BLASTX nr result
ID: Forsythia21_contig00038046
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Forsythia21_contig00038046
(384 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|YP_009115885.1| RNA polymerase beta'' subunit [Scrophularia ... 256 4e-66
ref|YP_007353905.1| RNA polymerase beta'' subunit (chloroplast) ... 256 5e-66
ref|YP_008815927.1| RNA polymerase beta'' subunit (chloroplast) ... 254 1e-65
ref|YP_004935656.2| rpoC2 gene product (chloroplast) [Sesamum in... 254 1e-65
ref|YP_008964024.1| RNA polymerase beta'' subunit [Ajuga reptans... 254 2e-65
ref|YP_009117211.1| RNA polymerase beta' subunit (chloroplast) [... 254 2e-65
gb|AGF30359.1| RNA polymerase beta'', partial (chloroplast) [Gle... 254 2e-65
ref|YP_009144505.1| RNA polymerase beta'' subunit (chloroplast) ... 253 3e-65
ref|YP_007507101.1| RNA polymerase beta subunit-2 (chloroplast) ... 253 3e-65
ref|YP_003359349.2| RNA polymerase beta II subunit (chloroplast)... 253 3e-65
ref|YP_004563771.1| RNA polymerase beta'' chain [Olea europaea s... 253 3e-65
ref|YP_004563994.1| RNA polymerase beta'' chain [Olea woodiana s... 253 3e-65
emb|CBR30396.1| RNA polymerase beta'' chain [Olea europaea subsp... 253 3e-65
ref|YP_004376411.1| RNA polymerase beta'' chain [Olea europaea s... 253 3e-65
gb|ADD72079.1| RNA polymerase beta' subunit [Olea europaea] gi|3... 253 3e-65
ref|YP_778480.1| RNA polymerase beta'' subunit [Jasminum nudiflo... 253 4e-65
gb|ADD31149.1| RNA polymerase beta'' subunit protein (chloroplas... 253 5e-65
ref|YP_009110592.1| RNA polymerase beta'' chain (chloroplast) [H... 252 6e-65
gb|AII18685.1| RNA polymerase beta' subunit, partial (chloroplas... 252 8e-65
gb|AII18682.1| RNA polymerase beta' subunit, partial (chloroplas... 252 8e-65
>ref|YP_009115885.1| RNA polymerase beta'' subunit [Scrophularia takesimensis]
gi|744673729|gb|AJD00714.1| RNA polymerase beta''
subunit [Scrophularia takesimensis]
Length = 1389
Score = 256 bits (654), Expect = 4e-66
Identities = 125/128 (97%), Positives = 127/128 (99%)
Frame = +1
Query: 1 ARKGVVDTAVRTSDAGYLTRRLVEVVQHIVVRRRDCGTVRGISVSPRNGMMPERIFIQTL 180
ARKGVVDTAVRTSDAGYLTRRLVEVVQHIVVRR DCGTVRGISVSPRNGMMPERIFIQTL
Sbjct: 189 ARKGVVDTAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTVRGISVSPRNGMMPERIFIQTL 248
