BLASTX nr result
ID: Forsythia21_contig00031824
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Forsythia21_contig00031824
(398 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_011089799.1| PREDICTED: THO complex subunit 4A [Sesamum i... 70 7e-10
ref|XP_012474521.1| PREDICTED: THO complex subunit 4A-like [Goss... 65 2e-08
ref|XP_007016490.1| RNA-binding family protein [Theobroma cacao]... 64 3e-08
ref|XP_002284215.1| PREDICTED: THO complex subunit 4A [Vitis vin... 64 5e-08
ref|XP_012471387.1| PREDICTED: THO complex subunit 4A [Gossypium... 63 7e-08
gb|KHG17012.1| THO complex subunit 4 [Gossypium arboreum] gi|728... 63 7e-08
gb|KHG13055.1| THO complex subunit 4 [Gossypium arboreum] 63 7e-08
gb|EPS62990.1| hypothetical protein M569_11800 [Genlisea aurea] 63 7e-08
ref|XP_012064998.1| PREDICTED: THO complex subunit 4A [Jatropha ... 63 9e-08
ref|XP_012472781.1| PREDICTED: THO complex subunit 4A-like [Goss... 62 1e-07
ref|XP_002531375.1| RNA and export factor binding protein, putat... 62 1e-07
ref|XP_006373955.1| hypothetical protein POPTR_0016s11470g [Popu... 62 2e-07
gb|KHG01793.1| THO complex subunit 4 [Gossypium arboreum] 60 4e-07
ref|XP_010260105.1| PREDICTED: THO complex subunit 4A [Nelumbo n... 60 7e-07
gb|KHG13056.1| THO complex subunit 4 [Gossypium arboreum] 59 1e-06
ref|XP_012461902.1| PREDICTED: THO complex subunit 4A-like isofo... 59 1e-06
gb|KHG30677.1| THO complex subunit 4 [Gossypium arboreum] 59 1e-06
ref|XP_007150304.1| hypothetical protein PHAVU_005G142200g [Phas... 57 4e-06
ref|XP_006373956.1| hypothetical protein POPTR_0016s11470g [Popu... 57 5e-06
>ref|XP_011089799.1| PREDICTED: THO complex subunit 4A [Sesamum indicum]
Length = 231
Score = 69.7 bits (169), Expect = 7e-10
Identities = 39/87 (44%), Positives = 46/87 (52%)
Frame = -3
Query: 396 PMKIELVGTNLATAAAVIPSAGAFGDANVVTXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 217
PMKIELVGTN++T+ AV+P A F D +V
Sbjct: 145 PMKIELVGTNVSTSGAVLPPAAPFADPSVALRSGGQGRGGFGRPRGGGRGRGFGRGRGRG 204
Query: 216 XXXGEKVSAEDLDADLEKYHSNAMQTN 136
EKVSAEDLDADLEKYH++AMQTN
Sbjct: 205 RGREEKVSAEDLDADLEKYHADAMQTN 231
>ref|XP_012474521.1| PREDICTED: THO complex subunit 4A-like [Gossypium raimondii]
gi|763741358|gb|KJB08857.1| hypothetical protein
B456_001G108500 [Gossypium raimondii]
gi|763741359|gb|KJB08858.1| hypothetical protein
B456_001G108500 [Gossypium raimondii]
gi|763741360|gb|KJB08859.1| hypothetical protein
B456_001G108500 [Gossypium raimondii]
gi|763741362|gb|KJB08861.1| hypothetical protein
B456_001G108500 [Gossypium raimondii]
gi|763741363|gb|KJB08862.1| hypothetical protein
B456_001G108500 [Gossypium raimondii]
