BLASTX nr result
ID: Forsythia21_contig00033196
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Forsythia21_contig00033196
(994 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
tpd|FAA00012.1| TPA: hypothetical protein [Rice tungro bacillifo... 144 7e-32
tpd|FAA00009.1| TPA: hypothetical protein [Rice tungro bacillifo... 144 1e-31
tpd|FAA00006.1| TPA: hypothetical protein [Rice tungro bacillifo... 139 4e-30
ref|XP_002320456.2| hypothetical protein POPTR_0014s14950g, part... 120 1e-24
gb|AAK98721.1|AC090483_11 Putative retroelement, partial [Oryza ... 119 3e-24
gb|ABA98940.1| Zinc knuckle family protein [Oryza sativa Japonic... 115 6e-23
gb|AGC25937.1| hypothetical protein, partial [Piper DNA virus 1] 110 2e-21
emb|CAE04588.2| OSJNBb0006N15.5 [Oryza sativa Japonica Group] 108 6e-21
ref|YP_004581512.1| polyprotein [Sweet potato badnavirus A] gi|2... 76 3e-11
ref|YP_002916056.1| polyprotein [Sweet potato badnavirus B] gi|2... 74 2e-10
gb|AAX96231.1| hypothetical protein LOC_Os11g17280 [Oryza sativa... 72 5e-10
gb|AAC79860.1| P194 [Rice tungro bacilliform virus] 70 2e-09
dbj|BAA01607.1| 194K polypeptide [Rice tungro bacilliform virus]... 69 4e-09
gb|AAB03094.1| ORF3 [Rice tungro bacilliform virus] 69 4e-09
ref|NP_056762.1| hypothetical protein [Rice tungro bacilliform v... 69 4e-09
gb|AAC79863.1| P194 [Rice tungro bacilliform virus] 69 5e-09
gb|AAD30198.1|AF113832_3 polyprotein P194 [Rice tungro bacillifo... 69 7e-09
gb|AAC27711.1| polyprotein [Rice tungro bacilliform virus] 69 7e-09
gb|AAL55651.1|AF220561_3 P194 [Rice tungro bacilliform virus] 69 7e-09
gb|AAD30194.1|AF113831_3 polyprotein P194 [Rice tungro bacillifo... 68 9e-09
>tpd|FAA00012.1| TPA: hypothetical protein [Rice tungro bacilliform virus]
Length = 1718
Score = 144 bits (364), Expect = 7e-32
Identities = 92/292 (31%), Positives = 153/292 (52%), Gaps = 15/292 (5%)
Frame = -1
Query: 994 LLQKLFHKLSGPLGLEITESWNNFVYVKEFPD*KWSIGHRIQHVIRCIEDKCVTLQIQKQ 815
++++ F+KL PLG I E Y KE + +I I V + + C +Q Q+
Sbjct: 679 IVERYFNKLPDPLGSMIFEE-----YKKETEGAEINISQAITFVFKQLRKICTGIQAQRS 733
Query: 814 LKKTDYKFCKDIFTLQ-TYRVSKPIKKR-YKNDKRSKRR-PIKKRYFLRNSNKRKPYLDE 644
+K +DY FC I + +Y KP KR YK+ R+ KKRYFLR S+ R P+L +
Sbjct: 734 MKHSDYNFCNKIVQIPLSYGEDKPRSKRIYKHQNRNHNNIRTKKRYFLRRSDNRAPFLHK 793
Query: 643 NKHVRKFKPNRTYKNKHSCFVCNSNEHLARTCP----KRINS-YDNKS--TLVECTNKDL 485
++VR++ P +TY CF+CNS +HL+RTCP KR +S Y+ + +++ N+++
Sbjct: 794 -RNVRRYNPKKTYDKTCRCFICNSPDHLSRTCPNKDQKRYSSKYEEQERVLIIDSVNENI 852
Query: 484 IQLDEYISDNESIYSI-----VSIXXXXXXXXXXXXEILEEFSNLKIXXXXXXXXELDLV 320
+ D+ I D+ESIYSI V ++++E + LK+ +++
Sbjct: 853 LVCDDEIKDDESIYSIIETDEVETINEEYESSDEELDLIDELAGLKV----------EMM 902
Query: 319 QTIIQECEHNWQKRKGTDSTVCFLCNWHLAGKLRAKCIECYKEACIKCLEIN 164
+ CEH+W + KG + C C ++ + + R C C K+AC +C++ N
Sbjct: 903 DQL--NCEHDWIRGKGDYNIKCAFCIYYPSQENRVTCSICLKQACAECIKAN 952
>tpd|FAA00009.1| TPA: hypothetical protein [Rice tungro bacilliform virus]
Length = 1718
Score = 144 bits (363), Expect = 1e-31
Identities = 91/292 (31%), Positives = 153/292 (52%), Gaps = 15/292 (5%)
