BLASTX nr result
ID: Forsythia21_contig00025831
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Forsythia21_contig00025831
(575 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAJ09951.2| putative gag-pol polyprotein [Citrus sinensis] 68 6e-13
emb|CAN75921.1| hypothetical protein VITISV_030750 [Vitis vinifera] 61 5e-10
gb|AAD19773.1| putative retroelement pol polyprotein [Arabidopsi... 57 9e-10
emb|CAN72704.1| hypothetical protein VITISV_016225 [Vitis vinifera] 67 4e-09
gb|KHN13665.1| Retrovirus-related Pol polyprotein from transposo... 59 2e-08
gb|ABA91380.1| retrotransposon protein, putative, Ty1-copia subc... 62 3e-08
emb|CAN70013.1| hypothetical protein VITISV_017116 [Vitis vinifera] 65 3e-08
gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group] 61 3e-08
emb|CAN80490.1| hypothetical protein VITISV_004703 [Vitis vinifera] 63 1e-07
emb|CAN67309.1| hypothetical protein VITISV_028165 [Vitis vinifera] 57 1e-07
ref|XP_010692517.1| PREDICTED: uncharacterized protein LOC104905... 62 1e-07
gb|AAX96781.1| retrotransposon protein, putative, Ty1-copia sub-... 62 1e-07
emb|CAN84102.1| hypothetical protein VITISV_041248 [Vitis vinifera] 62 1e-07
gb|KHN13199.1| Retrovirus-related Pol polyprotein from transposo... 62 2e-07
gb|KHN13198.1| Retrovirus-related Pol polyprotein from transposo... 62 2e-07
ref|XP_011073037.1| PREDICTED: retrovirus-related Pol polyprotei... 54 2e-07
gb|AAR13295.1| retrovirus-related pol polyprotein [Phaseolus vul... 59 2e-07
emb|CDN96898.1| putative Ty-1 copia retrotransposon [Phaseolus v... 59 3e-07
emb|CAN63293.1| hypothetical protein VITISV_025722 [Vitis vinifera] 57 5e-07
emb|CAJ86192.1| H0306F03.15 [Oryza sativa Indica Group] 60 5e-07
>emb|CAJ09951.2| putative gag-pol polyprotein [Citrus sinensis]
Length = 1334
Score = 67.8 bits (164), Expect(2) = 6e-13
Identities = 34/86 (39%), Positives = 53/86 (61%), Gaps = 2/86 (2%)
Frame = +1
Query: 292 KRKGENRGWDRRTALAYDEANAN--PGKVYVASSNQTGLEWIPDSGCKFHVCPIKDLFCN 465
K+K E++ A+A D+ + + VAS++ T +W+ DSGC FH+CP K LF
Sbjct: 252 KKKKESQEKSGDAAVASDDGSDGYQSADLLVASNSNTKGQWVIDSGCSFHLCPEKTLFYK 311
Query: 466 FEKINGGQVLMGNDMSCGVKG*VQFC 543
+E ++GG+VLMGN+ C + G + FC
Sbjct: 312 YEAVDGGRVLMGNNNVCNIVG-IWFC 336
Score = 32.7 bits (73), Expect(2) = 6e-13
Identities = 10/18 (55%), Positives = 16/18 (88%)
Frame = +2
