BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Forsythia21_contig00034103
         (819 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011085577.1| PREDICTED: DNA-directed RNA polymerase 2, ch...   262   2e-67
emb|CDP02357.1| unnamed protein product [Coffea canephora]            210   1e-51
ref|XP_009619460.1| PREDICTED: DNA-directed RNA polymerase 2B, c...   197   5e-48
dbj|BAB78464.1| T7 bacteriophage-type single subunit RNA polymer...   196   1e-47
ref|NP_001289520.1| DNA-directed RNA polymerase 2, chloroplastic...   196   1e-47
sp|Q8L6J3.2|RPO2B_TOBAC RecName: Full=DNA-directed RNA polymeras...   196   1e-47
ref|XP_006338320.1| PREDICTED: DNA-directed RNA polymerase 2, ch...   177   6e-42
ref|XP_004232127.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed...   176   2e-41
ref|XP_002278535.1| PREDICTED: DNA-directed RNA polymerase 2, ch...   173   1e-40
ref|XP_007032921.1| DNA/RNA polymerases superfamily protein [The...   169   3e-39
ref|XP_010694421.1| PREDICTED: DNA-directed RNA polymerase 2, ch...   160   7e-37
ref|XP_008230318.1| PREDICTED: DNA-directed RNA polymerase 2, ch...   158   5e-36
ref|XP_008230317.1| PREDICTED: DNA-directed RNA polymerase 2, ch...   158   5e-36
ref|XP_007214918.1| hypothetical protein PRUPE_ppa000719mg [Prun...   157   1e-35
ref|XP_009378288.1| PREDICTED: DNA-directed RNA polymerase 2B, c...   155   3e-35
ref|XP_009373754.1| PREDICTED: DNA-directed RNA polymerase 2B, c...   151   4e-34
emb|CAC80138.1| DNA-dependent RNA polymerase [Spinacia oleracea]      150   7e-34
ref|XP_008379468.1| PREDICTED: DNA-directed RNA polymerase 2, ch...   150   9e-34
ref|XP_012835044.1| PREDICTED: DNA-directed RNA polymerase 2B, c...   147   8e-33
ref|XP_006384251.1| hypothetical protein POPTR_0004s11060g [Popu...   146   1e-32

>ref|XP_011085577.1| PREDICTED: DNA-directed RNA polymerase 2,
           chloroplastic/mitochondrial [Sesamum indicum]
          Length = 1032

 Score =  262 bits (670), Expect = 2e-67
 Identities = 139/224 (62%), Positives = 166/224 (74%)
 Frame = -1

Query: 675 MSSCKLPLSLSIKIDRPKIPVGKPAVIFLDLPNNSPVMLRKFVKQATSKNPTKLSLNPQS 496
           MSS K P+S   KID  + P  KP V+ L+   +  VM R  VKQ +S+ P KL  N +S
Sbjct: 1   MSSSKTPISFGFKIDNSRTPFHKP-VLILNPYRDCRVMWRNIVKQVSSRTPLKLCRNSES 59

Query: 495 FSRTCSFLGFSQDSTFPEKFKFRPLFELNSSSNVCYPELGLRKIGDFFTRDEVMGRPILS 316
            SRTCSFLG +Q+S FP+KFKFRPLFELNS    C+PELG +K+GDF +RDE    P   
Sbjct: 60  LSRTCSFLGSAQESAFPDKFKFRPLFELNSRPTFCFPELGFQKLGDFSSRDEFSPFP--- 116

Query: 315 GVRSQVNTYGLCPKSYASVAEAVEVSPTDVEEDFNNVNVSVADEVQELLTEVKKEERRQY 136
             R+Q+N  GLC KSYASVAEAV VS TD+ E+ N+VNVSVADEVQELL EV+KEERRQY
Sbjct: 117 -ARNQINWNGLCFKSYASVAEAVAVSQTDLVEE-NSVNVSVADEVQELLNEVRKEERRQY 174

Query: 135 STRWRQQRMVRGMGKQKYQVLRRRQARIETEAWEQAAKEYKELL 4
            TRWRQ+R VRGMG ++Y+ LRRRQ +IETEAW QAAKEY+ELL
Sbjct: 175 WTRWRQRRSVRGMGNERYKALRRRQVKIETEAWGQAAKEYRELL 218


>emb|CDP02357.1| unnamed protein product [Coffea canephora]
          Length = 1040

 Score =  210 bits (534), Expect = 1e-51
 Identities = 124/230 (53%), Positives = 149/230 (64%), Gaps = 6/230 (2%)
 Frame = -1

Query: 675 MSSCKLPLSLSIKIDR-PKIPVGKPAVIFLDLPNNSPVMLRKFVKQATSKNPTKLSL--- 508
           MSS K P+SL+I I R    PV KP +  L  P  S VM +   K  +S+          
Sbjct: 1   MSSTKSPISLNINIGRLTPNPVYKPRIFLLKPPEISTVMWKNIAKLVSSRTLRTQEFGSI 60

Query: 507 -NPQSFSRTCSFLGFSQDSTFPEKFKFRPLFELNSSSNVCYPELGLRKIGDFFTRDEVMG 331
            NP S  RT SFLGFSQDS FPEKFKF  L + N  S   + E G RK+G+F TRDE + 
Sbjct: 61  FNPHSLPRTYSFLGFSQDSIFPEKFKFSTL-DFNPCSGNGFLEQGFRKVGEFSTRDEFLA 119

