BLASTX nr result
ID: Forsythia21_contig00031900
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Forsythia21_contig00031900
(1733 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_011076550.1| PREDICTED: pentatricopeptide repeat-containi... 681 0.0
ref|XP_012858826.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope... 644 0.0
emb|CDP13864.1| unnamed protein product [Coffea canephora] 641 0.0
ref|XP_006358175.1| PREDICTED: pentatricopeptide repeat-containi... 640 0.0
ref|XP_009759176.1| PREDICTED: pentatricopeptide repeat-containi... 639 e-180
ref|XP_009599439.1| PREDICTED: pentatricopeptide repeat-containi... 639 e-180
ref|XP_004235443.1| PREDICTED: pentatricopeptide repeat-containi... 632 e-178
emb|CBI39452.3| unnamed protein product [Vitis vinifera] 629 e-177
ref|XP_002266503.1| PREDICTED: pentatricopeptide repeat-containi... 629 e-177
ref|XP_002511627.1| pentatricopeptide repeat-containing protein,... 622 e-175
ref|XP_010103831.1| hypothetical protein L484_024133 [Morus nota... 615 e-173
gb|EYU20150.1| hypothetical protein MIMGU_mgv1a002588mg [Erythra... 610 e-171
ref|XP_011042452.1| PREDICTED: pentatricopeptide repeat-containi... 609 e-171
gb|KHF97527.1| hypothetical protein F383_12018 [Gossypium arboreum] 607 e-171
ref|XP_006375239.1| hypothetical protein POPTR_0014s05550g [Popu... 606 e-170
ref|XP_012083857.1| PREDICTED: pentatricopeptide repeat-containi... 605 e-170
ref|XP_007052225.1| Tetratricopeptide repeat (TPR)-like superfam... 603 e-169
gb|KJB24854.1| hypothetical protein B456_004G164900 [Gossypium r... 603 e-169
ref|XP_012475332.1| PREDICTED: pentatricopeptide repeat-containi... 598 e-168
ref|XP_008344150.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope... 597 e-168
>ref|XP_011076550.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
chloroplastic [Sesamum indicum]
Length = 790
Score = 681 bits (1757), Expect = 0.0
Identities = 343/513 (66%), Positives = 403/513 (78%)
Frame = -3
Query: 1539 FSTSLFPSNLTHLFSKQXXXXXXXXXXAVEPNKSEDDIHIQNAKPTKSKKARTMARLINT 1360
+STSLFPS+L H+FS+Q + +D ++ AK T+ KARTMA+LINT
Sbjct: 88 YSTSLFPSSLKHVFSEQPTTAS------ASSTTTGEDTPVRRAKSTR--KARTMAKLINT 139
Query: 1359 KPWSAQLESSLSTHTPLSETSVLQTLRLIKAPANALHFFNWTRNTGFAHSEHSYFLMLEN 1180
KPWSA++ES LS +P SET+ QTLRLIKAP+ AL FFNW +++GF HS SYF+MLE
Sbjct: 140 KPWSARVESCLSNLSPFSETTFFQTLRLIKAPSEALRFFNWAQDSGFNHSHRSYFMMLEI 199
Query: 1179 FGRARNLNSARNFLLSIPAKSNSAVPLTDKLFNSLIRSYGNAGLFKESIKVFKTMKSMGI 1000
GRARNLN ARNFL SIP KSN VPLTDK FNSLIRSYG+AGLF+ES+KVFK MKSM I
Sbjct: 200 LGRARNLNMARNFLFSIPRKSNYMVPLTDKFFNSLIRSYGDAGLFQESMKVFKVMKSMVI 259
Query: 999 SPSTFTFNHLFFILLKRGRTGMVFELYDEMLRTYGAKPDLYTFNILIRGFCMNSRMDDGF 820
SPST TFN LF ILLKRGR MVFELYDEMLRTYG KPDLYTFNILIRGFCMNS++D+ F
Sbjct: 260 SPSTVTFNSLFLILLKRGRVAMVFELYDEMLRTYGVKPDLYTFNILIRGFCMNSKVDEAF 319
Query: 819 RFFKEMELFKCKPDLISYNTIVEGLCRAGKVKIAHNVVKGMCLKGENLKPNVVTYTTLVR 640
R FKEME F+C+PDLI+YNTIV+GLCRAGKV +A NVV GM K E L+PNVV+YTTL+R
Sbjct: 320 RMFKEMERFECEPDLITYNTIVDGLCRAGKVNVARNVVNGMSKKCEKLRPNVVSYTTLIR 379
Query: 639 GYCRNQEIDMMLDVLREMVDSGIKPNEITYNTIIQGLCEARMYDKIKDILEGCRGESGGF 460
G+C QEID +DV R+MV SGIKPNEIT NTIIQGLC ++ +D IK+ILE C+ + GF
Sbjct: 380 GFCGRQEIDEAMDVFRQMVSSGIKPNEITCNTIIQGLCASQKFDMIKEILEECQVDGRGF 439
Query: 459 VPNTCTFNMVMNSHCNVGDLNEAFKVFEKMKELKVQQDSASYSLLIRGLCQKLEFGRAXX 280
VP+TCTFN VMN+HCN +L+EA KVFEKMKE+ V+QDSA+YS+LIR LC+K +F +A
Sbjct: 440 VPDTCTFNTVMNAHCNEENLDEALKVFEKMKEMNVKQDSATYSMLIRALCKKKKFDKAEE 499
Query: 279 XXXXXXXXXXXLRDDGCTPLVAAYNPIFEYLCRNGKTKKAERVLRQLMRRGKQDPPAYRT 100
LR+D TPL AAYNPIFEYLC NGKTKKAERV RQLM+RG QDP A+ T
Sbjct: 500 LLDELFEQEILLRNDNTTPLAAAYNPIFEYLCTNGKTKKAERVFRQLMKRGIQDPHAFET 559
Query: 99 LILGHCKEGTCVAGHKILVLMLRRNFVPDLETY 1
+ILGHC EGT VAG+K+LVLMLRR FV D+E Y
Sbjct: 560 MILGHCTEGTFVAGYKLLVLMLRRAFVLDVEVY 592
Score = 87.0 bits (214), Expect = 4e-14
Identities = 77/347 (22%), Positives = 139/347 (40%), Gaps = 44/347 (12%)
Frame = -3
Query: 1203 SYFLMLENFGRARNLNSARNFLLSIPAKSNSAVPLTDKLFNSLIRSYGNAGLFKESIKVF 1024
+Y +++ RA +N ARN + + K P + +LIR + E++ VF
Sbjct: 336 TYNTIVDGLCRAGKVNVARNVVNGMSKKCEKLRPNVVS-YTTLIRGFCGRQEIDEAMDVF 394
Query: 1023 KTMKSMGISPSTFTFNHLFFILLKRGRTGMVFELYDE-MLRTYGAKPDLYTFNILIRGFC 847
+ M S GI P+ T N + L + M+ E+ +E + G PD TFN ++ C
Sbjct: 395 RQMVSSGIKPNEITCNTIIQGLCASQKFDMIKEILEECQVDGRGFVPDTCTFNTVMNAHC 454
Query: 846 MNSRMDDGFRFFKEMELFKCKPDLISYNTIVEGLCRAGKVKIAHNVV-----KGMCLKGE 682
+D+ + F++M+ K D +Y+ ++ LC+ K A ++ + + L+ +
Sbjct: 455 NEENLDEALKVFEKMKEMNVKQDSATYSMLIRALCKKKKFDKAEELLDELFEQEILLRND 514
Query: 681 NLKPNVVTYTTLVRGYCRNQEIDMMLDVLREMVDSGIKPNEI------------------ 556
N P Y + C N + V R+++ GI+
Sbjct: 515 NTTPLAAAYNPIFEYLCTNGKTKKAERVFRQLMKRGIQDPHAFETMILGHCTEGTFVAGY 574
Query: 555 ----------------TYNTIIQGLCEARMYDKIKDILEGCRGESGGFVPNTCTFNMVMN 424
Y ++I+GL ++R + D L S +P T TF+ V+
Sbjct: 575 KLLVLMLRRAFVLDVEVYESLIEGLLQSREPNLAHDTLVKMMKSS--HLPRTSTFHRVLM 632
Query: 423 SHCNVGDLNEAFKVFEKMKELKVQQ----DSASYSLLIRGLCQKLEF 295
+G NE+ + M + K++ + + LL RG Q F
Sbjct: 633 ELIEIGSANESADLMMLMLDKKIRPYMNLSTDAVRLLFRGSMQNRAF 679
>ref|XP_012858826.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g02060, chloroplastic [Erythranthe guttatus]
Length = 742
Score = 644 bits (1661), Expect = 0.0
Identities = 322/525 (61%), Positives = 390/525 (74%), Gaps = 1/525 (0%)
Frame = -3
Query: 1572 LKIPLSKSTRPFSTSLFPSNLTHLFSKQXXXXXXXXXXAVEPNKSEDDIHIQNAKPTKSK 1393
+K LSK +STSLFPSNL + FSK A + + E+D QN+ KSK
Sbjct: 19 IKTQLSKFKLSYSTSLFPSNLKNAFSKTPTTTASAAAAAAKTIQIEEDTPSQNSNCNKSK 78
Query: 1392 KARTMARLINTKPWSAQLESSLSTH-TPLSETSVLQTLRLIKAPANALHFFNWTRNTGFA 1216
KA A+LINTKPW+A LES LST TPLS+T+ QTLR IK P+NAL FFNW +++GF
Sbjct: 79 KAIAAAKLINTKPWAAPLESRLSTALTPLSQTAFFQTLRRIKTPSNALRFFNWAQSSGFT 138
Query: 1215 HSEHSYFLMLENFGRARNLNSARNFLLSIPAKSNSAVPLTDKLFNSLIRSYGNAGLFKES 1036
H+ HSYF+ML+ GRAR+LN ARNFL SIP KSN+ VPLTDK FNSLIRSYG+AGL++ES
Sbjct: 139 HNHHSYFIMLQILGRARHLNPARNFLFSIPKKSNNTVPLTDKFFNSLIRSYGDAGLYQES 198
Query: 1035 IKVFKTMKSMGISPSTFTFNHLFFILLKRGRTGMVFELYDEMLRTYGAKPDLYTFNILIR 856
+K+F+ MKSM +SPST TFN LF ILLKRGR GMVFELY+EML+TYGAKPD YTFN+LIR
Sbjct: 199 LKIFQVMKSMAVSPSTVTFNSLFSILLKRGRMGMVFELYNEMLKTYGAKPDSYTFNVLIR 258
Query: 855 GFCMNSRMDDGFRFFKEMELFKCKPDLISYNTIVEGLCRAGKVKIAHNVVKGMCLKGENL 676
G CMNS +D+ FR FKEME F CKPDLI+YNTIV+GLCR GKV IA NVV G+ E+L
Sbjct: 259 GLCMNSSVDEAFRMFKEMEKFDCKPDLITYNTIVDGLCRTGKVSIARNVVTGLFKTCEDL 318
Query: 675 KPNVVTYTTLVRGYCRNQEIDMMLDVLREMVDSGIKPNEITYNTIIQGLCEARMYDKIKD 496
+PNVVTYTTL+RGYC +EI+ DV REM+ GI PNEIT NT+IQGLCE+R +D IK+
Sbjct: 319 RPNVVTYTTLIRGYCGKREIEEAFDVFREMIGGGITPNEITCNTLIQGLCESRKFDMIKE 378
Query: 495 ILEGCRGESGGFVPNTCTFNMVMNSHCNVGDLNEAFKVFEKMKELKVQQDSASYSLLIRG 316
+L C G VP+TCTFN +MN+HCN G+L EA FEKMKE+ V++DSA+YS++IR
Sbjct: 379 VLREC---GGTIVPDTCTFNTMMNAHCNSGNLEEALIFFEKMKEMNVKRDSATYSVIIRA 435
Query: 315 LCQKLEFGRAXXXXXXXXXXXXXLRDDGCTPLVAAYNPIFEYLCRNGKTKKAERVLRQLM 136
LC+K F +A LR D CTP++AAYNPIF YLC NGKTKKAERV RQLM
Sbjct: 436 LCEKGSFEKAEELLDELFGEEILLRGDNCTPIIAAYNPIFNYLCTNGKTKKAERVFRQLM 495
Query: 135 RRGKQDPPAYRTLILGHCKEGTCVAGHKILVLMLRRNFVPDLETY 1
+RG DP A+ TLI G CKEG H +L+LMLRR+F+P ++ Y
Sbjct: 496 KRGTHDPIAFETLIFGQCKEGNFQDAHNLLILMLRRDFLPSVKIY 540
>emb|CDP13864.1| unnamed protein product [Coffea canephora]
Length = 751
Score = 641 bits (1653), Expect = 0.0
Identities = 306/483 (63%), Positives = 381/483 (78%)
Frame = -3
Query: 1449 PNKSEDDIHIQNAKPTKSKKARTMARLINTKPWSAQLESSLSTHTPLSETSVLQTLRLIK 1270
PN I + TK+K+ARTMARLIN +PWS L++SL+ + LS+T+VLQTLRLI
Sbjct: 51 PNNGHAQISKSKSSSTKTKRARTMARLINARPWSTDLQASLA-QSSLSQTTVLQTLRLIT 109
Query: 1269 APANALHFFNWTRNTGFAHSEHSYFLMLENFGRARNLNSARNFLLSIPAKSNSAVPLTDK 1090
PA ALHFF+W +GF H+ SYFLMLE +ARN NSARNFLLSIP KSN AV L DK
Sbjct: 110 TPAKALHFFHWAHKSGFTHTPQSYFLMLELLCQARNFNSARNFLLSIPRKSNGAVQLEDK 169