Query: 227 KCFFYGKEGHFIKDCYKR 280
KCF+ KEGH+I+DC+++
Sbjct: 235 KCFYCRKEGHYIRDCFEK 252
>emb|CAN75921.1| hypothetical protein VITISV_030750 [Vitis vinifera]
Length = 437
Score = 60.8 bits (146), Expect(2) = 5e-10
Identities = 25/45 (55%), Positives = 33/45 (73%)
Frame = +1
Query: 394 TGLEWIPDSGCKFHVCPIKDLFCNFEKINGGQVLMGNDMSCGVKG 528
+G EWI DSGC FH+CPIK F NF++ +GG VL+GN+ C + G
Sbjct: 114 SGKEWILDSGCSFHMCPIKAWFENFKEADGGHVLLGNNKHCKILG 158
Score = 29.6 bits (65), Expect(2) = 5e-10
Identities = 12/18 (66%), Positives = 12/18 (66%)
Frame = +2
Query: 227 KCFFYGKEGHFIKDCYKR 280
KCF KEGHF KDC R
Sbjct: 63 KCFICHKEGHFNKDCPNR 80
>gb|AAD19773.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1335
Score = 57.4 bits (137), Expect(2) = 9e-10
Identities = 31/90 (34%), Positives = 51/90 (56%), Gaps = 6/90 (6%)
Frame = +1
Query: 277 EKSRIKRKGENRGWDRRTALAYDEANANPGKVYVAS------SNQTGLEWIPDSGCKFHV 438
E+++ K++G + G ++LA NP V +A+ ++ EW+ D+GC FH+
Sbjct: 239 ERNKSKQQGSDNG---ESSLAKSTEAFNPAMVLLATDETLVVTDSIANEWVLDTGCSFHM 295
Query: 439 CPIKDLFCNFEKINGGQVLMGNDMSCGVKG 528
P KD F +F++++ G V MGND VKG
Sbjct: 296 TPRKDWFKDFKELSSGYVKMGNDTYSPVKG 325
Score = 32.3 bits (72), Expect(2) = 9e-10
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = +2
Query: 206 KTIGGLSKCFFYGKEGHFIKDCYK 277
K+ G C+ GKEGHF K CYK
Sbjct: 213 KSADGKRVCWICGKEGHFKKQCYK 236
>emb|CAN72704.1| hypothetical protein VITISV_016225 [Vitis vinifera]
Length = 817
Score = 67.4 bits (163), Expect = 4e-09
Identities = 34/89 (38%), Positives = 50/89 (56%)
Frame = +1
Query: 262 KRLLQEKSRIKRKGENRGWDRRTALAYDEANANPGKVYVASSNQTGLEWIPDSGCKFHVC 441
+R+ +K + K + +G YD A KV + NQ EW+ DSGC +H+C
Sbjct: 5 RRICPDKQEEEEKPQAQGSFSIIDDGYDSA-----KVLTITLNQNHEEWVLDSGCTYHMC 59
Query: 442 PIKDLFCNFEKINGGQVLMGNDMSCGVKG 528
P D F ++++ NGG VL+GN+MSC V G
Sbjct: 60 PRIDWFSSYQEFNGGNVLLGNNMSCSVVG 88
>gb|KHN13665.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Glycine soja]
Length = 337
Score = 58.5 bits (140), Expect(2) = 2e-08
Identities = 30/80 (37%), Positives = 48/80 (60%), Gaps = 1/80 (1%)
Frame = +1
Query: 292 KRKGENRG-WDRRTALAYDEANANPGKVYVASSNQTGLEWIPDSGCKFHVCPIKDLFCNF 468
+RK +N G ++ + +A +V S+ + EWI DSGC FH+ P + F ++
Sbjct: 242 ERKKKNNGKYNDESDIAVVADGYESAEVLSISTKKHSEEWILDSGCSFHMTPNLEWFSSY 301
Query: 469 EKINGGQVLMGNDMSCGVKG 528
++I+GG+VLMGN+M C V G