Query: 181 MGRVLADDIYMGTRCIATRNQDIGIGLVNRFITFRAQPISIRTPFTCRSASWICRLCYGR 360
+GRVLADDIYMGTRCIATRNQDIGIGLVNRFITFRAQPI+IRTPFTCRSASWICRLCYGR
Sbjct: 249 IGRVLADDIYMGTRCIATRNQDIGIGLVNRFITFRAQPIAIRTPFTCRSASWICRLCYGR 308
Query: 361 SPTHGDLV 384
SPTHGDLV
Sbjct: 309 SPTHGDLV 316
>ref|YP_007353905.1| RNA polymerase beta'' subunit (chloroplast) [Tectona grandis]
gi|438687594|emb|CCP47120.1| RNA polymerase beta''
subunit (chloroplast) [Tectona grandis]
gi|438688278|emb|CCP47209.1| RNA polymerase beta''
subunit (chloroplast) [Tectona grandis]
gi|438688402|emb|CCP47298.1| RNA polymerase beta''
subunit (chloroplast) [Tectona grandis]
Length = 1395
Score = 256 bits (653), Expect = 5e-66
Identities = 124/128 (96%), Positives = 127/128 (99%)
Frame = +1
Query: 1 ARKGVVDTAVRTSDAGYLTRRLVEVVQHIVVRRRDCGTVRGISVSPRNGMMPERIFIQTL 180
ARKGVVDTAVRTSDAGYLTRRLVEVVQHIVVRR DCGT+RGISVSPRNGMMPERIFIQTL
Sbjct: 189 ARKGVVDTAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTIRGISVSPRNGMMPERIFIQTL 248
Query: 181 MGRVLADDIYMGTRCIATRNQDIGIGLVNRFITFRAQPISIRTPFTCRSASWICRLCYGR 360
+GRVLADDIYMGTRCIATRNQDIGIGLVNRFITFRAQPI+IRTPFTCRSASWICRLCYGR
Sbjct: 249 IGRVLADDIYMGTRCIATRNQDIGIGLVNRFITFRAQPIAIRTPFTCRSASWICRLCYGR 308
Query: 361 SPTHGDLV 384
SPTHGDLV
Sbjct: 309 SPTHGDLV 316
>ref|YP_008815927.1| RNA polymerase beta'' subunit (chloroplast) [Lindenbergia
philippensis] gi|557136853|emb|CDI43908.1| RNA
polymerase beta'' subunit (chloroplast) [Lindenbergia
philippensis]
Length = 1368
Score = 254 bits (650), Expect = 1e-65
Identities = 124/128 (96%), Positives = 127/128 (99%)
Frame = +1
Query: 1 ARKGVVDTAVRTSDAGYLTRRLVEVVQHIVVRRRDCGTVRGISVSPRNGMMPERIFIQTL 180
ARKGVVDTAVRTSDAGYLTRRLVEVVQHIVVRR DCGTVRGISVSPRNGMMPERIFIQTL
Sbjct: 185 ARKGVVDTAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTVRGISVSPRNGMMPERIFIQTL 244
Query: 181 MGRVLADDIYMGTRCIATRNQDIGIGLVNRFITFRAQPISIRTPFTCRSASWICRLCYGR 360
+GRVLADDIY+GTRCIATRNQDIGIGLVNRFITFRAQPI+IRTPFTCRSASWICRLCYGR
Sbjct: 245 IGRVLADDIYIGTRCIATRNQDIGIGLVNRFITFRAQPIAIRTPFTCRSASWICRLCYGR 304
Query: 361 SPTHGDLV 384
SPTHGDLV
Sbjct: 305 SPTHGDLV 312
>ref|YP_004935656.2| rpoC2 gene product (chloroplast) [Sesamum indicum]
gi|378747302|gb|AEO92696.2| RNA polymerase beta''
subunit (chloroplast) [Sesamum indicum]
gi|496538591|gb|AGL45326.1| RpoC2 (chloroplast) [Sesamum
indicum]