Query: 1089 LFNSLIRSYGNAGLFKESIKVFKTMKSMGISPSTFTFNHLFFILLKRGRTGMVFELYDEM 910
FN LIR++G AGLFKES+K+FKTMKS+G+SPS TFNHLF ILLKRGRTGMVFEL+DEM
Sbjct: 170 HFNCLIRAFGEAGLFKESLKIFKTMKSIGVSPSVITFNHLFSILLKRGRTGMVFELFDEM 229
Query: 909 LRTYGAKPDLYTFNILIRGFCMNSRMDDGFRFFKEMELFKCKPDLISYNTIVEGLCRAGK 730
L TYG +PDLY+FNILIRGFC NS +D+GFRFFK+ME F C+PD+I+YNTI++GLC+ G+
Sbjct: 230 LETYGVEPDLYSFNILIRGFCKNSMVDEGFRFFKKMEKFNCQPDVITYNTIIDGLCKDGR 289
Query: 729 VKIAHNVVKGMCLKGENLKPNVVTYTTLVRGYCRNQEIDMMLDVLREMVDSGIKPNEITY 550
VKIAHNV+KGM KG NL PN+VTYTTL+RGYC EID LDV E+ G+KPNEIT
Sbjct: 290 VKIAHNVMKGMLNKGPNLSPNIVTYTTLIRGYCEKLEIDEALDVFEEIACRGLKPNEITC 349
Query: 549 NTIIQGLCEARMYDKIKDILEGCRGESGGFVPNTCTFNMVMNSHCNVGDLNEAFKVFEKM 370
NT++QGLCEARM +K+K+IL+GC GE+GGFVP+TCTFN +MN+HC+ G+L+ FK+F+KM
Sbjct: 350 NTLVQGLCEARMLNKVKEILDGCGGENGGFVPDTCTFNTLMNAHCSDGNLDGVFKIFQKM 409
Query: 369 KELKVQQDSASYSLLIRGLCQKLEFGRAXXXXXXXXXXXXXLRDDGCTPLVAAYNPIFEY 190
ELKV DSA+YS+LIR C+K F +A L D GCTPLVA+YNP+F Y
Sbjct: 410 SELKVHPDSATYSMLIRSFCEKGNFEKAEGLFRELYEKEILLHDAGCTPLVASYNPMFRY 469
Query: 189 LCRNGKTKKAERVLRQLMRRGKQDPPAYRTLILGHCKEGTCVAGHKILVLMLRRNFVPDL 10
L ++GKT+ AE+V +QL++RG+QD A++T+++GHC+EGT A +ILVLMLRR+FVPD
Sbjct: 470 LTQSGKTEMAEKVFKQLLKRGRQDASAFKTIMMGHCREGTVKAAFEILVLMLRRDFVPDF 529
Query: 9 ETY 1
ETY
Sbjct: 530 ETY 532
Score = 79.7 bits (195), Expect = 7e-12
Identities = 60/227 (26%), Positives = 103/227 (45%), Gaps = 7/227 (3%)
Frame = -3
Query: 1005 GISPSTFTFNHLFFILLKRGRTGMVFELYDEMLRTYGAKPDLYTFNILIRGFCMNSRMDD 826
G P T TFN L G VF+++ +M PD T+++LIR FC +
Sbjct: 378 GFVPDTCTFNTLMNAHCSDGNLDGVFKIFQKMSELK-VHPDSATYSMLIRSFCEKGNFEK 436
Query: 825 GFRFFKEM---ELFK----CKPDLISYNTIVEGLCRAGKVKIAHNVVKGMCLKGENLKPN 667
F+E+ E+ C P + SYN + L ++GK ++A V K + +G + +
Sbjct: 437 AEGLFRELYEKEILLHDAGCTPLVASYNPMFRYLTQSGKTEMAEKVFKQLLKRG---RQD 493
Query: 666 VVTYTTLVRGYCRNQEIDMMLDVLREMVDSGIKPNEITYNTIIQGLCEARMYDKIKDILE 487
+ T++ G+CR + ++L M+ P+ TY ++I+GL E + LE
Sbjct: 494 ASAFKTIMMGHCREGTVKAAFEILVLMLRRDFVPDFETYESLIEGLLEKDEPILAHETLE 553
Query: 486 GCRGESGGFVPNTCTFNMVMNSHCNVGDLNEAFKVFEKMKELKVQQD 346
S +P T F+ + N G +E+F + M E K++ +
Sbjct: 554 KMLKSS--HLPRTSIFHRTLARLVNKGCAHESFSMLMLMLEKKIRHN 598
Score = 67.8 bits (164), Expect = 3e-08
Identities = 60/282 (21%), Positives = 120/282 (42%), Gaps = 36/282 (12%)
Frame = -3
Query: 1086 FNSLIRSY---GN----AGLFKESIKVFKTMKSMGISPSTFTFNHLFFILLKRGRTGMVF 928
++ LIRS+ GN GLF+E + + G +P ++N +F L + G+T M
Sbjct: 421 YSMLIRSFCEKGNFEKAEGLFRELYEKEILLHDAGCTPLVASYNPMFRYLTQSGKTEMAE 480
Query: 927 ELYDEMLRTYGAKPDLYTFNILIRGFCMNSRMDDGFRFFKEMELFKCKPDLISYNTIVEG 748
+++ ++L+ + D F ++ G C + F M PD +Y +++EG
Sbjct: 481 KVFKQLLKR--GRQDASAFKTIMMGHCREGTVKAAFEILVLMLRRDFVPDFETYESLIEG 538
Query: 747 LCRAGKVKIAHNVVKGMCLKGENLKPNVVTYTTLVRGY---CRNQEIDMMLDVLREMVDS 577
L + +AH ++ M LK +L + + TL R C ++ M++ +L + +
Sbjct: 539 LLEKDEPILAHETLEKM-LKSSHLPRTSIFHRTLARLVNKGCAHESFSMLMLMLEKKIRH 597
Query: 576 GIKPNEITYNTIIQGLCEARMYDKIKDILEG-------------CR-------------G 475
+ T N + + + ++ ++ + E C+ G
Sbjct: 598 NLNIATDTVNVLFKAGMRDKAFEVVRCLYEHGYIINMEELIIFLCKQRKLLEAREMLLFG 657
Query: 474 ESGGFVPNTCTFNMVMNSHCNVGDLNEAFKVFEKMKELKVQQ 349
G + N V+N C + +NEAF+++ ++ E +QQ
Sbjct: 658 TKKGQRVDLGVCNTVLNGLCKIKRVNEAFELYYELLEQGIQQ 699
>ref|XP_006358175.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
chloroplastic-like isoform X1 [Solanum tuberosum]
Length = 718
Score = 640 bits (1652), Expect = 0.0
Identities = 315/490 (64%), Positives = 383/490 (78%), Gaps = 6/490 (1%)
Frame = -3
Query: 1452 EPNKSEDDIHIQNAKP----TKSKKARTMARLINTKPWSAQLESSLS--THTPLSETSVL 1291
+ K+++ H+ N KP +KSKKAR +A +INT PWS+ LESSLS T LS T+VL
Sbjct: 31 QTTKTKNGKHLDNPKPKSSSSKSKKARNIASIINTNPWSSHLESSLSSLTQPSLSHTTVL 90
Query: 1290 QTLRLIKAPANALHFFNWTRNTGFAHSEHSYFLMLENFGRARNLNSARNFLLSIPAKSNS 1111
TLR IK P AL+FFNWT+ GF H+ SY LML+ G +R+LNSARNFLLSIP +SN
Sbjct: 91 HTLRFIKIPFKALYFFNWTQKMGFQHTHQSYLLMLQLLGSSRSLNSARNFLLSIPRRSNG 150
Query: 1110 AVPLTDKLFNSLIRSYGNAGLFKESIKVFKTMKSMGISPSTFTFNHLFFILLKRGRTGMV 931
VPL D+ FN+LI+SYG AGLF+ES+KVFK MKS+GISPS TFN LF ILLKRGRTGMV
Sbjct: 151 TVPLQDRYFNTLIQSYGKAGLFQESLKVFKVMKSLGISPSVVTFNSLFSILLKRGRTGMV 210
Query: 930 FELYDEMLRTYGAKPDLYTFNILIRGFCMNSRMDDGFRFFKEMELFKCKPDLISYNTIVE 751
+EL+DEML+T+GAKPD+YTFNILIRGFCMNS +D GFRFFKEME +C+PD+I+YNTIV+
Sbjct: 211 YELFDEMLKTFGAKPDVYTFNILIRGFCMNSMVDKGFRFFKEMERHECEPDVITYNTIVD 270
Query: 750 GLCRAGKVKIAHNVVKGMCLKGENLKPNVVTYTTLVRGYCRNQEIDMMLDVLREMVDSGI 571
GLCRAGKV+IAHNV+KGM +G L PNVV+YTTLVRGYC QE++ LDV EM+D G+
Sbjct: 271 GLCRAGKVEIAHNVLKGMVKRGHQLSPNVVSYTTLVRGYCEKQEVERALDVFEEMIDCGL 330
Query: 570 KPNEITYNTIIQGLCEARMYDKIKDILEGCRGESGGFVPNTCTFNMVMNSHCNVGDLNEA 391
KP ITYNT++QGLCEA+ +D+IK+ILEG G SGG +P+TCTFN ++ HCNVG+L+EA
Sbjct: 331 KPTSITYNTLVQGLCEAKRFDRIKEILEGTLG-SGGLIPDTCTFNTLITFHCNVGNLDEA 389
Query: 390 FKVFEKMKELKVQQDSASYSLLIRGLCQKLEFGRAXXXXXXXXXXXXXLRDDGCTPLVAA 211
KVFE M LKV+ DSA+YS+LIR CQK F RA LRDDGCTPL+AA
Sbjct: 390 VKVFENMLYLKVKPDSATYSILIRSFCQKGYFDRAEKLFDDLMKKEILLRDDGCTPLIAA 449
Query: 210 YNPIFEYLCRNGKTKKAERVLRQLMRRGKQDPPAYRTLILGHCKEGTCVAGHKILVLMLR 31
YNP+FEY C+ GKTKKAE+V RQLMRRG QDP AY LI+GHCKEGT H++LVLMLR
Sbjct: 450 YNPMFEYFCKIGKTKKAEKVFRQLMRRGTQDPFAYELLIMGHCKEGTFNDAHELLVLMLR 509
Query: 30 RNFVPDLETY 1
R++VP++ Y
Sbjct: 510 RDYVPNIVIY 519
Score = 85.5 bits (210), Expect = 1e-13
Identities = 84/393 (21%), Positives = 161/393 (40%), Gaps = 12/393 (3%)
Frame = -3
Query: 1257 ALHFFNWTRNTGFAHSEHSYFLMLENFGRARNLNSARNFLLSIPAKSNSAVPLTDKLFNS 1078
AL F + G + +Y +++ A+ + + +L S +P T FN+
Sbjct: 318 ALDVFEEMIDCGLKPTSITYNTLVQGLCEAKRFDRIKE-ILEGTLGSGGLIPDTCT-FNT 375
Query: 1077 LIRSYGNAGLFKESIKVFKTMKSMGISPSTFTFNHLFFILLKRGRTGMVFELYDEM---- 910
LI + N G E++KVF+ M + + P + T++ L ++G +L+D++
Sbjct: 376 LITFHCNVGNLDEAVKVFENMLYLKVKPDSATYSILIRSFCQKGYFDRAEKLFDDLMKKE 435
Query: 909 --LRTYGAKPDLYTFNILIRGFCMNSRMDDGFRFFKEMELFKCKPDLISYNTIVEGLCRA 736
LR G P + +N + FC + + F+++ + + D +Y ++ G C+
Sbjct: 436 ILLRDDGCTPLIAAYNPMFEYFCKIGKTKKAEKVFRQL-MRRGTQDPFAYELLIMGHCKE 494
Query: 735 GKVKIAHNVVKGMCLKGENLKPNVVTYTTLVRGYCRNQEIDMMLDVLREMVDSGIKPNEI 556
G AH ++ M + + PN+V Y +L+ G + + + D L +M+ S P
Sbjct: 495 GTFNDAHELLVLMLRR--DYVPNIVIYESLIEGLLQKNDPKVAYDTLEKMLKSSHLPRSS 552
Query: 555 TYNTIIQGLCEARMYDKIKDILEGCRGESGGFVPNTCTFNMVMNSHCNVGDLNEAF---- 388
T++ I+ L I + C E V + N + + + F
Sbjct: 553 TFHQILTEL-----------IKKNCASECASLVTLMLDNKVRQNINLSTDTVRILFQAGL 601
Query: 387 --KVFEKMKELKVQQDSASYSLLIRGLCQKLEFGRAXXXXXXXXXXXXXLRDDGCTPLVA 214
+ FE ++ L + L+ LCQ + A L D C+ L++
Sbjct: 602 RERAFEIVRCLYENEYVVDMEGLVAFLCQCRKLLEACKLLLFSSSKGHILNVDTCSTLLS 661
Query: 213 AYNPIFEYLCRNGKTKKAERVLRQLMRRGKQDP 115
A LC+ +T +A + +L+ +G Q P
Sbjct: 662 A-------LCKASRTLEAFEIYYELLEKGVQQP 687
>ref|XP_009759176.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
chloroplastic [Nicotiana sylvestris]
Length = 764
Score = 639 bits (1649), Expect = e-180
Identities = 326/528 (61%), Positives = 395/528 (74%), Gaps = 9/528 (1%)
Frame = -3
Query: 1557 SKSTRPFSTSLFPSNLTHLFSKQXXXXXXXXXXAVEPNKSEDDIHIQNA---KPT----K 1399
S + P+ +S S L+ LFSKQ + NK ++ + N KP+ K
Sbjct: 28 SSTLLPYLSSHPLSTLSQLFSKQTANP-------TKTNKPKNGKQLNNPPKPKPSSCSSK 80
Query: 1398 SKKARTMARLINTKPWSAQLESSLS--THTPLSETSVLQTLRLIKAPANALHFFNWTRNT 1225
SK A MA LINT WS+ LESSLS T LS T+VL TLR IK P+ AL+FFNWT+
Sbjct: 81 SKTAANMANLINTNIWSSNLESSLSSLTQPSLSHTTVLHTLRFIKKPSKALNFFNWTQKL 140
Query: 1224 GFAHSEHSYFLMLENFGRARNLNSARNFLLSIPAKSNSAVPLTDKLFNSLIRSYGNAGLF 1045
GF+H+ SYFLML+ G ARNLNSARNFL SIP +SN VPL DK FN+LIRSYG AGLF
Sbjct: 141 GFSHTHQSYFLMLQLLGNARNLNSARNFLFSIPTRSNGTVPLQDKYFNTLIRSYGKAGLF 200
Query: 1044 KESIKVFKTMKSMGISPSTFTFNHLFFILLKRGRTGMVFELYDEMLRTYGAKPDLYTFNI 865
+ES+KVFKTMKS+GISPS TFN LF ILLKRGRTGMV++L+DEML+TYGAKPD YTFNI
