BLASTX nr result
ID: Forsythia21_contig00025611
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Forsythia21_contig00025611
(419 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN65222.1| hypothetical protein VITISV_038665 [Vitis vinifera] 177 2e-42
emb|CAJ09951.2| putative gag-pol polyprotein [Citrus sinensis] 174 3e-41
gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|1337118... 172 8e-41
gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group] 172 8e-41
emb|CAJ86192.1| H0306F03.15 [Oryza sativa Indica Group] 172 1e-40
emb|CAJ86151.1| H0413E07.4 [Oryza sativa Indica Group] 172 1e-40
gb|AAM91886.1| putative polyprotein [Oryza sativa Japonica Group] 170 3e-40
gb|AAP54315.2| retrotransposon protein, putative, Ty1-copia subc... 170 3e-40
gb|AAT44257.1| putative polyprotein [Oryza sativa Japonica Group] 169 5e-40
gb|ABA99474.1| retrotransposon protein, putative, Ty1-copia subc... 169 7e-40
gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-... 169 7e-40
ref|XP_010676254.1| PREDICTED: uncharacterized protein LOC104892... 168 1e-39
gb|AAT44282.1| putative polyprotein [Oryza sativa Japonica Group] 168 1e-39
emb|CAD40121.3| OSJNBa0061C06.5 [Oryza sativa Japonica Group] 168 1e-39
gb|ABA97637.1| retrotransposon protein, putative, Ty1-copia subc... 167 3e-39
gb|ACS74199.1| putative gag-pol polyprotein [Fragaria x ananassa] 167 3e-39
gb|AAR87163.1| putative polyprotein [Oryza sativa Japonica Group... 164 2e-38
emb|CAI44659.1| OSJNBa0061C06.9 [Oryza sativa Japonica Group] 164 3e-38
dbj|BAB09923.1| copia-like retrotransposable element [Arabidopsi... 163 5e-38
gb|AAL91607.1|AC099400_13 Putative pol polyprotein [Oryza sativa... 162 6e-38
>emb|CAN65222.1| hypothetical protein VITISV_038665 [Vitis vinifera]
Length = 1562
Score = 177 bits (450), Expect = 2e-42
Identities = 82/134 (61%), Positives = 109/134 (81%)
Frame = +2
Query: 2 LKEGVEPNDPLRYKARLVANGFTQREGIDYNEVFSSVIKYKTIKLVLALGVLFNWELEQL 181
+K+G+ ++P +YK+RLVA GF+Q+EGIDYNEVFS V+K+K+I+++LA+ +FN EL+QL
Sbjct: 966 IKDGISXDEPPKYKSRLVAKGFSQKEGIDYNEVFSPVVKHKSIRVLLAMVSVFNLELDQL 1025
Query: 182 DVKTAFLHGELDEVIYMSQPQGFEVKGKSELV*LLNKSLYGLKQSPRQWYKRFDTFIQHL 361
DVKTAFLHG L+E IYM QP+GF KS+ V L KSLYGLKQSPRQWYKRFD F+
Sbjct: 1026 DVKTAFLHGNLEEEIYMKQPEGFVDSEKSDHVCFLKKSLYGLKQSPRQWYKRFDAFMVSH 1085
Query: 362 DFIKSEYDPCFYFK 403
+F++++YD C YFK