Length = 1390
Score = 254 bits (650), Expect = 1e-65
Identities = 124/128 (96%), Positives = 127/128 (99%)
Frame = +1
Query: 1 ARKGVVDTAVRTSDAGYLTRRLVEVVQHIVVRRRDCGTVRGISVSPRNGMMPERIFIQTL 180
ARKGVVDTAVRTSDAGYLTRRLVEVVQHIVVRR DCGTVRGISVSP+NGMMPERIFIQTL
Sbjct: 189 ARKGVVDTAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTVRGISVSPQNGMMPERIFIQTL 248
Query: 181 MGRVLADDIYMGTRCIATRNQDIGIGLVNRFITFRAQPISIRTPFTCRSASWICRLCYGR 360
+GRVLADDIYMGTRCIATRNQDIGIGLVNRFITFRAQPI+IRTPFTCRSASWICRLCYGR
Sbjct: 249 IGRVLADDIYMGTRCIATRNQDIGIGLVNRFITFRAQPIAIRTPFTCRSASWICRLCYGR 308
Query: 361 SPTHGDLV 384
SPTHGDLV
Sbjct: 309 SPTHGDLV 316
>ref|YP_008964024.1| RNA polymerase beta'' subunit [Ajuga reptans]
gi|558697185|gb|AHA84940.1| RNA polymerase beta''
subunit [Ajuga reptans]
Length = 1377
Score = 254 bits (649), Expect = 2e-65
Identities = 123/128 (96%), Positives = 127/128 (99%)
Frame = +1
Query: 1 ARKGVVDTAVRTSDAGYLTRRLVEVVQHIVVRRRDCGTVRGISVSPRNGMMPERIFIQTL 180
ARKGVVDTAVRTSDAGYLTRRLVEVVQHIVVRR DCGTVRGISVSP+NGMMPERIFIQTL
Sbjct: 185 ARKGVVDTAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTVRGISVSPQNGMMPERIFIQTL 244
Query: 181 MGRVLADDIYMGTRCIATRNQDIGIGLVNRFITFRAQPISIRTPFTCRSASWICRLCYGR 360
+GRVLADDIYMGTRCIATRNQD+GIGLVNRFITFRAQPI+IRTPFTCRSASWICRLCYGR
Sbjct: 245 IGRVLADDIYMGTRCIATRNQDVGIGLVNRFITFRAQPIAIRTPFTCRSASWICRLCYGR 304
Query: 361 SPTHGDLV 384
SPTHGDLV
Sbjct: 305 SPTHGDLV 312
>ref|YP_009117211.1| RNA polymerase beta' subunit (chloroplast) [Premna microphylla]
gi|748013894|gb|AJE28364.1| RNA polymerase beta' subunit
(chloroplast) [Premna microphylla]
Length = 1394
Score = 254 bits (648), Expect = 2e-65
Identities = 124/128 (96%), Positives = 126/128 (98%)
Frame = +1
Query: 1 ARKGVVDTAVRTSDAGYLTRRLVEVVQHIVVRRRDCGTVRGISVSPRNGMMPERIFIQTL 180
ARKGVVDTAVRTSDAGYLTRRLVEVVQHIVVRR DCGTVRGISVSPRNGMMPERIFIQTL
Sbjct: 189 ARKGVVDTAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTVRGISVSPRNGMMPERIFIQTL 248
Query: 181 MGRVLADDIYMGTRCIATRNQDIGIGLVNRFITFRAQPISIRTPFTCRSASWICRLCYGR 360
+GRVLADDIYMGTRCIATRNQDIGIGLVNRFIT RAQPI+IRTPFTCRSASWICRLCYGR
Sbjct: 249 IGRVLADDIYMGTRCIATRNQDIGIGLVNRFITLRAQPIAIRTPFTCRSASWICRLCYGR 308
Query: 361 SPTHGDLV 384
SPTHGDLV
Sbjct: 309 SPTHGDLV 316
>gb|AGF30359.1| RNA polymerase beta'', partial (chloroplast) [Glechoma hederacea]
Length = 225