Sbjct: 201 QESLKVFKTMKSLGISPSVVTFNSLFTILLKRGRTGMVYDLFDEMLKTYGAKPDSYTFNI 260
Query: 864 LIRGFCMNSRMDDGFRFFKEMELFKCKPDLISYNTIVEGLCRAGKVKIAHNVVKGMCLKG 685
LIRGFCMNS +D GFRFFKEME +C+PD+I+YNTI++GLCRAGKVKIAHNV+KGM +G
Sbjct: 261 LIRGFCMNSMVDQGFRFFKEMERHECEPDVITYNTIIDGLCRAGKVKIAHNVLKGMVKRG 320
Query: 684 ENLKPNVVTYTTLVRGYCRNQEIDMMLDVLREMVDSGIKPNEITYNTIIQGLCEARMYDK 505
L PNVV+YTTLVRGYC QE++ LDV +EM+D G+KP ITYNT++QGLCEA+ +D+
Sbjct: 321 HQLSPNVVSYTTLVRGYCEKQEVEHALDVFKEMIDLGLKPTSITYNTLVQGLCEAQKFDR 380
Query: 504 IKDILEGCRGESGGFVPNTCTFNMVMNSHCNVGDLNEAFKVFEKMKELKVQQDSASYSLL 325
IK+ILE G G F+P+TCTFN ++ HCNVG+L+E+ KVFE M +LKV+ DSA+YS+L
Sbjct: 381 IKEILERTLG-GGRFIPDTCTFNTLITYHCNVGNLDESMKVFESMSDLKVKPDSATYSIL 439
Query: 324 IRGLCQKLEFGRAXXXXXXXXXXXXXLRDDGCTPLVAAYNPIFEYLCRNGKTKKAERVLR 145
IR CQK F RA L DDGC PLVAAYNP+FE+LC+ GKTKKAE+V R
Sbjct: 440 IRSFCQKGYFDRAEKLFDKLMKTEVLLCDDGCKPLVAAYNPLFEHLCKIGKTKKAEKVFR 499
Query: 144 QLMRRGKQDPPAYRTLILGHCKEGTCVAGHKILVLMLRRNFVPDLETY 1
QLMRRG QDP AYR LI+GHC+E T H++LVLMLRR++VPD+E Y
Sbjct: 500 QLMRRGTQDPLAYRILIMGHCRESTFNDAHELLVLMLRRDYVPDIEIY 547
Score = 71.2 bits (173), Expect = 2e-09
Identities = 69/285 (24%), Positives = 123/285 (43%), Gaps = 39/285 (13%)
Frame = -3
Query: 1086 FNSLIRSYGNAGLFKESIKVF-KTMKSM------GISPSTFTFNHLFFILLKRGRTGMVF 928
++ LIRS+ G F + K+F K MK+ G P +N LF L K G+T
Sbjct: 436 YSILIRSFCQKGYFDRAEKLFDKLMKTEVLLCDDGCKPLVAAYNPLFEHLCKIGKTKKAE 495
Query: 927 ELYDEMLRTYGAKPDLYTFNILIRGFCMNSRMDDGFRFFKEMELFKCKPDLISYNTIVEG 748
+++ +++R D + ILI G C S +D M PD+ Y +++EG
Sbjct: 496 KVFRQLMRR--GTQDPLAYRILIMGHCRESTFNDAHELLVLMLRRDYVPDIEIYESLIEG 553
Query: 747 LCRAGKVKIAHNVVKGMCLKGENLKPNVVTY----TTLVRGYCR---------------N 625
L + K+A++ ++ M LK +L P T+ T L++ C
Sbjct: 554 LLQKNDPKVAYDTLERM-LKSSHL-PRASTFHQILTELIKKNCTIECASLVKLMLDNKVR 611
Query: 624 QEIDMMLDVLREMVDSGIKPN-------------EITYNTIIQGLCEARMYDKIKDILEG 484
Q I + D +R + +G++ + ++ LC+ R + +D+L
Sbjct: 612 QSISLSTDTVRILFQTGLRERGFEIVRCLYENGYMVNMEGLVVSLCQCRKLLEARDLL-- 669
Query: 483 CRGESGGFVPNTCTFNMVMNSHCNVGDLNEAFKVFEKMKELKVQQ 349
S + N T + V+++ C +EAF+++ ++ E VQQ
Sbjct: 670 LFSLSKDHILNVDTCSTVLSALCKARRASEAFEMYYELLEKGVQQ 714
>ref|XP_009599439.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
chloroplastic [Nicotiana tomentosiformis]
Length = 765
Score = 639 bits (1648), Expect = e-180
Identities = 329/548 (60%), Positives = 400/548 (72%), Gaps = 11/548 (2%)
Frame = -3
Query: 1611 AFFPFSHHQSYTTLK--IPLSKSTRPFSTSLFPSNLTHLFSKQXXXXXXXXXXAVEPNKS 1438
A F H Q T +P S+ P ST L+ LF+KQ + NK
Sbjct: 15 AIFTARHFQHICTTSTLLPYLLSSHPLST------LSQLFTKQTANP-------TKTNKP 61
Query: 1437 EDDIHIQNA-KP------TKSKKARTMARLINTKPWSAQLESSLS--THTPLSETSVLQT 1285
++ + N KP +KSK A MA LINT WS+ LESSLS T LS T+VL T
Sbjct: 62 KNGKQLNNPPKPKSSSSSSKSKTAANMANLINTNTWSSNLESSLSSLTQPSLSHTTVLHT 121
Query: 1284 LRLIKAPANALHFFNWTRNTGFAHSEHSYFLMLENFGRARNLNSARNFLLSIPAKSNSAV 1105
LR IK P+ ALHFFNWT+ GF+H+ SYFLML+ G ARNLNSARNFL SIP +S + V
Sbjct: 122 LRFIKKPSKALHFFNWTQKLGFSHTHQSYFLMLQLLGNARNLNSARNFLFSIPTRSKTTV 181
Query: 1104 PLTDKLFNSLIRSYGNAGLFKESIKVFKTMKSMGISPSTFTFNHLFFILLKRGRTGMVFE 925
PL DK FN+LIRSYG AGLF+ES+KVFKTMKS+GISPS TFN LF ILLKRGRTGMV++
Sbjct: 182 PLQDKYFNTLIRSYGKAGLFQESLKVFKTMKSLGISPSVVTFNSLFSILLKRGRTGMVYD 241
Query: 924 LYDEMLRTYGAKPDLYTFNILIRGFCMNSRMDDGFRFFKEMELFKCKPDLISYNTIVEGL 745
L+DEML+TYGAKPDLYTFNILIRGFCMNS +D GFRFFKEME +C+PD+I+YNTI++GL
Sbjct: 242 LFDEMLKTYGAKPDLYTFNILIRGFCMNSMVDQGFRFFKEMERHECEPDVITYNTIIDGL 301
Query: 744 CRAGKVKIAHNVVKGMCLKGENLKPNVVTYTTLVRGYCRNQEIDMMLDVLREMVDSGIKP 565
CRAGK +IAHNV+KGM +G L PNVV+YTTLVRGYC QE++ LDV +EM+D G+KP
Sbjct: 302 CRAGKARIAHNVLKGMVKRGHQLSPNVVSYTTLVRGYCEKQEVEHALDVFKEMIDLGLKP 361
Query: 564 NEITYNTIIQGLCEARMYDKIKDILEGCRGESGGFVPNTCTFNMVMNSHCNVGDLNEAFK 385
ITYNT++QGLCEA+ +D+IK+ILEG G GGF+P+TCTFN ++ H N G+L+EA K
Sbjct: 362 TSITYNTLVQGLCEAQKFDRIKEILEGTLG-GGGFIPDTCTFNTLITCHWNAGNLDEAMK 420
Query: 384 VFEKMKELKVQQDSASYSLLIRGLCQKLEFGRAXXXXXXXXXXXXXLRDDGCTPLVAAYN 205
VFE M +LKV+ DSA+YS+LIR CQK F RA L DDGC P+VAAYN
Sbjct: 421 VFESMSDLKVKPDSATYSILIRSFCQKGYFDRALKLFDELKKTDVLLCDDGCKPVVAAYN 480
Query: 204 PIFEYLCRNGKTKKAERVLRQLMRRGKQDPPAYRTLILGHCKEGTCVAGHKILVLMLRRN 25
+FE+LC+ GKTKKAE+V RQLMRRG QDP AYR LI+GHC+EGT H++LVLMLR++
Sbjct: 481 LMFEHLCKIGKTKKAEKVFRQLMRRGTQDPLAYRILIMGHCREGTFNDAHELLVLMLRKD 540
Query: 24 FVPDLETY 1
+VPD+E Y
Sbjct: 541 YVPDIEIY 548
Score = 89.0 bits (219), Expect = 1e-14
Identities = 82/365 (22%), Positives = 148/365 (40%), Gaps = 37/365 (10%)
Frame = -3
Query: 1098 TDKLFNSLIRSYGNAGLFKESIKVFK-TMKSMGISPSTFTFNHLFFILLKRGRTGMVFEL 922
T +N+L++ A F ++ + T+ G P T TFN L G ++
Sbjct: 362 TSITYNTLVQGLCEAQKFDRIKEILEGTLGGGGFIPDTCTFNTLITCHWNAGNLDEAMKV 421
Query: 921 YDEMLRTYGAKPDLYTFNILIRGFCMNSRMDDGFRFFKEMELFK-------CKPDLISYN 763
++ M KPD T++ILIR FC D + F E++ CKP + +YN
Sbjct: 422 FESM-SDLKVKPDSATYSILIRSFCQKGYFDRALKLFDELKKTDVLLCDDGCKPVVAAYN 480
Query: 762 TIVEGLCRAGKVKIAHNVVKGMCLKGENLKPNVVTYTTLVRGYCRNQEIDMMLDVLREMV 583
+ E LC+ GK K A V + + +G + + Y L+ G+CR + ++L M+
Sbjct: 481 LMFEHLCKIGKTKKAEKVFRQLMRRGTQ---DPLAYRILIMGHCREGTFNDAHELLVLML 537
Query: 582 DSGIKPNEITYNTIIQGLCEAR----MYDKIKDILEGCRGESGGFVPNTCTFNMVMNSHC 415
P+ Y ++I+GL + YD ++ +L+ +P + TF+ ++
Sbjct: 538 RKDYVPDIEIYESLIKGLLQKNDPKVAYDTLEKMLKSSH------LPRSSTFHQILTELI 591
Query: 414 NVGDLNEAFKVFEKMKELKVQQDSASYSLLIRGLCQKLEFGRAXXXXXXXXXXXXXLRDD 235
+E + + M + KV+Q + + +R LCQ RA + +
Sbjct: 592 KKNCASECASLVKLMLDNKVRQSISLSTDTVRILCQTGLRERAFEIVRCLYENGYMVNME 651
Query: 234 G-------CTPLVAAY------------------NPIFEYLCRNGKTKKAERVLRQLMRR 130
G C L+ A + + LC+ + +A + +L+ +
Sbjct: 652 GLVVSLCQCRKLLEARELLLFSLSKDHILNVDTCSTLLSALCKARRASEAFEIYYELLEK 711
Query: 129 GKQDP 115
G Q P
Sbjct: 712 GVQQP 716
Score = 69.3 bits (168), Expect = 9e-09
Identities = 71/331 (21%), Positives = 138/331 (41%), Gaps = 39/331 (11%)
Frame = -3
Query: 1224 GFAHSEHSYFLMLENFGRARNLNSARNFLLSIPAKSNSAVPLTDKLFNSLIRSYGNAGLF 1045
GF ++ ++ A NL+ A S+ S+ V ++ LIRS+ G F
Sbjct: 394 GFIPDTCTFNTLITCHWNAGNLDEAMKVFESM---SDLKVKPDSATYSILIRSFCQKGYF 450
Query: 1044 KESIKVFKTMKSM-------GISPSTFTFNHLFFILLKRGRTGMVFELYDEMLRTYGAKP 886
++K+F +K G P +N +F L K G+T +++ +++R
Sbjct: 451 DRALKLFDELKKTDVLLCDDGCKPVVAAYNLMFEHLCKIGKTKKAEKVFRQLMRR--GTQ 508
Query: 885 DLYTFNILIRGFCMNSRMDDGFRFFKEMELFKCKPDLISYNTIVEGLCRAGKVKIAHNVV 706
D + ILI G C +D M PD+ Y ++++GL + K+A++ +
Sbjct: 509 DPLAYRILIMGHCREGTFNDAHELLVLMLRKDYVPDIEIYESLIKGLLQKNDPKVAYDTL 568
Query: 705 KGMCLKGENLKPNVVTY----TTLVRGYCRN---------------QEIDMMLDVLREMV 583
+ M LK +L P T+ T L++ C + Q I + D +R +
Sbjct: 569 EKM-LKSSHL-PRSSTFHQILTELIKKNCASECASLVKLMLDNKVRQSISLSTDTVRILC 626
Query: 582 DSGIKPNE-------------ITYNTIIQGLCEARMYDKIKDILEGCRGESGGFVPNTCT 442
+G++ + ++ LC+ R + +++L S + N T
Sbjct: 627 QTGLRERAFEIVRCLYENGYMVNMEGLVVSLCQCRKLLEARELL--LFSLSKDHILNVDT 684
Query: 441 FNMVMNSHCNVGDLNEAFKVFEKMKELKVQQ 349
+ ++++ C +EAF+++ ++ E VQQ
Sbjct: 685 CSTLLSALCKARRASEAFEIYYELLEKGVQQ 715
>ref|XP_004235443.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
chloroplastic [Solanum lycopersicum]
Length = 710
Score = 632 bits (1630), Expect = e-178
Identities = 312/479 (65%), Positives = 377/479 (78%), Gaps = 6/479 (1%)
Frame = -3
Query: 1419 QNAKP----TKSKKARTMARLINTKPWSAQLESSLS--THTPLSETSVLQTLRLIKAPAN 1258
+N KP +KSKKAR +A +INT PWS+ LESSLS T LS T+VL TLR IK P+
Sbjct: 36 KNTKPKSSSSKSKKARKIATIINTNPWSSHLESSLSSITQPSLSHTTVLHTLRFIKIPSK 95
Query: 1257 ALHFFNWTRNTGFAHSEHSYFLMLENFGRARNLNSARNFLLSIPAKSNSAVPLTDKLFNS 1078
AL+FFNWT+ GF H+ SY LML+ G +R+LNSARNFLLSIP +SN AVPL D+ FN+
Sbjct: 96 ALYFFNWTQKMGFQHTHQSYLLMLQLLGSSRSLNSARNFLLSIPRRSNGAVPLQDRYFNT 155
Query: 1077 LIRSYGNAGLFKESIKVFKTMKSMGISPSTFTFNHLFFILLKRGRTGMVFELYDEMLRTY 898
LI+SYG AGLF+ES+KVFK MKS+GISPS TFN LF ILLKRGRTGMV+EL+DEML+T+
Sbjct: 156 LIQSYGKAGLFQESLKVFKVMKSLGISPSVVTFNSLFTILLKRGRTGMVYELFDEMLKTF 215
