BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Forsythia21_contig00028094
         (942 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_861409.1| putative capsid protein [Cestrum yellow leaf cu...    80   2e-12
ref|NP_068728.1| putative coat protein [Soybean chlorotic mottle...    79   3e-12
ref|XP_003619554.1| Capsid protein [Medicago truncatula] gi|3554...    68   8e-09
ref|YP_004300272.1| coat protein [Sweet potato vein clearing vir...    66   4e-08
sp|Q00956.1|CAPSD_CAMVN RecName: Full=Capsid protein; Short=CP; ...    64   1e-07
emb|CCG14715.1| coat protein [Strawberry vein banding virus]           64   1e-07
dbj|BAO53588.1| capsid protein [Cauliflower mosaic virus]              63   3e-07
dbj|BAO53574.1| capsid protein [Cauliflower mosaic virus]              63   3e-07
dbj|BAO53560.1| capsid protein [Cauliflower mosaic virus]              63   3e-07
dbj|BAO53455.1| capsid protein [Cauliflower mosaic virus]              63   3e-07
sp|Q02951.1|CAPSD_CAMVE RecName: Full=Capsid protein; Short=CP; ...    63   3e-07
gb|AFI61741.1| capsid protein [Cauliflower mosaic virus]               63   3e-07
ref|YP_002519386.1| putative capsid protein [Rudbeckia flower di...    63   3e-07
gb|AGT42111.1| coat protein [Cauliflower mosaic virus] gi|591288...    63   3e-07
emb|CCK73153.1| coat protein, partial [Cauliflower mosaic virus]       63   3e-07
gb|AKB94070.1| ORF IV protein [Strawberry vein banding virus]          62   4e-07
gb|AGT42181.1| coat protein [Cauliflower mosaic virus] gi|591288...    62   4e-07
sp|P03544.1|CAPSD_CAMVD RecName: Full=Capsid protein; Short=CP; ...    62   6e-07
gb|AII80285.1| capsid protein [Cauliflower mosaic virus]               62   6e-07
gb|AII00789.1| capsid protein [Cauliflower mosaic virus]               62   6e-07

>ref|NP_861409.1| putative capsid protein [Cestrum yellow leaf curling virus]
           gi|81991105|sp|Q7TD09.1|CAPSD_CYLCV RecName: Full=Capsid
           protein; Short=CP; AltName: Full=coat protein [Cestrum
           yellow leaf curling virus] gi|32305281|gb|AAP78923.1|
           putative capsid protein [Cestrum yellow leaf curling
           virus]
          Length = 501

 Score = 80.5 bits (197), Expect = 2e-12
 Identities = 50/155 (32%), Positives = 71/155 (45%), Gaps = 3/155 (1%)
 Frame = -2

Query: 458 ISSDYIPKKQGNRIAILDLDCTLEPKKLIDAWYSDIMISMIINKEIHRSKTNS-WSYVIA 282
           I  +Y P  Q    +IL+LDC      L  +W S   + + +NK       N  W+Y   
Sbjct: 136 IPKEYKPIHQDENSSILNLDCIDNAPALFVSWTSKHGLELQLNKHFENFSDNEIWNYTQY 195

Query: 281 STRGNVRAYLENFTY--DVKNEIWKDCQANNPAFIKRIIDQIYKQFTRQTYEAFKSKRST 108
            TRG+V+ +L    Y  DV   +    Q    A  K I+  IY +F  +           
Sbjct: 196 YTRGSVQKFLSEQDYQTDVAPNLAL-VQGGPYAKFKYIVQTIYGEFIGKDIRDHSQDLIN 254

Query: 107 IEVSDALNHLEKLSICDMCYFENYACEFSKYFYLV 3
            E   A  HL  + ICD+CYF+NY CE+ KYFY++
Sbjct: 255 QEAEKARFHLANMIICDLCYFDNYTCEYRKYFYML 289