Query: 330 RPILSGVRSQVNTYGLCPKSYASVAEAVEVSPTDVEEDFNNVNVSVADEVQELLTEVKKE 151
           RP L+  R+Q++  GL  KSYAS+AEA+ VS TDVEED    +V  ADEV ELL+E+KKE
Sbjct: 120 RPSLNFARNQISINGLSQKSYASLAEAIAVSSTDVEED---TSVVAADEVHELLSEMKKE 176

Query: 150 ERRQYSTRWRQ-QRMVRGMGKQKYQVLRRRQARIETEAWEQAAKEYKELL 4
           +RRQ S RWR+  R V GMG +KY  L+RRQ +IETEAWEQAA EYKELL
Sbjct: 177 DRRQMSFRWRKHHRAVYGMGSKKYHALKRRQVKIETEAWEQAANEYKELL 226


>ref|XP_009619460.1| PREDICTED: DNA-directed RNA polymerase 2B,
           chloroplastic/mitochondrial [Nicotiana tomentosiformis]
          Length = 1021

 Score =  197 bits (502), Expect = 5e-48
 Identities = 117/226 (51%), Positives = 156/226 (69%), Gaps = 2/226 (0%)
 Frame = -1

Query: 675 MSSCKLPLSLSIKIDRPKIPVGKPAVIFLDLPNNSPVMLRKFVKQATSKNPTKLSLNPQS 496
           MSS K P+SL+IK+++      KP  + ++  +NSP+M R  +KQ +S+ P KL  +  S
Sbjct: 1   MSSTKTPISLTIKLNQF---TDKPTGLDINRYHNSPIMWRNIIKQLSSRTPQKLLFS--S 55

Query: 495 FSRTCSFLGFSQDSTFPEKFKFRPLFELNSSSNVCYPELGLRKIGDFFTRDEVMGRPILS 316
            +RT SFLGF QDS F +  KFR L  ++ S+ V    +G + +G++   DE + RP+L 
Sbjct: 56  KNRTYSFLGFGQDSVFKDNTKFRSLIPISCSNIV----MGFQNLGEYLPGDEFLSRPLL- 110

Query: 315 GVRSQVNTYGLC-PKSYASVAEAVEVSPTDVEEDFNNVNVSVADEVQELLTEVKKEERRQ 139
             +SQVN+   C  KSYASVAEAV VS TD EED     VSV DEVQELLTE+KKEE++Q
Sbjct: 111 --KSQVNSNDFCCRKSYASVAEAVAVSSTDAEED-----VSVVDEVQELLTELKKEEKKQ 163

Query: 138 YSTRWRQQRMVR-GMGKQKYQVLRRRQARIETEAWEQAAKEYKELL 4
           ++ R R+QRM+  GMG +KYQ L+RRQ ++ETEAWEQAAKEYKELL
Sbjct: 164 FAFRRRKQRMLTSGMGHRKYQTLKRRQVKVETEAWEQAAKEYKELL 209


>dbj|BAB78464.1| T7 bacteriophage-type single subunit RNA polymerase [Nicotiana
           sylvestris] gi|17221595|dbj|BAB78465.1| T7
           bacteriophage-type single subunit RNA polymerase
           [Nicotiana sylvestris]
          Length = 1020

 Score =  196 bits (499), Expect = 1e-47
 Identities = 114/225 (50%), Positives = 154/225 (68%), Gaps = 1/225 (0%)
 Frame = -1

Query: 675 MSSCKLPLSLSIKIDRPKIPVGKPAVIFLDLPNNSPVMLRKFVKQATSKNPTKLSLNPQS 496
           MSS K P+SL+IK+++      KP  + ++  +NSP+M R  +KQ +S+ P KL  +  S
Sbjct: 1   MSSTKTPISLTIKLNQF---TDKPTGLDINPYHNSPIMWRNIIKQLSSRTPQKLLFS--S 55

Query: 495 FSRTCSFLGFSQDSTFPEKFKFRPLFELNSSSNVCYPELGLRKIGDFFTRDEVMGRPILS 316
            +RT SFLGF QDS F +  KFR L  ++ S+ V    +G + +G++   DE + RP+  
Sbjct: 56  KNRTYSFLGFGQDSIFKDNTKFRSLIPISCSNIV----MGFQNLGEYLPGDEFLSRPL-- 109

Query: 315 GVRSQVNTYGLCPKSYASVAEAVEVSPTDVEEDFNNVNVSVADEVQELLTEVKKEERRQY 136
            +++QVN    C KSYASVAEAV VS TD EED     VSV DEV ELLTE+KKEE++Q+
Sbjct: 110 -IKNQVNNNFCCRKSYASVAEAVAVSSTDAEED-----VSVVDEVHELLTELKKEEKKQF 163

Query: 135 STRWRQQRMVR-GMGKQKYQVLRRRQARIETEAWEQAAKEYKELL 4
           + R R+QRM+  GMG +KYQ L+RRQ ++ETEAWEQAAKEYKELL
Sbjct: 164 AFRRRKQRMLTSGMGHRKYQTLKRRQVKVETEAWEQAAKEYKELL 208


>ref|NP_001289520.1| DNA-directed RNA polymerase 2, chloroplastic/mitochondrial
           [Nicotiana sylvestris]
           gi|90111039|sp|Q8VWF8.2|RPOT2_NICSY RecName:
           Full=DNA-directed RNA polymerase 2,
           chloroplastic/mitochondrial; AltName: Full=NsRpoT-B;
           AltName: Full=T7 bacteriophage-type single subunit RNA
           polymerase 2; Flags: Precursor [Nicotiana sylvestris]
           gi|21425639|emb|CAC82575.2| phage-type RNA polymerase
           [Nicotiana sylvestris]
          Length = 1020