Length = 241
Score = 64.7 bits (156), Expect = 2e-08
Identities = 39/87 (44%), Positives = 43/87 (49%)
Frame = -3
Query: 396 PMKIELVGTNLATAAAVIPSAGAFGDANVVTXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 217
PMKIE+VGTN+AT A + G FG +N
Sbjct: 155 PMKIEIVGTNIATPTAPSAANGTFGSSNGAPRGGQGRGGGFGRQRGGAGGRGFGRGRGQG 214
Query: 216 XXXGEKVSAEDLDADLEKYHSNAMQTN 136
GEKVSAEDLDADLEKYHS AMQTN
Sbjct: 215 KGRGEKVSAEDLDADLEKYHSEAMQTN 241
>ref|XP_007016490.1| RNA-binding family protein [Theobroma cacao]
gi|508786853|gb|EOY34109.1| RNA-binding family protein
[Theobroma cacao]
Length = 241
Score = 64.3 bits (155), Expect = 3e-08
Identities = 39/87 (44%), Positives = 44/87 (50%)
Frame = -3
Query: 396 PMKIELVGTNLATAAAVIPSAGAFGDANVVTXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 217
PMKIE+VGTN+AT A GAFG++N
Sbjct: 155 PMKIEIVGTNVATPGAPSAGNGAFGNSNGAPRGGHGRGGGFGKQRGGGGGRGFGRGRGRG 214
Query: 216 XXXGEKVSAEDLDADLEKYHSNAMQTN 136
GEKVSAEDLDA+LEKYHS AMQTN
Sbjct: 215 KGRGEKVSAEDLDAELEKYHSEAMQTN 241
>ref|XP_002284215.1| PREDICTED: THO complex subunit 4A [Vitis vinifera]
gi|297746115|emb|CBI16171.3| unnamed protein product
[Vitis vinifera]
Length = 243
Score = 63.5 bits (153), Expect = 5e-08
Identities = 41/88 (46%), Positives = 46/88 (52%), Gaps = 1/88 (1%)
Frame = -3
Query: 396 PMKIELVGTNLATAAAVIP-SAGAFGDANVVTXXXXXXXXXXXXXXXXXXXXXXXXXXXX 220
PMKIE+VGTN+AT AAV P + G FG++N
Sbjct: 156 PMKIEIVGTNIATPAAVPPVTNGTFGNSNGGLRSAQGRVGSQGRPRGGSGGRGFGRGRGR 215
Query: 219 XXXXGEKVSAEDLDADLEKYHSNAMQTN 136
GEKVSAEDLDADLEKYHS AMQ N
Sbjct: 216 GRGRGEKVSAEDLDADLEKYHSEAMQIN 243
>ref|XP_012471387.1| PREDICTED: THO complex subunit 4A [Gossypium raimondii]
gi|763752760|gb|KJB20148.1| hypothetical protein
B456_003G135200 [Gossypium raimondii]
gi|763752761|gb|KJB20149.1| hypothetical protein
B456_003G135200 [Gossypium raimondii]
gi|763752762|gb|KJB20150.1| hypothetical protein
B456_003G135200 [Gossypium raimondii]
Length = 241
Score = 63.2 bits (152), Expect = 7e-08
Identities = 39/87 (44%), Positives = 44/87 (50%)
Frame = -3
Query: 396 PMKIELVGTNLATAAAVIPSAGAFGDANVVTXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 217
PMKIE+VGTN+AT AA + AFG +N
Sbjct: 155 PMKIEIVGTNIATPAAPTVANVAFGSSNGAPRGGRGRGGGFRRQRGVAGGRGFGRGRGQG 214
Query: 216 XXXGEKVSAEDLDADLEKYHSNAMQTN 136
GEKVSAEDLDADLEKYH+ AMQTN
Sbjct: 215 RGRGEKVSAEDLDADLEKYHTEAMQTN 241
>gb|KHG17012.1| THO complex subunit 4 [Gossypium arboreum]
gi|728837570|gb|KHG17013.1| THO complex subunit 4
[Gossypium arboreum]
Length = 241
Score = 63.2 bits (152), Expect = 7e-08
Identities = 39/87 (44%), Positives = 44/87 (50%)
Frame = -3