Sbjct: 1086 EFMRNQYDSCVYFK 1099
>emb|CAJ09951.2| putative gag-pol polyprotein [Citrus sinensis]
Length = 1334
Score = 174 bits (440), Expect = 3e-41
Identities = 81/135 (60%), Positives = 106/135 (78%)
Frame = +2
Query: 8 EGVEPNDPLRYKARLVANGFTQREGIDYNEVFSSVIKYKTIKLVLALGVLFNWELEQLDV 187
EG+ +P +YKARLVA GFTQREG+D+NE+FS V+K+ +I+++LA+ L + ELEQ+DV
Sbjct: 868 EGIPDVEPPKYKARLVARGFTQREGVDFNEIFSPVVKHSSIRILLAMVALLDLELEQMDV 927
Query: 188 KTAFLHGELDEVIYMSQPQGFEVKGKSELV*LLNKSLYGLKQSPRQWYKRFDTFIQHLDF 367
KTAFLHG L+E I M+QP+GFE K K + V LL+KSLYGLKQSPRQWY+RFD F+ +
Sbjct: 928 KTAFLHGNLEEQILMAQPEGFECKDKEDYVCLLHKSLYGLKQSPRQWYRRFDDFMVSKGY 987
Query: 368 IKSEYDPCFYFKGSE 412
+S YD C YF GS+
Sbjct: 988 RRSRYDSCVYFGGSD 1002
>gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|133711819|gb|ABO36636.1|
copia LTR rider [Solanum lycopersicum]
Length = 1307
Score = 172 bits (436), Expect = 8e-41
Identities = 80/132 (60%), Positives = 104/132 (78%)
Frame = +2
Query: 5 KEGVEPNDPLRYKARLVANGFTQREGIDYNEVFSSVIKYKTIKLVLALGVLFNWELEQLD 184
KEG+ P + ++YKAR+VA GF QREG+DYNE+FS V+++ +I+++LA+ N ELEQLD
Sbjct: 844 KEGISPAEGVKYKARVVARGFNQREGVDYNEIFSPVVRHTSIRVLLAIVAHQNLELEQLD 903
Query: 185 VKTAFLHGELDEVIYMSQPQGFEVKGKSELV*LLNKSLYGLKQSPRQWYKRFDTFIQHLD 364
VKTAFLHGEL+E IYM+QP GF+V GK V L KSLYGLKQSPRQWYKRFD+++ L
Sbjct: 904 VKTAFLHGELEEEIYMTQPDGFQVPGKENHVCKLKKSLYGLKQSPRQWYKRFDSYMVKLG 963
Query: 365 FIKSEYDPCFYF 400
+ +S YD C Y+
Sbjct: 964 YTRSSYDCCVYY 975
>gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1241
Score = 172 bits (436), Expect = 8e-41
Identities = 82/137 (59%), Positives = 105/137 (76%)
Frame = +2
Query: 5 KEGVEPNDPLRYKARLVANGFTQREGIDYNEVFSSVIKYKTIKLVLALGVLFNWELEQLD 184
KEG+ P+D RYKARLVA G++Q GID+N+VFS V+K+ +I+ +L++ + ++ELEQ+D
Sbjct: 778 KEGMSPSDEARYKARLVAKGYSQIPGIDFNDVFSPVVKHSSIRTLLSIVAMHDYELEQMD 837
Query: 185 VKTAFLHGELDEVIYMSQPQGFEVKGKSELV*LLNKSLYGLKQSPRQWYKRFDTFIQHLD 364
VKTAFLHGEL+E IYM QP+GF V GK LV L KSLYGLKQSPRQWYKRFD+F+
Sbjct: 838 VKTAFLHGELEEDIYMEQPEGFVVPGKENLVCRLKKSLYGLKQSPRQWYKRFDSFMLSQK 897
Query: 365 FIKSEYDPCFYFKGSEG 415
F +S YD C Y K +G
Sbjct: 898 FRRSNYDSCVYLKVVDG 914
>emb|CAJ86192.1| H0306F03.15 [Oryza sativa Indica Group]
Length = 1037
Score = 172 bits (435), Expect = 1e-40
Identities = 81/137 (59%), Positives = 105/137 (76%)
Frame = +2
Query: 5 KEGVEPNDPLRYKARLVANGFTQREGIDYNEVFSSVIKYKTIKLVLALGVLFNWELEQLD 184