 Score =  196 bits (499), Expect = 1e-47
 Identities = 114/225 (50%), Positives = 154/225 (68%), Gaps = 1/225 (0%)
 Frame = -1

Query: 675 MSSCKLPLSLSIKIDRPKIPVGKPAVIFLDLPNNSPVMLRKFVKQATSKNPTKLSLNPQS 496
           MSS K P+SL+IK+++      KP  + ++  +NSP+M R  +KQ +S+ P KL  +  S
Sbjct: 1   MSSTKTPISLTIKLNQF---TDKPTGLDINPYHNSPIMWRNIIKQLSSRTPQKLLFS--S 55

Query: 495 FSRTCSFLGFSQDSTFPEKFKFRPLFELNSSSNVCYPELGLRKIGDFFTRDEVMGRPILS 316
            +RT SFLGF QDS F +  KFR L  ++ S+ V    +G + +G++   DE + RP+  
Sbjct: 56  KNRTYSFLGFGQDSIFKDNTKFRSLIPISCSNIV----MGFQNLGEYLPGDEFLSRPL-- 109

Query: 315 GVRSQVNTYGLCPKSYASVAEAVEVSPTDVEEDFNNVNVSVADEVQELLTEVKKEERRQY 136
            +++QVN    C KSYASVAEAV VS TD EED     VSV DEV ELLTE+KKEE++Q+
Sbjct: 110 -IKNQVNNNFCCRKSYASVAEAVAVSSTDAEED-----VSVVDEVHELLTELKKEEKKQF 163

Query: 135 STRWRQQRMVR-GMGKQKYQVLRRRQARIETEAWEQAAKEYKELL 4
           + R R+QRM+  GMG +KYQ L+RRQ ++ETEAWEQAAKEYKELL
Sbjct: 164 AFRRRKQRMLTSGMGHRKYQTLKRRQVKVETEAWEQAAKEYKELL 208


>sp|Q8L6J3.2|RPO2B_TOBAC RecName: Full=DNA-directed RNA polymerase 2B,
           chloroplastic/mitochondrial; AltName:
           Full=NictaRpoT2-tom; AltName: Full=T7 bacteriophage-type
           single subunit RNA polymerase 2B; Flags: Precursor
           [Nicotiana tabacum] gi|21425665|emb|CAC95020.1|
           mitochondrial and chloroplast RNA polymerase [Nicotiana
           tabacum]
          Length = 1021

 Score =  196 bits (499), Expect = 1e-47
 Identities = 116/226 (51%), Positives = 156/226 (69%), Gaps = 2/226 (0%)
 Frame = -1

Query: 675 MSSCKLPLSLSIKIDRPKIPVGKPAVIFLDLPNNSPVMLRKFVKQATSKNPTKLSLNPQS 496
           MSS K P+SL+IK+++      KP  + ++  +NSP+M R  +KQ +S+ P KL  +  S
Sbjct: 1   MSSTKTPISLTIKLNQF---TDKPTGLDINRYHNSPIMWRNIIKQLSSRTPQKLLFS--S 55

Query: 495 FSRTCSFLGFSQDSTFPEKFKFRPLFELNSSSNVCYPELGLRKIGDFFTRDEVMGRPILS 316
            +RT SFLGF QDS F +  KFR L  ++ S+ V    +G + +G++   DE + RP+L 
Sbjct: 56  KNRTYSFLGFGQDSVFKDNTKFRSLIPISCSNIV----MGFQNLGEYLPGDEFLSRPLL- 110

Query: 315 GVRSQVNTYGLC-PKSYASVAEAVEVSPTDVEEDFNNVNVSVADEVQELLTEVKKEERRQ 139
             ++QVN+   C  KSYASVAEAV VS TD EED     VSV DEVQELLTE+KKEE++Q
Sbjct: 111 --KNQVNSNDFCCRKSYASVAEAVAVSSTDAEED-----VSVVDEVQELLTELKKEEKKQ 163

Query: 138 YSTRWRQQRMVR-GMGKQKYQVLRRRQARIETEAWEQAAKEYKELL 4
           ++ R R+QRM+  GMG +KYQ L+RRQ ++ETEAWEQAAKEYKELL
Sbjct: 164 FAFRRRKQRMLTSGMGHRKYQTLKRRQVKVETEAWEQAAKEYKELL 209


>ref|XP_006338320.1| PREDICTED: DNA-directed RNA polymerase 2,
           chloroplastic/mitochondrial-like [Solanum tuberosum]
          Length = 1019

 Score =  177 bits (450), Expect = 6e-42
 Identities = 109/225 (48%), Positives = 145/225 (64%), Gaps = 1/225 (0%)
 Frame = -1

Query: 675 MSSCKLPLSLSIKIDRPKIPVGKPAVIFLDLPNNSPVMLRKFVKQATSKNPTKLSLNPQS 496
           MS  K P+SL+IK ++       P         NSP+M R  VKQ +S+ P K+ L   S
Sbjct: 1   MSCTKTPISLTIKFNQFTNLETNPY-------QNSPIMWRNIVKQFSSRTPQKILLT--S 51

Query: 495 FSRTCSFLGFSQDSTFPEKFKFRPLFELNSSSNVCYPELGLRKIGDFFTRDEVMGRPILS 316
            +RT SFLGF QDS F +K   R    + S SN  + E+G + +G+F   DE + RP+L 
Sbjct: 52  KNRTYSFLGFGQDSVFKDKRILRSFIPV-SCSNSGFLEMGFQNLGEF---DEFLRRPLLC 107

