BLASTX nr result

ID: Forsythia21_contig00031986 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Forsythia21_contig00031986
         (362 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011079618.1| PREDICTED: probable ATP-dependent RNA helica...    74   5e-11
ref|XP_009775111.1| PREDICTED: probable ATP-dependent RNA helica...    64   3e-08
ref|XP_006339691.1| PREDICTED: probable ATP-dependent RNA helica...    63   7e-08
ref|XP_002302733.2| hypothetical protein POPTR_0002s20250g [Popu...    61   3e-07
ref|XP_004231211.1| PREDICTED: probable ATP-dependent RNA helica...    59   1e-06
ref|XP_011007809.1| PREDICTED: probable ATP-dependent RNA helica...    57   5e-06
ref|XP_004294749.1| PREDICTED: putative ATP-dependent RNA helica...    57   6e-06

>ref|XP_011079618.1| PREDICTED: probable ATP-dependent RNA helicase DHX37 [Sesamum
           indicum]
          Length = 1330

 Score = 73.6 bits (179), Expect = 5e-11
 Identities = 43/120 (35%), Positives = 63/120 (52%)
 Frame = -3

Query: 360 LSERELQNHISASFQSSHELVWRNEPATLGEDAALTGEEVTSETSKLLIPEQPENSKRAF 181
           L+ER + N  S S  S    V  + P T   +  L+  EV  + ++   PE    S ++F
Sbjct: 163 LAERVILNDTSISTGSCENEVCGDGPMTSNGEGVLSSREVAGDANQPSKPEPLPKSTQSF 222

Query: 180 LPSEEQAESLATVTGSTNVNLSNIMNQGNCTPTRNTTAPTVVHVSRPKEVEITRRDLPIV 1
               +  +S+ T+ G    N ++  N+ N +  RN TAPTVVHVSRP++VE  R  LPIV
Sbjct: 223 PQDADMIKSMDTIAGGLKYNRNHENNRDNLSSARNNTAPTVVHVSRPEDVEKQRMGLPIV 282


>ref|XP_009775111.1| PREDICTED: probable ATP-dependent RNA helicase DHX37 [Nicotiana
           sylvestris]
          Length = 1355

 Score = 64.3 bits (155), Expect = 3e-08
 Identities = 43/121 (35%), Positives = 61/121 (50%), Gaps = 1/121 (0%)
 Frame = -3

Query: 360 LSERELQNHISASFQSSHELVWRNEPATLGEDAALTGEEVTSETSKLLIPE-QPENSKRA 184
           L + E+Q+    +  S  EL  ++     G DA++  ++    T++ L  + Q ++    
Sbjct: 162 LGKGEVQSEALVTPGSPEELTSQSGLLVCGGDASVQNKQEEDRTTECLKSDYQQDHPSIC 221

Query: 183 FLPSEEQAESLATVTGSTNVNLSNIMNQGNCTPTRNTTAPTVVHVSRPKEVEITRRDLPI 4
              +EEQ +S+       N  LSN  N  N  P R  T PTVVHV RPKEVE  R DLPI
Sbjct: 222 DCHNEEQRKSMDGTKDIQNAILSNSSNSANSLPQRALTTPTVVHVLRPKEVENKRSDLPI 281

Query: 3   V 1
           V
Sbjct: 282 V 282


>ref|XP_006339691.1| PREDICTED: probable ATP-dependent RNA helicase DHX37-like [Solanum
           tuberosum]
          Length = 1336

 Score = 63.2 bits (152), Expect = 7e-08
 Identities = 40/110 (36%), Positives = 54/110 (49%), Gaps = 5/110 (4%)
 Frame = -3

Query: 315 SSHELVWRNEPATLGEDAALTGEEVTSETSKLLIPEQPENSKRAFLP-----SEEQAESL 151
           S  EL   +E      D ++  ++    T++ L  +  +N     LP     +EE+ +S 
Sbjct: 179 SPQELACHSELLVCDRDTSVPSKQEEDRTAECLNSDYQQNH----LPIHDCHNEERRKST 234

Query: 150 ATVTGSTNVNLSNIMNQGNCTPTRNTTAPTVVHVSRPKEVEITRRDLPIV 1
                  N  LSN  N  NC P R+ T P VVHVSRPKEVE  R +LPIV
Sbjct: 235 DVAKAVQNAILSNSTNSANCLPERDLTTPVVVHVSRPKEVENNRSNLPIV 284


>ref|XP_002302733.2| hypothetical protein POPTR_0002s20250g [Populus trichocarpa]
           gi|550345446|gb|EEE82006.2| hypothetical protein
           POPTR_0002s20250g [Populus trichocarpa]
          Length = 1198

 Score = 61.2 bits (147), Expect = 3e-07
 Identities = 47/122 (38%), Positives = 63/122 (51%), Gaps = 5/122 (4%)
 Frame = -3