>ref|NP_068728.1| putative coat protein [Soybean chlorotic mottle virus]
           gi|18266819|sp|P15627.2|CAPSD_SOCMV RecName: Full=Capsid
           protein; Short=CP; AltName: Full=Coat protein [Soybean
           chlorotic mottle virus] gi|11322952|emb|CAC16944.1|
           putative coat protein [Soybean chlorotic mottle virus]
          Length = 441

 Score = 79.3 bits (194), Expect = 3e-12
 Identities = 52/167 (31%), Positives = 81/167 (48%), Gaps = 9/167 (5%)
 Frame = -2

Query: 482 PESKNMGY--ISSDYIPKKQG-NRIAILDLDCTLEPKKLIDAWYSDIMISMIINKEIHR- 315
           PE     Y  I  +Y+P  Q  + I +LD+DC    +K+I  W++   I + IN+E+   
Sbjct: 84  PEFTRFKYQKIPKEYVPAHQTTSTIGVLDIDCVANTEKIIKEWFNHHSILITINEELKNL 143

Query: 314 SKTNSWSYVIASTRGNVRAYLENFTYDVKNEIWKDCQANNPAFIKRIIDQIYKQFTRQTY 135
           S  +++ Y++  TRG   AYL N   +V + I        PA  K++ D +Y    R+  
Sbjct: 144 SSLDTFYYLVYKTRGIAHAYLSNLPSEVLSRI--------PADRKQVDDWVYNLLLRE-- 193

Query: 134 EAFKSKRSTIEVSDALNH-----LEKLSICDMCYFENYACEFSKYFY 9
             F  +    E  +A +      L  L IC+MCY EN+ CEF   +Y
Sbjct: 194 --FVGRLERPESEEAFSQNNYYKLINLEICNMCYLENFLCEFQSRYY 238


>ref|XP_003619554.1| Capsid protein [Medicago truncatula] gi|355494569|gb|AES75772.1|
           hypothetical protein MTR_6g059420 [Medicago truncatula]
          Length = 306

 Score = 68.2 bits (165), Expect = 8e-09
 Identities = 43/154 (27%), Positives = 76/154 (49%), Gaps = 4/154 (2%)
 Frame = -2

Query: 458 ISSDYIPK-KQGNRIAILDLDCTLEPKKLIDAWYSDIMISMIINKEIHRSKTNSWSYVIA 282
           IS ++ P  ++G    +L+LDC   P+++++ W ++++  M++  +   SK N       
Sbjct: 42  ISDEFKPHYEEGKSKKLLNLDCVRNPEEILERWSNNMI--MLLETDDKFSKVNLMDVKNL 99

Query: 281 STRGNVRAYLENFTYDVKNEIWKD---CQANNPAFIKRIIDQIYKQFTRQTYEAFKSKRS 111
                    L+  T  +++E W+       NN  F K II+ IYK+F        K+K +
Sbjct: 100 LAYRTTWNVLKKLT-SIEDETWQQYARMTENNQQFAKLIIELIYKEFIWFNILEHKAKVN 158

Query: 110 TIEVSDALNHLEKLSICDMCYFENYACEFSKYFY 9
                 A  HL  + IC+MC  +++ CEF KY+Y
Sbjct: 159 KQLRERAKAHLNNMQICNMCEIDSFICEFKKYYY 192


>ref|YP_004300272.1| coat protein [Sweet potato vein clearing virus]
           gi|325698379|gb|ADZ45062.1| coat protein [Sweet potato
           vein clearing virus]
          Length = 650

 Score = 65.9 bits (159), Expect = 4e-08
 Identities = 47/150 (31%), Positives = 72/150 (48%)
 Frame = -2

Query: 458 ISSDYIPKKQGNRIAILDLDCTLEPKKLIDAWYSDIMISMIINKEIHRSKTNSWSYVIAS 279
           ++ D+IPK +      LDLDC  +  ++I AW   I   +  NK    S + +  Y+  S
Sbjct: 312 LNEDFIPKDRKCN-EFLDLDCVKDSDEIIQAWIGYIAKQLTDNKI---SISEAPGYIERS 367