Query: 315 GVRSQVNTYGLCPKSYASVAEAVEVSPTDVEEDFNNVNVSVADEVQELLTEVKKEERRQY 136
            ++SQV+   +C KSYASVAEAV VS TD EED     VSV  EVQELLTE+KKEE++Q+
Sbjct: 108 AMKSQVSNNDICRKSYASVAEAVAVSSTDAEED-----VSVVGEVQELLTELKKEEKKQF 162

Query: 135 STRWRQQRMVR-GMGKQKYQVLRRRQARIETEAWEQAAKEYKELL 4
           + R R QR++  G+ ++KY  L+RRQ +IET+AWE AAKEY+ELL
Sbjct: 163 TFRRRNQRLLTSGIDRRKYPALKRRQVKIETQAWELAAKEYRELL 207


>ref|XP_004232127.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase 2B,
           chloroplastic/mitochondrial [Solanum lycopersicum]
          Length = 1022

 Score =  176 bits (445), Expect = 2e-41
 Identities = 106/229 (46%), Positives = 144/229 (62%), Gaps = 5/229 (2%)
 Frame = -1

Query: 675 MSSCKLPLSLSIKIDRPKIPVGKPAVIFLDLPNN----SPVMLRKFVKQATSKNPTKLSL 508
           MS  K P+SL+I+ D+           F DL  N    SP+M R  VKQ +++ P K+ L
Sbjct: 1   MSCTKTPISLTIRFDQ-----------FTDLETNPYHISPIMWRNIVKQFSTRTPQKILL 49

Query: 507 NPQSFSRTCSFLGFSQDSTFPEKFKFRPLFELNSSSNVCYPELGLRKIGDFFTRDEVMGR 328
              S +   S+LGF   S F +K   R    + S SN  + E+G + +G+F   DE + R
Sbjct: 50  T--SKNHAYSYLGFGLHSVFKDKRTLRSFIPV-SCSNSGFLEMGFQNLGEFLPGDEFLRR 106

Query: 327 PILSGVRSQVNTYGLCPKSYASVAEAVEVSPTDVEEDFNNVNVSVADEVQELLTEVKKEE 148
           P+L  ++SQV+   +C K+YASVAEAV VS TD EED     VSV  EVQELLTE+KKEE
Sbjct: 107 PLLCAMKSQVSNNDICRKNYASVAEAVAVSSTDAEED-----VSVVGEVQELLTELKKEE 161

Query: 147 RRQYSTRWRQQRMV-RGMGKQKYQVLRRRQARIETEAWEQAAKEYKELL 4
           ++Q++ R R+QRM+  G+ ++KY  L RRQ +IET+AWEQAAKEY+ELL
Sbjct: 162 KKQFTFRRRKQRMLTSGIDRRKYPALMRRQVKIETQAWEQAAKEYRELL 210


>ref|XP_002278535.1| PREDICTED: DNA-directed RNA polymerase 2,
           chloroplastic/mitochondrial [Vitis vinifera]
           gi|731418092|ref|XP_010660553.1| PREDICTED: DNA-directed
           RNA polymerase 2, chloroplastic/mitochondrial [Vitis
           vinifera] gi|298204431|emb|CBI16911.3| unnamed protein
           product [Vitis vinifera]
          Length = 1035

 Score =  173 bits (439), Expect = 1e-40
 Identities = 114/229 (49%), Positives = 146/229 (63%), Gaps = 4/229 (1%)
 Frame = -1

Query: 675 MSSCKLP-LSLSIKIDRPKIPVGKPAVIFLDLPNNSP-VMLRKFVKQATSKNPTK-LSLN 505
           MSS K P LS ++  D   I   +    F   P   P VM R   K+A  + P K + L+
Sbjct: 1   MSSGKTPILSANLGRDLDLIISFEKPTNFRPNPLKKPTVMWRNIAKRAIPRAPRKCVYLD 60

Query: 504 PQSFSRTCSFLGFSQDSTFPEKFKFRPLFELNSSSNVCYPELGLRKIGDFFTRDEVMGRP 325
            Q  SR  SFLGFSQD  FPE  KF   FE +S S+  + E+G R+IG+  +R++ +GRP
Sbjct: 61  SQPLSRRYSFLGFSQDLIFPEIMKFGT-FEPSSCSSSGFSEMGFRRIGEISSREDAVGRP 119

Query: 324 ILSGVRSQVNTYGLCPKSYASVAEAVEVSPTDVEEDFNNVNVSVADEVQELLTEVKKEER 145
               +R+Q+   G CPKSYASVAEAV  S TDVEED     VS +DE+QELL E+KKEE+
Sbjct: 120 SFGCLRNQMGFSGFCPKSYASVAEAV--SSTDVEED-----VSASDEIQELLGEMKKEEK 172

Query: 144 RQYSTRWRQQ-RMVRGMGKQKYQVLRRRQARIETEAWEQAAKEYKELLM 1
           RQ + + R++ +M RGM + +Y  LRRRQ +IETEAWE AAKEYKELLM
Sbjct: 173 RQVNFKRREKLKMERGMEQGRYLRLRRRQVKIETEAWELAAKEYKELLM 221


>ref|XP_007032921.1| DNA/RNA polymerases superfamily protein [Theobroma cacao]
           gi|508711950|gb|EOY03847.1| DNA/RNA polymerases
           superfamily protein [Theobroma cacao]
          Length = 1100