Query: 396 PMKIELVGTNLATAAAVIPSAGAFGDANVVTXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 217
PMKIE+VGTN+AT AA + AFG +N
Sbjct: 155 PMKIEIVGTNIATPAAPTVANVAFGSSNGAPRGGRGRGGGFRRQRGVAGGRGFGRGRGQG 214
Query: 216 XXXGEKVSAEDLDADLEKYHSNAMQTN 136
GEKVSAEDLDADLEKYH+ AMQTN
Sbjct: 215 RGRGEKVSAEDLDADLEKYHTEAMQTN 241
>gb|KHG13055.1| THO complex subunit 4 [Gossypium arboreum]
Length = 241
Score = 63.2 bits (152), Expect = 7e-08
Identities = 38/87 (43%), Positives = 43/87 (49%)
Frame = -3
Query: 396 PMKIELVGTNLATAAAVIPSAGAFGDANVVTXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 217
P+KIE+VGTN+AT A + G FG +N
Sbjct: 155 PIKIEIVGTNIATPTAPSAANGTFGSSNGAPRGGQGRGGGFGRQRGGAGGRGFGRGRGQG 214
Query: 216 XXXGEKVSAEDLDADLEKYHSNAMQTN 136
GEKVSAEDLDADLEKYHS AMQTN
Sbjct: 215 KGRGEKVSAEDLDADLEKYHSEAMQTN 241
>gb|EPS62990.1| hypothetical protein M569_11800 [Genlisea aurea]
Length = 239
Score = 63.2 bits (152), Expect = 7e-08
Identities = 38/90 (42%), Positives = 43/90 (47%), Gaps = 3/90 (3%)
Frame = -3
Query: 396 PMKIELVGTNLATAAAVIPSAGAFGDANVVTXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 217
PM+IELVGTNL+T+ V P G F D NV
Sbjct: 150 PMQIELVGTNLSTSTGVAPGLGIFADVNVAPPRYVVLNNGFMRGRGGRGRGRGRGGGRGW 209
Query: 216 XXXG---EKVSAEDLDADLEKYHSNAMQTN 136
E VSAEDLDADLEKYH+N+MQTN
Sbjct: 210 GRGRGRGENVSAEDLDADLEKYHANSMQTN 239
>ref|XP_012064998.1| PREDICTED: THO complex subunit 4A [Jatropha curcas]
gi|643738220|gb|KDP44208.1| hypothetical protein
JCGZ_05675 [Jatropha curcas]
Length = 248
Score = 62.8 bits (151), Expect = 9e-08
Identities = 41/94 (43%), Positives = 46/94 (48%), Gaps = 7/94 (7%)
Frame = -3
Query: 396 PMKIELVGTNLATAAAVIPSAGAFGDANVVTXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 217
PMKIE+VGTN+AT AA + G FG +N V+
Sbjct: 155 PMKIEIVGTNIATPAAPSAANGTFGSSNAVSRGGQGRGGAVGRQRGGSGGGRGFGRGRGR 214
Query: 216 XXXG-------EKVSAEDLDADLEKYHSNAMQTN 136
G EKVSAEDLDADLEKYHS AMQTN
Sbjct: 215 GRGGGGGGGRGEKVSAEDLDADLEKYHSEAMQTN 248
>ref|XP_012472781.1| PREDICTED: THO complex subunit 4A-like [Gossypium raimondii]
gi|763754210|gb|KJB21541.1| hypothetical protein
B456_004G004300 [Gossypium raimondii]
gi|763754211|gb|KJB21542.1| hypothetical protein
B456_004G004300 [Gossypium raimondii]
Length = 241
Score = 62.4 bits (150), Expect = 1e-07
Identities = 36/87 (41%), Positives = 43/87 (49%)
Frame = -3
Query: 396 PMKIELVGTNLATAAAVIPSAGAFGDANVVTXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 217
PMKIE+VG N++T A + G FG++N T
Sbjct: 155 PMKIEIVGANISTPVAPSAANGTFGNSNGATRGGQGRGVGFGRQRGGIGGRGSGRGHGRG 214
Query: 216 XXXGEKVSAEDLDADLEKYHSNAMQTN 136
GEK+S EDLDADLEKYHS AMQTN
Sbjct: 215 RGRGEKISTEDLDADLEKYHSEAMQTN 241