Frame = -1
Query: 994 LLQKLFHKLSGPLGLEITESWNNFVYVKEFPD*KWSIGHRIQHVIRCIEDKCVTLQIQKQ 815
++++ F+KL PLG I E Y KE + +I I V + + C +Q Q+
Sbjct: 679 IVERYFNKLPDPLGSMIFEE-----YKKETEGAEINISQAITFVFKQLRKICTGIQAQRS 733
Query: 814 LKKTDYKFCKDIFTLQ-TYRVSKPIKKR-YKNDKRSKRR-PIKKRYFLRNSNKRKPYLDE 644
+K +DY FC I + +Y KP KR YK+ R+ KKRYFLR S+ R P+L +
Sbjct: 734 MKHSDYNFCNKIVQIPLSYGEDKPRSKRIYKHQNRNNNNIRTKKRYFLRRSDNRAPFLHK 793
Query: 643 NKHVRKFKPNRTYKNKHSCFVCNSNEHLARTCP----KRINS-YDNKS--TLVECTNKDL 485
++VR++ P + Y CF+CNS +HL+RTCP KR +S Y+ + +++ N+++
Sbjct: 794 -RNVRRYNPKKXYDKTCRCFICNSPDHLSRTCPNKDQKRYSSKYEEQERVLIIDSVNENI 852
Query: 484 IQLDEYISDNESIYSI-----VSIXXXXXXXXXXXXEILEEFSNLKIXXXXXXXXELDLV 320
+ D+ I D+ESIYSI V ++++E + LK+ +++
Sbjct: 853 LVCDDEIKDDESIYSIIETDEVETINEEYESSDEELDLIDELAGLKV----------EMM 902
Query: 319 QTIIQECEHNWQKRKGTDSTVCFLCNWHLAGKLRAKCIECYKEACIKCLEIN 164
+ CEH+W + KG + C C ++ + + R C C K+AC +C+++N
Sbjct: 903 DQL--NCEHDWIRGKGDYNIKCAFCIYYPSQENRVTCSICLKQACAECIKVN 952
>tpd|FAA00006.1| TPA: hypothetical protein [Rice tungro bacilliform virus]
Length = 1711
Score = 139 bits (349), Expect = 4e-30
Identities = 90/292 (30%), Positives = 146/292 (50%), Gaps = 15/292 (5%)
Frame = -1
Query: 994 LLQKLFHKLSGPLGLEITESWNNFVYVKEFPD*KWSIGHRIQHVIRCIEDKCVTLQIQKQ 815
++++ F+KL PLG I E Y KE + +I I V + + C +Q Q+
Sbjct: 672 IVERYFNKLPDPLGSMIFEE-----YKKETEGAEINISQAITFVFKQLRKICTGIQAQRS 726
Query: 814 LKKTDYKFCKDIFTLQ-TYRVSKPIKKRYKNDKRSKRRPIK--KRYFLRNSNKRKPYLDE 644
+K +DY FC I + +Y +P KR + IK KRYFLR S+ R P+L +
Sbjct: 727 MKHSDYNFCNKIIQIPLSYGEDRPRNKRNHRYQSRNXNNIKTKKRYFLRRSDNRAPFLHK 786
Query: 643 NKHVRKFKPNRTYKNKHSCFVCNSNEHLARTCP----KRINS-YDNKS--TLVECTNKDL 485
++VR++ P +TY CF+CNS +HL+RTCP KR +S Y+ + +++ N+++
Sbjct: 787 -RNVRRYNPKKTYDKTCRCFICNSPDHLSRTCPNKDQKRYSSKYEEQERVLIIDSVNENI 845
Query: 484 IQLDEYISDNESIYSIVSI-----XXXXXXXXXXXXEILEEFSNLKIXXXXXXXXELDLV 320
+ D+ I D+ESIYSI+ ++++E + LKI
Sbjct: 846 LVCDDEIKDDESIYSIIETDEIENTNEEYESTDEELDLIDELAGLKIEXMDQL------- 898
Query: 319 QTIIQECEHNWQKRKGTDSTVCFLCNWHLAGKLRAKCIECYKEACIKCLEIN 164
CEH+W + KG + C C ++ + R C C K+AC +C++ N
Sbjct: 899 -----NCEHDWIRGKGDYNIKCAFCIYYPSQDNRVTCSICLKQACAECIKAN 945
>ref|XP_002320456.2| hypothetical protein POPTR_0014s14950g, partial [Populus
trichocarpa] gi|550324232|gb|EEE98771.2| hypothetical
protein POPTR_0014s14950g, partial [Populus trichocarpa]
Length = 284
Score = 120 bits (301), Expect = 1e-24
Identities = 58/118 (49%), Positives = 76/118 (64%)
Frame = -1
Query: 826 IQKQLKKTDYKFCKDIFTLQTYRVSKPIKKRYKNDKRSKRRPIKKRYFLRNSNKRKPYLD 647
I +QLKK +Y FC++I+T Q Y KK YK + R KRY+LR S+ RK YL+
Sbjct: 169 ITQQLKKENYGFCRNIYTPQDYGAKPYRKKGYKKKTHNPR----KRYYLRKSSARKSYLN 224
Query: 646 ENKHVRKFKPNRTYKNKHSCFVCNSNEHLARTCPKRINSYDNKSTLVECTNKDLIQLD 473
KHVRK +P+RTY NK +VCNS H ++TCPKR N YD + LVEC +DL ++D
Sbjct: 225 PKKHVRKIRPSRTYPNKLKFYVCNSKGHFSKTCPKRKNQYDRNAILVECVQEDLAEID 282
>gb|AAK98721.1|AC090483_11 Putative retroelement, partial [Oryza sativa Japonica Group]
Length = 484
Score = 119 bits (298), Expect = 3e-24