KEG+ P+D RYKARLVA G++Q GID+N++FS V+K+ +I+ +L++ + ++ELEQ+D
Sbjct: 627 KEGMSPSDEARYKARLVAKGYSQIPGIDFNDIFSPVVKHSSIRTLLSIVAMHDYELEQMD 686
Query: 185 VKTAFLHGELDEVIYMSQPQGFEVKGKSELV*LLNKSLYGLKQSPRQWYKRFDTFIQHLD 364
VKTAFLHGEL+E IYM QP+GF V GK LV L KSLYGLKQSPRQWYKRFD+F+
Sbjct: 687 VKTAFLHGELEEDIYMEQPEGFVVPGKENLVCRLKKSLYGLKQSPRQWYKRFDSFMLSQK 746
Query: 365 FIKSEYDPCFYFKGSEG 415
F +S YD C Y K +G
Sbjct: 747 FRRSNYDSCVYLKVVDG 763
>emb|CAJ86151.1| H0413E07.4 [Oryza sativa Indica Group]
Length = 1205
Score = 172 bits (435), Expect = 1e-40
Identities = 81/137 (59%), Positives = 105/137 (76%)
Frame = +2
Query: 5 KEGVEPNDPLRYKARLVANGFTQREGIDYNEVFSSVIKYKTIKLVLALGVLFNWELEQLD 184
KEG+ P+D RYKARLVA G++Q GID+N++FS V+K+ +I+ +L++ + ++ELEQ+D
Sbjct: 795 KEGMSPSDEARYKARLVAKGYSQIPGIDFNDIFSPVVKHSSIRTLLSIVAMHDYELEQMD 854
Query: 185 VKTAFLHGELDEVIYMSQPQGFEVKGKSELV*LLNKSLYGLKQSPRQWYKRFDTFIQHLD 364
VKTAFLHGEL+E IYM QP+GF V GK LV L KSLYGLKQSPRQWYKRFD+F+
Sbjct: 855 VKTAFLHGELEEDIYMEQPEGFVVPGKENLVCRLKKSLYGLKQSPRQWYKRFDSFMLSQK 914
Query: 365 FIKSEYDPCFYFKGSEG 415
F +S YD C Y K +G
Sbjct: 915 FRRSNYDSCVYLKVVDG 931
>gb|AAM91886.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1280
Score = 170 bits (431), Expect = 3e-40
Identities = 81/137 (59%), Positives = 104/137 (75%)
Frame = +2
Query: 5 KEGVEPNDPLRYKARLVANGFTQREGIDYNEVFSSVIKYKTIKLVLALGVLFNWELEQLD 184
KEG+ P+D RYKARLVA G++Q GID+N+VFS ++K+ +I+ +L + + ++ELEQ+D
Sbjct: 904 KEGMSPSDEARYKARLVAKGYSQIPGIDFNDVFSPIMKHSSIRTLLGIVAMHDYELEQMD 963
Query: 185 VKTAFLHGELDEVIYMSQPQGFEVKGKSELV*LLNKSLYGLKQSPRQWYKRFDTFIQHLD 364
VKTAFLHGEL+E IYM QP+GF V GK LV L KSLYGLKQSPRQWYKRFD+F+
Sbjct: 964 VKTAFLHGELEEDIYMEQPEGFVVLGKENLVCRLKKSLYGLKQSPRQWYKRFDSFMLSQK 1023
Query: 365 FIKSEYDPCFYFKGSEG 415
F +S YD C Y K +G
Sbjct: 1024 FRRSNYDSCVYLKVVDG 1040
>gb|AAP54315.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1312
Score = 170 bits (431), Expect = 3e-40
Identities = 81/137 (59%), Positives = 104/137 (75%)
Frame = +2
Query: 5 KEGVEPNDPLRYKARLVANGFTQREGIDYNEVFSSVIKYKTIKLVLALGVLFNWELEQLD 184
KEG+ P+D RYKARLVA G++Q GID+N+VFS ++K+ +I+ +L + + ++ELEQ+D
Sbjct: 904 KEGMSPSDEARYKARLVAKGYSQIPGIDFNDVFSPIMKHSSIRTLLGIVAMHDYELEQMD 963
Query: 185 VKTAFLHGELDEVIYMSQPQGFEVKGKSELV*LLNKSLYGLKQSPRQWYKRFDTFIQHLD 364
VKTAFLHGEL+E IYM QP+GF V GK LV L KSLYGLKQSPRQWYKRFD+F+
Sbjct: 964 VKTAFLHGELEEDIYMEQPEGFVVLGKENLVCRLKKSLYGLKQSPRQWYKRFDSFMLSQK 1023