 Score =  169 bits (427), Expect = 3e-39
 Identities = 106/230 (46%), Positives = 144/230 (62%), Gaps = 5/230 (2%)
 Frame = -1

Query: 675 MSSCKLPLSLSIKIDRPK--IPVGK--PAVIFLDLPNNSPVMLRKFVKQATSKNPTKLSL 508
           MS  + PL  S  +D+    +P+    P++++ + P  S VM R   K A S+       
Sbjct: 1   MSIIETPLISSNLLDKFDHFVPLDNRNPSILYQNPPKISIVMWRNIAKHAISRRTHSF-- 58

Query: 507 NPQSFSRTCSFLGFSQDSTFPEKFKFRPLFELNSSSNVCYPELGLRKIGDFFTRDEVMGR 328
             Q F+RT SFLG SQDS F EK KFR L   +  SN  + ++G R+IG+  T  E +G+
Sbjct: 59  --QCFARTYSFLGTSQDSIFHEKSKFRGLKFGSFCSNSRFLDMGGRRIGEVLTNVEYIGK 116

Query: 327 PILSGVRSQVNTYGLCPKSYASVAEAVEVSPTDVEEDFNNVNVSVADEVQELLTEVKKEE 148
                 R+++   GLCP+ Y SVAEA  VS TDVEED     VSV +E++ELL E+KKE+
Sbjct: 117 QSFGSPRNEIGCSGLCPRGYVSVAEA--VSSTDVEED-----VSVVEEIKELLDEMKKEQ 169

Query: 147 RRQYSTRWRQQRMV-RGMGKQKYQVLRRRQARIETEAWEQAAKEYKELLM 1
           RR+   R R+ +++ RGMG+ KY+ LRRRQ +IETEAWEQAAKEY+ELLM
Sbjct: 170 RRETGNRRRRCQIIERGMGESKYRFLRRRQVKIETEAWEQAAKEYRELLM 219


>ref|XP_010694421.1| PREDICTED: DNA-directed RNA polymerase 2,
           chloroplastic/mitochondrial-like [Beta vulgaris subsp.
           vulgaris] gi|870867851|gb|KMT18720.1| hypothetical
           protein BVRB_2g028430 [Beta vulgaris subsp. vulgaris]
          Length = 1036

 Score =  160 bits (406), Expect = 7e-37
 Identities = 103/222 (46%), Positives = 133/222 (59%), Gaps = 3/222 (1%)
 Frame = -1

Query: 660 LPLSLSIKIDRPKIPVGKPAVIFLDLPN-NSPVMLRKFVKQATSKNPTKLSLNPQSFSRT 484
           LP +LS K D P I + K    F+  P  NS VM   F KQA S+ P +L     S SR 
Sbjct: 9   LPANLSQKFD-PSIQIHKSRSNFVINPFFNSTVMWENFAKQAISRTP-RLCFKSFSLSRN 66

Query: 483 CSFLGFSQDSTFPEKFKFRPLFELNSSSNVCYPELGLRKIGDFFTRDEVMGRPILSGVRS 304
            SFLG S DS   EK KFRP FEL    NV +PELG  + G    ++E+  RPI   + +
Sbjct: 67  YSFLGVSCDSVIAEKLKFRP-FELGFCKNVNFPELGFCRKGGPLVKEEMGERPIFGCLSN 125

Query: 303 QVNTYGLCPKSYASVAEAVEVSPTDVEEDFNNVNVSVADEVQELLTEVKKEERRQ--YST 130
           Q N   LCPK YASV EA  V+ +D E+D     VSV DE+QEL+ E++K E+R      
Sbjct: 126 QPNLKVLCPKGYASVVEAELVTSSDYEDD-----VSVFDEIQELVEEMRKVEKRAKWRDI 180

Query: 129 RWRQQRMVRGMGKQKYQVLRRRQARIETEAWEQAAKEYKELL 4
           R R+ +MV G+   +YQ+LR RQ ++ETE+W+QAA EY+ELL
Sbjct: 181 RQRKPKMVAGLPSYRYQMLRNRQIKLETESWQQAANEYRELL 222


>ref|XP_008230318.1| PREDICTED: DNA-directed RNA polymerase 2,
           chloroplastic/mitochondrial isoform X2 [Prunus mume]
          Length = 862

 Score =  158 bits (399), Expect = 5e-36
 Identities = 107/232 (46%), Positives = 137/232 (59%), Gaps = 7/232 (3%)
 Frame = -1

Query: 675 MSSCKLPLS-----LSIKIDRPKIPVGKPAVIFLDLPNNSPVMLRKFVKQATSKNPTKLS 511
           MSS + PLS      +     P I    P++I       S  + R F KQA S+   +  
Sbjct: 1   MSSSQTPLSPANISKNFTFHSPLIFHKNPSMI-------STTVWRNFAKQAISRKQ-RFH 52

Query: 510 LNPQSFSRTCSFLGFSQDSTFPEKFKFRPLFELNSSSNVCYPELGLRKIGDFFTRDEVMG 331
           +N QSFSR  S L   Q+S FP  FK    FEL+S S++ + E+G R  G   + ++ M 
Sbjct: 53  INSQSFSRAYSLLRICQESVFPGNFK---PFELSSCSSLRFSEVGFRGKGTISSPEDCMC 109

Query: 330 RPILSGVRSQVNTYGLCPKSYASVAEAVEVSPTDVEEDFNNVNVSVADEVQELLTEVKKE 151
           +P    VR+ +   G CPK YASVAEAV  S TDVEED     VSV DEVQELL ++  E
Sbjct: 110 KPSFWSVRNPIGFNGFCPKGYASVAEAV--SSTDVEED-----VSVVDEVQELLQQMSIE 162