Identities = 72/197 (36%), Positives = 113/197 (57%), Gaps = 10/197 (5%)
Frame = -1
Query: 994 LLQKLFHKLSGPLGLEITESWNNFVYVKEFPD*KWSIGHRIQHVIRCIEDKCVTLQIQKQ 815
++++ F+KL PLG I E Y KE + +I I V + + C +Q Q+
Sbjct: 269 IVERYFNKLPDPLGSMIFEE-----YKKETEGAEINISQAITFVFKQLRKICTGIQAQRS 323
Query: 814 LKKTDYKFCKDIFTLQ-TYRVSKPIKKR-YKNDKRSKRR-PIKKRYFLRNSNKRKPYLDE 644
+K +DY FC I + +Y KP KR YK+ R+ KKRYFLR S+ R P+L +
Sbjct: 324 MKHSDYNFCNKIVQIPLSYGEDKPRSKRIYKHQNRNNNNIRTKKRYFLRRSDNRAPFLHK 383
Query: 643 NKHVRKFKPNRTYKNKHSCFVCNSNEHLARTCP----KRINS-YDNKS--TLVECTNKDL 485
++VR++ P +TY CF+CNS +HL+RTCP KR +S Y+ + +++ N+++
Sbjct: 384 -RNVRRYNPKKTYDKTCRCFICNSPDHLSRTCPNKDQKRYSSKYEEQERVLIIDSVNENI 442
Query: 484 IQLDEYISDNESIYSIV 434
+ D+ I D+ESIYSI+
Sbjct: 443 LVCDDEIKDDESIYSII 459
>gb|ABA98940.1| Zinc knuckle family protein [Oryza sativa Japonica Group]
Length = 825
Score = 115 bits (287), Expect = 6e-23
Identities = 71/197 (36%), Positives = 112/197 (56%), Gaps = 10/197 (5%)
Frame = -1
Query: 994 LLQKLFHKLSGPLGLEITESWNNFVYVKEFPD*KWSIGHRIQHVIRCIEDKCVTLQIQKQ 815
++++ F+KL PLG I E Y KE + +I I V + + C +Q Q+
Sbjct: 569 IVERYFNKLPDPLGSMIFEE-----YKKETEGAEINISQAITFVFKQLRKICTGIQAQRS 623
Query: 814 LKKTDYKFCKDIFTLQ-TYRVSKPIKKR-YKNDKRSKRR-PIKKRYFLRNSNKRKPYLDE 644
+K +DY FC I + +Y KP KR YK+ R+ KKRYFLR S+ R P+L +
Sbjct: 624 MKHSDYNFCNKIVQIPLSYGEDKPRSKRIYKHQNRNNNNIRTKKRYFLRRSDNRAPFLHK 683
Query: 643 NKHVRKFKPNRTYKNKHSCFVCNSNEHLARTCP----KRINS-YDNKS--TLVECTNKDL 485
++VR++ P +TY F+CNS +HL+RTCP KR +S Y+ + +++ N+++
Sbjct: 684 -RNVRRYNPKKTYDKTCRYFICNSPDHLSRTCPNKDQKRYSSKYEEQERVLIIDSVNENI 742
Query: 484 IQLDEYISDNESIYSIV 434
+ D+ I D+ESIYSI+
Sbjct: 743 LVCDDEIKDDESIYSII 759
>gb|AGC25937.1| hypothetical protein, partial [Piper DNA virus 1]
Length = 2027
Score = 110 bits (275), Expect = 2e-21
Identities = 81/277 (29%), Positives = 131/277 (47%), Gaps = 2/277 (0%)
Frame = -1
Query: 994 LLQKLFHKLSGPLGLEITESWNNFVYVKEFPD*KW-SIGHRIQHVIRCIEDKCVTLQIQK 818
L K F KL G LG +I + W V+ + D IG R+Q + ++C + +Q+
Sbjct: 378 LCDKYFVKLPGDLGRQIHDKW-----VESYKDSPGLGIGPRVQFTFLYLTERCKEIVLQE 432
Query: 817 QLKKTDYKFCKD-IFTLQTYRVSKPIKKRYKNDKRSKRRPIKKRYFLRNSNKRKPYLDEN 641
Q+K+ Y FC++ I+ Q Y K + KR+ K F R K++ Y N
Sbjct: 433 QIKRHSYNFCRNAIYGPQQYGNRKSFTR--------KRKLRKSTTFTR---KKQGY--NN 479
Query: 640 KHVRKFKPNRTYKNKHSCFVCNSNEHLARTCPKRINSYDNKSTLVECTNKDLIQLDEYIS 461
K+V+K K CF+C HLA CPKR NS ++ L+E +++++ +D S
Sbjct: 480 KYVKKASTK-----KCQCFICGDENHLANACPKR-NSNKERAALIENLDEEVVSID---S 530
Query: 460 DNESIYSIVSIXXXXXXXXXXXXEILEEFSNLKIXXXXXXXXELDLVQTIIQECEHNWQK 281
++ S+YSI+S E FS + L+ +++C HNW++
Sbjct: 531 EDNSVYSIISESDYYEPG--------EPFS-----------IQYGLINEQMKDCIHNWEQ 571
Query: 280 RKGTDSTVCFLCNWHLAGKLRAKCIECYKEACIKCLE 170
KG+DST C C + + R +C C +E C C++
Sbjct: 572 GKGSDSTPCSNCTLYPELRRRYRCANCMQEICFICIK 608
>emb|CAE04588.2| OSJNBb0006N15.5 [Oryza sativa Japonica Group]
Length = 683
Score = 108 bits (270), Expect = 6e-21
Identities = 77/255 (30%), Positives = 128/255 (50%), Gaps = 15/255 (5%)
Frame = -1
Query: 994 LLQKLFHKLSGPLGLEITESWNNFVYVKEFPD*KWSIGHRIQHVIRCIEDKCVTLQIQKQ 815