Query: 351 RELQNHISASFQSSHELVWRNEPATLGED-AALTGEEVTSETSKLLIPEQPENSKRAFLP 175
           RE+QNH S S    H+ V  NE    G   +A + EEV +E +     E P+ S +A   
Sbjct: 123 REVQNHASFSLVY-HDPVSGNELGLNGRSVSAFSAEEVPNEDNCTPTLEVPKKSSQA--S 179

Query: 174 SEEQAESLATVTGSTN----VNLSNIMNQGNCTPTRNTTAPTVVHVSRPKEVEITRRDLP 7
           S+  A   +++ G  N    V+L    N  +    R  T PTVVHVSRP EVE  R+DLP
Sbjct: 180 SDHDARKTSSLMGKLNESSTVDLGKASNFPDFPLPRPPTTPTVVHVSRPDEVEKKRKDLP 239

Query: 6   IV 1
           I+
Sbjct: 240 II 241


>ref|XP_004231211.1| PREDICTED: probable ATP-dependent RNA helicase DHX37 [Solanum
           lycopersicum] gi|723661502|ref|XP_010326955.1|
           PREDICTED: probable ATP-dependent RNA helicase DHX37
           [Solanum lycopersicum]
          Length = 1341

 Score = 58.9 bits (141), Expect = 1e-06
 Identities = 37/106 (34%), Positives = 53/106 (50%), Gaps = 1/106 (0%)
 Frame = -3

Query: 315 SSHELVWRNEPATLGEDAALTGEEVTSETSKLLIPEQPENSKRAF-LPSEEQAESLATVT 139
           SS EL   ++      DA++  ++    T++ L  +  +N        +E + +S     
Sbjct: 179 SSQELACHSKLLVCDRDASVPSKQKEDRTAECLKSDYLQNHLSVHDCHNEGRRKSTDGAK 238

Query: 138 GSTNVNLSNIMNQGNCTPTRNTTAPTVVHVSRPKEVEITRRDLPIV 1
              N  LSN  N  NC+  R+ T P VVHVSRPKEVE  R +LPIV
Sbjct: 239 AVQNAILSNSTNSANCSSERDLTTPVVVHVSRPKEVENNRSNLPIV 284


>ref|XP_011007809.1| PREDICTED: probable ATP-dependent RNA helicase DHX37 [Populus
           euphratica]
          Length = 1203

 Score = 57.0 bits (136), Expect = 5e-06
 Identities = 45/122 (36%), Positives = 60/122 (49%), Gaps = 5/122 (4%)
 Frame = -3

Query: 351 RELQNHISASFQSSHELVWRNEPATLGEDA-ALTGEEVTSETSKLLIPEQPENSKRAFLP 175
           RE+QNH S S    H+ V  NE    G    A + EEV  E +     E P+ S      
Sbjct: 127 REVQNHASFSLVY-HDPVSGNELGLNGRSVFAFSAEEVAIEDNCTPTLEVPKKSSET--S 183

Query: 174 SEEQAESLATVTG----STNVNLSNIMNQGNCTPTRNTTAPTVVHVSRPKEVEITRRDLP 7
           S+  A   +++ G    ++ V+L    N  +    R  T PTVVHVSRP EVE  R+DLP
Sbjct: 184 SDRDARKTSSLMGKLDENSTVDLGKASNFPDFPLPRPPTTPTVVHVSRPDEVEKKRKDLP 243

Query: 6   IV 1
           I+
Sbjct: 244 II 245


>ref|XP_004294749.1| PREDICTED: putative ATP-dependent RNA helicase PB1A10.06c [Fragaria
           vesca subsp. vesca]
          Length = 1320

 Score = 56.6 bits (135), Expect = 6e-06
 Identities = 43/123 (34%), Positives = 63/123 (51%), Gaps = 5/123 (4%)
 Frame = -3

Query: 354 ERELQNHISASFQSSHELVWRNEPATLGEDAALTGEEVTSETSKLLIPEQPENSKRAFL- 178
           ++E+    S    SS  +V      T G  AA       S +SK++I ++ + S   ++ 
Sbjct: 168 QKEIHKTASVCLNSSQGIVSSRGHVTDGGPAA-------SSSSKIVICKEHDVSLPEYVT 220

Query: 177 PSE----EQAESLATVTGSTNVNLSNIMNQGNCTPTRNTTAPTVVHVSRPKEVEITRRDL 10
           P+E    E+ ES+  V GS  V  S      +    R+  APT+V+VSRP EVE TR+DL
Sbjct: 221 PNENDDHERTESMDRVKGSPKVTSSRTSEVSDFAEPRSLIAPTIVNVSRPVEVENTRKDL 280

Query: 9   PIV 1
           PIV
Sbjct: 281 PIV 283


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