>ref|XP_002531375.1| RNA and export factor binding protein, putative [Ricinus communis]
gi|223529035|gb|EEF31023.1| RNA and export factor
binding protein, putative [Ricinus communis]
Length = 247
Score = 62.0 bits (149), Expect = 1e-07
Identities = 40/88 (45%), Positives = 45/88 (51%), Gaps = 1/88 (1%)
Frame = -3
Query: 396 PMKIELVGTNLATAAAVIPSAGAFGDAN-VVTXXXXXXXXXXXXXXXXXXXXXXXXXXXX 220
PMKIE+VGTN+AT AA + G FG++N
Sbjct: 160 PMKIEIVGTNIATPAATPAANGNFGNSNGAPRGGQGRGGTMRRPRGASSDGRGFGRGRGR 219
Query: 219 XXXXGEKVSAEDLDADLEKYHSNAMQTN 136
GEKVSAEDLDADLEKYHS AMQTN
Sbjct: 220 GRGRGEKVSAEDLDADLEKYHSEAMQTN 247
>ref|XP_006373955.1| hypothetical protein POPTR_0016s11470g [Populus trichocarpa]
gi|550321275|gb|ERP51752.1| hypothetical protein
POPTR_0016s11470g [Populus trichocarpa]
Length = 244
Score = 61.6 bits (148), Expect = 2e-07
Identities = 38/88 (43%), Positives = 44/88 (50%), Gaps = 1/88 (1%)
Frame = -3
Query: 396 PMKIELVGTNLATAAAVIPSA-GAFGDANVVTXXXXXXXXXXXXXXXXXXXXXXXXXXXX 220
PMKIE+VGTN+AT AV PS G + + N+
Sbjct: 157 PMKIEIVGTNIATRPAVPPSTNGMYRNQNIAAPRSSQGRGGTTGRPRGGGHGVRRGGRGR 216
Query: 219 XXXXGEKVSAEDLDADLEKYHSNAMQTN 136
GEK+SAEDLDADLEKYHS AMQ N
Sbjct: 217 GRGRGEKISAEDLDADLEKYHSEAMQEN 244
>gb|KHG01793.1| THO complex subunit 4 [Gossypium arboreum]
Length = 241
Score = 60.5 bits (145), Expect = 4e-07
Identities = 36/87 (41%), Positives = 42/87 (48%)
Frame = -3
Query: 396 PMKIELVGTNLATAAAVIPSAGAFGDANVVTXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 217
PMKIE+VG N++T A + G FG++N
Sbjct: 155 PMKIEIVGANVSTTAVPSAANGTFGNSNGAPRGGQGRGVGFGRQRGGVGGRGSGRGHGRG 214
Query: 216 XXXGEKVSAEDLDADLEKYHSNAMQTN 136
GEKVS EDLDADLEKYHS AMQTN
Sbjct: 215 RGRGEKVSTEDLDADLEKYHSEAMQTN 241
>ref|XP_010260105.1| PREDICTED: THO complex subunit 4A [Nelumbo nucifera]
Length = 244
Score = 59.7 bits (143), Expect = 7e-07
Identities = 39/88 (44%), Positives = 45/88 (51%), Gaps = 1/88 (1%)
Frame = -3
Query: 396 PMKIELVGTNLATAAAVIPSA-GAFGDANVVTXXXXXXXXXXXXXXXXXXXXXXXXXXXX 220
PMKIE+VGTN+AT AV P+A G FG+ N V
Sbjct: 158 PMKIEVVGTNIATPVAVPPAANGGFGNPNGVPRSGQGRGGAMGRSRGGGGRGFGRGRGRR 217
Query: 219 XXXXGEKVSAEDLDADLEKYHSNAMQTN 136
E++SAEDLDADLEKYHS AMQ N
Sbjct: 218 RDRG-EQISAEDLDADLEKYHSEAMQIN 244
>gb|KHG13056.1| THO complex subunit 4 [Gossypium arboreum]
Length = 237
Score = 59.3 bits (142), Expect = 1e-06
Identities = 38/87 (43%), Positives = 43/87 (49%)
Frame = -3
Query: 396 PMKIELVGTNLATAAAVIPSAGAFGDANVVTXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 217
P+KIE+VGTN+AT A + G FG +N
Sbjct: 155 PIKIEIVGTNIATPTAPSAANGTFGSSN----GAPRGGGGFGRQRGGAGGRGFGRGRGQG 210
Query: 216 XXXGEKVSAEDLDADLEKYHSNAMQTN 136
GEKVSAEDLDADLEKYHS AMQTN