Score = 254 bits (648), Expect = 2e-65
Identities = 124/128 (96%), Positives = 126/128 (98%)
Frame = +1
Query: 1 ARKGVVDTAVRTSDAGYLTRRLVEVVQHIVVRRRDCGTVRGISVSPRNGMMPERIFIQTL 180
ARKGVVDTAVRTSDAGYLTRRLVEVVQHIVVRR DCGTVRGISVSPRNGMMPERIFIQTL
Sbjct: 5 ARKGVVDTAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTVRGISVSPRNGMMPERIFIQTL 64
Query: 181 MGRVLADDIYMGTRCIATRNQDIGIGLVNRFITFRAQPISIRTPFTCRSASWICRLCYGR 360
+GRVLADDIYMGTRCIATRNQDIGIGLVNRFITFRAQPI+IRTPFTC SASWICRLCYGR
Sbjct: 65 IGRVLADDIYMGTRCIATRNQDIGIGLVNRFITFRAQPIAIRTPFTCXSASWICRLCYGR 124
Query: 361 SPTHGDLV 384
SPTHGDLV
Sbjct: 125 SPTHGDLV 132
>ref|YP_009144505.1| RNA polymerase beta'' subunit (chloroplast) [Rosmarinus
officinalis] gi|827345133|gb|AKJ76717.1| RNA polymerase
beta'' subunit (chloroplast) [Rosmarinus officinalis]
Length = 1395
Score = 253 bits (647), Expect = 3e-65
Identities = 124/128 (96%), Positives = 126/128 (98%)
Frame = +1
Query: 1 ARKGVVDTAVRTSDAGYLTRRLVEVVQHIVVRRRDCGTVRGISVSPRNGMMPERIFIQTL 180
ARKGVVDTAVRTSDAGYLTRRLVEVVQHIVVRR DCGTVRGISVSP NGMMPERIFIQTL
Sbjct: 189 ARKGVVDTAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTVRGISVSPGNGMMPERIFIQTL 248
Query: 181 MGRVLADDIYMGTRCIATRNQDIGIGLVNRFITFRAQPISIRTPFTCRSASWICRLCYGR 360
+GRVLADDIYMGTRCIATRNQDIGIGLVNRFITFRAQPI+IRTPFTCRSASWICRLCYGR
Sbjct: 249 IGRVLADDIYMGTRCIATRNQDIGIGLVNRFITFRAQPITIRTPFTCRSASWICRLCYGR 308
Query: 361 SPTHGDLV 384
SPTHGDLV
Sbjct: 309 SPTHGDLV 316
>ref|YP_007507101.1| RNA polymerase beta subunit-2 (chloroplast) [Salvia miltiorrhiza]
gi|401879732|gb|AFQ30919.1| RNA polymerase beta
subunit-2 (chloroplast) [Salvia miltiorrhiza]
gi|573461941|emb|CCQ71610.1| RNA polymerase beta''
subunit (chloroplast) [Salvia miltiorrhiza]
Length = 1395
Score = 253 bits (647), Expect = 3e-65
Identities = 124/128 (96%), Positives = 126/128 (98%)
Frame = +1
Query: 1 ARKGVVDTAVRTSDAGYLTRRLVEVVQHIVVRRRDCGTVRGISVSPRNGMMPERIFIQTL 180
ARKGVVDTAVRTSDAGYLTRRLVEVVQHIVVRR DCGTVRGISVSP NGMMPERIFIQTL
Sbjct: 189 ARKGVVDTAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTVRGISVSPGNGMMPERIFIQTL 248
Query: 181 MGRVLADDIYMGTRCIATRNQDIGIGLVNRFITFRAQPISIRTPFTCRSASWICRLCYGR 360
+GRVLADDIYMGTRCIATRNQDIGIGLVNRFITFRAQPI+IRTPFTCRSASWICRLCYGR
Sbjct: 249 IGRVLADDIYMGTRCIATRNQDIGIGLVNRFITFRAQPITIRTPFTCRSASWICRLCYGR 308
Query: 361 SPTHGDLV 384