Query: 897 GAKPDLYTFNILIRGFCMNSRMDDGFRFFKEMELFKCKPDLISYNTIVEGLCRAGKVKIA 718
GAKPD+YTFNILIRGFC+NS +D GFRFFKEME +C+P++I+YNTIV+GLCRAGKV+IA
Sbjct: 216 GAKPDVYTFNILIRGFCINSMVDKGFRFFKEMERHECEPNVITYNTIVDGLCRAGKVEIA 275
Query: 717 HNVVKGMCLKGENLKPNVVTYTTLVRGYCRNQEIDMMLDVLREMVDSGIKPNEITYNTII 538
HNV+KGM +G L PNVV+YTTLVRGYC QE++ LDV EM+D G+KP ITYNT++
Sbjct: 276 HNVLKGMAKRGHQLSPNVVSYTTLVRGYCEKQEVERALDVFEEMIDRGLKPTSITYNTLV 335
Query: 537 QGLCEARMYDKIKDILEGCRGESGGFVPNTCTFNMVMNSHCNVGDLNEAFKVFEKMKELK 358
QGLCEA+ +D+IK+ILEG G SGG +P+TCTFN ++ HCNVG+L+EA KVFE M LK
Sbjct: 336 QGLCEAKRFDRIKEILEGTLG-SGGLIPDTCTFNTLITYHCNVGNLDEAVKVFENMLYLK 394
Query: 357 VQQDSASYSLLIRGLCQKLEFGRAXXXXXXXXXXXXXLRDDGCTPLVAAYNPIFEYLCRN 178
V+ DSA+YS+LIR CQK F RA LRDDGCTPL+AAYNP+FEY C+
Sbjct: 395 VKPDSATYSILIRSFCQKGYFDRAEKLFDDLMKKEVLLRDDGCTPLIAAYNPMFEYFCKI 454
Query: 177 GKTKKAERVLRQLMRRGKQDPPAYRTLILGHCKEGTCVAGHKILVLMLRRNFVPDLETY 1
GKTKKAE+V RQLMRRG QDP AY LI GHCKEGT H +LVLMLRR++VP++ Y
Sbjct: 455 GKTKKAEKVFRQLMRRGTQDPFAYELLIRGHCKEGTFNDAHGLLVLMLRRDYVPNIVIY 513
Score = 90.5 bits (223), Expect = 4e-15
Identities = 67/305 (21%), Positives = 130/305 (42%), Gaps = 5/305 (1%)
Frame = -3
Query: 1203 SYFLMLENFGRARNLNSARNFLLSIPAKSNSAVPLTDKLFNSLIRSYGNAGLFKESIKVF 1024
+Y +++ RA + A N L + + + P + +L+R Y + ++ VF
Sbjct: 258 TYNTIVDGLCRAGKVEIAHNVLKGMAKRGHQLSPNVVS-YTTLVRGYCEKQEVERALDVF 316
Query: 1023 KTMKSMGISPSTFTFNHLFFILLKRGRTGMVFELYDEMLRTYGAKPDLYTFNILIRGFCM 844
+ M G+ P++ T+N L L + R + E+ + L + G PD TFN LI C
Sbjct: 317 EEMIDRGLKPTSITYNTLVQGLCEAKRFDRIKEILEGTLGSGGLIPDTCTFNTLITYHCN 376
Query: 843 NSRMDDGFRFFKEMELFKCKPDLISYNTIVEGLCRAGKVKIAHNVV-----KGMCLKGEN 679
+D+ + F+ M K KPD +Y+ ++ C+ G A + K + L+ +
Sbjct: 377 VGNLDEAVKVFENMLYLKVKPDSATYSILIRSFCQKGYFDRAEKLFDDLMKKEVLLRDDG 436
Query: 678 LKPNVVTYTTLVRGYCRNQEIDMMLDVLREMVDSGIKPNEITYNTIIQGLCEARMYDKIK 499
P + Y + +C+ + V R+++ G + + Y +I+G C+ ++
Sbjct: 437 CTPLIAAYNPMFEYFCKIGKTKKAEKVFRQLMRRGTQ-DPFAYELLIRGHCKEGTFNDAH 495
Query: 498 DILEGCRGESGGFVPNTCTFNMVMNSHCNVGDLNEAFKVFEKMKELKVQQDSASYSLLIR 319
+L +VPN + ++ D A+ EKM + S+ Y ++
Sbjct: 496 GLLVLMLRRD--YVPNIVIYESLIEGLLQKNDPKVAYDTLEKMLKSSHLPRSSIYHQILT 553
Query: 318 GLCQK 304
L +K
Sbjct: 554 ELIKK 558
Score = 85.5 bits (210), Expect = 1e-13
Identities = 83/393 (21%), Positives = 160/393 (40%), Gaps = 12/393 (3%)
Frame = -3
Query: 1257 ALHFFNWTRNTGFAHSEHSYFLMLENFGRARNLNSARNFLLSIPAKSNSAVPLTDKLFNS 1078
AL F + G + +Y +++ A+ + + +L S +P T FN+
Sbjct: 312 ALDVFEEMIDRGLKPTSITYNTLVQGLCEAKRFDRIKE-ILEGTLGSGGLIPDTCT-FNT 369
Query: 1077 LIRSYGNAGLFKESIKVFKTMKSMGISPSTFTFNHLFFILLKRGRTGMVFELYDEM---- 910
LI + N G E++KVF+ M + + P + T++ L ++G +L+D++
Sbjct: 370 LITYHCNVGNLDEAVKVFENMLYLKVKPDSATYSILIRSFCQKGYFDRAEKLFDDLMKKE 429
Query: 909 --LRTYGAKPDLYTFNILIRGFCMNSRMDDGFRFFKEMELFKCKPDLISYNTIVEGLCRA 736
LR G P + +N + FC + + F+++ + + D +Y ++ G C+
Sbjct: 430 VLLRDDGCTPLIAAYNPMFEYFCKIGKTKKAEKVFRQL-MRRGTQDPFAYELLIRGHCKE 488
Query: 735 GKVKIAHNVVKGMCLKGENLKPNVVTYTTLVRGYCRNQEIDMMLDVLREMVDSGIKPNEI 556
G AH ++ M + + PN+V Y +L+ G + + + D L +M+ S P
Sbjct: 489 GTFNDAHGLLVLMLRR--DYVPNIVIYESLIEGLLQKNDPKVAYDTLEKMLKSSHLPRSS 546
Query: 555 TYNTIIQGLCEARMYDKIKDILEGCRGESGGFVPNTCTFNMVMNSHCNVGDLNEAF---- 388
Y+ I+ L I + C E V + N + + + F
Sbjct: 547 IYHQILTEL-----------IKKNCASECASLVTLMLDNKVRQNINLSTDTVKILFQTGL 595
Query: 387 --KVFEKMKELKVQQDSASYSLLIRGLCQKLEFGRAXXXXXXXXXXXXXLRDDGCTPLVA 214
+ FE ++ L + L+ LCQ+ + A L D C+ L++
Sbjct: 596 RERAFEIVRCLYENEYVVDMEGLVAFLCQRRKLLEACKLLLFSLSKGHILNVDTCSTLLS 655
Query: 213 AYNPIFEYLCRNGKTKKAERVLRQLMRRGKQDP 115
A LC+ + +A + +L+ +G Q P
Sbjct: 656 A-------LCKARRASEAFEIYYELLEKGVQQP 681
>emb|CBI39452.3| unnamed protein product [Vitis vinifera]
Length = 718
Score = 629 bits (1622), Expect = e-177
Identities = 310/469 (66%), Positives = 370/469 (78%), Gaps = 1/469 (0%)
Frame = -3
Query: 1404 TKSKKARTMARLINTKPWSAQLESSLSTHTP-LSETSVLQTLRLIKAPANALHFFNWTRN 1228
TK+K+++ MARLINT+PWS +L+SSL+ P LS+T+VLQTL+LI+ PA ALHFF W
Sbjct: 61 TKTKRSQAMARLINTEPWSHELQSSLAELAPSLSKTTVLQTLQLIRTPAKALHFFRWVEA 120
Query: 1227 TGFAHSEHSYFLMLENFGRARNLNSARNFLLSIPAKSNSAVPLTDKLFNSLIRSYGNAGL 1048
GF H+E SYFLM+E GR+RNLN+ARNF+ SI KS AV L D+ FNSLIRSYG AGL
Sbjct: 121 KGFTHNEQSYFLMIEILGRSRNLNAARNFVFSIEKKSGGAVKLGDRFFNSLIRSYGWAGL 180
Query: 1047 FKESIKVFKTMKSMGISPSTFTFNHLFFILLKRGRTGMVFELYDEMLRTYGAKPDLYTFN 868
F+ESIKVFKTMK +G+SPS TFN L I+LKRGRT M +L+DEML TYG PD YTFN
Sbjct: 181 FQESIKVFKTMKEIGVSPSVVTFNSLLSIVLKRGRTSMAKQLFDEMLDTYGVTPDTYTFN 240
Query: 867 ILIRGFCMNSRMDDGFRFFKEMELFKCKPDLISYNTIVEGLCRAGKVKIAHNVVKGMCLK 688
ILIRGFCMNS +D+GF FFKEM FKC PD+++YNT+V+GLCRAGKVKIAHNVVKGM K
Sbjct: 241 ILIRGFCMNSMVDEGFWFFKEMSRFKCDPDVVTYNTLVDGLCRAGKVKIAHNVVKGMVKK 300
Query: 687 GENLKPNVVTYTTLVRGYCRNQEIDMMLDVLREMVDSGIKPNEITYNTIIQGLCEARMYD 508
NL PNVVTYTTL+RGYC Q++ L +L EMV G+KPN+ITYNT+IQGLCEA+ D
Sbjct: 301 SPNLSPNVVTYTTLIRGYCMKQDMAEALSLLAEMVSRGLKPNKITYNTLIQGLCEAQKLD 360
Query: 507 KIKDILEGCRGESGGFVPNTCTFNMVMNSHCNVGDLNEAFKVFEKMKELKVQQDSASYSL 328
KIK+ILEG G+ GGF+P+TCT N ++ +HC +G L EAF VFEKM EL+VQ DSA+YS+
Sbjct: 361 KIKEILEGMVGD-GGFIPDTCTLNTLIKAHCTMGKLEEAFSVFEKMSELRVQPDSATYSV 419
Query: 327 LIRGLCQKLEFGRAXXXXXXXXXXXXXLRDDGCTPLVAAYNPIFEYLCRNGKTKKAERVL 148
L+R LCQ+ +F RA L D GC PLVAAYNP+FEYLC NGKTKKAERV
Sbjct: 420 LVRSLCQRGDFRRAEEFFDELAEKEILLHDVGCKPLVAAYNPMFEYLCSNGKTKKAERVF 479
Query: 147 RQLMRRGKQDPPAYRTLILGHCKEGTCVAGHKILVLMLRRNFVPDLETY 1
RQLM+RG QDPP+Y+TLILGHC+EGT AG +LVLMLRR+FVPD ETY
Sbjct: 480 RQLMKRGTQDPPSYKTLILGHCREGTPEAGFDLLVLMLRRDFVPDAETY 528
>ref|XP_002266503.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
chloroplastic [Vitis vinifera]
gi|731390607|ref|XP_010650422.1| PREDICTED:
pentatricopeptide repeat-containing protein At1g02060,
chloroplastic [Vitis vinifera]
Length = 746
Score = 629 bits (1622), Expect = e-177
Identities = 310/469 (66%), Positives = 370/469 (78%), Gaps = 1/469 (0%)
Frame = -3
Query: 1404 TKSKKARTMARLINTKPWSAQLESSLSTHTP-LSETSVLQTLRLIKAPANALHFFNWTRN 1228
TK+K+++ MARLINT+PWS +L+SSL+ P LS+T+VLQTL+LI+ PA ALHFF W
Sbjct: 61 TKTKRSQAMARLINTEPWSHELQSSLAELAPSLSKTTVLQTLQLIRTPAKALHFFRWVEA 120
Query: 1227 TGFAHSEHSYFLMLENFGRARNLNSARNFLLSIPAKSNSAVPLTDKLFNSLIRSYGNAGL 1048
GF H+E SYFLM+E GR+RNLN+ARNF+ SI KS AV L D+ FNSLIRSYG AGL
Sbjct: 121 KGFTHNEQSYFLMIEILGRSRNLNAARNFVFSIEKKSGGAVKLGDRFFNSLIRSYGWAGL 180
Query: 1047 FKESIKVFKTMKSMGISPSTFTFNHLFFILLKRGRTGMVFELYDEMLRTYGAKPDLYTFN 868
F+ESIKVFKTMK +G+SPS TFN L I+LKRGRT M +L+DEML TYG PD YTFN
Sbjct: 181 FQESIKVFKTMKEIGVSPSVVTFNSLLSIVLKRGRTSMAKQLFDEMLDTYGVTPDTYTFN 240
Query: 867 ILIRGFCMNSRMDDGFRFFKEMELFKCKPDLISYNTIVEGLCRAGKVKIAHNVVKGMCLK 688
ILIRGFCMNS +D+GF FFKEM FKC PD+++YNT+V+GLCRAGKVKIAHNVVKGM K
Sbjct: 241 ILIRGFCMNSMVDEGFWFFKEMSRFKCDPDVVTYNTLVDGLCRAGKVKIAHNVVKGMVKK 300
Query: 687 GENLKPNVVTYTTLVRGYCRNQEIDMMLDVLREMVDSGIKPNEITYNTIIQGLCEARMYD 508
NL PNVVTYTTL+RGYC Q++ L +L EMV G+KPN+ITYNT+IQGLCEA+ D
Sbjct: 301 SPNLSPNVVTYTTLIRGYCMKQDMAEALSLLAEMVSRGLKPNKITYNTLIQGLCEAQKLD 360
Query: 507 KIKDILEGCRGESGGFVPNTCTFNMVMNSHCNVGDLNEAFKVFEKMKELKVQQDSASYSL 328
KIK+ILEG G+ GGF+P+TCT N ++ +HC +G L EAF VFEKM EL+VQ DSA+YS+
Sbjct: 361 KIKEILEGMVGD-GGFIPDTCTLNTLIKAHCTMGKLEEAFSVFEKMSELRVQPDSATYSV 419
Query: 327 LIRGLCQKLEFGRAXXXXXXXXXXXXXLRDDGCTPLVAAYNPIFEYLCRNGKTKKAERVL 148
L+R LCQ+ +F RA L D GC PLVAAYNP+FEYLC NGKTKKAERV
Sbjct: 420 LVRSLCQRGDFRRAEEFFDELAEKEILLHDVGCKPLVAAYNPMFEYLCSNGKTKKAERVF 479
Query: 147 RQLMRRGKQDPPAYRTLILGHCKEGTCVAGHKILVLMLRRNFVPDLETY 1
RQLM+RG QDPP+Y+TLILGHC+EGT AG +LVLMLRR+FVPD ETY
Sbjct: 480 RQLMKRGTQDPPSYKTLILGHCREGTPEAGFDLLVLMLRRDFVPDAETY 528
Score = 94.4 bits (233), Expect = 3e-16
Identities = 74/305 (24%), Positives = 134/305 (43%), Gaps = 5/305 (1%)
Frame = -3
Query: 1203 SYFLMLENFGRARNLNSARNFLLSIPAKSNSAVPLTDKLFNSLIRSYGNAGLFKESIKVF 1024