++++ F+KL PLG I E Y KE + +I I V + + C +Q Q+
Sbjct: 447 IVERYFNKLPDPLGSMIFEE-----YKKETEGAEINISQAITFVFKQLRKICTGIQAQRS 501
Query: 814 LKKTDYKFC-KDIFTLQTYRVSKPIKKRYKNDKRSKRRPIK--KRYFLRNSNKRKPYLDE 644
+K +DY FC K I +Y +P KR +R IK RYFLR S+ P+L +
Sbjct: 502 MKHSDYNFCNKKIQIPLSYGEERPRNKRNHRYQRRNNNNIKTKNRYFLRRSDNIAPFLHK 561
Query: 643 NKHVRKFKPNRTYKNKHSCFVCNSNEHLARTC----PKRINS-YDNKS--TLVECTNKDL 485
++VR++ P +TY CF+CNS +HL+RTC KR +S Y+ + +++ N+++
Sbjct: 562 -RNVRRYNPKKTYDKTCRCFICNSPDHLSRTCANKDQKRYSSKYEEQERVLIIDSVNENI 620
Query: 484 IQLDEYISDNESIYSIVSI-----XXXXXXXXXXXXEILEEFSNLKIXXXXXXXXELDLV 320
+ D+ I D+ESIYSI+ ++++E + LKI +++
Sbjct: 621 LVCDDEIKDDESIYSIIETDEIENTNEEYESTDEELDLIDELAGLKI----------EMM 670
Query: 319 QTIIQECEHNWQKRK 275
+ CEH+W + K
Sbjct: 671 DQL--NCEHDWIRGK 683
>ref|YP_004581512.1| polyprotein [Sweet potato badnavirus A] gi|224566902|gb|ACN56745.1|
polyprotein [Sweet potato badnavirus A]
Length = 1189
Score = 76.3 bits (186), Expect = 3e-11
Identities = 73/280 (26%), Positives = 111/280 (39%), Gaps = 7/280 (2%)
Frame = -1
Query: 994 LLQKLFHKLSGPLGLEITESWNNFVYVKEFPD*KWSIGHRIQHVIRCIEDKCVTLQIQKQ 815
L +KL+ K+ G LG +I E +N K P + ++ RI + +ED+C +
Sbjct: 787 LSEKLWIKMPGDLGTKIKEEFN-----KAHPGAQIAVIPRIFFAHKYLEDRCKEAAFARS 841
Query: 814 LKKTDYKFCKDIFTLQTYRVSKPIKKRYKNDKRSKRRPIKKRYFLRNSNKRKPYLDENKH 635
LK FCKDI PI+ Y NDK K P K R + K KP+ H
Sbjct: 842 LKSVS--FCKDI----------PIQGYYGNDK-PKYTPRKARTY-----KGKPH---ETH 880
Query: 634 VRKFKPNRTYKNKH-SCFVCNSNEHLARTCP---KRINSYDNKSTLVECTNKDLIQLDEY 467
VR + +N H CF+C H AR CP + IN + + N D++ + E
Sbjct: 881 VRIDRRKNLDRNSHCKCFICEQPGHYARDCPNQKRNINRVMMFNQVNIPDNYDIVSVSEN 940
Query: 466 ISDNESIYSIVSIXXXXXXXXXXXXEILEEFSNLKIXXXXXXXXELDLVQTIIQECEHNW 287
D+++IYS+ E + ++ I + + C H W
Sbjct: 941 AEDSDAIYSLTEGDDAEETNFGLVHESVHMITHQVIGSWRAYIEPSETQKV----CRHQW 996
Query: 286 QKRKGTD---STVCFLCNWHLAGKLRAKCIECYKEACIKC 176
Q + + C C H+ + R+ C C C C
Sbjct: 997 QDHQEIELPGEDTCLWCKHHINIRTRSHCPACLLTVCNIC 1036
>ref|YP_002916056.1| polyprotein [Sweet potato badnavirus B] gi|237846579|gb|ACN56750.1|
polyprotein [Sweet potato badnavirus B]
Length = 1170
Score = 73.6 bits (179), Expect = 2e-10
Identities = 71/283 (25%), Positives = 117/283 (41%), Gaps = 10/283 (3%)
Frame = -1
Query: 994 LLQKLFHKLSGPLGLEITESWNNFVYVKEFPD*KWSIGHRIQHVIRCIEDKCVTLQIQKQ 815
L KL+ K+ G LG +I E ++ K+ P + ++ RI + +ED+C +
Sbjct: 774 LSDKLWIKMPGDLGTKIKEEFD-----KKHPGAEIAVIPRIFFAHKYLEDRCKEAAFTRS 828
Query: 814 LKKTDYKFCKDIFTLQTYRVSKPIKKRYKNDKRSKRRPIKKRYFLRNSNKRKPYLDENKH 635
LK FCKDI PI+ Y +DK K P K + + K KP+ H
Sbjct: 829 LKSVS--FCKDI----------PIQGYYGSDK-PKYTPRKAKTY-----KGKPH---ETH 867
Query: 634 VRKFKPNRTYKNKH-SCFVCNSNEHLARTCP------KRINSYDNKSTLVECTNKDLIQL 476
VR + +N H CF+C H AR CP KR+ + N+ + + N D++ +
Sbjct: 868 VRIDRRKNLDRNSHCKCFICEEPGHYARDCPNQKRNIKRVMMF-NQVNIPD--NYDIVSV 924
Query: 475 DEYISDNESIYSIVSIXXXXXXXXXXXXEILEEFSNLKIXXXXXXXXELDLVQTIIQECE 296
E D+++IYS+ + E + +D+ + + + C
Sbjct: 925 QENEEDSDAIYSLTE---GEEGDEIAFGIVQESVHMISHQVIGSWRAHIDMSE-VQKVCR 980
Query: 295 HNWQKRKGTDS---TVCFLCNWHLAGKLRAKCIECYKEACIKC 176