Query: 278 TRGNVRAYLENFTYDVKNEIWKDCQANNPAFIKRIIDQIYKQFTRQTYEAFKSKRSTIEV 99
             GNVR +    + DVK  + K         +K  +  I  +F+  T EA K     ++ 
Sbjct: 368 LIGNVRTWFLQLSDDVKLSLRKSEPGAMDILVKYEL-LIRSEFSSATSEANKKYGEQLKN 426

Query: 98  SDALNHLEKLSICDMCYFENYACEFSKYFY 9
              LN   +L+IC++CY   Y C FSKY+Y
Sbjct: 427 RIFLN---QLAICNLCYINEYCCAFSKYYY 453


>sp|Q00956.1|CAPSD_CAMVN RecName: Full=Capsid protein; Short=CP; AltName: Full=Coat protein
           [Cauliflower mosaic virus (STRAIN NY8153)]
           gi|331570|gb|AAA46357.1| capsid protein [Cauliflower
           mosaic virus] gi|445597|prf||1909346D capsid protein
          Length = 488

 Score = 64.3 bits (155), Expect = 1e-07
 Identities = 38/147 (25%), Positives = 70/147 (47%), Gaps = 2/147 (1%)
 Frame = -2

Query: 443 IPKKQGNRIAILDLDCTLEPKKLIDAWYSDIMISMIINKEIHRSKTNSWSYVIASTRGNV 264
           IP+++   + +L++DC    + LID W ++I + +         KTN   Y+   T   +
Sbjct: 137 IPRQKQTSMGMLNIDCQTNRRTLIDDWAAEIGLIV---------KTNREDYLNPET---I 184

Query: 263 RAYLENFTYDVKNEIWKDCQANNPA--FIKRIIDQIYKQFTRQTYEAFKSKRSTIEVSDA 90
              +E+ T  +  E+ ++ + N      I+++ID++Y  F    Y   K      E   A
Sbjct: 185 LLLMEHKTSGIAKELIRNTRWNRTTGDIIEQVIDRMYTMFLGLNYSDNKVAEKIDEQEKA 244

Query: 89  LNHLEKLSICDMCYFENYACEFSKYFY 9
              + KL +CD+CY E + C++ K  Y
Sbjct: 245 KIRMTKLQLCDICYLEEFTCDYEKNMY 271


>emb|CCG14715.1| coat protein [Strawberry vein banding virus]
          Length = 471

 Score = 64.3 bits (155), Expect = 1e-07
 Identities = 43/151 (28%), Positives = 71/151 (47%), Gaps = 6/151 (3%)
 Frame = -2

Query: 458 ISSDYIPKKQGN--RIAILDLDCTLEPKKLIDAWYSDIMISMIINKEIHRSKTNSWSYVI 285
           I S+YIP K+        LDLDC    ++LI+ W  D  + +II  E  ++ TN +  ++
Sbjct: 96  IPSEYIPNKKTGLTNTKSLDLDCASNRRQLIEEW--DNEMRLIIKTE--KALTNDFDLIL 151

Query: 284 ----ASTRGNVRAYLENFTYDVKNEIWKDCQANNPAFIKRIIDQIYKQFTRQTYEAFKSK 117
               + T GN +  LE+   D     +K   +    F+  + D  Y  F    Y    ++
Sbjct: 152 TLAKSKTVGNAKQLLESLHTDA----FKQASSTGEEFLTTLTDSFYTIFVGTNYLTQGTR 207

Query: 116 RSTIEVSDALNHLEKLSICDMCYFENYACEF 24
                V +A N L KL IC++C  E++ C++
Sbjct: 208 EKEKAVQEARNRLVKLQICNLCSLESFFCDY 238


>dbj|BAO53588.1| capsid protein [Cauliflower mosaic virus]
          Length = 491