+Y +++ RA + A N + + KS + P + +LIR Y E++ +
Sbjct: 273 TYNTLVDGLCRAGKVKIAHNVVKGMVKKSPNLSPNV-VTYTTLIRGYCMKQDMAEALSLL 331
Query: 1023 KTMKSMGISPSTFTFNHLFFILLKRGRTGMVFELYDEMLRTYGAKPDLYTFNILIRGFCM 844
M S G+ P+ T+N L L + + + E+ + M+ G PD T N LI+ C
Sbjct: 332 AEMVSRGLKPNKITYNTLIQGLCEAQKLDKIKEILEGMVGDGGFIPDTCTLNTLIKAHCT 391
Query: 843 NSRMDDGFRFFKEMELFKCKPDLISYNTIVEGLCRAGKVKIAHNVV-----KGMCLKGEN 679
++++ F F++M + +PD +Y+ +V LC+ G + A K + L
Sbjct: 392 MGKLEEAFSVFEKMSELRVQPDSATYSVLVRSLCQRGDFRRAEEFFDELAEKEILLHDVG 451
Query: 678 LKPNVVTYTTLVRGYCRNQEIDMMLDVLREMVDSGIKPNEITYNTIIQGLCEARMYDKIK 499
KP V Y + C N + V R+++ G + + +Y T+I G C +
Sbjct: 452 CKPLVAAYNPMFEYLCSNGKTKKAERVFRQLMKRGTQ-DPPSYKTLILGHCREGTPEAGF 510
Query: 498 DILEGCRGESGGFVPNTCTFNMVMNSHCNVGDLNEAFKVFEKMKELKVQQDSASYSLLIR 319
D+L FVP+ T+ ++++ GD A K EKM + +A + ++
Sbjct: 511 DLLVLMLRRD--FVPDAETYGLMIDGLLKKGDPVLAHKSLEKMLKSSHLPTTAIFHSILA 568
Query: 318 GLCQK 304
L +K
Sbjct: 569 ALVEK 573
>ref|XP_002511627.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223548807|gb|EEF50296.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 1163
Score = 622 bits (1603), Expect = e-175
Identities = 307/483 (63%), Positives = 368/483 (76%), Gaps = 1/483 (0%)
Frame = -3
Query: 1446 NKSEDDIHIQNAKPTKSKKARTMARLINTKPWSAQLESSLSTHTP-LSETSVLQTLRLIK 1270
++ +D+ TK+KKA++MARLIN+KPWS +LESSLS+ +P +S+T+V + LRLIK
Sbjct: 38 DEERNDVVRPKRASTKTKKAKSMARLINSKPWSTELESSLSSLSPSISKTTVFEVLRLIK 97
Query: 1269 APANALHFFNWTRNTGFAHSEHSYFLMLENFGRARNLNSARNFLLSIPAKSNSAVPLTDK 1090
P+ AL FFNW GF H++ SYFLMLE GRARNLN ARNFL SI +SN V L D+
Sbjct: 98 TPSKALQFFNWAPELGFTHNDQSYFLMLEILGRARNLNVARNFLFSIKRRSNGTVKLEDR 157
Query: 1089 LFNSLIRSYGNAGLFKESIKVFKTMKSMGISPSTFTFNHLFFILLKRGRTGMVFELYDEM 910
FNSLIRSYG AGLF+ES++VF +MKS+G+SPS TFN L ILLKRGRT M ++DEM
Sbjct: 158 FFNSLIRSYGKAGLFQESVQVFNSMKSVGVSPSVVTFNSLLLILLKRGRTNMAQSVFDEM 217
Query: 909 LRTYGAKPDLYTFNILIRGFCMNSRMDDGFRFFKEMELFKCKPDLISYNTIVEGLCRAGK 730
L TYG PD YTFNILIRGFC NS +D+GFRFFKEM FKC PDL++YNT+V+GLCRAGK
Sbjct: 218 LSTYGVTPDTYTFNILIRGFCKNSMVDEGFRFFKEMSRFKCDPDLVTYNTLVDGLCRAGK 277
Query: 729 VKIAHNVVKGMCLKGENLKPNVVTYTTLVRGYCRNQEIDMMLDVLREMVDSGIKPNEITY 550
V IAHNVV GM K NL P+VVTYTTLVRGYC EID L V EMV G+KPNEITY
Sbjct: 278 VNIAHNVVNGMVKKSTNLNPDVVTYTTLVRGYCMKHEIDEALVVFEEMVSKGLKPNEITY 337
Query: 549 NTIIQGLCEARMYDKIKDILEGCRGESGGFVPNTCTFNMVMNSHCNVGDLNEAFKVFEKM 370
NT+I+GLCE + DKIK I EG G GGF+P+TCT N +MN+HCN G+LN+A +VFEKM
Sbjct: 338 NTLIKGLCEVQKIDKIKQIFEGALG-GGGFIPDTCTLNTLMNAHCNAGNLNDALEVFEKM 396
Query: 369 KELKVQQDSASYSLLIRGLCQKLEFGRAXXXXXXXXXXXXXLRDDGCTPLVAAYNPIFEY 190
L V+ DSA+YS+LIR LCQ+ F RA LRDDGCTPLVAAY +FE+
Sbjct: 397 MVLNVRPDSATYSVLIRNLCQRGNFERAEQLFDELSEKEILLRDDGCTPLVAAYKSMFEF 456
Query: 189 LCRNGKTKKAERVLRQLMRRGKQDPPAYRTLILGHCKEGTCVAGHKILVLMLRRNFVPDL 10
LCRNGKT KAERV RQLM+RG QDP +++ LI GHC+EGT AG+++LVLMLRR+FVPDL
Sbjct: 457 LCRNGKTAKAERVFRQLMKRGTQDPLSFKILIKGHCREGTFEAGYELLVLMLRRDFVPDL 516
Query: 9 ETY 1
ETY
Sbjct: 517 ETY 519
>ref|XP_010103831.1| hypothetical protein L484_024133 [Morus notabilis]
gi|587909359|gb|EXB97272.1| hypothetical protein
L484_024133 [Morus notabilis]
Length = 786
Score = 615 bits (1587), Expect = e-173
Identities = 307/525 (58%), Positives = 389/525 (74%), Gaps = 3/525 (0%)
Frame = -3
Query: 1566 IPLSKSTRPFSTSLF-PSNLTHLFSKQXXXXXXXXXXAVEPNKSEDDIHIQNAKPTKSKK 1390
I LS+ + F LF P+++ +S+Q E N++ED + +K+K+
Sbjct: 51 ISLSRKSAAFGKQLFTPTSVLRCYSRQRTNNSGENE---EKNQNEDVMEKPRPSSSKTKR 107
Query: 1389 ARTMARLINTKPWSAQLESSLST--HTPLSETSVLQTLRLIKAPANALHFFNWTRNTGFA 1216
A+ M+RLINT PWS LESSLS+ PLS+T+VLQTLRLI +P+ A FF W GF+
Sbjct: 108 AKEMSRLINTNPWSTDLESSLSSLFPFPLSKTTVLQTLRLITSPSKAFQFFKWVPQMGFS 167
Query: 1215 HSEHSYFLMLENFGRARNLNSARNFLLSIPAKSNSAVPLTDKLFNSLIRSYGNAGLFKES 1036
H++ S F+MLE GR+RNLN+ARNFL SI KSN +V L D+ FNSLIRSYGNAGLF+ES
Sbjct: 168 HNDQSCFMMLEILGRSRNLNAARNFLFSIEKKSNGSVKLEDRFFNSLIRSYGNAGLFQES 227
Query: 1035 IKVFKTMKSMGISPSTFTFNHLFFILLKRGRTGMVFELYDEMLRTYGAKPDLYTFNILIR 856
+K+F TMK + I+PS TFN L +LLKRGRT M ++DEML TYG +PD +TFN+LIR
Sbjct: 228 VKLFSTMKELAIAPSVVTFNSLLLVLLKRGRTNMARNVFDEMLGTYGVEPDTFTFNVLIR 287
Query: 855 GFCMNSRMDDGFRFFKEMELFKCKPDLISYNTIVEGLCRAGKVKIAHNVVKGMCLKGENL 676
GFCMNS +D+GF FFKEM FKC+PD+++YNT+V+GLCRAGKV IA NVVKGM K +L
Sbjct: 288 GFCMNSMVDEGFHFFKEMSRFKCEPDVVTYNTLVDGLCRAGKVDIARNVVKGMSKKSVDL 347
Query: 675 KPNVVTYTTLVRGYCRNQEIDMMLDVLREMVDSGIKPNEITYNTIIQGLCEARMYDKIKD 496
PN+VTYTTL++GYC QEID L VL+EM + G+KPN ITYNT+I+GLCEA+ D ++
Sbjct: 348 NPNIVTYTTLIKGYCGKQEIDEALLVLKEMTERGLKPNGITYNTLIKGLCEAQKLDDVRK 407
Query: 495 ILEGCRGESGGFVPNTCTFNMVMNSHCNVGDLNEAFKVFEKMKELKVQQDSASYSLLIRG 316
IL+G G FVPNTCTFN ++++HC G L+EA KVFEKM EL+V QDSA+YS LIR
Sbjct: 408 ILDGTM-RRGEFVPNTCTFNTLIHTHCQAGRLDEALKVFEKMLELQVLQDSATYSALIRS 466
Query: 315 LCQKLEFGRAXXXXXXXXXXXXXLRDDGCTPLVAAYNPIFEYLCRNGKTKKAERVLRQLM 136
LCQ+ ++ RA L DDGC P+VAAYNP+FE+LCRNGKTKKAERV RQLM
Sbjct: 467 LCQRGDYIRAEELFDKLSDKEILLSDDGCRPIVAAYNPMFEHLCRNGKTKKAERVFRQLM 526
Query: 135 RRGKQDPPAYRTLILGHCKEGTCVAGHKILVLMLRRNFVPDLETY 1
+RG QDPP+Y+TLI+GHC+EGT AG+++LVLMLRR+FVPD E Y
Sbjct: 527 KRGTQDPPSYKTLIMGHCREGTFEAGYELLVLMLRRDFVPDAEIY 571
Score = 87.0 bits (214), Expect = 4e-14
Identities = 82/344 (23%), Positives = 134/344 (38%), Gaps = 42/344 (12%)
Frame = -3
Query: 1251 HFFNWTRNTGFAHSEHSYFLMLENFGRARNLNSARNFLLSIPAKSNSAVPLTDKLFNSLI 1072
HFF +Y +++ RA ++ ARN + + KS P + +LI
Sbjct: 300 HFFKEMSRFKCEPDVVTYNTLVDGLCRAGKVDIARNVVKGMSKKSVDLNP-NIVTYTTLI 358
Query: 1071 RSYGNAGLFKESIKVFKTMKSMGISPSTFTFNHLFFILLKRGRTGMVFELYDEMLRTYGA 892
+ Y E++ V K M G+ P+ T+N L L + + V ++ D +R
Sbjct: 359 KGYCGKQEIDEALLVLKEMTERGLKPNGITYNTLIKGLCEAQKLDDVRKILDGTMRRGEF 418
Query: 891 KPDLYTFNILIRGFCMNSRMDDGFRFFKEM-----------------------------E 799
P+ TFN LI C R+D+ + F++M E
Sbjct: 419 VPNTCTFNTLIHTHCQAGRLDEALKVFEKMLELQVLQDSATYSALIRSLCQRGDYIRAEE 478
Query: 798 LFK-------------CKPDLISYNTIVEGLCRAGKVKIAHNVVKGMCLKGENLKPNVVT 658
LF C+P + +YN + E LCR GK K A V + + +G P+
Sbjct: 479 LFDKLSDKEILLSDDGCRPIVAAYNPMFEHLCRNGKTKKAERVFRQLMKRGTQDPPS--- 535
Query: 657 YTTLVRGYCRNQEIDMMLDVLREMVDSGIKPNEITYNTIIQGLCEARMYDKIKDILEGCR 478
Y TL+ G+CR + ++L M+ P+ Y ++I GL + K LE
Sbjct: 536 YKTLIMGHCREGTFEAGYELLVLMLRRDFVPDAEIYESLITGLLQKDKPLLAKTTLEKML 595
Query: 477 GESGGFVPNTCTFNMVMNSHCNVGDLNEAFKVFEKMKELKVQQD 346
S +P F+ ++ G E+ M E K +Q+
Sbjct: 596 RSS--HLPRASAFHCILEELLKKGCAKESASFATLMLEQKFRQN 637
>gb|EYU20150.1| hypothetical protein MIMGU_mgv1a002588mg [Erythranthe guttata]
Length = 656
Score = 610 bits (1573), Expect = e-171
Identities = 298/465 (64%), Positives = 359/465 (77%), Gaps = 1/465 (0%)
Frame = -3
Query: 1392 KARTMARLINTKPWSAQLESSLSTH-TPLSETSVLQTLRLIKAPANALHFFNWTRNTGFA 1216
KA A+LINTKPW+A LES LST TPLS+T+ QTLR IK P+NAL FFNW +++GF
Sbjct: 3 KAIAAAKLINTKPWAAPLESRLSTALTPLSQTAFFQTLRRIKTPSNALRFFNWAQSSGFT 62
Query: 1215 HSEHSYFLMLENFGRARNLNSARNFLLSIPAKSNSAVPLTDKLFNSLIRSYGNAGLFKES 1036
H+ HSYF+ML+ GRAR+LN ARNFL SIP KSN+ VPLTDK FNSLIRSYG+AGL++ES
Sbjct: 63 HNHHSYFIMLQILGRARHLNPARNFLFSIPKKSNNTVPLTDKFFNSLIRSYGDAGLYQES 122
Query: 1035 IKVFKTMKSMGISPSTFTFNHLFFILLKRGRTGMVFELYDEMLRTYGAKPDLYTFNILIR 856
+K+F+ MKSM +SPST TFN LF ILLKRGR GMVFELY+EML+TYGAKPD YTFN+LIR
Sbjct: 123 LKIFQVMKSMAVSPSTVTFNSLFSILLKRGRMGMVFELYNEMLKTYGAKPDSYTFNVLIR 182
Query: 855 GFCMNSRMDDGFRFFKEMELFKCKPDLISYNTIVEGLCRAGKVKIAHNVVKGMCLKGENL 676
G CMNS +D+ FR FKEME F CKPDLI+YNTIV+GLCR GKV IA NVV G+ E+L
Sbjct: 183 GLCMNSSVDEAFRMFKEMEKFDCKPDLITYNTIVDGLCRTGKVSIARNVVTGLFKTCEDL 242
Query: 675 KPNVVTYTTLVRGYCRNQEIDMMLDVLREMVDSGIKPNEITYNTIIQGLCEARMYDKIKD 496
+PNVVTYTTL+RGYC +EI+ DV REM+ GI PNEIT NT+IQGLCE+R +D IK+
Sbjct: 243 RPNVVTYTTLIRGYCGKREIEEAFDVFREMIGGGITPNEITCNTLIQGLCESRKFDMIKE 302
Query: 495 ILEGCRGESGGFVPNTCTFNMVMNSHCNVGDLNEAFKVFEKMKELKVQQDSASYSLLIRG 316