H WQ + ++ C C H+ + R+ C C C C
Sbjct: 981 HQWQDHQEIEAPGEDTCLWCKHHINIRTRSHCPACLLTTCNIC 1023
>gb|AAX96231.1| hypothetical protein LOC_Os11g17280 [Oryza sativa Japonica Group]
gi|77549890|gb|ABA92687.1| hypothetical protein
LOC_Os11g17280 [Oryza sativa Japonica Group]
Length = 1505
Score = 72.4 bits (176), Expect = 5e-10
Identities = 63/282 (22%), Positives = 112/282 (39%), Gaps = 5/282 (1%)
Frame = -1
Query: 994 LLQKLFHKLSGPLGLEITESWNNFVYVKEFPD*KWSIGHRIQHVIRCIEDKCVTLQIQKQ 815
++++ F+KL PLG I E Y KE + +I I V + + C +Q Q+
Sbjct: 474 IVERYFNKLPDPLGSMIFEE-----YKKETEGAEINISQAITFVFKQLRKICTGIQAQRS 528
Query: 814 LKKTDYKFCKDIFTLQTYRVSKPIKKRYKNDKRSKRRPIKKRYFLRNSNKRKPYLDENKH 635
+K +DY FC I V P+ Y DK H
Sbjct: 529 MKHSDYNFCNKI-------VQIPLS--YGEDK------------------------PRNH 555
Query: 634 VRKFKPNRTYKNKHSCFVCNSNEHLARTCPKRINSYDNKSTLVECTNKDLIQLDEYISDN 455
+ + PN+ K S + + +++ N++++ D+ I D+
Sbjct: 556 LSRTCPNKDQKRYSSKY-----------------EEQERVLIIDSVNENILVCDDEIKDD 598
Query: 454 ESIYSI-----VSIXXXXXXXXXXXXEILEEFSNLKIXXXXXXXXELDLVQTIIQECEHN 290
ESIYSI V ++++E + LK+ +++ + CEH+
Sbjct: 599 ESIYSIIETDEVETINEEYESSDEELDLIDELAGLKV----------EMMDQL--NCEHD 646
Query: 289 WQKRKGTDSTVCFLCNWHLAGKLRAKCIECYKEACIKCLEIN 164
W + KG + C C ++ + + R C C K+AC +C++ N
Sbjct: 647 WIRGKGDYNIKCAFCIYYPSQENRVTCSICLKQACAECIKAN 688
>gb|AAC79860.1| P194 [Rice tungro bacilliform virus]
Length = 678
Score = 70.1 bits (170), Expect = 2e-09
Identities = 64/272 (23%), Positives = 108/272 (39%)
Frame = -1
Query: 991 LQKLFHKLSGPLGLEITESWNNFVYVKEFPD*KWSIGHRIQHVIRCIEDKCVTLQIQKQL 812
+++LF +L +G + +VK+ + IG + ++ + KC+ K
Sbjct: 282 VERLFDRLPEAVGKVVKAD-----FVKDGNSYEAGIGIAVSYISTWMRAKCIKETEAKTQ 336
Query: 811 KKTDYKFCKDIFTLQTYRVSKPIKKRYKNDKRSKRRPIKKRYFLRNSNKRKPYLDENKHV 632
KK FC+ I+T+ Y K+R I KR N NKRK Y V
Sbjct: 337 KKASLAFCRSIYTIGDY----------------KKRKILKRVTNYNKNKRKNY------V 374
Query: 631 RKFKPNRTYKNKHSCFVCNSNEHLARTCPKRINSYDNKSTLVECTNKDLIQLDEYISDNE 452
R+ + K K C++C HLA CP+R + +++L++ ++D++ + SD+E
Sbjct: 375 RR----PSIKKKCRCYICQDENHLANRCPRRYTN-QARASLIDGLDEDIVSI---ASDDE 426
Query: 451 SIYSIVSIXXXXXXXXXXXXEILEEFSNLKIXXXXXXXXELDLVQTIIQECEHNWQKRKG 272
I + + I L+EF + QE EH W+ G
Sbjct: 427 DIENFLEIIE------------LDEF-----------------IAHSSQEHEHTWE-IGG 456
Query: 271 TDSTVCFLCNWHLAGKLRAKCIECYKEACIKC 176
VC +C++ C C + C C
Sbjct: 457 KKDKVCEICSYFTDYNKTVSCKTCETQYCKTC 488
>dbj|BAA01607.1| 194K polypeptide [Rice tungro bacilliform virus]
gi|229052|prf||1817177A capsid protein
Length = 1675
Score = 69.3 bits (168), Expect = 4e-09
Identities = 73/334 (21%), Positives = 127/334 (38%), Gaps = 5/334 (1%)
Frame = -1
Query: 991 LQKLFHKLSGPLGLEITESWNNFVYVKEFPD*KWSIGHRIQHVIRCIEDKCVTLQIQKQL 812
+++LF +L +G + +VK+ + IG + ++ + KC+ K
Sbjct: 671 VERLFDRLPEAVGKVVKAD-----FVKDGNSYEAGIGIAVSYISTWMRAKCIKETEAKTQ 725
Query: 811 KKTDYKFCKDIFTLQTYRVSKPIKKRYKNDKRSKRRPIKKRYFLRNSNKRKPYLDENKHV 632
KK FC+ I+T+ Y K+R I KR N N+RK Y V
Sbjct: 726 KKASLAFCRSIYTIGDY----------------KKRKILKRVTNYNKNRRKNY------V 763
Query: 631 RKFKPNRTYKNKHSCFVCNSNEHLARTCPKRINSYDNKSTLVECTNKDLIQLDEYISDNE 452