SPTHGDLV
Sbjct: 309 SPTHGDLV 316
>ref|YP_003359349.2| RNA polymerase beta II subunit (chloroplast) [Olea europaea]
gi|363413081|gb|ADA69916.2| RNA polymerase beta II
subunit (chloroplast) [Olea europaea]
Length = 1390
Score = 253 bits (647), Expect = 3e-65
Identities = 124/128 (96%), Positives = 125/128 (97%)
Frame = +1
Query: 1 ARKGVVDTAVRTSDAGYLTRRLVEVVQHIVVRRRDCGTVRGISVSPRNGMMPERIFIQTL 180
ARKGVVDTAVRTSDAGYLTRRLVEVVQHIVVRR DCGT RGISVSPRNGMMPERIFIQTL
Sbjct: 185 ARKGVVDTAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTTRGISVSPRNGMMPERIFIQTL 244
Query: 181 MGRVLADDIYMGTRCIATRNQDIGIGLVNRFITFRAQPISIRTPFTCRSASWICRLCYGR 360
MGRVLADDIY GTRCIA+RNQDIGIGLVNRFITFRAQPISIRTPFTCRSASWICRLCYGR
Sbjct: 245 MGRVLADDIYTGTRCIASRNQDIGIGLVNRFITFRAQPISIRTPFTCRSASWICRLCYGR 304
Query: 361 SPTHGDLV 384
SPTHGDLV
Sbjct: 305 SPTHGDLV 312
>ref|YP_004563771.1| RNA polymerase beta'' chain [Olea europaea subsp. cuspidata]
gi|334084940|emb|CBJ04288.1| RNA polymerase beta'' chain
[Olea europaea subsp. cuspidata]
Length = 1394
Score = 253 bits (647), Expect = 3e-65
Identities = 124/128 (96%), Positives = 125/128 (97%)
Frame = +1
Query: 1 ARKGVVDTAVRTSDAGYLTRRLVEVVQHIVVRRRDCGTVRGISVSPRNGMMPERIFIQTL 180
ARKGVVDTAVRTSDAGYLTRRLVEVVQHIVVRR DCGT RGISVSPRNGMMPERIFIQTL
Sbjct: 189 ARKGVVDTAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTTRGISVSPRNGMMPERIFIQTL 248
Query: 181 MGRVLADDIYMGTRCIATRNQDIGIGLVNRFITFRAQPISIRTPFTCRSASWICRLCYGR 360
MGRVLADDIY GTRCIA+RNQDIGIGLVNRFITFRAQPISIRTPFTCRSASWICRLCYGR
Sbjct: 249 MGRVLADDIYTGTRCIASRNQDIGIGLVNRFITFRAQPISIRTPFTCRSASWICRLCYGR 308
Query: 361 SPTHGDLV 384
SPTHGDLV
Sbjct: 309 SPTHGDLV 316
>ref|YP_004563994.1| RNA polymerase beta'' chain [Olea woodiana subsp. woodiana]
gi|334084649|emb|CBS29340.1| RNA polymerase beta'' chain
[Olea woodiana subsp. woodiana]
Length = 1394
Score = 253 bits (647), Expect = 3e-65
Identities = 124/128 (96%), Positives = 125/128 (97%)
Frame = +1
Query: 1 ARKGVVDTAVRTSDAGYLTRRLVEVVQHIVVRRRDCGTVRGISVSPRNGMMPERIFIQTL 180
ARKGVVDTAVRTSDAGYLTRRLVEVVQHIVVRR DCGT RGISVSPRNGMMPERIFIQTL
Sbjct: 189 ARKGVVDTAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTTRGISVSPRNGMMPERIFIQTL 248
Query: 181 MGRVLADDIYMGTRCIATRNQDIGIGLVNRFITFRAQPISIRTPFTCRSASWICRLCYGR 360
MGRVLADDIY GTRCIA+RNQDIGIGLVNRFITFRAQPISIRTPFTCRSASWICRLCYGR