Query: 365 FIKSEYDPCFYFKGSEG 415
F +S YD C Y K +G
Sbjct: 1024 FRRSNYDSCVYLKVVDG 1040
>gb|AAT44257.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1211
Score = 169 bits (429), Expect = 5e-40
Identities = 81/137 (59%), Positives = 105/137 (76%)
Frame = +2
Query: 5 KEGVEPNDPLRYKARLVANGFTQREGIDYNEVFSSVIKYKTIKLVLALGVLFNWELEQLD 184
K+G+ P+D RYKARLVA G++Q GID+N+VFS V+K+ +I+ +L++ + ++ELEQ+D
Sbjct: 748 KKGMSPSDEARYKARLVAKGYSQIPGIDFNDVFSPVLKHSSIRTLLSIVAVHDYELEQMD 807
Query: 185 VKTAFLHGELDEVIYMSQPQGFEVKGKSELV*LLNKSLYGLKQSPRQWYKRFDTFIQHLD 364
VKTAFLHGEL+E IYM QP+GF V GK LV L KSLYGLKQSPRQWYKRFD+F+
Sbjct: 808 VKTAFLHGELEEDIYMEQPEGFVVPGKENLVYRLKKSLYGLKQSPRQWYKRFDSFMFSQK 867
Query: 365 FIKSEYDPCFYFKGSEG 415
F +S YD C Y K +G
Sbjct: 868 FRRSNYDSCVYLKVVDG 884
>gb|ABA99474.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 983
Score = 169 bits (428), Expect = 7e-40
Identities = 80/137 (58%), Positives = 104/137 (75%)
Frame = +2
Query: 5 KEGVEPNDPLRYKARLVANGFTQREGIDYNEVFSSVIKYKTIKLVLALGVLFNWELEQLD 184
KEG+ P+D RYKARLVA G++Q ID+N+VFS ++K+ +I+ +L++ + ++ELEQ+D
Sbjct: 611 KEGMSPSDEARYKARLVAKGYSQIPSIDFNDVFSPIVKHSSIRTLLSIVAMHDYELEQMD 670
Query: 185 VKTAFLHGELDEVIYMSQPQGFEVKGKSELV*LLNKSLYGLKQSPRQWYKRFDTFIQHLD 364
VKTAFLHGEL+E IYM QP+GF V GK LV L KSLYGLKQSPRQWYKRFD+F+
Sbjct: 671 VKTAFLHGELEEDIYMEQPEGFVVPGKENLVCRLKKSLYGLKQSPRQWYKRFDSFMLSQK 730
Query: 365 FIKSEYDPCFYFKGSEG 415
F +S YD C Y K +G
Sbjct: 731 FRRSNYDNCVYLKVVDG 747
>gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
Japonica Group] gi|77548751|gb|ABA91548.1|
retrotransposon protein, putative, Ty1-copia subclass
[Oryza sativa Japonica Group]
Length = 2340
Score = 169 bits (428), Expect = 7e-40
Identities = 80/137 (58%), Positives = 104/137 (75%)
Frame = +2
Query: 5 KEGVEPNDPLRYKARLVANGFTQREGIDYNEVFSSVIKYKTIKLVLALGVLFNWELEQLD 184
KEG+ +D RYKARL+A G++Q GID+N+VFS V+K+ +I+ +L++ + ++ELEQ+D
Sbjct: 1076 KEGISSSDEARYKARLIAKGYSQIPGIDFNDVFSPVVKHSSIRTLLSIVAMHDYELEQMD 1135
Query: 185 VKTAFLHGELDEVIYMSQPQGFEVKGKSELV*LLNKSLYGLKQSPRQWYKRFDTFIQHLD 364
VKTAFLHGEL+E IYM QP+GF V GK LV L KSLYGLKQSPRQWYKRFD+F+
Sbjct: 1136 VKTAFLHGELEEDIYMEQPKGFVVPGKENLVCRLKKSLYGLKQSPRQWYKRFDSFMLSQK 1195
Query: 365 FIKSEYDPCFYFKGSEG 415
F +S YD C Y K +G
Sbjct: 1196 FRRSNYDSCVYLKVVDG 1212
>ref|XP_010676254.1| PREDICTED: uncharacterized protein LOC104892119 [Beta vulgaris subsp.
