BLASTX nr result

ID: Forsythia21_contig00040233 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Forsythia21_contig00040233
         (241 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAJ09951.2| putative gag-pol polyprotein [Citrus sinensis]         65   1e-08

>emb|CAJ09951.2| putative gag-pol polyprotein [Citrus sinensis]
          Length = 1334

 Score = 65.5 bits (158), Expect = 1e-08
 Identities = 33/80 (41%), Positives = 51/80 (63%), Gaps = 2/80 (2%)
 Frame = -2

Query: 234  ETQHPDFEDYQLARDRTRRDIRAFLRFG--DYVSLATMSYQDLMFKEPKTYSEAVNGQNV 61
            E    D ++YQLARDR RR++RA +R+G  D ++ A +   ++  +EP  +SEA+   + 
Sbjct: 767  ELPQADLQNYQLARDRVRREVRAPVRYGYADLIAYALLCADEVTIEEPANFSEAMESVHC 826

Query: 60   DN*YCAMK*EVESLKRNNTW 1
            D    AM+ E+ESL+RN TW
Sbjct: 827  DKWLEAMQDEMESLQRNQTW 846


Top