTINRIYLSLTCGVPSLNSGRIEVP 291

Query: 852  IGRDLNNRLRMSAAPGLNTRQKARYAASRYKVIEILAHGGCALVEWRLETGRTHQIRAHA 673
            IGRDL+NR+RM+A P  N+ ++AR+AASRY+V+E+LA GG ALVEWRLETGRTHQIRAHA
Sbjct: 292  IGRDLSNRIRMAAVPSPNSSRQARHAASRYRVVEVLAGGGSALVEWRLETGRTHQIRAHA 351

Query: 672  KYIGVPLLGDELYGGTKSMALSLLQSRNPSSFHRQIEQLVAKIERPCLHALSLGFRHPNT 493
            KY+G+PLLGDE+YGGT++MALSLL++R+ SSFH  + QLV+K++RPCLHA +LGF+HP+T
Sbjct: 352  KYLGIPLLGDEVYGGTRNMALSLLRTRSHSSFHGDLSQLVSKLQRPCLHAFTLGFKHPHT 411

Query: 492  GENLHFSKLPPADFAETLSQLRDISTEK 409
            GEN+ FS  PPADF E LSQLR I  EK
Sbjct: 412  GENMQFSCPPPADFTEVLSQLRSIGIEK 439


>ref|XP_003634352.1| PREDICTED: RNA pseudouridine synthase 2, chloroplastic isoform X1
            [Vitis vinifera] gi|302141717|emb|CBI18920.3| unnamed
            protein product [Vitis vinifera]
          Length = 433

 Score =  460 bits (1183), Expect = e-126
 Identities = 230/329 (69%), Positives = 268/329 (81%), Gaps = 2/329 (0%)
 Frame = -3

Query: 1389 RVVSKVSHVVREGDAVNCTIAELQPLRAEAEDIPLDIVYEDEHLLVVNKAAHMVVHPAPG 1210
            R+V KVSHV+R GD VNCTI+ELQPLRAE EDIPLDIVYEDEH+LVVNK AHMVVHPAPG
Sbjct: 109  RIVDKVSHVIRAGDKVNCTISELQPLRAEPEDIPLDIVYEDEHVLVVNKPAHMVVHPAPG 168

Query: 1209 NATGTLVNGILHHCRLPTVSFINPEVLXXXXXXXXXEFSTLSTDQ--DYNGGIGSGLCEA 1036
            NA+GTLVNGILHHC LPTV+  N +           E   +S D+   +  G   G CE 
Sbjct: 169  NASGTLVNGILHHCSLPTVALPNRD----------SEEDDISDDEFNSFAAGQNCGTCET 218

Query: 1035 YVRPGIVHRLDKGTSGLLVVAKDENSHAHLAEQFKKHTIKRVYVSLTCGVPSPVCERIEI 856
             +RPGIVHRLDKGTSGLLVVAKDE+SHAHL+EQFK H+I RVY+SLT GVP+P+  R+EI
Sbjct: 219  NIRPGIVHRLDKGTSGLLVVAKDEHSHAHLSEQFKLHSIHRVYISLTSGVPTPLSGRVEI 278

Query: 855  PIGRDLNNRLRMSAAPGLNTRQKARYAASRYKVIEILAHGGCALVEWRLETGRTHQIRAH 676
            P+GRD NNR+RM+A PG +   +AR+AASRYKVIEILA GG ALVEWRLETGRTHQIRAH
Sbjct: 279  PVGRDPNNRIRMTAVPGPSNSGQARHAASRYKVIEILAAGGSALVEWRLETGRTHQIRAH 338

Query: 675  AKYIGVPLLGDELYGGTKSMALSLLQSRNPSSFHRQIEQLVAKIERPCLHALSLGFRHPN 496
            AKY+G+PLLGDE+YGGTK+MALSLL+ R PSS H Q+ QLV++++RPCLHA++LGF HP 
Sbjct: 339  AKYLGIPLLGDEVYGGTKNMALSLLRPRIPSSHHGQLAQLVSRLDRPCLHAVALGFNHPK 398

Query: 495  TGENLHFSKLPPADFAETLSQLRDISTEK 409
            TG+N+HFS  PP DFAE LS LR ISTEK
Sbjct: 399  TGKNVHFSCQPPEDFAEILSWLRKISTEK 427


>ref|XP_010320444.1| PREDICTED: RNA pseudouridine synthase 2, chloroplastic isoform X3
            [Solanum lycopersicum]
          Length = 430