Sbjct: 211 KGRGEKVSAEDLDADLEKYHSEAMQTN 237
>ref|XP_012461902.1| PREDICTED: THO complex subunit 4A-like isoform X1 [Gossypium
raimondii] gi|763816913|gb|KJB83765.1| hypothetical
protein B456_013G264600 [Gossypium raimondii]
gi|763816914|gb|KJB83766.1| hypothetical protein
B456_013G264600 [Gossypium raimondii]
Length = 238
Score = 58.9 bits (141), Expect = 1e-06
Identities = 38/87 (43%), Positives = 44/87 (50%)
Frame = -3
Query: 396 PMKIELVGTNLATAAAVIPSAGAFGDANVVTXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 217
PMKIE+VGTN+AT A + + GAF +N
Sbjct: 155 PMKIEIVGTNIATPPAPLGANGAFRSSN---GAIKGGQGKGGGFGRQRGGGAAGRGRGRG 211
Query: 216 XXXGEKVSAEDLDADLEKYHSNAMQTN 136
GEKVSAEDLDADLEKYHS +MQTN
Sbjct: 212 KGRGEKVSAEDLDADLEKYHSESMQTN 238
>gb|KHG30677.1| THO complex subunit 4 [Gossypium arboreum]
Length = 238
Score = 58.9 bits (141), Expect = 1e-06
Identities = 38/87 (43%), Positives = 44/87 (50%)
Frame = -3
Query: 396 PMKIELVGTNLATAAAVIPSAGAFGDANVVTXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 217
PMKIE+VGTN+AT A + + GAF +N
Sbjct: 155 PMKIEIVGTNIATPPAPLGANGAFRSSN---GAMKGGQGKGGGFGRQRGGGAAGRGRGRG 211
Query: 216 XXXGEKVSAEDLDADLEKYHSNAMQTN 136
GEKVSAEDLDADLEKYHS +MQTN
Sbjct: 212 KGRGEKVSAEDLDADLEKYHSESMQTN 238
>ref|XP_007150304.1| hypothetical protein PHAVU_005G142200g [Phaseolus vulgaris]
gi|593699733|ref|XP_007150305.1| hypothetical protein
PHAVU_005G142200g [Phaseolus vulgaris]
gi|561023568|gb|ESW22298.1| hypothetical protein
PHAVU_005G142200g [Phaseolus vulgaris]
gi|561023569|gb|ESW22299.1| hypothetical protein
PHAVU_005G142200g [Phaseolus vulgaris]
Length = 245
Score = 57.4 bits (137), Expect = 4e-06
Identities = 36/89 (40%), Positives = 44/89 (49%), Gaps = 2/89 (2%)
Frame = -3
Query: 396 PMKIELVGTNLATAAAVIPSAGAFGDANVV--TXXXXXXXXXXXXXXXXXXXXXXXXXXX 223
PMK+E+VGTN+AT AAV P G FG++ +
Sbjct: 157 PMKVEIVGTNIATHAAVPPVNGTFGNSGGPPRSGQGRSGLLGRPRGAPRGRGSSRRGRGG 216
Query: 222 XXXXXGEKVSAEDLDADLEKYHSNAMQTN 136
EKVSAEDLDA+LEKYH+ AMQ N
Sbjct: 217 RGRDRDEKVSAEDLDAELEKYHAEAMQLN 245
>ref|XP_006373956.1| hypothetical protein POPTR_0016s11470g [Populus trichocarpa]
gi|550321276|gb|ERP51753.1| hypothetical protein
POPTR_0016s11470g [Populus trichocarpa]
Length = 245
Score = 57.0 bits (136), Expect = 5e-06
Identities = 37/89 (41%), Positives = 43/89 (48%), Gaps = 2/89 (2%)
Frame = -3
Query: 396 PMKIELVGTNLATAAAVIPSA-GAFGDANVVTXXXXXXXXXXXXXXXXXXXXXXXXXXXX 220
PMKIE+VGTN+AT AV PS G + + N+
Sbjct: 157 PMKIEIVGTNIATRPAVPPSTNGMYRNQNIAAPRSSSQGRGGTTGRPRGGGHGVRRGGRG 216
Query: 219 XXXXG-EKVSAEDLDADLEKYHSNAMQTN 136
EK+SAEDLDADLEKYHS AMQ N
Sbjct: 217 RGRGRGEKISAEDLDADLEKYHSEAMQEN 245