Sbjct: 249 MGRVLADDIYTGTRCIASRNQDIGIGLVNRFITFRAQPISIRTPFTCRSASWICRLCYGR 308
Query: 361 SPTHGDLV 384
SPTHGDLV
Sbjct: 309 SPTHGDLV 316
>emb|CBR30396.1| RNA polymerase beta'' chain [Olea europaea subsp. europaea]
Length = 1394
Score = 253 bits (647), Expect = 3e-65
Identities = 124/128 (96%), Positives = 125/128 (97%)
Frame = +1
Query: 1 ARKGVVDTAVRTSDAGYLTRRLVEVVQHIVVRRRDCGTVRGISVSPRNGMMPERIFIQTL 180
ARKGVVDTAVRTSDAGYLTRRLVEVVQHIVVRR DCGT RGISVSPRNGMMPERIFIQTL
Sbjct: 189 ARKGVVDTAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTTRGISVSPRNGMMPERIFIQTL 248
Query: 181 MGRVLADDIYMGTRCIATRNQDIGIGLVNRFITFRAQPISIRTPFTCRSASWICRLCYGR 360
MGRVLADDIY GTRCIA+RNQDIGIGLVNRFITFRAQPISIRTPFTCRSASWICRLCYGR
Sbjct: 249 MGRVLADDIYTGTRCIASRNQDIGIGLVNRFITFRAQPISIRTPFTCRSASWICRLCYGR 308
Query: 361 SPTHGDLV 384
SPTHGDLV
Sbjct: 309 SPTHGDLV 316
>ref|YP_004376411.1| RNA polymerase beta'' chain [Olea europaea subsp. europaea]
gi|334701878|ref|YP_004564487.1| RNA polymerase beta''
chain [Olea europaea subsp. maroccana]
gi|328795423|emb|CBR30304.1| RNA polymerase beta'' chain
[Olea europaea subsp. europaea]
gi|334084391|emb|CBR23819.1| RNA polymerase beta'' chain
[Olea europaea subsp. cuspidata]
gi|334084854|emb|CBS29226.1| RNA polymerase beta'' chain
[Olea europaea subsp. maroccana]
gi|334085026|emb|CBR23728.1| RNA polymerase beta'' chain
[Olea europaea subsp. cuspidata]
Length = 1394
Score = 253 bits (647), Expect = 3e-65
Identities = 124/128 (96%), Positives = 125/128 (97%)
Frame = +1
Query: 1 ARKGVVDTAVRTSDAGYLTRRLVEVVQHIVVRRRDCGTVRGISVSPRNGMMPERIFIQTL 180
ARKGVVDTAVRTSDAGYLTRRLVEVVQHIVVRR DCGT RGISVSPRNGMMPERIFIQTL
Sbjct: 189 ARKGVVDTAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTTRGISVSPRNGMMPERIFIQTL 248
Query: 181 MGRVLADDIYMGTRCIATRNQDIGIGLVNRFITFRAQPISIRTPFTCRSASWICRLCYGR 360
MGRVLADDIY GTRCIA+RNQDIGIGLVNRFITFRAQPISIRTPFTCRSASWICRLCYGR
Sbjct: 249 MGRVLADDIYTGTRCIASRNQDIGIGLVNRFITFRAQPISIRTPFTCRSASWICRLCYGR 308
Query: 361 SPTHGDLV 384
SPTHGDLV
Sbjct: 309 SPTHGDLV 316
>gb|ADD72079.1| RNA polymerase beta' subunit [Olea europaea]
gi|334084477|emb|CBR24610.1| RNA polymerase beta'' chain
[Olea europaea subsp. europaea]
gi|510934394|emb|CCQ09092.1| RNA polymerase beta'' chain
(chloroplast) [Olea europaea subsp. europaea]
Length = 1394