 Score =  450 bits (1158), Expect = e-123
 Identities = 227/330 (68%), Positives = 266/330 (80%)
 Frame = -3

Query: 1392 GRVVSKVSHVVREGDAVNCTIAELQPLRAEAEDIPLDIVYEDEHLLVVNKAAHMVVHPAP 1213
            GRV  KVSH+V+ GD V+CTIA+L+PLRAE EDIPLDIVYEDEH+LVVNK AHMVVHPAP
Sbjct: 102  GRVTDKVSHMVKGGDKVDCTIADLKPLRAEPEDIPLDIVYEDEHVLVVNKPAHMVVHPAP 161

Query: 1212 GNATGTLVNGILHHCRLPTVSFINPEVLXXXXXXXXXEFSTLSTDQDYNGGIGSGLCEAY 1033
            GNATGTLV+GILHHC LPTVSF   EVL         E +  S ++  N    S +CE+ 
Sbjct: 162  GNATGTLVSGILHHCSLPTVSFPGEEVLSDGEDASDDELNIFSPNRSPNYDDSSVMCESS 221

Query: 1032 VRPGIVHRLDKGTSGLLVVAKDENSHAHLAEQFKKHTIKRVYVSLTCGVPSPVCERIEIP 853
            VRPGIVHRLDKGTSGLLVVAK+E+S A LAEQFKKHTIKRVYVS+TCGVP+ V  R++IP
Sbjct: 222  VRPGIVHRLDKGTSGLLVVAKNEHSLADLAEQFKKHTIKRVYVSITCGVPASVAGRVDIP 281

Query: 852  IGRDLNNRLRMSAAPGLNTRQKARYAASRYKVIEILAHGGCALVEWRLETGRTHQIRAHA 673
            IGRD NNR+RM+A PG     K+R+A SRYKVIE LA GG ALVEWRLETGRTHQ     
Sbjct: 282  IGRDSNNRIRMAAIPGTPKSGKSRHAVSRYKVIEKLAGGGSALVEWRLETGRTHQ----- 336

Query: 672  KYIGVPLLGDELYGGTKSMALSLLQSRNPSSFHRQIEQLVAKIERPCLHALSLGFRHPNT 493
             ++G+PL+GDE+YGGTK+MALSLLQ + P  FH ++ QLV++I+RPCLHAL+LGFRHP T
Sbjct: 337  -HLGIPLMGDEVYGGTKNMALSLLQPKTPPMFHGELSQLVSQIDRPCLHALTLGFRHPFT 395

Query: 492  GENLHFSKLPPADFAETLSQLRDISTEKVT 403
            GEN+HF++LPP DFAE LS+LR I TEKVT
Sbjct: 396  GENIHFTRLPPPDFAEILSELRAIKTEKVT 425


>ref|XP_010533976.1| PREDICTED: RNA pseudouridine synthase 2, chloroplastic isoform X1
            [Tarenaya hassleriana]
          Length = 435

 Score =  449 bits (1154), Expect = e-123
 Identities = 231/330 (70%), Positives = 265/330 (80%)
 Frame = -3

Query: 1392 GRVVSKVSHVVREGDAVNCTIAELQPLRAEAEDIPLDIVYEDEHLLVVNKAAHMVVHPAP 1213
            GRVV KVSH V+ GD V+CTI+ELQPL+AE ED+PLDIVYED H+LVVNK AHMVVHPAP
Sbjct: 115  GRVVDKVSHNVKAGDMVSCTISELQPLKAEPEDMPLDIVYEDNHVLVVNKPAHMVVHPAP 174

Query: 1212 GNATGTLVNGILHHCRLPTVSFINPEVLXXXXXXXXXEFSTLSTDQDYNGGIGSGLCEAY 1033
            GN  GTLVNGILHHC LP V++ + EV          +    S D++    + S    A 
Sbjct: 175  GNPNGTLVNGILHHCSLPIVAYSDTEV--------DPDEEDFSEDEET---MSSSAYSAS 223

Query: 1032 VRPGIVHRLDKGTSGLLVVAKDENSHAHLAEQFKKHTIKRVYVSLTCGVPSPVCERIEIP 853
            VRPGIVHRLDKGTSGLLVVAKDE+SHAHLAEQFK+HTI+RVYVSLTCGVPSP   RI IP
Sbjct: 224  VRPGIVHRLDKGTSGLLVVAKDEHSHAHLAEQFKQHTIERVYVSLTCGVPSPSHGRIVIP 283