R+ + K K C++C HLA CP+R + +++L++ ++D++ + SD+E
Sbjct: 764 RR----PSIKKKCRCYICQDENHLANRCPRRYTN-QARASLIDGLDEDIVSI---ASDDE 815
Query: 451 SIYSIVSIXXXXXXXXXXXXEILEEFSNLKIXXXXXXXXELDLVQTIIQECEHNWQKRKG 272
I + + I L+EF + QE EH W+ G
Sbjct: 816 DIENFLEIIE------------LDEF-----------------IAHSSQEHEHTWE-IGG 845
Query: 271 TDSTVCFLCNWHLAGKLRAKCIECYKEACIKC-----LEINGLIKEDEVKTXXXXXXXXX 107
VC +C++ C C + C C LE+ + K + +T
Sbjct: 846 KKDKVCEICSYFTDYNKTVSCKTCETQYCKTCSDQLALEVTEVKKPTKEETMISDLKLNV 905
Query: 106 XXXXXXXXXXXXXEDMQKLLIQRIEILEFNNKGK 5
+MQ L + E ++ NK +
Sbjct: 906 KNLEFRVTILEHKVEMQNLQ-DKFETMQIRNKSE 938
>gb|AAB03094.1| ORF3 [Rice tungro bacilliform virus]
Length = 1675
Score = 69.3 bits (168), Expect = 4e-09
Identities = 73/334 (21%), Positives = 127/334 (38%), Gaps = 5/334 (1%)
Frame = -1
Query: 991 LQKLFHKLSGPLGLEITESWNNFVYVKEFPD*KWSIGHRIQHVIRCIEDKCVTLQIQKQL 812
+++LF +L +G + +VK+ + IG + ++ + KC+ K
Sbjct: 671 VERLFDRLPEAVGKVVKAD-----FVKDGNSYEAGIGIAVSYISTWMRAKCIKETEAKTQ 725
Query: 811 KKTDYKFCKDIFTLQTYRVSKPIKKRYKNDKRSKRRPIKKRYFLRNSNKRKPYLDENKHV 632
KK FC+ I+T+ Y K+R I KR N N+RK Y V
Sbjct: 726 KKASLAFCRSIYTIGDY----------------KKRKILKRVTNYNKNRRKNY------V 763
Query: 631 RKFKPNRTYKNKHSCFVCNSNEHLARTCPKRINSYDNKSTLVECTNKDLIQLDEYISDNE 452
R+ + K K C++C HLA CP+R + +++L++ ++D++ + SD+E
Sbjct: 764 RR----PSIKKKCRCYICQDENHLANRCPRRYTN-QARASLIDGLDEDIVSI---ASDDE 815
Query: 451 SIYSIVSIXXXXXXXXXXXXEILEEFSNLKIXXXXXXXXELDLVQTIIQECEHNWQKRKG 272
I + + I L+EF + QE EH W+ G
Sbjct: 816 DIENFLEIIE------------LDEF-----------------IAHSSQEHEHTWE-IGG 845
Query: 271 TDSTVCFLCNWHLAGKLRAKCIECYKEACIKC-----LEINGLIKEDEVKTXXXXXXXXX 107
VC +C++ C C + C C LE+ + K + +T
Sbjct: 846 KKDKVCEICSYFTDYNKTVSCKTCETQYCKTCSDQLALEVTEVKKPTKEETMIDDLKLNV 905
Query: 106 XXXXXXXXXXXXXEDMQKLLIQRIEILEFNNKGK 5
+MQ L + E ++ NK +
Sbjct: 906 KNLEFRVTILEHKVEMQNLQ-DKFETMQIRNKSE 938
>ref|NP_056762.1| hypothetical protein [Rice tungro bacilliform virus]
gi|130653|sp|P27502.1|POL_RTBVP RecName: Full=Polyprotein
P3; AltName: Full=P194 protein; Contains: RecName:
Full=Putative movement protein; Short=MP; Contains:
RecName: Full=Capsid protein; AltName: Full=Coat protein;
Short=CP; Contains: RecName: Full=Protease; Short=PR;
Contains: RecName: Full=Reverse
transcriptase/Ribonuclease H; Short=RT; AltName:
Full=p55; Flags: Precursor [Rice tungro bacilliform virus
(isolate Philippines)] gi|61913|emb|CAA40997.1| ORF P194
[Rice tungro bacilliform virus]
Length = 1675
Score = 69.3 bits (168), Expect = 4e-09
Identities = 73/334 (21%), Positives = 127/334 (38%), Gaps = 5/334 (1%)
Frame = -1
Query: 991 LQKLFHKLSGPLGLEITESWNNFVYVKEFPD*KWSIGHRIQHVIRCIEDKCVTLQIQKQL 812
+++LF +L +G + +VK+ + IG + ++ + KC+ K
Sbjct: 671 VERLFDRLPEAVGKVVKAD-----FVKDGNSYEAGIGIAVSYISTWMRAKCIKETEAKTQ 725
Query: 811 KKTDYKFCKDIFTLQTYRVSKPIKKRYKNDKRSKRRPIKKRYFLRNSNKRKPYLDENKHV 632
KK FC+ I+T+ Y K+R I KR N N+RK Y V
Sbjct: 726 KKASLAFCRSIYTIGDY----------------KKRKILKRVTNYNKNRRKNY------V 763
Query: 631 RKFKPNRTYKNKHSCFVCNSNEHLARTCPKRINSYDNKSTLVECTNKDLIQLDEYISDNE 452