Score = 253 bits (647), Expect = 3e-65
Identities = 124/128 (96%), Positives = 125/128 (97%)
Frame = +1
Query: 1 ARKGVVDTAVRTSDAGYLTRRLVEVVQHIVVRRRDCGTVRGISVSPRNGMMPERIFIQTL 180
ARKGVVDTAVRTSDAGYLTRRLVEVVQHIVVRR DCGT RGISVSPRNGMMPERIFIQTL
Sbjct: 189 ARKGVVDTAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTTRGISVSPRNGMMPERIFIQTL 248
Query: 181 MGRVLADDIYMGTRCIATRNQDIGIGLVNRFITFRAQPISIRTPFTCRSASWICRLCYGR 360
MGRVLADDIY GTRCIA+RNQDIGIGLVNRFITFRAQPISIRTPFTCRSASWICRLCYGR
Sbjct: 249 MGRVLADDIYTGTRCIASRNQDIGIGLVNRFITFRAQPISIRTPFTCRSASWICRLCYGR 308
Query: 361 SPTHGDLV 384
SPTHGDLV
Sbjct: 309 SPTHGDLV 316
>ref|YP_778480.1| RNA polymerase beta'' subunit [Jasminum nudiflorum]
gi|122164983|sp|Q06RE1.1|RPOC2_JASNU RecName:
Full=DNA-directed RNA polymerase subunit beta'';
AltName: Full=PEP; AltName: Full=Plastid-encoded RNA
polymerase subunit beta''; Short=RNA polymerase subunit
beta'' (chloroplast) [Jasminum nudiflorum]
gi|110456213|gb|ABG74618.1| RNA polymerase beta II
subunit [Jasminum nudiflorum]
Length = 1397
Score = 253 bits (646), Expect = 4e-65
Identities = 121/128 (94%), Positives = 126/128 (98%)
Frame = +1
Query: 1 ARKGVVDTAVRTSDAGYLTRRLVEVVQHIVVRRRDCGTVRGISVSPRNGMMPERIFIQTL 180
ARKGVVDTAVRTSDAGYLTRRLVEVVQHIVVRR DCGT+RGIS+SPRNGMMPER+FIQTL
Sbjct: 189 ARKGVVDTAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTIRGISLSPRNGMMPERVFIQTL 248
Query: 181 MGRVLADDIYMGTRCIATRNQDIGIGLVNRFITFRAQPISIRTPFTCRSASWICRLCYGR 360
MGRVLADDIY+GTRC+ATRNQDIGIGLVNRFITFRAQPISIRTPFTCRSASWICR CYGR
Sbjct: 249 MGRVLADDIYIGTRCLATRNQDIGIGLVNRFITFRAQPISIRTPFTCRSASWICRFCYGR 308
Query: 361 SPTHGDLV 384
SPTHGDLV
Sbjct: 309 SPTHGDLV 316
>gb|ADD31149.1| RNA polymerase beta'' subunit protein (chloroplast) [Antirrhinum
majus]
Length = 1361
Score = 253 bits (645), Expect = 5e-65
Identities = 123/128 (96%), Positives = 125/128 (97%)
Frame = +1
Query: 1 ARKGVVDTAVRTSDAGYLTRRLVEVVQHIVVRRRDCGTVRGISVSPRNGMMPERIFIQTL 180
ARKGVVDTAVRTSDAGYLTRRLVEVVQHIVVRR DCGT RGISVSPRNGMMPERIFIQTL
Sbjct: 189 ARKGVVDTAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTARGISVSPRNGMMPERIFIQTL 248
Query: 181 MGRVLADDIYMGTRCIATRNQDIGIGLVNRFITFRAQPISIRTPFTCRSASWICRLCYGR 360
+GRVLADDIYMGTRCIATRNQDIGIGLVNRFITF+AQPI IRTPFTCRSASWICRLCYGR
Sbjct: 249 IGRVLADDIYMGTRCIATRNQDIGIGLVNRFITFQAQPIDIRTPFTCRSASWICRLCYGR 308