Query: 852  IGRDLNNRLRMSAAPGLNTRQKARYAASRYKVIEILAHGGCALVEWRLETGRTHQIRAHA 673
            IGRDLNNR+RM+A PGL+ R +AR+AASRYKVIEILA GG ALVEWRLETGRTHQIRAHA
Sbjct: 284  IGRDLNNRIRMAAIPGLSNRGRARHAASRYKVIEILAGGGSALVEWRLETGRTHQIRAHA 343

Query: 672  KYIGVPLLGDELYGGTKSMALSLLQSRNPSSFHRQIEQLVAKIERPCLHALSLGFRHPNT 493
            KY+GVPLLGDE+YG TKSMALSLLQ R   + H QI +LV++++RPCLHAL LGF+HP T
Sbjct: 344  KYVGVPLLGDEVYGATKSMALSLLQKRASRNDHGQILELVSRLDRPCLHALVLGFKHPCT 403

Query: 492  GENLHFSKLPPADFAETLSQLRDISTEKVT 403
            GE++ FS  PP DFAETL  LR + TEKV+
Sbjct: 404  GEDVKFSCPPPPDFAETLGMLRKLGTEKVS 433


>ref|XP_010935174.1| PREDICTED: RNA pseudouridine synthase 2, chloroplastic isoform X1
            [Elaeis guineensis]
          Length = 449

 Score =  447 bits (1151), Expect = e-123
 Identities = 224/327 (68%), Positives = 257/327 (78%), Gaps = 3/327 (0%)
 Frame = -3

Query: 1392 GRVVSKVSHVVREGDAVNCTIAELQPLRAEAEDIPLDIVYEDEHLLVVNKAAHMVVHPAP 1213
            GR V KVSH+++ GD V+CT++ELQPLRAEAEDIPLDIVYED H+LVVNK AHMVVHPAP
Sbjct: 120  GRTVDKVSHIIKGGDMVSCTVSELQPLRAEAEDIPLDIVYEDAHVLVVNKPAHMVVHPAP 179

Query: 1212 GNATGTLVNGILHHCRLPTVSFINPEVLXXXXXXXXXEFSTLST---DQDYNGGIGSGLC 1042
            GNA GTLVN ILHHCRLPT++ +N   +           S +     DQ    GI S   
Sbjct: 180  GNANGTLVNAILHHCRLPTIACVNKSKISESEDCSESSDSEMDNYYFDQSSVEGISSENS 239

Query: 1041 EAYVRPGIVHRLDKGTSGLLVVAKDENSHAHLAEQFKKHTIKRVYVSLTCGVPSPVCERI 862
            EA VRPGIVHRLDKGTSGLLVVAKDE+SHAHLAEQFK HTI RVY+SLTCGVP+P   RI
Sbjct: 240  EALVRPGIVHRLDKGTSGLLVVAKDEHSHAHLAEQFKLHTIHRVYISLTCGVPNPSSGRI 299

Query: 861  EIPIGRDLNNRLRMSAAPGLNTRQKARYAASRYKVIEILAHGGCALVEWRLETGRTHQIR 682
            EIPI RD NNR+RM+A  G +  + ARYAASRYKVIE+L  GG ALVEWRLETGRTHQIR
Sbjct: 300  EIPIARDSNNRIRMAAVLGTSNSRHARYAASRYKVIELLGRGGSALVEWRLETGRTHQIR 359

Query: 681  AHAKYIGVPLLGDELYGGTKSMALSLLQSRNPSSFHRQIEQLVAKIERPCLHALSLGFRH 502
            AHAKY+G+PLLGDE+YGGTKSMALSLL+ R  SS H  + Q+++K++RPCLHA SLGF+H
Sbjct: 360  AHAKYMGIPLLGDEVYGGTKSMALSLLRPRTSSSHHGHLSQILSKLQRPCLHASSLGFKH 419

Query: 501  PNTGENLHFSKLPPADFAETLSQLRDI 421
            P+TGE L FS  PP DFAE L QL+ I
Sbjct: 420  PHTGEYLRFSCPPPDDFAEVLDQLQSI 446


>ref|XP_007017900.1| Pseudouridine synthase family protein isoform 1 [Theobroma cacao]
            gi|508723228|gb|EOY15125.1| Pseudouridine synthase family
            protein isoform 1 [Theobroma cacao]
          Length = 433