Query: 150 ERR--QYSTRWRQQRMVRGMGKQKYQVLRRRQARIETEAWEQAAKEYKELLM 1
           E+R  QY  R RQ R  RGMG+ KY +L+RRQ +IETEAWE+AAKEY+EL+M
Sbjct: 163 EKREAQYKQRTRQNR-ARGMGQGKYHMLKRRQIKIETEAWERAAKEYRELMM 213


>ref|XP_008230317.1| PREDICTED: DNA-directed RNA polymerase 2,
           chloroplastic/mitochondrial isoform X1 [Prunus mume]
          Length = 1024

 Score =  158 bits (399), Expect = 5e-36
 Identities = 107/232 (46%), Positives = 137/232 (59%), Gaps = 7/232 (3%)
 Frame = -1

Query: 675 MSSCKLPLS-----LSIKIDRPKIPVGKPAVIFLDLPNNSPVMLRKFVKQATSKNPTKLS 511
           MSS + PLS      +     P I    P++I       S  + R F KQA S+   +  
Sbjct: 1   MSSSQTPLSPANISKNFTFHSPLIFHKNPSMI-------STTVWRNFAKQAISRKQ-RFH 52

Query: 510 LNPQSFSRTCSFLGFSQDSTFPEKFKFRPLFELNSSSNVCYPELGLRKIGDFFTRDEVMG 331
           +N QSFSR  S L   Q+S FP  FK    FEL+S S++ + E+G R  G   + ++ M 
Sbjct: 53  INSQSFSRAYSLLRICQESVFPGNFK---PFELSSCSSLRFSEVGFRGKGTISSPEDCMC 109

Query: 330 RPILSGVRSQVNTYGLCPKSYASVAEAVEVSPTDVEEDFNNVNVSVADEVQELLTEVKKE 151
           +P    VR+ +   G CPK YASVAEAV  S TDVEED     VSV DEVQELL ++  E
Sbjct: 110 KPSFWSVRNPIGFNGFCPKGYASVAEAV--SSTDVEED-----VSVVDEVQELLQQMSIE 162

Query: 150 ERR--QYSTRWRQQRMVRGMGKQKYQVLRRRQARIETEAWEQAAKEYKELLM 1
           E+R  QY  R RQ R  RGMG+ KY +L+RRQ +IETEAWE+AAKEY+EL+M
Sbjct: 163 EKREAQYKQRTRQNR-ARGMGQGKYHMLKRRQIKIETEAWERAAKEYRELMM 213


>ref|XP_007214918.1| hypothetical protein PRUPE_ppa000719mg [Prunus persica]
           gi|462411068|gb|EMJ16117.1| hypothetical protein
           PRUPE_ppa000719mg [Prunus persica]
          Length = 1024

 Score =  157 bits (396), Expect = 1e-35
 Identities = 97/193 (50%), Positives = 124/193 (64%), Gaps = 2/193 (1%)
 Frame = -1

Query: 573 SPVMLRKFVKQATSKNPTKLSLNPQSFSRTCSFLGFSQDSTFPEKFKFRPLFELNSSSNV 394
           S  + R F KQA S+   +  +N QSFSR  S LG  Q+S FP  FK    FEL+S S++
Sbjct: 33  STTVWRNFAKQAISRKQ-RFHINSQSFSRAYSLLGICQESVFPGNFK---PFELSSCSSL 88

Query: 393 CYPELGLRKIGDFFTRDEVMGRPILSGVRSQVNTYGLCPKSYASVAEAVEVSPTDVEEDF 214
            + E+G R  G   + ++ M +P    VR+ +   G CPK YASVAEAV  S TDVEE+ 
Sbjct: 89  RFSEVGFRGKGAISSPEDCMCKPSFWSVRNPIWFNGFCPKGYASVAEAV--SSTDVEEE- 145

Query: 213 NNVNVSVADEVQELLTEVKKEERR--QYSTRWRQQRMVRGMGKQKYQVLRRRQARIETEA 40
               VSV DEVQELL ++  EE+R  QY  R RQ R  RGMG+ KY +L+RRQ +IETEA
Sbjct: 146 ----VSVVDEVQELLQQMSIEEKREAQYKQRTRQNR-ARGMGQGKYHMLKRRQIKIETEA 200

Query: 39  WEQAAKEYKELLM 1
           WE+AAKEY+EL+M
Sbjct: 201 WERAAKEYRELMM 213


>ref|XP_009378288.1| PREDICTED: DNA-directed RNA polymerase 2B,
           chloroplastic/mitochondrial [Pyrus x bretschneideri]
          Length = 1025

 Score =  155 bits (392), Expect = 3e-35
 Identities = 99/213 (46%), Positives = 130/213 (61%), Gaps = 5/213 (2%)
 Frame = -1

Query: 624 KIPVG---KPAVIFLDLPNNSPVMLRKFVKQATSKNPTKLSLNPQSFSRTCSFLGFSQDS 454
           +IP+G    P++IF  L        R   KQA  +N  +  LN QS SR  S LGFS++S
Sbjct: 20  RIPIGFHKNPSMIFTSL-------WRNLAKQAIPRNQ-RGRLNSQSISRAYSLLGFSRES 71