Query: 361 SPTHGDLV 384
SPTHGDLV
Sbjct: 309 SPTHGDLV 316
>ref|YP_009110592.1| RNA polymerase beta'' chain (chloroplast) [Hesperelaea palmeri]
gi|725798276|emb|CED79752.1| RNA polymerase beta'' chain
(chloroplast) [Hesperelaea palmeri]
Length = 1394
Score = 252 bits (644), Expect = 6e-65
Identities = 123/128 (96%), Positives = 125/128 (97%)
Frame = +1
Query: 1 ARKGVVDTAVRTSDAGYLTRRLVEVVQHIVVRRRDCGTVRGISVSPRNGMMPERIFIQTL 180
ARKGVVDTAVRTSDAGYLTRRLVEVVQHIVVRR DCGT+RGISVSPRNGMMPERI IQTL
Sbjct: 189 ARKGVVDTAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTIRGISVSPRNGMMPERILIQTL 248
Query: 181 MGRVLADDIYMGTRCIATRNQDIGIGLVNRFITFRAQPISIRTPFTCRSASWICRLCYGR 360
MGRVLADDIY GTRCIA+RNQDIGIGLVNRFITFRAQPISIRTPFTCRSASWICRLCYGR
Sbjct: 249 MGRVLADDIYTGTRCIASRNQDIGIGLVNRFITFRAQPISIRTPFTCRSASWICRLCYGR 308
Query: 361 SPTHGDLV 384
SPTHGDLV
Sbjct: 309 SPTHGDLV 316
>gb|AII18685.1| RNA polymerase beta' subunit, partial (chloroplast) [Viburnum
vernicosum]
Length = 1361
Score = 252 bits (643), Expect = 8e-65
Identities = 123/128 (96%), Positives = 124/128 (96%)
Frame = +1
Query: 1 ARKGVVDTAVRTSDAGYLTRRLVEVVQHIVVRRRDCGTVRGISVSPRNGMMPERIFIQTL 180
ARKGVVDTAVRTSDAGYLTRRLVEVVQHIVVRR DCGT RGISVSPRNGMMPERIFIQTL
Sbjct: 180 ARKGVVDTAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTARGISVSPRNGMMPERIFIQTL 239
Query: 181 MGRVLADDIYMGTRCIATRNQDIGIGLVNRFITFRAQPISIRTPFTCRSASWICRLCYGR 360
+GRVLADDIYMG RCIATRNQDIGIGLVNRFITFRAQPISIRTPFTCRS SWICRLCYGR
Sbjct: 240 IGRVLADDIYMGPRCIATRNQDIGIGLVNRFITFRAQPISIRTPFTCRSTSWICRLCYGR 299
Query: 361 SPTHGDLV 384
SPTHGDLV
Sbjct: 300 SPTHGDLV 307
>gb|AII18682.1| RNA polymerase beta' subunit, partial (chloroplast) [Viburnum
taiwanianum]
Length = 1384
Score = 252 bits (643), Expect = 8e-65
Identities = 123/128 (96%), Positives = 124/128 (96%)
Frame = +1
Query: 1 ARKGVVDTAVRTSDAGYLTRRLVEVVQHIVVRRRDCGTVRGISVSPRNGMMPERIFIQTL 180
ARKGVVDTAVRTSDAGYLTRRLVEVVQHIVVRR DCGT RGISVSPRNGMMPERIFIQTL
Sbjct: 189 ARKGVVDTAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTARGISVSPRNGMMPERIFIQTL 248
Query: 181 MGRVLADDIYMGTRCIATRNQDIGIGLVNRFITFRAQPISIRTPFTCRSASWICRLCYGR 360
+GRVLADDIYMG RCIATRNQDIGIGLVNRFITFRAQPISIRTPFTCRS SWICRLCYGR
Sbjct: 249 IGRVLADDIYMGPRCIATRNQDIGIGLVNRFITFRAQPISIRTPFTCRSTSWICRLCYGR 308
Query: 361 SPTHGDLV 384
SPTHGDLV
Sbjct: 309 SPTHGDLV 316