 Score =  447 bits (1150), Expect = e-123
 Identities = 225/330 (68%), Positives = 259/330 (78%)
 Frame = -3

Query: 1392 GRVVSKVSHVVREGDAVNCTIAELQPLRAEAEDIPLDIVYEDEHLLVVNKAAHMVVHPAP 1213
            GRVV KVSH +R GD VNC I+ELQPLRAE EDIPLDIVYED+H+LVVNK  HMVVHPAP
Sbjct: 111  GRVVDKVSHGLRHGDKVNCVISELQPLRAEPEDIPLDIVYEDDHVLVVNKPPHMVVHPAP 170

Query: 1212 GNATGTLVNGILHHCRLPTVSFINPEVLXXXXXXXXXEFSTLSTDQDYNGGIGSGLCEAY 1033
            GNATGTLVNGILHHC LPTV+    EVL            T     D  G        A 
Sbjct: 171  GNATGTLVNGILHHCSLPTVALSEKEVLS----------DTEDVSDDDEGFCYGASAAAS 220

Query: 1032 VRPGIVHRLDKGTSGLLVVAKDENSHAHLAEQFKKHTIKRVYVSLTCGVPSPVCERIEIP 853
            VRPGIVHRLDKGTSGLLVVAKDE+SH+HL+EQFK+HTI+RVY+SLTCGVPSP   R++I 
Sbjct: 221  VRPGIVHRLDKGTSGLLVVAKDEHSHSHLSEQFKQHTIQRVYISLTCGVPSPSAGRVDIS 280

Query: 852  IGRDLNNRLRMSAAPGLNTRQKARYAASRYKVIEILAHGGCALVEWRLETGRTHQIRAHA 673
            IGRD NNR+RM A PGLN   +AR+AASRYKVIE+LA GG AL++WRLETGRTHQIRAHA
Sbjct: 281  IGRDSNNRVRMIAVPGLNHHGRARHAASRYKVIEVLAGGGSALIQWRLETGRTHQIRAHA 340

Query: 672  KYIGVPLLGDELYGGTKSMALSLLQSRNPSSFHRQIEQLVAKIERPCLHALSLGFRHPNT 493
            KY+G+PLLGDE+YGGTKSMALSLL+ R P +++ Q+ +LV+++ERP LHAL LGF HP++
Sbjct: 341  KYMGIPLLGDEVYGGTKSMALSLLRPRTPPNYNDQLSRLVSRLERPYLHALVLGFEHPHS 400

Query: 492  GENLHFSKLPPADFAETLSQLRDISTEKVT 403
             E +HFS  PP DFAE LS LR I TEK T
Sbjct: 401  REMMHFSCQPPPDFAEILSDLRKIGTEKPT 430


>gb|KCW70505.1| hypothetical protein EUGRSUZ_F03712 [Eucalyptus grandis]
          Length = 462

 Score =  443 bits (1140), Expect = e-121
 Identities = 225/329 (68%), Positives = 259/329 (78%)
 Frame = -3

Query: 1392 GRVVSKVSHVVREGDAVNCTIAELQPLRAEAEDIPLDIVYEDEHLLVVNKAAHMVVHPAP 1213
            GRVV KVSH VR GD V+CTI+ELQPLRAE EDIP+DIVYEDEH+LVVNK AHMVVHPAP
Sbjct: 115  GRVVDKVSHNVRAGDMVDCTISELQPLRAEPEDIPVDIVYEDEHVLVVNKPAHMVVHPAP 174

Query: 1212 GNATGTLVNGILHHCRLPTVSFINPEVLXXXXXXXXXEFSTLSTDQDYNGGIGSGLCEAY 1033
            GNA+GTLVN ILHHC LPTV+F   E+L         E S+ +  +    G  S      
Sbjct: 175  GNASGTLVNAILHHCSLPTVAFSETELLSEGEDVSDDESSSSTACETSTKGFNSSESGGS 234

Query: 1032 VRPGIVHRLDKGTSGLLVVAKDENSHAHLAEQFKKHTIKRVYVSLTCGVPSPVCERIEIP 853
            VRPGIVHRLDKGTSGLLVVAK+E SHAHL+EQFK HTI+RVYVSLT GVPS    RIE+P
Sbjct: 235  VRPGIVHRLDKGTSGLLVVAKNERSHAHLSEQFKMHTIRRVYVSLTNGVPSATSGRIEVP 294