 Score = 63.2 bits (152), Expect = 3e-07
 Identities = 39/147 (26%), Positives = 68/147 (46%), Gaps = 2/147 (1%)
 Frame = -2

Query: 443 IPKKQGNRIAILDLDCTLEPKKLIDAWYSDIMISMIINKEIHRSKTNSWSYVIASTRGNV 264
           IP ++   I +L++DC    + LID W ++I + +         KTN   Y+   T   +
Sbjct: 140 IPGQKQTTIGMLNIDCQANRRTLIDDWAAEIGLIV---------KTNREDYLDPET---I 187

Query: 263 RAYLENFTYDVKNEIWKDCQANNPA--FIKRIIDQIYKQFTRQTYEAFKSKRSTIEVSDA 90
              +E+ T  +  E+ ++ + N      I+++ID +Y  F    Y   K      E   A
Sbjct: 188 LLLMEHKTSGIAKELIRNTRWNRTTGDIIEQVIDAMYTMFLGLNYSDNKVAEKIEEQEKA 247

Query: 89  LNHLEKLSICDMCYFENYACEFSKYFY 9
              + KL +CD+CY E + C++ K  Y
Sbjct: 248 KIRMTKLQLCDICYLEEFTCDYEKNMY 274


>dbj|BAO53574.1| capsid protein [Cauliflower mosaic virus]
          Length = 489

 Score = 63.2 bits (152), Expect = 3e-07
 Identities = 39/147 (26%), Positives = 68/147 (46%), Gaps = 2/147 (1%)
 Frame = -2

Query: 443 IPKKQGNRIAILDLDCTLEPKKLIDAWYSDIMISMIINKEIHRSKTNSWSYVIASTRGNV 264
           IP ++   I +L++DC    + LID W ++I + +         KTN   Y+   T   +
Sbjct: 138 IPGQKQTTIGMLNIDCQANRRTLIDDWAAEIGLIV---------KTNREDYLDPET---I 185

Query: 263 RAYLENFTYDVKNEIWKDCQANNPA--FIKRIIDQIYKQFTRQTYEAFKSKRSTIEVSDA 90
              +E+ T  +  E+ ++ + N      I+++ID +Y  F    Y   K      E   A
Sbjct: 186 LLLMEHKTSGIAKELIRNTRWNRTTGDIIEQVIDAMYTMFLGLNYSDNKVAEKIEEQEKA 245

Query: 89  LNHLEKLSICDMCYFENYACEFSKYFY 9
              + KL +CD+CY E + C++ K  Y
Sbjct: 246 KIRMTKLQLCDICYLEEFTCDYEKNMY 272


>dbj|BAO53560.1| capsid protein [Cauliflower mosaic virus]
          Length = 491

 Score = 63.2 bits (152), Expect = 3e-07
 Identities = 39/147 (26%), Positives = 68/147 (46%), Gaps = 2/147 (1%)
 Frame = -2

Query: 443 IPKKQGNRIAILDLDCTLEPKKLIDAWYSDIMISMIINKEIHRSKTNSWSYVIASTRGNV 264
           IP ++   I +L++DC    + LID W ++I + +         KTN   Y+   T   +
Sbjct: 140 IPGQKQTTIGMLNIDCQANRRTLIDDWAAEIGLIV---------KTNREDYLDPET---I 187

Query: 263 RAYLENFTYDVKNEIWKDCQANNPA--FIKRIIDQIYKQFTRQTYEAFKSKRSTIEVSDA 90
              +E+ T  +  E+ ++ + N      I+++ID +Y  F    Y   K      E   A
Sbjct: 188 LLLMEHKTSGIAKELIRNTRWNRTTGDIIEQVIDAMYTMFLGLNYSDNKVAEKIEEQEKA 247

Query: 89  LNHLEKLSICDMCYFENYACEFSKYFY 9
              + KL +CD+CY E + C++ K  Y
Sbjct: 248 KIRMTKLQLCDICYLEEFTCDYEKNMY 274