Query: 453 TFPEKFKFRPLFELNSSSNVCYPELGLRKIGDFFTRDEVMGRPILSGVRSQVNTYGLCPK 274
             P+ FK    F+L S SN+ +PE+G    G+  T +  MG P    VR+ +   G  P+
Sbjct: 72  VSPQSFK---PFQLGSYSNMGFPEVGFPGKGEISTGESYMGNPSYWSVRTPIGFNGFFPR 128

Query: 273 SYASVAEAVEVSPTDVEEDFNNVNVSVADEVQELLTEVKKEERRQYSTRWRQQRM--VRG 100
            YASVAE V  S TD EED     VS+ DEVQELL ++ KE +RQ +  WR+ R+  VRG
Sbjct: 129 GYASVAEVV--SSTDAEED-----VSLVDEVQELLQQMSKEGKRQ-TDHWRRMRLRRVRG 180

Query: 99  MGKQKYQVLRRRQARIETEAWEQAAKEYKELLM 1
           MG+ KY  L+RRQ +IETEAWE+AAKEY+EL+M
Sbjct: 181 MGQAKYFALKRRQIKIETEAWERAAKEYRELMM 213


>ref|XP_009373754.1| PREDICTED: DNA-directed RNA polymerase 2B,
           chloroplastic/mitochondrial-like [Pyrus x
           bretschneideri]
          Length = 1024

 Score =  151 bits (382), Expect = 4e-34
 Identities = 96/193 (49%), Positives = 120/193 (62%), Gaps = 2/193 (1%)
 Frame = -1

Query: 573 SPVMLRKFVKQATSKNPTKLSLNPQSFSRTCSFLGFSQDSTFPEKFKFRPLFELNSSSNV 394
           S  + R   KQA S N  +  L+ QS SR  S L FS++S F EKFK    FE  S    
Sbjct: 33  STSLWRNLAKQAISGNQ-RCRLSSQSISRAYSLLRFSRESVFSEKFK---PFETGSCLKG 88

Query: 393 CYPELGLRKIGDFFTRDEVMGRPILSGVRSQVNTYGLCPKSYASVAEAVEVSPTDVEEDF 214
            +PE+G    G+  + +  MG P L  VR+ +   G CPK YAS+AEAV  S TD EED 
Sbjct: 89  -FPEVGFCGKGEISSGESYMGNPSLGSVRNPIGFNGFCPKGYASIAEAV--SSTDAEED- 144

Query: 213 NNVNVSVADEVQELLTEVKKEERRQYSTRWRQ--QRMVRGMGKQKYQVLRRRQARIETEA 40
               VSV DEVQELL ++ KE +RQ +  WR+  QR VRGMG+ KY  L+RRQ +IETEA
Sbjct: 145 ----VSVVDEVQELLQQMSKEGKRQ-TDHWRRMRQRRVRGMGQAKYLALKRRQIKIETEA 199

Query: 39  WEQAAKEYKELLM 1
           WE+AAKEY+EL+M
Sbjct: 200 WERAAKEYRELMM 212


>emb|CAC80138.1| DNA-dependent RNA polymerase [Spinacia oleracea]
          Length = 1036

 Score =  150 bits (380), Expect = 7e-34
 Identities = 98/221 (44%), Positives = 131/221 (59%), Gaps = 3/221 (1%)
 Frame = -1

Query: 657 PLSLSIKIDRPKIPVGKPAVIFLDLPN-NSPVMLRKFVKQATSKNPTKLSLNPQSFSRTC 481
           P  LS   D P I + K    FL  P  +S +M R F KQA S+ P  L L   S SR+ 
Sbjct: 10  PAVLSQNFD-PYIQIYKSRSNFLINPCFDSTIMWRNFAKQAISRTPN-LCLRKFSISRSY 67

Query: 480 SFLGFSQDSTFPEKFKFRPLFELNSSSNVCYPELGLRKIGDFFTRDEVMGRPILSGVRSQ 301
           SFLG + D  F ++ KFRP FEL    N  + E+G  + G    ++ +  RP+   + ++
Sbjct: 68  SFLGGTHDCGFSDRLKFRP-FELGFCKNRSFSEVGFCREGGSLVKEGIGERPVSGCLGNR 126

Query: 300 VNTYGLCPKSYASVAEAVEVSPTDVEEDFNNVNVSVADEVQELLTEVKKEERRQY--STR 127
           +N   +CPK YASV EA   S TD+E+D     VSV DE+QEL+ E++KEE+R     + 
Sbjct: 127 LNFNVVCPKGYASVVEAEVDSSTDLEDD-----VSVFDEIQELVEEMRKEEKRAKWRESH 181

Query: 126 WRQQRMVRGMGKQKYQVLRRRQARIETEAWEQAAKEYKELL 4
            RQQ+MV GM   KYQ LR RQ ++ETE+W+QAA EYKELL
Sbjct: 182 QRQQKMVAGMPLYKYQKLRNRQIKLETESWQQAANEYKELL 222


>ref|XP_008379468.1| PREDICTED: DNA-directed RNA polymerase 2,
           chloroplastic/mitochondrial [Malus domestica]
          Length = 1025

 Score =  150 bits (379), Expect = 9e-34
 Identities = 97/213 (45%), Positives = 128/213 (60%), Gaps = 5/213 (2%)
 Frame = -1

Query: 624 KIPVG---KPAVIFLDLPNNSPVMLRKFVKQATSKNPTKLSLNPQSFSRTCSFLGFSQDS 454
           +IP+G    P++I       S  + R   KQA  +N  +  LN QS SR  S L FS +S
Sbjct: 20  RIPIGFHKNPSMI-------STSLWRNLAKQAIPRNQ-RGRLNSQSISRAYSLLCFSXES 71