R+ + K K C++C HLA CP+R + +++L++ ++D++ + SD+E
Sbjct: 764 RR----PSIKKKCRCYICQDENHLANRCPRRYTN-QARASLIDGLDEDIVSI---ASDDE 815
Query: 451 SIYSIVSIXXXXXXXXXXXXEILEEFSNLKIXXXXXXXXELDLVQTIIQECEHNWQKRKG 272
I + + I L+EF + QE EH W+ G
Sbjct: 816 DIENFLEIIE------------LDEF-----------------IAHSSQEHEHTWE-IGG 845
Query: 271 TDSTVCFLCNWHLAGKLRAKCIECYKEACIKC-----LEINGLIKEDEVKTXXXXXXXXX 107
VC +C++ C C + C C LE+ + K + +T
Sbjct: 846 KKDKVCEICSYFTDYNKTVSCKTCETQYCKTCSDQLALEVTEVKKPTKEETMIDDLKLNV 905
Query: 106 XXXXXXXXXXXXXEDMQKLLIQRIEILEFNNKGK 5
+MQ L + E ++ NK +
Sbjct: 906 KNLEFRVTILEHKVEMQNLQ-DKFETMQIRNKSE 938
>gb|AAC79863.1| P194 [Rice tungro bacilliform virus]
Length = 678
Score = 68.9 bits (167), Expect = 5e-09
Identities = 63/272 (23%), Positives = 107/272 (39%)
Frame = -1
Query: 991 LQKLFHKLSGPLGLEITESWNNFVYVKEFPD*KWSIGHRIQHVIRCIEDKCVTLQIQKQL 812
+++LF +L +G + +VK+ + IG + ++ + KC+ K
Sbjct: 282 VERLFDRLPEAVGKVVKAD-----FVKDGNSYEAGIGIAVSYISTWMRAKCIKETEAKTQ 336
Query: 811 KKTDYKFCKDIFTLQTYRVSKPIKKRYKNDKRSKRRPIKKRYFLRNSNKRKPYLDENKHV 632
KK FC+ I+T+ Y K+R I KR N N+RK Y V
Sbjct: 337 KKASLAFCRSIYTIGDY----------------KKRKILKRVTNYNKNRRKNY------V 374
Query: 631 RKFKPNRTYKNKHSCFVCNSNEHLARTCPKRINSYDNKSTLVECTNKDLIQLDEYISDNE 452
R+ + K K C++C HLA CP+R + +++L++ +D++ + SD+E
Sbjct: 375 RR----PSIKKKCRCYICQDENHLANRCPRRYTN-QARASLIDGLEEDIVSI---ASDDE 426
Query: 451 SIYSIVSIXXXXXXXXXXXXEILEEFSNLKIXXXXXXXXELDLVQTIIQECEHNWQKRKG 272
I + + I L+EF + QE EH W+ G
Sbjct: 427 DIENFLEIIE------------LDEF-----------------IAHSSQEHEHTWE-IGG 456
Query: 271 TDSTVCFLCNWHLAGKLRAKCIECYKEACIKC 176
VC +C++ C C + C C
Sbjct: 457 KKDKVCEICSYFTDYNKTVSCKTCETQYCKNC 488
>gb|AAD30198.1|AF113832_3 polyprotein P194 [Rice tungro bacilliform virus]
Length = 1677
Score = 68.6 bits (166), Expect = 7e-09
Identities = 63/274 (22%), Positives = 109/274 (39%)
Frame = -1
Query: 991 LQKLFHKLSGPLGLEITESWNNFVYVKEFPD*KWSIGHRIQHVIRCIEDKCVTLQIQKQL 812
+++LF +L +G + +VK+ + IG + ++ + KC+ K
Sbjct: 671 VERLFDRLPEAVGKVVKAD-----FVKDGNSYEAGIGIAVSYISTWMRAKCIKETEAKTQ 725
Query: 811 KKTDYKFCKDIFTLQTYRVSKPIKKRYKNDKRSKRRPIKKRYFLRNSNKRKPYLDENKHV 632
KK FC+ I+T+ Y K+R I KR N N+RK Y V
Sbjct: 726 KKASLAFCRSIYTIGDY----------------KKRKILKRVTNYNKNRRKNY------V 763
Query: 631 RKFKPNRTYKNKHSCFVCNSNEHLARTCPKRINSYDNKSTLVECTNKDLIQLDEYISDNE 452
R+ + K K C++C HLA CP+R + +++L++ ++D++ + SD+E
Sbjct: 764 RR----PSIKKKCRCYICQDENHLANRCPRRYTN-QARASLIDGLDEDIVSI---ASDDE 815
Query: 451 SIYSIVSIXXXXXXXXXXXXEILEEFSNLKIXXXXXXXXELDLVQTIIQECEHNWQKRKG 272
I + + I L+EF + QE EH W+ G
Sbjct: 816 DIENFLEIIE------------LDEF-----------------IAHSSQEHEHTWE-IGG 845
Query: 271 TDSTVCFLCNWHLAGKLRAKCIECYKEACIKCLE 170
VC +C++ C C + C C +
Sbjct: 846 KKDKVCEICSYFTDYNKTVSCKICETQYCKTCAD 879
>gb|AAC27711.1| polyprotein [Rice tungro bacilliform virus]
Length = 1675
Score = 68.6 bits (166), Expect = 7e-09
Identities = 63/272 (23%), Positives = 108/272 (39%)
Frame = -1
Query: 991 LQKLFHKLSGPLGLEITESWNNFVYVKEFPD*KWSIGHRIQHVIRCIEDKCVTLQIQKQL 812
+++LF +L +G + +VK+ + IG + ++ + KC+ K