>dbj|BAO53455.1| capsid protein [Cauliflower mosaic virus]
          Length = 490

 Score = 63.2 bits (152), Expect = 3e-07
 Identities = 39/147 (26%), Positives = 68/147 (46%), Gaps = 2/147 (1%)
 Frame = -2

Query: 443 IPKKQGNRIAILDLDCTLEPKKLIDAWYSDIMISMIINKEIHRSKTNSWSYVIASTRGNV 264
           IP ++   I +L++DC    + LID W ++I + +         KTN   Y+   T   +
Sbjct: 139 IPGQKQTTIGMLNIDCQANRRTLIDDWAAEIGLIV---------KTNREDYLDPET---I 186

Query: 263 RAYLENFTYDVKNEIWKDCQANNPA--FIKRIIDQIYKQFTRQTYEAFKSKRSTIEVSDA 90
              +E+ T  +  E+ ++ + N      I+++ID +Y  F    Y   K      E   A
Sbjct: 187 LLLMEHKTSGIAKELIRNTRWNRTTGDIIEQVIDAMYTMFLGLNYSDNKVAEKIEEQEKA 246

Query: 89  LNHLEKLSICDMCYFENYACEFSKYFY 9
              + KL +CD+CY E + C++ K  Y
Sbjct: 247 KIRMTKLQLCDICYLEEFTCDYEKNMY 273


>sp|Q02951.1|CAPSD_CAMVE RecName: Full=Capsid protein; Short=CP; AltName: Full=Coat protein
           [Cauliflower mosaic virus (STRAIN BBC)]
           gi|293184|gb|AAA62374.1| capsid protein [Cauliflower
           mosaic virus]
          Length = 488

 Score = 63.2 bits (152), Expect = 3e-07
 Identities = 39/147 (26%), Positives = 68/147 (46%), Gaps = 2/147 (1%)
 Frame = -2

Query: 443 IPKKQGNRIAILDLDCTLEPKKLIDAWYSDIMISMIINKEIHRSKTNSWSYVIASTRGNV 264
           IP ++   + IL++DC    + LID W ++I + +         KTN   Y+   T   +
Sbjct: 138 IPGQKQTSMGILNIDCQTNRRTLIDDWAAEIGLIV---------KTNREDYLDPET---I 185

Query: 263 RAYLENFTYDVKNEIWKDCQANNPA--FIKRIIDQIYKQFTRQTYEAFKSKRSTIEVSDA 90
              +E+ T  +  E+ ++ + N      I+++ID +Y  F    Y   K      E   A
Sbjct: 186 LLLMEHKTSGIAKELIRNTRWNRTTGDIIEQVIDAMYTMFLGLNYSDNKVAEKIDEQEKA 245

Query: 89  LNHLEKLSICDMCYFENYACEFSKYFY 9
              + KL +CD+CY E + C++ K  Y
Sbjct: 246 KIRMTKLQLCDICYLEEFTCDYEKNMY 272


>gb|AFI61741.1| capsid protein [Cauliflower mosaic virus]
          Length = 487

 Score = 63.2 bits (152), Expect = 3e-07
 Identities = 39/147 (26%), Positives = 68/147 (46%), Gaps = 2/147 (1%)
 Frame = -2

Query: 443 IPKKQGNRIAILDLDCTLEPKKLIDAWYSDIMISMIINKEIHRSKTNSWSYVIASTRGNV 264
           IP ++   I +L++DC    + LID W ++I + +         KTN   Y+   T   +
Sbjct: 138 IPGQKQTSIGMLNIDCQANRRTLIDDWAAEIGLIV---------KTNREDYLDPET---I 185

Query: 263 RAYLENFTYDVKNEIWKDCQANNPA--FIKRIIDQIYKQFTRQTYEAFKSKRSTIEVSDA 90
              +E+ T  +  E+ ++ + N      I+++ID +Y  F    Y   K      E   A
Sbjct: 186 LLLMEHKTSGIAKELIRNTRWNRTTGDIIEQVIDAMYTMFLGLNYSDNKVAEKIEEQEKA 245