Query: 453 TFPEKFKFRPLFELNSSSNVCYPELGLRKIGDFFTRDEVMGRPILSGVRSQVNTYGLCPK 274
             P+ FK    F+L S SN+ +PE+G    G+  T +  +G P    VR+ +   G C K
Sbjct: 72  VSPQXFK---PFQLGSYSNMGFPEVGFPGKGEISTSESYLGNPSYWSVRTPIGFNGFCAK 128

Query: 273 SYASVAEAVEVSPTDVEEDFNNVNVSVADEVQELLTEVKKEERRQYSTRWRQQRM--VRG 100
            YASVAE V  S TD EED     VS+ DEVQELL ++ KE +RQ +  WR+ R+  VRG
Sbjct: 129 GYASVAEVV--SSTDAEED-----VSLVDEVQELLQQMSKEGKRQ-TDHWRRMRLRRVRG 180

Query: 99  MGKQKYQVLRRRQARIETEAWEQAAKEYKELLM 1
           MG+ KY  L+RRQ +IETEAWE+AAKEY+EL+M
Sbjct: 181 MGQAKYLALKRRQIKIETEAWERAAKEYRELMM 213


>ref|XP_012835044.1| PREDICTED: DNA-directed RNA polymerase 2B,
           chloroplastic/mitochondrial [Erythranthe guttatus]
           gi|604335441|gb|EYU39350.1| hypothetical protein
           MIMGU_mgv1a000681mg [Erythranthe guttata]
          Length = 1021

 Score =  147 bits (371), Expect = 8e-33
 Identities = 109/236 (46%), Positives = 136/236 (57%), Gaps = 12/236 (5%)
 Frame = -1

Query: 675 MSSCKLPLSLSIKIDRPKIPVGKPAVIFLDLPNNSPVMLRKFVKQATSKNPTKLSLNPQS 496
           M S K P+S + KI   + P   P        N+S VM +   K+ +SK  T L+  P S
Sbjct: 1   MYSSKTPISTTFKIGGSRNPNHNPR----SSSNSSTVMWKSIAKRISSK--TLLNRCPNS 54

Query: 495 FSRTCSFLGFSQDSTFPEKFKFR-PLFELNSSSNVCYPELGLRKIGDFFTRDEVMGRPIL 319
                 FL F+QDS FP+KFK R PLF+ + S +  Y            T DE M    +
Sbjct: 55  RR----FLAFAQDSVFPDKFKLRKPLFDNSRSDSNIYTS----------THDEFM----M 96

Query: 318 SGVRSQVNTYGLCPKSYASVAEAVEV--SPTDVEEDFN------NVNVS--VADEVQELL 169
              R+Q+N  GL  KSYA+VAEAVEV  S TD E+D N      N+N S  V DE QELL
Sbjct: 97  FSSRNQMNVTGLSFKSYATVAEAVEVAGSHTDFEDDNNSNSNNNNINNSNNVDDEFQELL 156

Query: 168 TEVKKEERRQYSTRWRQQRMV-RGMGKQKYQVLRRRQARIETEAWEQAAKEYKELL 4
            EV+KEE+RQ    WRQ R   +GMG +K++ LRRRQ +IETEAWEQAAKEY+ELL
Sbjct: 157 NEVRKEEKRQ----WRQNRRSGKGMGNEKFKALRRRQVKIETEAWEQAAKEYRELL 208


>ref|XP_006384251.1| hypothetical protein POPTR_0004s11060g [Populus trichocarpa]
           gi|550340797|gb|ERP62048.1| hypothetical protein
           POPTR_0004s11060g [Populus trichocarpa]
          Length = 475

 Score =  146 bits (369), Expect = 1e-32
 Identities = 104/230 (45%), Positives = 134/230 (58%), Gaps = 6/230 (2%)
 Frame = -1

Query: 675 MSSCKLPLSLSIKIDRPKIPVGKPAVIFLDLPNNSPVMLRKFVKQATSKNPTKLSLNPQS 496
           MSS    +  + KID       KP+++ L     S VM R   KQA  K P   SLN  S
Sbjct: 1   MSSANPHIFSTKKIDPLIAFDKKPSILSLINSKPSTVMWRNVAKQAILK-PQSKSLNFPS 59

Query: 495 FSRTCSFLGFSQDSTFPEKFKFRPLFELNSSSNVCYPELGLRKIGDFFTRDEVMGRPILS 316
           F RT SFLG  Q+  F EK KF     +N+SS    P+L  R+IG+  T ++ MG+P   
Sbjct: 60  FPRTHSFLGAPQEPIFFEKSKFH---SVNNSS----PQLCFRRIGEISTHEDYMGKPSFG 112

Query: 315 GVRSQVNTYG-----LCPKSYASVAEAVEVSPTDVEEDFNNVNVSVADEVQELLTEVKKE 151
            +R+  ++ G     LCP+ Y SVAEAV  S TDVE+     NV V +E+QELL + +KE
Sbjct: 113 FLRNGDSSNGNLCSGLCPRGYVSVAEAV--SSTDVED-----NVVVDEELQELLQDTRKE 165

Query: 150 ERRQYSTRWRQQRMV-RGMGKQKYQVLRRRQARIETEAWEQAAKEYKELL 4
           E ++   R R++    RGMG  KY+ LRRRQ +IE EAWEQAAKEYKELL
Sbjct: 166 EEKEKDFRRRRRLHANRGMGSGKYKALRRRQVKIEAEAWEQAAKEYKELL 215