Sbjct: 671 VERLFDRLPEAVGKVVKAD-----FVKDGNSYEAGIGIAVSYISTWMRAKCIKETEAKTQ 725
Query: 811 KKTDYKFCKDIFTLQTYRVSKPIKKRYKNDKRSKRRPIKKRYFLRNSNKRKPYLDENKHV 632
KK FC+ I+T+ Y K+R I KR N N+RK Y V
Sbjct: 726 KKASLAFCRSIYTIGDY----------------KKRKILKRVTNYNKNRRKNY------V 763
Query: 631 RKFKPNRTYKNKHSCFVCNSNEHLARTCPKRINSYDNKSTLVECTNKDLIQLDEYISDNE 452
R+ + K K C++C HLA CP+R + +++++E ++D++ + SD+E
Sbjct: 764 RR----PSIKKKCRCYICQDENHLANRCPRRYTN-QARASIIEGLDEDIVSI---ASDDE 815
Query: 451 SIYSIVSIXXXXXXXXXXXXEILEEFSNLKIXXXXXXXXELDLVQTIIQECEHNWQKRKG 272
I + + I L+EF + QE EH W+ G
Sbjct: 816 DIENFLEIIE------------LDEF-----------------IAHSSQEHEHTWE-IGG 845
Query: 271 TDSTVCFLCNWHLAGKLRAKCIECYKEACIKC 176
VC +C++ C C + C C
Sbjct: 846 KKDKVCEICSYFTDYNKTVSCKICETQYCKTC 877
>gb|AAL55651.1|AF220561_3 P194 [Rice tungro bacilliform virus]
Length = 1677
Score = 68.6 bits (166), Expect = 7e-09
Identities = 63/272 (23%), Positives = 108/272 (39%)
Frame = -1
Query: 991 LQKLFHKLSGPLGLEITESWNNFVYVKEFPD*KWSIGHRIQHVIRCIEDKCVTLQIQKQL 812
+++LF +L +G + +VK+ + IG + ++ + KC+ K
Sbjct: 674 VERLFDRLPEAVGKVVKAD-----FVKDGNSYEAGIGIAVSYISTWMRAKCIKETEAKTQ 728
Query: 811 KKTDYKFCKDIFTLQTYRVSKPIKKRYKNDKRSKRRPIKKRYFLRNSNKRKPYLDENKHV 632
KK FC+ I+T+ Y K+R I KR N N+RK Y V
Sbjct: 729 KKASLAFCRSIYTIGDY----------------KKRKILKRVTNYNKNRRKNY------V 766
Query: 631 RKFKPNRTYKNKHSCFVCNSNEHLARTCPKRINSYDNKSTLVECTNKDLIQLDEYISDNE 452
R+ + K K C++C HLA CP+R + +++L++ ++D++ + SD+E
Sbjct: 767 RR----PSIKKKCRCYICQDENHLANRCPRRYTN-QARASLIDGLDEDIVSI---ASDDE 818
Query: 451 SIYSIVSIXXXXXXXXXXXXEILEEFSNLKIXXXXXXXXELDLVQTIIQECEHNWQKRKG 272
I + + I L+EF + QE EH W+ G
Sbjct: 819 DIENFLEIIE------------LDEF-----------------IAHSSQEHEHTWEV-GG 848
Query: 271 TDSTVCFLCNWHLAGKLRAKCIECYKEACIKC 176
VC +C++ C C + C C
Sbjct: 849 KKDKVCEICSYFTDYNKTVSCKICETQYCKTC 880
>gb|AAD30194.1|AF113831_3 polyprotein P194 [Rice tungro bacilliform virus]
Length = 1675
Score = 68.2 bits (165), Expect = 9e-09
Identities = 72/334 (21%), Positives = 127/334 (38%), Gaps = 5/334 (1%)
Frame = -1
Query: 991 LQKLFHKLSGPLGLEITESWNNFVYVKEFPD*KWSIGHRIQHVIRCIEDKCVTLQIQKQL 812
+++LF +L +G + +VK+ + IG + ++ + KC+ K
Sbjct: 671 VERLFDRLPEAVGKVVKAD-----FVKDGNSYEAGIGIAVSYISTWMRAKCIKETEAKTQ 725
Query: 811 KKTDYKFCKDIFTLQTYRVSKPIKKRYKNDKRSKRRPIKKRYFLRNSNKRKPYLDENKHV 632
KK FC+ I+T+ Y K+R I K+ N N+RK Y V
Sbjct: 726 KKASLAFCRSIYTIGDY----------------KKRKILKKVTNYNKNRRKNY------V 763
Query: 631 RKFKPNRTYKNKHSCFVCNSNEHLARTCPKRINSYDNKSTLVECTNKDLIQLDEYISDNE 452
R+ + K K C++C HLA CP+R + +++L++ ++D++ + SD+E
Sbjct: 764 RR----PSIKKKCRCYICQDENHLANRCPRRYTN-QARASLIDGLDEDIVSI---ASDDE 815
Query: 451 SIYSIVSIXXXXXXXXXXXXEILEEFSNLKIXXXXXXXXELDLVQTIIQECEHNWQKRKG 272
I + + I L+EF + QE EH W+ G
Sbjct: 816 DIENFLEIIE------------LDEF-----------------IAHSSQEHEHTWE-IGG 845
Query: 271 TDSTVCFLCNWHLAGKLRAKCIECYKEACIKC-----LEINGLIKEDEVKTXXXXXXXXX 107
VC +C++ C C + C C LE+ + K + +T
Sbjct: 846 KKDKVCEICSYFTDYNKTVSCKTCETQYCKTCSDQLALEVTEVKKPTKEETMIDDLKLNV 905
Query: 106 XXXXXXXXXXXXXEDMQKLLIQRIEILEFNNKGK 5
+MQ L + E ++ NK +
Sbjct: 906 KNLEFRVTILEHKVEMQNLQ-DKFETMQIRNKSE 938