+L C G VP+TCTFN +MN+HCN G+L EA FEKMKE+ V++DSA+YS++IR
Sbjct: 303 VLREC---GGTIVPDTCTFNTMMNAHCNSGNLEEALIFFEKMKEMNVKRDSATYSVIIRA 359
Query: 315 LCQKLEFGRAXXXXXXXXXXXXXLRDDGCTPLVAAYNPIFEYLCRNGKTKKAERVLRQLM 136
LC+K F +A LR D CTP++AAYNPIF YLC NGKTKKAERV RQLM
Sbjct: 360 LCEKGSFEKAEELLDELFGEEILLRGDNCTPIIAAYNPIFNYLCTNGKTKKAERVFRQLM 419
Query: 135 RRGKQDPPAYRTLILGHCKEGTCVAGHKILVLMLRRNFVPDLETY 1
+RG DP A+ TLI G CKEG H +L+LMLRR+F+P ++ Y
Sbjct: 420 KRGTHDPIAFETLIFGQCKEGNFQDAHNLLILMLRRDFLPSVKIY 464
>ref|XP_011042452.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
chloroplastic [Populus euphratica]
Length = 1216
Score = 609 bits (1570), Expect = e-171
Identities = 296/479 (61%), Positives = 365/479 (76%), Gaps = 1/479 (0%)
Frame = -3
Query: 1434 DDIHIQNAKPTKSKKARTMARLINTKPWSAQLESSLSTHTP-LSETSVLQTLRLIKAPAN 1258
D+++ KSK A++MARLIN+KPWS +LESSL + +P +S+T+ Q LR I +P+
Sbjct: 47 DNVNEPRKSSNKSKTAKSMARLINSKPWSTELESSLFSLSPSISKTTFFQVLRFIASPSK 106
Query: 1257 ALHFFNWTRNTGFAHSEHSYFLMLENFGRARNLNSARNFLLSIPAKSNSAVPLTDKLFNS 1078
A FFNW GF H SYF+MLE GR NLN ARNFL SI +SN +V + D+ N+
Sbjct: 107 AFEFFNWASRNGFTHDSRSYFMMLEILGRNGNLNIARNFLFSIERRSNGSVKIEDRFCNT 166
Query: 1077 LIRSYGNAGLFKESIKVFKTMKSMGISPSTFTFNHLFFILLKRGRTGMVFELYDEMLRTY 898
L+RSYGNAGLF E+IK+F MKS G+SPS TFN L ILLKRGRT M ++DEM TY
Sbjct: 167 LLRSYGNAGLFNEAIKLFSLMKSSGVSPSVITFNSLLLILLKRGRTNMAHSVFDEMCGTY 226
Query: 897 GAKPDLYTFNILIRGFCMNSRMDDGFRFFKEMELFKCKPDLISYNTIVEGLCRAGKVKIA 718
G PD YTFNILIRGFC NS +D+GFRFFKEM F C+PD+++YNT+V+GLCRAGKV+IA
Sbjct: 227 GVTPDTYTFNILIRGFCKNSMVDEGFRFFKEMSRFNCEPDVVTYNTLVDGLCRAGKVRIA 286
Query: 717 HNVVKGMCLKGENLKPNVVTYTTLVRGYCRNQEIDMMLDVLREMVDSGIKPNEITYNTII 538
HNVVKGM K ++L P+VVTYTTLVRGYC QEID L V EMV G+KPN+ITYNT+I
Sbjct: 287 HNVVKGMVKKMKDLSPDVVTYTTLVRGYCMKQEIDEALVVFEEMVSRGLKPNDITYNTLI 346
Query: 537 QGLCEARMYDKIKDILEGCRGESGGFVPNTCTFNMVMNSHCNVGDLNEAFKVFEKMKELK 358
+GLCE + +DKIK+IL G G GFVP+TCT+N +MNS C+ G+ +EA K+F+KMKELK
Sbjct: 347 KGLCEVQKFDKIKEILGGAVG-GRGFVPDTCTYNTLMNSQCDAGNFDEALKMFKKMKELK 405
Query: 357 VQQDSASYSLLIRGLCQKLEFGRAXXXXXXXXXXXXXLRDDGCTPLVAAYNPIFEYLCRN 178
VQ DSA+YS+LIR LCQ+ +F RA LRDDGCTPLVAAYNPIF++LC+N
Sbjct: 406 VQPDSATYSVLIRNLCQRGDFERAEQLFDELSDDDILLRDDGCTPLVAAYNPIFDFLCKN 465
Query: 177 GKTKKAERVLRQLMRRGKQDPPAYRTLILGHCKEGTCVAGHKILVLMLRRNFVPDLETY 1
GKT KAERV RQLM++G QDPP+Y+TLILGHCKEGT AG+K+L+ MLRR++VPD ETY
Sbjct: 466 GKTSKAERVFRQLMKKGTQDPPSYKTLILGHCKEGTFEAGYKLLLYMLRRDYVPDFETY 524
Score = 89.4 bits (220), Expect = 8e-15
Identities = 88/409 (21%), Positives = 168/409 (41%), Gaps = 34/409 (8%)
Frame = -3
Query: 1203 SYFLMLENFGRARNLNSARNFLLSIPAKSNSAVPLTDKLFNSLIRSYGNAGLFKESIKVF 1024
+Y +++ RA + A N + + K P + +L+R Y E++ VF
Sbjct: 269 TYNTLVDGLCRAGKVRIAHNVVKGMVKKMKDLSPDV-VTYTTLVRGYCMKQEIDEALVVF 327
Query: 1023 KTMKSMGISPSTFTFNHLFFILLKRGRTGMVFELYDEMLRTYGAKPDLYTFNILIRGFCM 844
+ M S G+ P+ T+N L L + + + E+ + G PD T+N L+ C
Sbjct: 328 EEMVSRGLKPNDITYNTLIKGLCEVQKFDKIKEILGGAVGGRGFVPDTCTYNTLMNSQCD 387
Query: 843 NSRMDDGFRFFKEMELFKCKPDLISYNTIVEGLCRAGKVKIAHNVVKGMC-----LKGEN 679
D+ + FK+M+ K +PD +Y+ ++ LC+ G + A + + L+ +
Sbjct: 388 AGNFDEALKMFKKMKELKVQPDSATYSVLIRNLCQRGDFERAEQLFDELSDDDILLRDDG 447
Query: 678 LKPNVVTYTTLVRGYCRNQEIDMMLDVLREMVDSGIKPNEITYNTIIQGLCEARMYDK-I 502
P V Y + C+N + V R+++ G + + +Y T+I G C+ ++
Sbjct: 448 CTPLVAAYNPIFDFLCKNGKTSKAERVFRQLMKKGTQ-DPPSYKTLILGHCKEGTFEAGY 506
Query: 501 KDILEGCRGESGGFVPNTCTFNMVMNSHCNVGDLNEAFKVFEKM-KELKVQQDSASYSLL 325
K +L R + +VP+ T+ +++N G+ A+K E+M K + + S +S+L
Sbjct: 507 KLLLYMLRRD---YVPDFETYVLLINGFLQKGEPILAYKTLERMLKSSYLPKTSVFHSIL 563
Query: 324 IRGLCQKLEFGRAXXXXXXXXXXXXXLRDDGCTP-------------------------- 223
L K +F R ++ +
Sbjct: 564 SELL--KHDFARESASFVVLMIDRKIRQNINLSTHTMRLLFGSGLRNKAFQIVELLYDNG 621
Query: 222 LVAAYNPIFEYLCRNGKTKKAERVLRQLMRRGKQ-DPPAYRTLILGHCK 79
V + ++C+NGK A+++L + +G D +I G CK
Sbjct: 622 YVVDMEELIGFICQNGKLLDAQKMLSFCLEKGHTVDINVCNVVIEGLCK 670
>gb|KHF97527.1| hypothetical protein F383_12018 [Gossypium arboreum]
Length = 741
Score = 607 bits (1565), Expect = e-171
Identities = 299/483 (61%), Positives = 373/483 (77%), Gaps = 1/483 (0%)
Frame = -3
Query: 1446 NKSEDDIHIQNAKPTKSKKARTMARLINTKPWSAQLESSLSTHTP-LSETSVLQTLRLIK 1270
N+ + + TK+K A+ MAR+IN+ PWS++LESS+S+ +P LS+T+VLQTLRLIK
Sbjct: 42 NEGNQGLDEKAESSTKTKGAKFMARVINSTPWSSELESSISSLSPSLSKTTVLQTLRLIK 101
Query: 1269 APANALHFFNWTRNTGFAHSEHSYFLMLENFGRARNLNSARNFLLSIPAKSNSAVPLTDK 1090
P+ AL FFNW + GF H S+FLM+E G+ RNL +ARN LSI +SN +V L DK
Sbjct: 102 NPSKALQFFNWVQQMGFPHDAQSFFLMIEILGKERNLYAARNLTLSIEKRSNGSVKLEDK 161
Query: 1089 LFNSLIRSYGNAGLFKESIKVFKTMKSMGISPSTFTFNHLFFILLKRGRTGMVFELYDEM 910
FNSLIRSYG AGLF+ESIKVF+TMKS+G+SPS +FN+L ILLKRGRT M ++DEM
Sbjct: 162 FFNSLIRSYGKAGLFQESIKVFETMKSIGVSPSVISFNNLLSILLKRGRTNMAKSVFDEM 221
Query: 909 LRTYGAKPDLYTFNILIRGFCMNSRMDDGFRFFKEMELFKCKPDLISYNTIVEGLCRAGK 730
L TYG PD+YTFNILI+GF MNS +D+GFRFFKEME FKC PD+++YNTIV+GLCR GK
Sbjct: 222 LSTYGVTPDVYTFNILIKGFGMNSMVDEGFRFFKEMERFKCDPDVVTYNTIVDGLCRVGK 281
Query: 729 VKIAHNVVKGMCLKGENLKPNVVTYTTLVRGYCRNQEIDMMLDVLREMVDSGIKPNEITY 550
V+IAHNVVKGM K +L PNVVTYTTLVRGYC Q+ID L V +EM+ G+KPN+ITY
Sbjct: 282 VRIAHNVVKGMSKKSLDLNPNVVTYTTLVRGYCMKQDIDEALAVFQEMICRGLKPNKITY 341
Query: 549 NTIIQGLCEARMYDKIKDILEGCRGESGGFVPNTCTFNMVMNSHCNVGDLNEAFKVFEKM 370
NT+I+GL E YDKIK+ILEG R + G F P+TCTFN ++N+HCN G+++EA VF++M
Sbjct: 342 NTLIKGLSEVHKYDKIKEILEGMR-KDGRFTPDTCTFNTLINAHCNAGNMDEALNVFKRM 400
Query: 369 KELKVQQDSASYSLLIRGLCQKLEFGRAXXXXXXXXXXXXXLRDDGCTPLVAAYNPIFEY 190
E+KVQ DSA+YS++IR LCQ +F +A L GCTP+VAAYNP+FEY
Sbjct: 401 SEMKVQSDSATYSVIIRSLCQIADFEKAEEFFDELAKKEILLGHVGCTPVVAAYNPMFEY 460
Query: 189 LCRNGKTKKAERVLRQLMRRGKQDPPAYRTLILGHCKEGTCVAGHKILVLMLRRNFVPDL 10
LC NGKTKKAERV RQL++RG+QDPPAY+TLILGHCKEGT AG+++LVLMLRR+F P
Sbjct: 461 LCANGKTKKAERVFRQLLKRGRQDPPAYKTLILGHCKEGTFEAGYELLVLMLRRDFEPGF 520
Query: 9 ETY 1
E Y
Sbjct: 521 EIY 523
Score = 73.2 bits (178), Expect = 6e-10
Identities = 62/267 (23%), Positives = 102/267 (38%), Gaps = 42/267 (15%)
Frame = -3
Query: 1203 SYFLMLENFGRARNLNSARNFLLSIPAKSNSAVPLTDKLFNSLIRSYGNAGLFKESIKVF 1024
+Y +++ R + A N + + KS P + +L+R Y E++ VF
Sbjct: 268 TYNTIVDGLCRVGKVRIAHNVVKGMSKKSLDLNPNV-VTYTTLVRGYCMKQDIDEALAVF 326
Query: 1023 KTMKSMGISPSTFTFNHLFFILLKRGRTGMVFELYDEMLRTYGAKPDLYTFNILIRGFCM 844
+ M G+ P+ T+N L L + + + E+ + M + PD TFN LI C
Sbjct: 327 QEMICRGLKPNKITYNTLIKGLSEVHKYDKIKEILEGMRKDGRFTPDTCTFNTLINAHCN 386
Query: 843 NSRMDDGFRFFKEMELFK------------------------------------------ 790
MD+ FK M K
Sbjct: 387 AGNMDEALNVFKRMSEMKVQSDSATYSVIIRSLCQIADFEKAEEFFDELAKKEILLGHVG 446
Query: 789 CKPDLISYNTIVEGLCRAGKVKIAHNVVKGMCLKGENLKPNVVTYTTLVRGYCRNQEIDM 610
C P + +YN + E LC GK K A V + + +G P Y TL+ G+C+ +
Sbjct: 447 CTPVVAAYNPMFEYLCANGKTKKAERVFRQLLKRGRQDPP---AYKTLILGHCKEGTFEA 503
Query: 609 MLDVLREMVDSGIKPNEITYNTIIQGL 529
++L M+ +P Y+++I GL
Sbjct: 504 GYELLVLMLRRDFEPGFEIYDSLITGL 530
>ref|XP_006375239.1| hypothetical protein POPTR_0014s05550g [Populus trichocarpa]
gi|550323558|gb|ERP53036.1| hypothetical protein
POPTR_0014s05550g [Populus trichocarpa]
Length = 728
Score = 606 bits (1562), Expect = e-170
Identities = 294/479 (61%), Positives = 364/479 (75%), Gaps = 1/479 (0%)
Frame = -3
Query: 1434 DDIHIQNAKPTKSKKARTMARLINTKPWSAQLESSLSTHTP-LSETSVLQTLRLIKAPAN 1258
D++ KSK A++MARLIN+KPWS +LESSL + +P +S+T+ Q LR I +P
Sbjct: 47 DNVKEPRKSSNKSKTAKSMARLINSKPWSTELESSLFSLSPSISKTTFFQVLRFIASPPK 106
Query: 1257 ALHFFNWTRNTGFAHSEHSYFLMLENFGRARNLNSARNFLLSIPAKSNSAVPLTDKLFNS 1078
A FFNW GFAH SYF+ML+ GR NLN ARNFL SI +SN +V + D+ N+
Sbjct: 107 AFEFFNWASRNGFAHDSRSYFMMLDILGRNGNLNIARNFLFSIERRSNGSVKIEDRFCNT 166
Query: 1077 LIRSYGNAGLFKESIKVFKTMKSMGISPSTFTFNHLFFILLKRGRTGMVFELYDEMLRTY 898
L+RSYGNAGLF E+IK+F MKS G+SPS TFN L ILLKRGRT M ++DEM TY
Sbjct: 167 LLRSYGNAGLFNEAIKLFSLMKSSGVSPSVITFNSLLLILLKRGRTNMAHSVFDEMCGTY 226