Sbjct: 302 KEIDGGKVLMGNNMVCNVIG 321
Score = 26.6 bits (57), Expect(2) = 2e-08
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = +2
Query: 230 CFFYGKEGHFIKDCYKR 280
C++ KEGHF K+C +R
Sbjct: 227 CYYCKKEGHFRKECPER 243
>gb|ABA91380.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1138
Score = 61.6 bits (148), Expect(2) = 3e-08
Identities = 33/89 (37%), Positives = 48/89 (53%), Gaps = 3/89 (3%)
Frame = +1
Query: 271 LQEKSRIKRKGENRGW---DRRTALAYDEANANPGKVYVASSNQTGLEWIPDSGCKFHVC 441
LQ+K + RK +G + + A+ DE + V A QT +WI D+ C +H+C
Sbjct: 194 LQDKDKRTRKYIPKGKKEEEGKAAIVTDEKSDAELLVAYAGCAQTSDQWILDTACTYHMC 253
Query: 442 PIKDLFCNFEKINGGQVLMGNDMSCGVKG 528
P +D F +E + GG VLMG+D C V G
Sbjct: 254 PNRDWFATYEAVQGGTVLMGDDTPCEVAG 282
Score = 23.1 bits (48), Expect(2) = 3e-08
Identities = 8/24 (33%), Positives = 14/24 (58%)
Frame = +2
Query: 206 KTIGGLSKCFFYGKEGHFIKDCYK 277
K+ G C + ++GH I +C+K
Sbjct: 170 KSRGRYKSCKYCKRDGHDISECWK 193
>emb|CAN70013.1| hypothetical protein VITISV_017116 [Vitis vinifera]
Length = 947
Score = 64.7 bits (156), Expect = 3e-08
Identities = 36/108 (33%), Positives = 53/108 (49%)
Frame = +1
Query: 205 ENDRRSIKVLLLWKRRTLHKRLLQEKSRIKRKGENRGWDRRTALAYDEANANPGKVYVAS 384
+++ + K + K K ++ +K N G YD A KV +
Sbjct: 263 KSNTKKFKCFICHKEGHFKKDCSDKRQNTIKKTVNEGDAAVILDGYDSA-----KVLNVA 317
Query: 385 SNQTGLEWIPDSGCKFHVCPIKDLFCNFEKINGGQVLMGNDMSCGVKG 528
+G EWI DSGC FH+CPIK F +F++ NGG VL+GN+ C + G
Sbjct: 318 EMDSGKEWILDSGCSFHMCPIKAWFEDFKEANGGHVLLGNNKHCKILG 365
>gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1241
Score = 61.2 bits (147), Expect(2) = 3e-08
Identities = 33/89 (37%), Positives = 48/89 (53%), Gaps = 3/89 (3%)
Frame = +1
Query: 271 LQEKSRIKRKGENRGW---DRRTALAYDEANANPGKVYVASSNQTGLEWIPDSGCKFHVC 441
LQ+K + RK +G + + A+ DE + V A QT +WI D+ C +H+C
Sbjct: 161 LQDKDKRTRKYIPKGKKEEEGKAAVVTDEKSDAELLVAYAGCAQTSDQWILDTACTYHMC 220
Query: 442 PIKDLFCNFEKINGGQVLMGNDMSCGVKG 528
P +D F +E + GG VLMG+D C V G
Sbjct: 221 PNRDWFATYEAVQGGTVLMGDDTPCEVAG 249
Score = 23.1 bits (48), Expect(2) = 3e-08
Identities = 8/24 (33%), Positives = 14/24 (58%)
Frame = +2
Query: 206 KTIGGLSKCFFYGKEGHFIKDCYK 277
K+ G C + ++GH I +C+K
Sbjct: 137 KSRGRYKSCKYCKRDGHDISECWK 160
>emb|CAN80490.1| hypothetical protein VITISV_004703 [Vitis vinifera]
Length = 777
Score = 62.8 bits (151), Expect = 1e-07