Query: 89  LNHLEKLSICDMCYFENYACEFSKYFY 9
              + KL +CD+CY E + C++ K  Y
Sbjct: 246 KIRMTKLQLCDICYLEEFTCDYEKNMY 272


>ref|YP_002519386.1| putative capsid protein [Rudbeckia flower distortion virus]
           gi|219815609|gb|ACL36981.1| putative capsid protein
           [Rudbeckia flower distortion virus]
          Length = 541

 Score = 62.8 bits (151), Expect = 3e-07
 Identities = 27/141 (19%), Positives = 69/141 (48%)
 Frame = -2

Query: 431 QGNRIAILDLDCTLEPKKLIDAWYSDIMISMIINKEIHRSKTNSWSYVIASTRGNVRAYL 252
           + + +++L++DC +   + ID W +   + ++ N+ +  +  N+W+++     GN+  Y+
Sbjct: 173 KNSTLSVLNIDCIVNKAQAIDDWIAATDVMILTNEGLRNNIKNAWAFITHLVSGNITEYI 232

Query: 251 ENFTYDVKNEIWKDCQANNPAFIKRIIDQIYKQFTRQTYEAFKSKRSTIEVSDALNHLEK 72
                + K +++++ +  +   ++     +Y  F     +    +    +  +A+  L  
Sbjct: 233 NRLNEEQKKKLFEESKDGHD-LLRLFRAALYAAFLGIDIKNNPEEAQLKKEENAMWRLNN 291

Query: 71  LSICDMCYFENYACEFSKYFY 9
           + I D+C  + + CEF KYFY
Sbjct: 292 ICISDLCLLDEFHCEFEKYFY 312


>gb|AGT42111.1| coat protein [Cauliflower mosaic virus]
           gi|591288465|dbj|BAO53294.1| capsid protein [Cauliflower
           mosaic virus]
          Length = 489

 Score = 62.8 bits (151), Expect = 3e-07
 Identities = 38/147 (25%), Positives = 68/147 (46%), Gaps = 2/147 (1%)
 Frame = -2

Query: 443 IPKKQGNRIAILDLDCTLEPKKLIDAWYSDIMISMIINKEIHRSKTNSWSYVIASTRGNV 264
           IP ++   + +L++DC    + LID W ++I + +         KTN   Y+   T   +
Sbjct: 138 IPGQKQTTVGMLNIDCQANRRTLIDDWAAEIGLIV---------KTNREDYLDPET---I 185

Query: 263 RAYLENFTYDVKNEIWKDCQANNPA--FIKRIIDQIYKQFTRQTYEAFKSKRSTIEVSDA 90
              +E+ T  +  E+ ++ + N      I+++ID +Y  F    Y   K      E   A
Sbjct: 186 LLLMEHKTSGIAKELIRNTRWNRTTGDIIEQVIDAMYTMFLGLNYSDNKVAEKIEEQEKA 245

Query: 89  LNHLEKLSICDMCYFENYACEFSKYFY 9
              + KL +CD+CY E + C++ K  Y
Sbjct: 246 KIRMTKLQLCDICYLEEFTCDYEKNMY 272


>emb|CCK73153.1| coat protein, partial [Cauliflower mosaic virus]
          Length = 464

 Score = 62.8 bits (151), Expect = 3e-07
 Identities = 38/147 (25%), Positives = 69/147 (46%), Gaps = 2/147 (1%)
 Frame = -2

Query: 443 IPKKQGNRIAILDLDCTLEPKKLIDAWYSDIMISMIINKEIHRSKTNSWSYVIASTRGNV 264
           IP ++   + +L++DC +  + LID W ++I + +         KTN   Y+   T   +
Sbjct: 132 IPGQKQTTMGMLNIDCQVNRRTLIDDWAAEIGLIV---------KTNREDYLDPET---I 179