Query: 897 GAKPDLYTFNILIRGFCMNSRMDDGFRFFKEMELFKCKPDLISYNTIVEGLCRAGKVKIA 718
G PD YTFNILIRGFC NS +D+GFRFFKEM F C+PD+++YNT+V+GLCRAGKV+IA
Sbjct: 227 GVTPDTYTFNILIRGFCKNSMVDEGFRFFKEMSRFNCEPDVVTYNTLVDGLCRAGKVRIA 286
Query: 717 HNVVKGMCLKGENLKPNVVTYTTLVRGYCRNQEIDMMLDVLREMVDSGIKPNEITYNTII 538
HNVVKGM K ++L P+VVTYTTLVRGYC QEID L V EMV G+KPN+ITYNT+I
Sbjct: 287 HNVVKGMVKKMKDLSPDVVTYTTLVRGYCMKQEIDEALVVFEEMVSRGLKPNDITYNTLI 346
Query: 537 QGLCEARMYDKIKDILEGCRGESGGFVPNTCTFNMVMNSHCNVGDLNEAFKVFEKMKELK 358
+GLCE + +DKIK+IL G G GFVP+TCT+N +MN+ C+ G+ +EA K+F+KMKELK
Sbjct: 347 KGLCEVQKFDKIKEILGGAVG-GRGFVPDTCTYNTLMNAQCDAGNFDEALKMFKKMKELK 405
Query: 357 VQQDSASYSLLIRGLCQKLEFGRAXXXXXXXXXXXXXLRDDGCTPLVAAYNPIFEYLCRN 178
VQ DSA+YS+LIR LCQ+ +F RA LRDDGCTPLVAAYNPIF++LC+N
Sbjct: 406 VQPDSATYSVLIRNLCQRGDFERAEQLFDKLSDEDILLRDDGCTPLVAAYNPIFDFLCKN 465
Query: 177 GKTKKAERVLRQLMRRGKQDPPAYRTLILGHCKEGTCVAGHKILVLMLRRNFVPDLETY 1
GKT KAERV RQLM++G QDPP+Y+TLI+GHCKEGT AG+K+L+ MLRR++VPD ETY
Sbjct: 466 GKTHKAERVFRQLMKKGTQDPPSYKTLIIGHCKEGTFEAGYKLLLFMLRRDYVPDFETY 524
Score = 88.2 bits (217), Expect = 2e-14
Identities = 87/409 (21%), Positives = 169/409 (41%), Gaps = 34/409 (8%)
Frame = -3
Query: 1203 SYFLMLENFGRARNLNSARNFLLSIPAKSNSAVPLTDKLFNSLIRSYGNAGLFKESIKVF 1024
+Y +++ RA + A N + + K P + +L+R Y E++ VF
Sbjct: 269 TYNTLVDGLCRAGKVRIAHNVVKGMVKKMKDLSPDV-VTYTTLVRGYCMKQEIDEALVVF 327
Query: 1023 KTMKSMGISPSTFTFNHLFFILLKRGRTGMVFELYDEMLRTYGAKPDLYTFNILIRGFCM 844
+ M S G+ P+ T+N L L + + + E+ + G PD T+N L+ C
Sbjct: 328 EEMVSRGLKPNDITYNTLIKGLCEVQKFDKIKEILGGAVGGRGFVPDTCTYNTLMNAQCD 387
Query: 843 NSRMDDGFRFFKEMELFKCKPDLISYNTIVEGLCRAGKVKIAHNVV-----KGMCLKGEN 679
D+ + FK+M+ K +PD +Y+ ++ LC+ G + A + + + L+ +
Sbjct: 388 AGNFDEALKMFKKMKELKVQPDSATYSVLIRNLCQRGDFERAEQLFDKLSDEDILLRDDG 447
Query: 678 LKPNVVTYTTLVRGYCRNQEIDMMLDVLREMVDSGIKPNEITYNTIIQGLCEARMYDK-I 502
P V Y + C+N + V R+++ G + + +Y T+I G C+ ++
Sbjct: 448 CTPLVAAYNPIFDFLCKNGKTHKAERVFRQLMKKGTQ-DPPSYKTLIIGHCKEGTFEAGY 506
Query: 501 KDILEGCRGESGGFVPNTCTFNMVMNSHCNVGDLNEAFKVFEKM-KELKVQQDSASYSLL 325
K +L R + +VP+ T+ +++N G+ A+K E+M K + + S +S+L
Sbjct: 507 KLLLFMLRRD---YVPDFETYVLLINGFLQKGEPILAYKTLERMLKSSYLPKTSVFHSIL 563
Query: 324 IRGLCQKLEFGRAXXXXXXXXXXXXXLRDDGCTP-------------------------- 223
L K +F R ++ +
Sbjct: 564 SELL--KNDFARESASFVVLMIDRKIRQNINLSTHTMRLLFGSGLRIKAFQIVELLYDNG 621
Query: 222 LVAAYNPIFEYLCRNGKTKKAERVLRQLMRRGKQ-DPPAYRTLILGHCK 79
+ + ++C+NGK A+++L + +G D +I G CK
Sbjct: 622 YMVDMEELIGFICQNGKLLDAQKMLSFCLEKGHNVDINVCNVVIEGLCK 670
>ref|XP_012083857.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
chloroplastic [Jatropha curcas]
Length = 1162
Score = 605 bits (1561), Expect = e-170
Identities = 300/480 (62%), Positives = 363/480 (75%), Gaps = 1/480 (0%)
Frame = -3
Query: 1437 EDDIHIQNAKPTKSKKARTMARLINTKPWSAQLESSLSTHTP-LSETSVLQTLRLIKAPA 1261
E + +++ TK+KKA+++ARLINTK WS++LESSLS+ +P S+T+ Q LRLIK P+
Sbjct: 45 ELEANVERRLSTKTKKAKSIARLINTKSWSSELESSLSSLSPSFSKTTGFQVLRLIKVPS 104
Query: 1260 NALHFFNWTRNTGFAHSEHSYFLMLENFGRARNLNSARNFLLSIPAKSNSAVPLTDKLFN 1081
AL FFNW GF H++ SYFLMLE GRARNLN ARNFL SI KSN V L D+ FN
Sbjct: 105 KALKFFNWLPQMGFTHNDQSYFLMLEILGRARNLNVARNFLFSIKRKSNGTVKLEDRFFN 164
Query: 1080 SLIRSYGNAGLFKESIKVFKTMKSMGISPSTFTFNHLFFILLKRGRTGMVFELYDEMLRT 901
SLIRSYG AGLF+ES+K+F +MKS+G+SPS TFN L ILLKRGRT M ++DEML T
Sbjct: 165 SLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLST 224
Query: 900 YGAKPDLYTFNILIRGFCMNSRMDDGFRFFKEMELFKCKPDLISYNTIVEGLCRAGKVKI 721
YG PD YTFNILIRGFC NS +DDGFRFF++M F C PD+++YNT+V+GLCRAGKVK
Sbjct: 225 YGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGLCRAGKVKT 284
Query: 720 AHNVVKGMCLKGENLKPNVVTYTTLVRGYCRNQEIDMMLDVLREMVDSGIKPNEITYNTI 541
AHNVVKGM K E+L P+VV+YTTL+RGYC Q ID L V EMVD G+KPN +TYNT+
Sbjct: 285 AHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTL 344
Query: 540 IQGLCEARMYDKIKDILEGCRGESGGFVPNTCTFNMVMNSHCNVGDLNEAFKVFEKMKEL 361
I+GLCE + DKIK++LEG E GGF P+TCT N +MN HCN G+LNEA KVFEKM E
Sbjct: 345 IKGLCEVQKIDKIKEVLEGAL-EVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEW 403
Query: 360 KVQQDSASYSLLIRGLCQKLEFGRAXXXXXXXXXXXXXLRDDGCTPLVAAYNPIFEYLCR 181
KVQ DSA+YS+L+R LC +F RA LRDDG TPLVAAY +F++LC+
Sbjct: 404 KVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCK 463
Query: 180 NGKTKKAERVLRQLMRRGKQDPPAYRTLILGHCKEGTCVAGHKILVLMLRRNFVPDLETY 1
NGKT KAER RQLM+RG QDP +Y+ LI+GHCKEGT AG+++LVLMLRRNF PD E Y
Sbjct: 464 NGKTSKAERGFRQLMKRGTQDPTSYKILIIGHCKEGTFEAGYELLVLMLRRNFDPDSEIY 523
Score = 87.0 bits (214), Expect = 4e-14
Identities = 71/324 (21%), Positives = 137/324 (42%), Gaps = 38/324 (11%)
Frame = -3
Query: 1203 SYFLMLENFGRARNLNSARNFLLSIPAKSNSAVPLTDKLFNSLIRSYGNAGLFKESIKVF 1024
+Y +++ RA + +A N + + KS P + +L+R Y E++ VF
Sbjct: 268 TYNTLVDGLCRAGKVKTAHNVVKGMVKKSEDLNPDVVS-YTTLLRGYCMKQNIDEALVVF 326
Query: 1023 KTMKSMGISPSTFTFNHLFFILLKRGRTGMVFELYDEMLRTYGAKPDLYTFNILIRGFCM 844
+ M G+ P+ T+N L L + + + E+ + L G PD T N L+ G C
Sbjct: 327 EEMVDKGLKPNAVTYNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCN 386
Query: 843 NSRMDDGFRFFKEMELFKCKPDLISYNTIVEGLCRAGKVKIAHNVV-----KGMCLKGEN 679
+++ + F++M +K +PD +Y+ +V LC G + A + KG+ L+ +
Sbjct: 387 AGNLNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDG 446
Query: 678 LKPNVVTYTTLVRGYCRNQEIDMMLDVLREMVDSGIKPNEITYNTIIQGLCEA------- 520
P V Y ++ + C+N + R+++ G + + +Y +I G C+
Sbjct: 447 STPLVAAYKSMFQFLCKNGKTSKAERGFRQLMKRGTQ-DPTSYKILIIGHCKEGTFEAGY 505
Query: 519 --------RMYDKIKDILEGC------RGE------------SGGFVPNTCTFNMVMNSH 418
R +D +I + +GE VP T TF+ ++
Sbjct: 506 ELLVLMLRRNFDPDSEIYQSLIDGLLQKGEPLLAYQTLQKMLKSSIVPTTSTFHSILAGL 565
Query: 417 CNVGDLNEAFKVFEKMKELKVQQD 346
G +E+ + + E K++Q+
Sbjct: 566 LKKGYAHESASLVVLLLEGKIRQN 589
>ref|XP_007052225.1| Tetratricopeptide repeat (TPR)-like superfamily protein, putative
[Theobroma cacao] gi|508704486|gb|EOX96382.1|
Tetratricopeptide repeat (TPR)-like superfamily protein,
putative [Theobroma cacao]
Length = 724
Score = 603 bits (1555), Expect = e-169
Identities = 297/469 (63%), Positives = 369/469 (78%), Gaps = 1/469 (0%)
Frame = -3
Query: 1404 TKSKKARTMARLINTKPWSAQLESSLSTHTP-LSETSVLQTLRLIKAPANALHFFNWTRN 1228
TK+K+A++MAR+IN+ PWS++LESSLS+ +P LS+T+VLQTLRLIKAP+ AL FF+W +
Sbjct: 56 TKTKRAKSMARVINSTPWSSELESSLSSLSPSLSKTTVLQTLRLIKAPSKALQFFDWVQK 115
Query: 1227 TGFAHSEHSYFLMLENFGRARNLNSARNFLLSIPAKSNSAVPLTDKLFNSLIRSYGNAGL 1048
GF H+ S+FL+LE G+ RNLN+ARN LLSI +SN +V L D+ FNSLIRSYG AGL
Sbjct: 116 MGFPHNAQSFFLILEILGKERNLNAARNLLLSIEKRSNGSVKLEDQFFNSLIRSYGKAGL 175
Query: 1047 FKESIKVFKTMKSMGISPSTFTFNHLFFILLKRGRTGMVFELYDEMLRTYGAKPDLYTFN 868
F+ESIKVF+TMK +G+SPS +FN+L ILLKRGRT M ++DEML TYG PD+YTFN
Sbjct: 176 FQESIKVFETMKGIGVSPSVVSFNNLLMILLKRGRTNMAKSVFDEMLSTYGVSPDVYTFN 235
Query: 867 ILIRGFCMNSRMDDGFRFFKEMELFKCKPDLISYNTIVEGLCRAGKVKIAHNVVKGMCLK 688
ILIRGFCMNS +D+GFRFFKEME FKC PD+++YNTIV+GLCRAGKV IA NVV+GM K
Sbjct: 236 ILIRGFCMNSMVDEGFRFFKEMERFKCDPDVVTYNTIVDGLCRAGKVGIARNVVRGMSKK 295
Query: 687 GENLKPNVVTYTTLVRGYCRNQEIDMMLDVLREMVDSGIKPNEITYNTIIQGLCEARMYD 508
+L PNVVTYTTLVRGYC QEID L V +EM+ ++PN ITYNT+I+GL E Y+
Sbjct: 296 SLDLNPNVVTYTTLVRGYCMKQEIDEALVVFKEMISRRLRPNRITYNTLIKGLSEVHEYE 355
Query: 507 KIKDILEGCRGESGGFVPNTCTFNMVMNSHCNVGDLNEAFKVFEKMKELKVQQDSASYSL 328
KIK+ILEG GE G FVP+TCT N ++N+HCN +++EA VF++M EL V DSA+YS+
Sbjct: 356 KIKEILEG-MGEDGRFVPDTCTLNTLINAHCNAENMDEALNVFKRMSELNVLPDSATYSV 414
Query: 327 LIRGLCQKLEFGRAXXXXXXXXXXXXXLRDDGCTPLVAAYNPIFEYLCRNGKTKKAERVL 148
+IR LCQ+ +F +A L D GCTPLVAAYNP+FEYLC NGKTKKAE V
Sbjct: 415 IIRSLCQRGDFEKAEEFFDELAEKEILLSDVGCTPLVAAYNPMFEYLCGNGKTKKAEIVF 474
Query: 147 RQLMRRGKQDPPAYRTLILGHCKEGTCVAGHKILVLMLRRNFVPDLETY 1
RQLM+RG+QDPPAY+TLILGHC+EGT G+++LVLMLRR+F P E Y
Sbjct: 475 RQLMKRGRQDPPAYKTLILGHCREGTFKDGYELLVLMLRRDFEPGFEIY 523