Identities = 22/42 (52%), Positives = 35/42 (83%)
Frame = +1
Query: 403 EWIPDSGCKFHVCPIKDLFCNFEKINGGQVLMGNDMSCGVKG 528
EW+ DSGC +H+CP +D F +++++NGG++L+GN+MSC V G
Sbjct: 177 EWVLDSGCTYHMCPRRDWFSSYQEVNGGKLLLGNNMSCNVVG 218
>emb|CAN67309.1| hypothetical protein VITISV_028165 [Vitis vinifera]
Length = 344
Score = 57.4 bits (137), Expect(2) = 1e-07
Identities = 31/84 (36%), Positives = 46/84 (54%), Gaps = 1/84 (1%)
Frame = +1
Query: 280 KSRIKRKG-ENRGWDRRTALAYDEANANPGKVYVASSNQTGLEWIPDSGCKFHVCPIKDL 456
K+ RKG EN+ + + N+N V + + EWI DSGC +H+ P D
Sbjct: 192 KNXPDRKGKENKRNYNSGDATFAKENSNTTDVLLVXVTNSDDEWILDSGCSYHMSPNGDW 251
Query: 457 FCNFEKINGGQVLMGNDMSCGVKG 528
F ++ I+GG+VLMGN ++C V G
Sbjct: 252 FSTYQPIDGGKVLMGNKVACKVVG 275
Score = 25.0 bits (53), Expect(2) = 1e-07
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = +2
Query: 218 GLSKCFFYGKEGHFIKD 268
G +KCF KEGH++K+
Sbjct: 177 GNNKCFKCKKEGHYVKN 193
>ref|XP_010692517.1| PREDICTED: uncharacterized protein LOC104905624 [Beta vulgaris
subsp. vulgaris]
Length = 2676
Score = 62.4 bits (150), Expect = 1e-07
Identities = 29/65 (44%), Positives = 42/65 (64%)
Frame = +1
Query: 334 LAYDEANANPGKVYVASSNQTGLEWIPDSGCKFHVCPIKDLFCNFEKINGGQVLMGNDMS 513
++Y + ++ G + V+ S EWI DSGC FHV P KD+F ++E+ NGG V MGN+ +
Sbjct: 273 VSYVDFDSESGALDVSKS-----EWIMDSGCSFHVTPYKDMFTSYEEFNGGTVTMGNNAT 327
Query: 514 CGVKG 528
C V G
Sbjct: 328 CKVVG 332
>gb|AAX96781.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza
sativa Japonica Group] gi|77549746|gb|ABA92543.1|
retrotransposon protein, putative, Ty1-copia subclass,
expressed [Oryza sativa Japonica Group]
Length = 1170
Score = 62.4 bits (150), Expect = 1e-07
Identities = 37/96 (38%), Positives = 49/96 (51%)
Frame = +1
Query: 241 WKRRTLHKRLLQEKSRIKRKGENRGWDRRTALAYDEANANPGKVYVASSNQTGLEWIPDS 420
WK + KR EK K K E G + A+ DE + V A QT +WI D+
Sbjct: 202 WKLQDKDKRT--EKYISKGKKEEEG---KAAVVTDEKSDAELLVAYADCAQTSDQWILDT 256
Query: 421 GCKFHVCPIKDLFCNFEKINGGQVLMGNDMSCGVKG 528
C +H+CP +D F +E + GG VLMG+D GV G
Sbjct: 257 ACTYHMCPNRDWFATYEAVQGGTVLMGDDTPFGVAG 292
>emb|CAN84102.1| hypothetical protein VITISV_041248 [Vitis vinifera]
Length = 894
Score = 62.4 bits (150), Expect = 1e-07
Identities = 37/104 (35%), Positives = 51/104 (49%)
Frame = +1
Query: 217 RSIKVLLLWKRRTLHKRLLQEKSRIKRKGENRGWDRRTALAYDEANANPGKVYVASSNQT 396
+ K + K K + +K N G YD N G + VA + +