Query: 263 RAYLENFTYDVKNEIWKDCQANNPA--FIKRIIDQIYKQFTRQTYEAFKSKRSTIEVSDA 90
              +E+ T  +  E+ ++ + N      I+++ID +Y  F    Y   K      E   A
Sbjct: 180 LLLMEHKTSGIAKELIRNTRWNRTTGDIIEQVIDAMYTMFLGLNYSDNKVAEKIEEQEKA 239

Query: 89  LNHLEKLSICDMCYFENYACEFSKYFY 9
              + KL +CD+CY E + C++ K  Y
Sbjct: 240 KIRMTKLQLCDICYLEEFTCDYEKNMY 266


>gb|AKB94070.1| ORF IV protein [Strawberry vein banding virus]
          Length = 471

 Score = 62.4 bits (150), Expect = 4e-07
 Identities = 42/151 (27%), Positives = 71/151 (47%), Gaps = 6/151 (3%)
 Frame = -2

Query: 458 ISSDYIPKKQGN--RIAILDLDCTLEPKKLIDAWYSDIMISMIINKEIHRSKTNSWSYVI 285
           I S+YIP K+        LDLDC    ++LI+ W  D  + +II  E  ++ TN +  ++
Sbjct: 96  IPSEYIPNKKTGLTNTKSLDLDCASNRRQLIEEW--DNEMRLIIKTE--KALTNDFDLIL 151

Query: 284 ----ASTRGNVRAYLENFTYDVKNEIWKDCQANNPAFIKRIIDQIYKQFTRQTYEAFKSK 117
               + T GN +  LE+   D     +K   +    F+  + +  Y  F    Y    ++
Sbjct: 152 TLAKSKTVGNAKQLLESLHTDA----FKQASSTGEEFLTTLTNSFYTIFVGTNYLTQGTR 207

Query: 116 RSTIEVSDALNHLEKLSICDMCYFENYACEF 24
                V +A N L KL IC++C  E++ C++
Sbjct: 208 EKEKAVQEARNRLVKLQICNLCSLESFFCDY 238


>gb|AGT42181.1| coat protein [Cauliflower mosaic virus]
           gi|591288441|dbj|BAO53273.1| capsid protein [Cauliflower
           mosaic virus]
          Length = 489

 Score = 62.4 bits (150), Expect = 4e-07
 Identities = 38/147 (25%), Positives = 68/147 (46%), Gaps = 2/147 (1%)
 Frame = -2

Query: 443 IPKKQGNRIAILDLDCTLEPKKLIDAWYSDIMISMIINKEIHRSKTNSWSYVIASTRGNV 264
           IP ++   + +L++DC    + LID W ++I + +         KTN   Y+   T   +
Sbjct: 138 IPGQKQTTMGMLNIDCQANRRTLIDDWAAEIGLIV---------KTNKEDYLDPET---I 185

Query: 263 RAYLENFTYDVKNEIWKDCQANNPA--FIKRIIDQIYKQFTRQTYEAFKSKRSTIEVSDA 90
              +E+ T  +  E+ ++ + N      I+++ID +Y  F    Y   K      E   A
Sbjct: 186 LLLMEHKTSGIAKELIRNTRWNRTTGDIIEQVIDAMYTMFLGLNYSDNKVAEKIEEQEKA 245

Query: 89  LNHLEKLSICDMCYFENYACEFSKYFY 9
              + KL +CD+CY E + C++ K  Y
Sbjct: 246 KIRMTKLQLCDICYLEEFTCDYEKNMY 272


>sp|P03544.1|CAPSD_CAMVD RecName: Full=Capsid protein; Short=CP; AltName: Full=Coat protein
           [Cauliflower mosaic virus (STRAIN D/H)]
           gi|331547|gb|AAA46348.1| coat protein (gene IV)
           [Cauliflower mosaic virus]
          Length = 490