>gb|KJB24854.1| hypothetical protein B456_004G164900 [Gossypium raimondii]
Length = 1615
Score = 603 bits (1554), Expect = e-169
Identities = 296/468 (63%), Positives = 367/468 (78%), Gaps = 1/468 (0%)
Frame = -3
Query: 1401 KSKKARTMARLINTKPWSAQLESSLSTHTP-LSETSVLQTLRLIKAPANALHFFNWTRNT 1225
K+K A+ MAR+IN+ PWS++LESS+S+ +P LS+T+VLQTLRLIK P+ AL FFNW +
Sbjct: 931 KTKGAKFMARVINSTPWSSELESSISSLSPSLSKTTVLQTLRLIKNPSKALQFFNWVQQM 990
Query: 1224 GFAHSEHSYFLMLENFGRARNLNSARNFLLSIPAKSNSAVPLTDKLFNSLIRSYGNAGLF 1045
GF H S+FLM+E G+ RNLN+ARN +LSI +SN +V L DK FNSLIRSYG AGLF
Sbjct: 991 GFPHDAQSFFLMIEILGKERNLNAARNLMLSIEKRSNGSVKLEDKFFNSLIRSYGKAGLF 1050
Query: 1044 KESIKVFKTMKSMGISPSTFTFNHLFFILLKRGRTGMVFELYDEMLRTYGAKPDLYTFNI 865
+ESIKVF+TMKS+G+SPS +FN+L ILLKRGRT M +++EML TYG PD+YTFNI
Sbjct: 1051 QESIKVFETMKSIGVSPSVVSFNNLLSILLKRGRTNMAKSVFNEMLSTYGVTPDVYTFNI 1110
Query: 864 LIRGFCMNSRMDDGFRFFKEMELFKCKPDLISYNTIVEGLCRAGKVKIAHNVVKGMCLKG 685
LI+GFCMNS +D+GFRFFKEME FKC PD+++YNTIV+GLCR GKV IAHNVVKGM K
Sbjct: 1111 LIKGFCMNSMVDEGFRFFKEMERFKCDPDVVTYNTIVDGLCRVGKVGIAHNVVKGMSKKS 1170
Query: 684 ENLKPNVVTYTTLVRGYCRNQEIDMMLDVLREMVDSGIKPNEITYNTIIQGLCEARMYDK 505
+L PNVVTYTTL+RGYC Q+ID L V +EM+ G+KPN+ITYNT+I+GL E YDK
Sbjct: 1171 LDLNPNVVTYTTLLRGYCMKQDIDEALAVFQEMICRGLKPNKITYNTLIKGLSEVHKYDK 1230
Query: 504 IKDILEGCRGESGGFVPNTCTFNMVMNSHCNVGDLNEAFKVFEKMKELKVQQDSASYSLL 325
IK+ILE GE G F +TCTFN ++N+HCN G+++EA V ++M E+KVQ DSA+YS++
Sbjct: 1231 IKEILER-MGEDGRFTLDTCTFNTLINAHCNAGNMDEALNVLKRMSEMKVQSDSATYSVI 1289
Query: 324 IRGLCQKLEFGRAXXXXXXXXXXXXXLRDDGCTPLVAAYNPIFEYLCRNGKTKKAERVLR 145
IR LCQ +F +A L GCTPLVAAYNP+FEYLC NGKTKKAERV R
Sbjct: 1290 IRSLCQIADFEKAEEFFDELAKKEILLSHVGCTPLVAAYNPMFEYLCANGKTKKAERVFR 1349
Query: 144 QLMRRGKQDPPAYRTLILGHCKEGTCVAGHKILVLMLRRNFVPDLETY 1
QL++RG+QDPPAY+TLILGHCKEGT AG+++LVLMLRR+F P E Y
Sbjct: 1350 QLLKRGRQDPPAYKTLILGHCKEGTFEAGYELLVLMLRRDFEPGFEIY 1397
Score = 65.5 bits (158), Expect = 1e-07
Identities = 60/267 (22%), Positives = 99/267 (37%), Gaps = 42/267 (15%)
Frame = -3
Query: 1203 SYFLMLENFGRARNLNSARNFLLSIPAKSNSAVPLTDKLFNSLIRSYGNAGLFKESIKVF 1024
+Y +++ R + A N + + KS P + +L+R Y E++ VF
Sbjct: 1142 TYNTIVDGLCRVGKVGIAHNVVKGMSKKSLDLNPNV-VTYTTLLRGYCMKQDIDEALAVF 1200
Query: 1023 KTMKSMGISPSTFTFNHLFFILLKRGRTGMVFELYDEMLRTYGAKPDLYTFNILIRGFCM 844
+ M G+ P+ T+N L L + + + E+ + M D TFN LI C
Sbjct: 1201 QEMICRGLKPNKITYNTLIKGLSEVHKYDKIKEILERMGEDGRFTLDTCTFNTLINAHCN 1260
Query: 843 NSRMDDGFRFFKEMELFK------------------------------------------ 790
MD+ K M K
Sbjct: 1261 AGNMDEALNVLKRMSEMKVQSDSATYSVIIRSLCQIADFEKAEEFFDELAKKEILLSHVG 1320
Query: 789 CKPDLISYNTIVEGLCRAGKVKIAHNVVKGMCLKGENLKPNVVTYTTLVRGYCRNQEIDM 610
C P + +YN + E LC GK K A V + + +G P Y TL+ G+C+ +
Sbjct: 1321 CTPLVAAYNPMFEYLCANGKTKKAERVFRQLLKRGRQDPP---AYKTLILGHCKEGTFEA 1377
Query: 609 MLDVLREMVDSGIKPNEITYNTIIQGL 529
++L M+ +P Y+++I GL
Sbjct: 1378 GYELLVLMLRRDFEPGFEIYDSLITGL 1404
>ref|XP_012475332.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
chloroplastic [Gossypium raimondii]
Length = 678
Score = 598 bits (1541), Expect = e-168
Identities = 293/461 (63%), Positives = 362/461 (78%), Gaps = 1/461 (0%)
Frame = -3
Query: 1380 MARLINTKPWSAQLESSLSTHTP-LSETSVLQTLRLIKAPANALHFFNWTRNTGFAHSEH 1204
MAR+IN+ PWS++LESS+S+ +P LS+T+VLQTLRLIK P+ AL FFNW + GF H
Sbjct: 1 MARVINSTPWSSELESSISSLSPSLSKTTVLQTLRLIKNPSKALQFFNWVQQMGFPHDAQ 60
Query: 1203 SYFLMLENFGRARNLNSARNFLLSIPAKSNSAVPLTDKLFNSLIRSYGNAGLFKESIKVF 1024
S+FLM+E G+ RNLN+ARN +LSI +SN +V L DK FNSLIRSYG AGLF+ESIKVF
Sbjct: 61 SFFLMIEILGKERNLNAARNLMLSIEKRSNGSVKLEDKFFNSLIRSYGKAGLFQESIKVF 120
Query: 1023 KTMKSMGISPSTFTFNHLFFILLKRGRTGMVFELYDEMLRTYGAKPDLYTFNILIRGFCM 844
+TMKS+G+SPS +FN+L ILLKRGRT M +++EML TYG PD+YTFNILI+GFCM
Sbjct: 121 ETMKSIGVSPSVVSFNNLLSILLKRGRTNMAKSVFNEMLSTYGVTPDVYTFNILIKGFCM 180
Query: 843 NSRMDDGFRFFKEMELFKCKPDLISYNTIVEGLCRAGKVKIAHNVVKGMCLKGENLKPNV 664
NS +D+GFRFFKEME FKC PD+++YNTIV+GLCR GKV IAHNVVKGM K +L PNV
Sbjct: 181 NSMVDEGFRFFKEMERFKCDPDVVTYNTIVDGLCRVGKVGIAHNVVKGMSKKSLDLNPNV 240
Query: 663 VTYTTLVRGYCRNQEIDMMLDVLREMVDSGIKPNEITYNTIIQGLCEARMYDKIKDILEG 484
VTYTTL+RGYC Q+ID L V +EM+ G+KPN+ITYNT+I+GL E YDKIK+ILE
Sbjct: 241 VTYTTLLRGYCMKQDIDEALAVFQEMICRGLKPNKITYNTLIKGLSEVHKYDKIKEILER 300
Query: 483 CRGESGGFVPNTCTFNMVMNSHCNVGDLNEAFKVFEKMKELKVQQDSASYSLLIRGLCQK 304
GE G F +TCTFN ++N+HCN G+++EA V ++M E+KVQ DSA+YS++IR LCQ
Sbjct: 301 -MGEDGRFTLDTCTFNTLINAHCNAGNMDEALNVLKRMSEMKVQSDSATYSVIIRSLCQI 359
Query: 303 LEFGRAXXXXXXXXXXXXXLRDDGCTPLVAAYNPIFEYLCRNGKTKKAERVLRQLMRRGK 124
+F +A L GCTPLVAAYNP+FEYLC NGKTKKAERV RQL++RG+
Sbjct: 360 ADFEKAEEFFDELAKKEILLSHVGCTPLVAAYNPMFEYLCANGKTKKAERVFRQLLKRGR 419
Query: 123 QDPPAYRTLILGHCKEGTCVAGHKILVLMLRRNFVPDLETY 1
QDPPAY+TLILGHCKEGT AG+++LVLMLRR+F P E Y
Sbjct: 420 QDPPAYKTLILGHCKEGTFEAGYELLVLMLRRDFEPGFEIY 460
Score = 65.5 bits (158), Expect = 1e-07
Identities = 60/267 (22%), Positives = 99/267 (37%), Gaps = 42/267 (15%)
Frame = -3
Query: 1203 SYFLMLENFGRARNLNSARNFLLSIPAKSNSAVPLTDKLFNSLIRSYGNAGLFKESIKVF 1024
+Y +++ R + A N + + KS P + +L+R Y E++ VF
Sbjct: 205 TYNTIVDGLCRVGKVGIAHNVVKGMSKKSLDLNPNV-VTYTTLLRGYCMKQDIDEALAVF 263
Query: 1023 KTMKSMGISPSTFTFNHLFFILLKRGRTGMVFELYDEMLRTYGAKPDLYTFNILIRGFCM 844
+ M G+ P+ T+N L L + + + E+ + M D TFN LI C
Sbjct: 264 QEMICRGLKPNKITYNTLIKGLSEVHKYDKIKEILERMGEDGRFTLDTCTFNTLINAHCN 323
Query: 843 NSRMDDGFRFFKEMELFK------------------------------------------ 790
MD+ K M K
Sbjct: 324 AGNMDEALNVLKRMSEMKVQSDSATYSVIIRSLCQIADFEKAEEFFDELAKKEILLSHVG 383
Query: 789 CKPDLISYNTIVEGLCRAGKVKIAHNVVKGMCLKGENLKPNVVTYTTLVRGYCRNQEIDM 610
C P + +YN + E LC GK K A V + + +G P Y TL+ G+C+ +
Sbjct: 384 CTPLVAAYNPMFEYLCANGKTKKAERVFRQLLKRGRQDPP---AYKTLILGHCKEGTFEA 440
Query: 609 MLDVLREMVDSGIKPNEITYNTIIQGL 529
++L M+ +P Y+++I GL
Sbjct: 441 GYELLVLMLRRDFEPGFEIYDSLITGL 467
>ref|XP_008344150.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g02060, chloroplastic [Malus domestica]
Length = 1210
Score = 597 bits (1540), Expect = e-168
Identities = 302/486 (62%), Positives = 362/486 (74%), Gaps = 7/486 (1%)
Frame = -3
Query: 1437 EDDIHIQN------AKPTKSKKARTMARLINTKPWSAQLESSLST-HTPLSETSVLQTLR 1279
+DD +QN K+K+A+ MA+LI++ PWS +LESSLST + LS+T+V QTL
Sbjct: 44 KDDEQLQNNTQRPKLSTPKTKRAKDMAKLIDSMPWSTELESSLSTIASSLSKTTVHQTLH 103
Query: 1278 LIKAPANALHFFNWTRNTGFAHSEHSYFLMLENFGRARNLNSARNFLLSIPAKSNSAVPL 1099
LIKAP+ AL FF W GF+H++ SY LMLE GR RNLN+ARNFL SI KSN AV L
Sbjct: 104 LIKAPSKALQFFKWAEVMGFSHNDQSYXLMLEILGRNRNLNAARNFLFSIEKKSNGAVKL 163
Query: 1098 TDKLFNSLIRSYGNAGLFKESIKVFKTMKSMGISPSTFTFNHLFFILLKRGRTGMVFELY 919
D+ FNSLIR+YG AGLF+ESIK+F TMKS+G+SPS +FN L ILL++GRT M +Y
Sbjct: 164 EDRFFNSLIRNYGRAGLFQESIKLFSTMKSIGVSPSVVSFNSLLXILLRKGRTNMAKNVY 223
Query: 918 DEMLRTYGAKPDLYTFNILIRGFCMNSRMDDGFRFFKEMELFKCKPDLISYNTIVEGLCR 739
DEM+ YGA PD TFN LIRGFCMNS +D+GFRFFKEM FKC PD+I+YNT+V+GLCR
Sbjct: 224 DEMVSMYGATPDTCTFNTLIRGFCMNSMVDEGFRFFKEMSRFKCDPDVITYNTLVDGLCR 283
Query: 738 AGKVKIAHNVVKGMCLKGENLKPNVVTYTTLVRGYCRNQEIDMMLDVLREMVDSGIKPNE 559
AGKV IAHNVVKGM + +L PN+VTYTTL+RGYC QEID L VL EM G+KPN
Sbjct: 284 AGKVGIAHNVVKGMSKRSADLNPNIVTYTTLIRGYCMKQEIDEALCVLEEMTSQGLKPNG 343
Query: 558 ITYNTIIQGLCEARMYDKIKDILEGCRGESGGFVPNTCTFNMVMNSHCNVGDLNEAFKVF 379
IT NT+I+GLCEA DKIKDILEG G F P+TCTFN +M+SHCN G+L+EA KVF
Sbjct: 344 ITCNTLIKGLCEAHKLDKIKDILEGTM-SGGEFTPDTCTFNTLMHSHCNAGNLDEALKVF 402
Query: 378 EKMKELKVQQDSASYSLLIRGLCQKLEFGRAXXXXXXXXXXXXXLRDDGCTPLVAAYNPI 199
KM ELKV DSA+YS+LIR LCQ+ ++ RA L DDGC PLVA+YNPI
Sbjct: 403 AKMSELKVPPDSATYSVLIRSLCQRGDYSRAEELFDELSKKEILLSDDGCKPLVASYNPI 462
Query: 198 FEYLCRNGKTKKAERVLRQLMRRGKQDPPAYRTLILGHCKEGTCVAGHKILVLMLRRNFV 19
FEYLC GK KKAE V RQLMRRG QDP +Y+TLI+GHCKEGT G+++LV MLRR+FV
Sbjct: 463 FEYLCSKGKIKKAEAVFRQLMRRGTQDPVSYKTLIMGHCKEGTFETGYELLVWMLRRDFV 522
Query: 18 PDLETY 1
PD+E Y
Sbjct: 523 PDVEIY 528