Sbjct: 224 KKFKCFICHKEGHFKKDCPDMRQNTXKKTMNEGDATMILDGYD----NAGVLNVAEVD-S 278
Query: 397 GLEWIPDSGCKFHVCPIKDLFCNFEKINGGQVLMGNDMSCGVKG 528
G EWI DSGC FH+CPIK F +F++ NGG VL+GN+ C + G
Sbjct: 279 GKEWILDSGCSFHMCPIKAWFEDFKEANGGHVLLGNNKHCKILG 322
>gb|KHN13199.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Glycine soja]
Length = 344
Score = 61.6 bits (148), Expect(2) = 2e-07
Identities = 26/55 (47%), Positives = 35/55 (63%)
Frame = +1
Query: 364 GKVYVASSNQTGLEWIPDSGCKFHVCPIKDLFCNFEKINGGQVLMGNDMSCGVKG 528
G V SSN +WI DS C FH+ P +D F F+ ++GG+VLMGND +C + G
Sbjct: 269 GNVLFVSSNVNDDDWILDSACTFHMTPNRDWFATFQNVDGGKVLMGNDGACSIAG 323
Score = 20.4 bits (41), Expect(2) = 2e-07
Identities = 7/16 (43%), Positives = 11/16 (68%)
Frame = +2
Query: 224 SKCFFYGKEGHFIKDC 271
+KC KEGH+ ++C
Sbjct: 228 NKCHNCQKEGHWKRNC 243
>gb|KHN13198.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Glycine soja]
Length = 341
Score = 61.6 bits (148), Expect(2) = 2e-07
Identities = 26/55 (47%), Positives = 35/55 (63%)
Frame = +1
Query: 364 GKVYVASSNQTGLEWIPDSGCKFHVCPIKDLFCNFEKINGGQVLMGNDMSCGVKG 528
G V SSN +WI DS C FH+ P +D F F+ ++GG+VLMGND +C + G
Sbjct: 266 GNVLFVSSNVNDDDWILDSACTFHMTPNRDWFATFQNVDGGKVLMGNDGACSIAG 320
Score = 20.4 bits (41), Expect(2) = 2e-07
Identities = 7/16 (43%), Positives = 11/16 (68%)
Frame = +2
Query: 224 SKCFFYGKEGHFIKDC 271
+KC KEGH+ ++C
Sbjct: 225 NKCHNCQKEGHWKRNC 240
>ref|XP_011073037.1| PREDICTED: retrovirus-related Pol polyprotein from transposon TNT
1-94 [Sesamum indicum]
Length = 472
Score = 54.3 bits (129), Expect(2) = 2e-07
Identities = 30/83 (36%), Positives = 46/83 (55%), Gaps = 4/83 (4%)
Frame = +1
Query: 292 KRKGENRGWDRRTALAYD--EANANPGKVYVASSNQTG--LEWIPDSGCKFHVCPIKDLF 459
+R+ +R +D + ++ E+N VY A+S T EW+ DSGC FH+ P KD+F
Sbjct: 259 RRENRDRNYDDKEKVSNVSIESNGEVFVVYEANSVSTFDMHEWLIDSGCTFHMSPFKDIF 318
Query: 460 CNFEKINGGQVLMGNDMSCGVKG 528
N + + G V M N+ C +KG
Sbjct: 319 TNLKYEHAGFVSMANEKKCEIKG 341
Score = 27.3 bits (59), Expect(2) = 2e-07
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = +2
Query: 227 KCFFYGKEGHFIKDCYK 277
+C+ G +GH+IKDC K
Sbjct: 241 RCYNCGTKGHYIKDCRK 257
>gb|AAR13295.1| retrovirus-related pol polyprotein [Phaseolus vulgaris]
Length = 324
Score = 59.3 bits (142), Expect(2) = 2e-07
Identities = 28/78 (35%), Positives = 42/78 (53%)
Frame = +1