Query: 852  IGRDLNNRLRMSAAPGLNTRQKARYAASRYKVIEILAHGGCALVEWRLETGRTHQIRAHA 673
            IGRD NNR+RMSA PG +  ++ARYAASRYKVIE+LA G  ALVEWRLETGRTHQIRAHA
Sbjct: 295  IGRDTNNRIRMSAIPGPSNGRQARYAASRYKVIEVLAGGSSALVEWRLETGRTHQIRAHA 354

Query: 672  KYIGVPLLGDELYGGTKSMALSLLQSRNPSSFHRQIEQLVAKIERPCLHALSLGFRHPNT 493
            KY+G+PLLGDE+YGGTK+M LSLLQ++ P     Q+ +LV+K+ERPCLHA+SLGF HP T
Sbjct: 355  KYVGIPLLGDEVYGGTKNMILSLLQAKLPIGRQSQLSELVSKLERPCLHAVSLGFIHPYT 414

Query: 492  GENLHFSKLPPADFAETLSQLRDISTEKV 406
            GEN+ FS  PP DF+E L QLR +  +KV
Sbjct: 415  GENVQFSCQPPEDFSEILCQLRRLGMKKV 443


>ref|XP_010063294.1| PREDICTED: RNA pseudouridine synthase 2, chloroplastic [Eucalyptus
            grandis] gi|702379712|ref|XP_010063295.1| PREDICTED: RNA
            pseudouridine synthase 2, chloroplastic [Eucalyptus
            grandis] gi|702379717|ref|XP_010063296.1| PREDICTED: RNA
            pseudouridine synthase 2, chloroplastic [Eucalyptus
            grandis] gi|702379720|ref|XP_010063297.1| PREDICTED: RNA
            pseudouridine synthase 2, chloroplastic [Eucalyptus
            grandis]
          Length = 454

 Score =  442 bits (1136), Expect = e-121
 Identities = 224/328 (68%), Positives = 258/328 (78%)
 Frame = -3

Query: 1392 GRVVSKVSHVVREGDAVNCTIAELQPLRAEAEDIPLDIVYEDEHLLVVNKAAHMVVHPAP 1213
            GRVV KVSH VR GD V+CTI+ELQPLRAE EDIP+DIVYEDEH+LVVNK AHMVVHPAP
Sbjct: 122  GRVVDKVSHNVRAGDMVDCTISELQPLRAEPEDIPVDIVYEDEHVLVVNKPAHMVVHPAP 181

Query: 1212 GNATGTLVNGILHHCRLPTVSFINPEVLXXXXXXXXXEFSTLSTDQDYNGGIGSGLCEAY 1033
            GNA+GTLVN ILHHC LPTV+F   E+L         E S+ +  +    G  S      
Sbjct: 182  GNASGTLVNAILHHCSLPTVAFSETELLSEGEDVSDDESSSSTACETSTKGFNSSESGGS 241

Query: 1032 VRPGIVHRLDKGTSGLLVVAKDENSHAHLAEQFKKHTIKRVYVSLTCGVPSPVCERIEIP 853
            VRPGIVHRLDKGTSGLLVVAK+E SHAHL+EQFK HTI+RVYVSLT GVPS    RIE+P
Sbjct: 242  VRPGIVHRLDKGTSGLLVVAKNERSHAHLSEQFKMHTIRRVYVSLTNGVPSATSGRIEVP 301

Query: 852  IGRDLNNRLRMSAAPGLNTRQKARYAASRYKVIEILAHGGCALVEWRLETGRTHQIRAHA 673
            IGRD NNR+RMSA PG +  ++ARYAASRYKVIE+LA G  ALVEWRLETGRTHQIRAHA
Sbjct: 302  IGRDTNNRIRMSAIPGPSNGRQARYAASRYKVIEVLAGGSSALVEWRLETGRTHQIRAHA 361

Query: 672  KYIGVPLLGDELYGGTKSMALSLLQSRNPSSFHRQIEQLVAKIERPCLHALSLGFRHPNT 493
            KY+G+PLLGDE+YGGTK+M LSLLQ++ P     Q+ +LV+K+ERPCLHA+SLGF HP T
Sbjct: 362  KYVGIPLLGDEVYGGTKNMILSLLQAKLPIGRQSQLSELVSKLERPCLHAVSLGFIHPYT 421

Query: 492  GENLHFSKLPPADFAETLSQLRDISTEK 409
            GEN+ FS  PP DF+E L QLR +  +K
Sbjct: 422  GENVQFSCQPPEDFSEILCQLRRLGMKK 449