 Score = 62.0 bits (149), Expect = 6e-07
 Identities = 38/147 (25%), Positives = 68/147 (46%), Gaps = 2/147 (1%)
 Frame = -2

Query: 443 IPKKQGNRIAILDLDCTLEPKKLIDAWYSDIMISMIINKEIHRSKTNSWSYVIASTRGNV 264
           IP ++   + +L++DC    + LID W ++I + +         KTN   Y+   T   +
Sbjct: 139 IPGQKQTTMGMLNIDCQANRRTLIDDWAAEIGLIV---------KTNREDYLDPET---I 186

Query: 263 RAYLENFTYDVKNEIWKDCQANNPA--FIKRIIDQIYKQFTRQTYEAFKSKRSTIEVSDA 90
              +E+ T  +  E+ ++ + N      I+++ID +Y  F    Y   K      E   A
Sbjct: 187 LLLMEHKTSGIAKELIRNTRWNRTTGDIIEQVIDAMYTMFLGLNYSDNKVAEKIEEQEKA 246

Query: 89  LNHLEKLSICDMCYFENYACEFSKYFY 9
              + KL +CD+CY E + C++ K  Y
Sbjct: 247 KIRMTKLQLCDICYLEEFTCDYEKNMY 273


>gb|AII80285.1| capsid protein [Cauliflower mosaic virus]
          Length = 490

 Score = 62.0 bits (149), Expect = 6e-07
 Identities = 38/147 (25%), Positives = 68/147 (46%), Gaps = 2/147 (1%)
 Frame = -2

Query: 443 IPKKQGNRIAILDLDCTLEPKKLIDAWYSDIMISMIINKEIHRSKTNSWSYVIASTRGNV 264
           IP ++   + +L++DC    + LID W ++I + +         KTN   Y+   T   +
Sbjct: 139 IPGQKQTTMGMLNIDCQANRRTLIDDWAAEIGLIV---------KTNREDYLDPET---I 186

Query: 263 RAYLENFTYDVKNEIWKDCQANNPA--FIKRIIDQIYKQFTRQTYEAFKSKRSTIEVSDA 90
              +E+ T  +  E+ ++ + N      I+++ID +Y  F    Y   K      E   A
Sbjct: 187 LLLMEHKTSGIAKELIRNTRWNRTTGDIIEQVIDAMYTMFLGLNYSDNKVAEKIEEQEKA 246

Query: 89  LNHLEKLSICDMCYFENYACEFSKYFY 9
              + KL +CD+CY E + C++ K  Y
Sbjct: 247 KIRMTKLQLCDICYLEEFTCDYEKNMY 273


>gb|AII00789.1| capsid protein [Cauliflower mosaic virus]
          Length = 490

 Score = 62.0 bits (149), Expect = 6e-07
 Identities = 38/147 (25%), Positives = 68/147 (46%), Gaps = 2/147 (1%)
 Frame = -2

Query: 443 IPKKQGNRIAILDLDCTLEPKKLIDAWYSDIMISMIINKEIHRSKTNSWSYVIASTRGNV 264
           IP ++   + +L++DC    + LID W ++I + +         KTN   Y+   T   +
Sbjct: 139 IPGQKQTTMGMLNIDCQANRRTLIDDWAAEIGLIV---------KTNREDYLDPET---I 186

Query: 263 RAYLENFTYDVKNEIWKDCQANNPA--FIKRIIDQIYKQFTRQTYEAFKSKRSTIEVSDA 90
              +E+ T  +  E+ ++ + N      I+++ID +Y  F    Y   K      E   A
Sbjct: 187 LLLMEHKTSGIAKELIRNTRWNRTTGDIIEQVIDAMYTMFLGLNYSDNKVAEKIEEQEKA 246

Query: 89  LNHLEKLSICDMCYFENYACEFSKYFY 9
              + KL +CD+CY E + C++ K  Y
Sbjct: 247 KIRMTKLQLCDICYLEEFTCDYEKNMY 273