Query: 295 RKGENRGWDRRTALAYDEANANPGKVYVASSNQTGLEWIPDSGCKFHVCPIKDLFCNFEK 474
+K E D A + ++ + S++ EWI DSGC +H+CPI+D F F++
Sbjct: 227 QKKEKVPQDANVAECKSDVESDISLIVSLSASSYPDEWILDSGCTYHMCPIRDWFFEFQE 286
Query: 475 INGGQVLMGNDMSCGVKG 528
++GG V MGND C G
Sbjct: 287 LDGGVVYMGNDNPCKTAG 304
Score = 22.3 bits (46), Expect(2) = 2e-07
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = +2
Query: 227 KCFFYGKEGHFIKDCYK 277
+C F ++GH+ KDC K
Sbjct: 209 ECAFCHEKGHWKKDCPK 225
>emb|CDN96898.1| putative Ty-1 copia retrotransposon [Phaseolus vulgaris]
Length = 813
Score = 58.9 bits (141), Expect(2) = 3e-07
Identities = 28/78 (35%), Positives = 42/78 (53%)
Frame = +1
Query: 295 RKGENRGWDRRTALAYDEANANPGKVYVASSNQTGLEWIPDSGCKFHVCPIKDLFCNFEK 474
+K E D A + ++ + S++ EWI DSGC +H+CPI+D F F++
Sbjct: 187 QKKEKVPQDANVAECKSDVESDISLIVSLSASSYPDEWILDSGCTYHMCPIRDWFFEFQE 246
Query: 475 INGGQVLMGNDMSCGVKG 528
++GG V MGND C G
Sbjct: 247 LDGGVVYMGNDNPCKTVG 264
Score = 22.3 bits (46), Expect(2) = 3e-07
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = +2
Query: 227 KCFFYGKEGHFIKDCYK 277
+C F ++GH+ KDC K
Sbjct: 169 ECAFCHEKGHWKKDCPK 185
>emb|CAN63293.1| hypothetical protein VITISV_025722 [Vitis vinifera]
Length = 347
Score = 57.4 bits (137), Expect(2) = 5e-07
Identities = 31/91 (34%), Positives = 49/91 (53%), Gaps = 4/91 (4%)
Frame = +1
Query: 262 KRLLQEKSRIKRKGENRGWDRRTA--LAYDEANANPGKVYVASSNQTGL--EWIPDSGCK 429
KR EK + EN+ ++A + +++ + G + SS+ L WI DS C
Sbjct: 133 KRDCPEKKKRGSVSENKEGSSKSANVVTEEDSESGDGDMLSVSSSSDHLTDSWILDSTCS 192
Query: 430 FHVCPIKDLFCNFEKINGGQVLMGNDMSCGV 522
+H+ P KD F + +N G +LMG+D+SCGV
Sbjct: 193 YHMTPNKDWFNTYRSVNSGSILMGSDVSCGV 223
Score = 23.1 bits (48), Expect(2) = 5e-07
Identities = 7/15 (46%), Positives = 11/15 (73%)
Frame = +2
Query: 227 KCFFYGKEGHFIKDC 271
+C+ GK+GH +DC
Sbjct: 122 QCYKCGKKGHMKRDC 136
>emb|CAJ86192.1| H0306F03.15 [Oryza sativa Indica Group]
Length = 1037
Score = 60.5 bits (145), Expect = 5e-07
Identities = 36/96 (37%), Positives = 49/96 (51%)
Frame = +1
Query: 241 WKRRTLHKRLLQEKSRIKRKGENRGWDRRTALAYDEANANPGKVYVASSNQTGLEWIPDS 420
WK + KR K K K E+ G + A+ DE + V A QT +WI D+
Sbjct: 67 WKLQDKDKRT--GKYIPKGKKEDEG---KAAVVTDEKSDAELLVAYAGCAQTSDQWILDT 121
Query: 421 GCKFHVCPIKDLFCNFEKINGGQVLMGNDMSCGVKG 528
C +H+CP +D F +E + GG VLMG+D C V G
Sbjct: 122 ACTYHMCPNRDWFATYEVVQGGTVLMGDDTPCEVAG 157