BLASTX nr result

ID: Forsythia21_contig00027851 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Forsythia21_contig00027851
         (236 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004250726.1| PREDICTED: signal recognition particle recep...    59   2e-06
ref|XP_006349023.1| PREDICTED: signal recognition particle recep...    58   2e-06
ref|XP_011086593.1| PREDICTED: signal recognition particle recep...    58   3e-06
ref|XP_009598790.1| PREDICTED: signal recognition particle recep...    56   8e-06

>ref|XP_004250726.1| PREDICTED: signal recognition particle receptor subunit beta
           [Solanum lycopersicum] gi|723743961|ref|XP_010313066.1|
           PREDICTED: signal recognition particle receptor subunit
           beta [Solanum lycopersicum]
          Length = 261

 Score = 58.5 bits (140), Expect = 2e-06
 Identities = 23/34 (67%), Positives = 31/34 (91%)
 Frame = +2

Query: 134 MDKEKIEELKIQTQKWLNEAQEFIQKVPPIQIYS 235
           MDKEK+E+LKIQ Q+WLNEA+EFI  +PP+Q+Y+
Sbjct: 1   MDKEKVEQLKIQMQQWLNEAEEFINHIPPVQLYT 34


>ref|XP_006349023.1| PREDICTED: signal recognition particle receptor subunit beta-like
           isoform X1 [Solanum tuberosum]
           gi|565364633|ref|XP_006349024.1| PREDICTED: signal
           recognition particle receptor subunit beta-like isoform
           X2 [Solanum tuberosum] gi|565364635|ref|XP_006349025.1|
           PREDICTED: signal recognition particle receptor subunit
           beta-like isoform X3 [Solanum tuberosum]
          Length = 261

 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 23/34 (67%), Positives = 31/34 (91%)
 Frame = +2

Query: 134 MDKEKIEELKIQTQKWLNEAQEFIQKVPPIQIYS 235
           MDKEK+E+LKI TQ+WLNEA+EFI  +PP+Q+Y+
Sbjct: 1   MDKEKVEQLKILTQQWLNEAEEFINHIPPVQLYT 34


>ref|XP_011086593.1| PREDICTED: signal recognition particle receptor subunit beta-like
           [Sesamum indicum] gi|747078834|ref|XP_011086594.1|
           PREDICTED: signal recognition particle receptor subunit
           beta-like [Sesamum indicum]
          Length = 261

 Score = 57.8 bits (138), Expect = 3e-06
 Identities = 23/34 (67%), Positives = 32/34 (94%)
 Frame = +2

Query: 134 MDKEKIEELKIQTQKWLNEAQEFIQKVPPIQIYS 235
           MDKEK+EE+KIQ Q+WLNEAQEF++++PP Q+Y+
Sbjct: 1   MDKEKLEEVKIQLQQWLNEAQEFVREIPPPQLYA 34


>ref|XP_009598790.1| PREDICTED: signal recognition particle receptor subunit beta-like
           [Nicotiana tomentosiformis]
           gi|697179628|ref|XP_009598791.1| PREDICTED: signal
           recognition particle receptor subunit beta-like
           [Nicotiana tomentosiformis]
          Length = 261

 Score = 56.2 bits (134), Expect = 8e-06
 Identities = 22/34 (64%), Positives = 31/34 (91%)
 Frame = +2

Query: 134 MDKEKIEELKIQTQKWLNEAQEFIQKVPPIQIYS 235
           MDKEK+E+LKIQ Q+WL+EA+EFI + PP+Q+Y+
Sbjct: 1   MDKEKVEQLKIQMQQWLHEAEEFIHQTPPVQLYT 34


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