vulgaris]
Length = 1947
Score = 168 bits (425), Expect = 1e-39
Identities = 81/131 (61%), Positives = 101/131 (77%)
Frame = +2
Query: 5 KEGVEPNDPLRYKARLVANGFTQREGIDYNEVFSSVIKYKTIKLVLALGVLFNWELEQLD 184
KEG + +RYKARLVA GF+QREG+DYNE+FS V+++ +I+++LA+ F+ ELEQLD
Sbjct: 957 KEGTSEGESVRYKARLVAKGFSQREGVDYNEIFSPVVRHTSIRVLLAMVAHFDLELEQLD 1016
Query: 185 VKTAFLHGELDEVIYMSQPQGFEVKGKSELV*LLNKSLYGLKQSPRQWYKRFDTFIQHLD 364
VKTAFLHGEL+E I MSQP+GF V GK + L KSLYGLKQSPRQWYKRFD+F+
Sbjct: 1017 VKTAFLHGELEEDILMSQPEGFVVPGKEKFACSLKKSLYGLKQSPRQWYKRFDSFMVEHG 1076
Query: 365 FIKSEYDPCFY 397
F +S YD C Y
Sbjct: 1077 FDRSPYDCCVY 1087
>gb|AAT44282.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1243
Score = 168 bits (425), Expect = 1e-39
Identities = 81/137 (59%), Positives = 103/137 (75%)
Frame = +2
Query: 5 KEGVEPNDPLRYKARLVANGFTQREGIDYNEVFSSVIKYKTIKLVLALGVLFNWELEQLD 184
KEG+ P+D RYKARLVA G++Q GID+N+VFS V+K+ +I+ +L + + ++ELEQ++
Sbjct: 841 KEGMSPSDEARYKARLVAKGYSQIPGIDFNDVFSPVVKHSSIRTLLGIVAMHDYELEQMN 900
Query: 185 VKTAFLHGELDEVIYMSQPQGFEVKGKSELV*LLNKSLYGLKQSPRQWYKRFDTFIQHLD 364
VKTAFLHGEL+E IYM QP+GF V GK LV L KSLYGLKQSPRQWYKRFD+F+
Sbjct: 901 VKTAFLHGELEEDIYMEQPEGFVVPGKENLVCRLKKSLYGLKQSPRQWYKRFDSFMLSQK 960
Query: 365 FIKSEYDPCFYFKGSEG 415
F S YD C Y K +G
Sbjct: 961 FRISNYDSCVYLKVVDG 977
>emb|CAD40121.3| OSJNBa0061C06.5 [Oryza sativa Japonica Group]
Length = 621
Score = 168 bits (425), Expect = 1e-39
Identities = 80/137 (58%), Positives = 104/137 (75%)
Frame = +2
Query: 5 KEGVEPNDPLRYKARLVANGFTQREGIDYNEVFSSVIKYKTIKLVLALGVLFNWELEQLD 184
KE + P+D YKARLVA G++Q GID+N+VFS V+K+ +I+ +L++ + ++ELEQ+D
Sbjct: 255 KECISPSDEAMYKARLVAKGYSQIPGIDFNDVFSPVVKHSSIRTLLSIVAMHDYELEQMD 314
Query: 185 VKTAFLHGELDEVIYMSQPQGFEVKGKSELV*LLNKSLYGLKQSPRQWYKRFDTFIQHLD 364
VKTAFLHGEL+E IYM QP+GF V GK LV L KSLYGLKQSPRQWYKRFD+F+
Sbjct: 315 VKTAFLHGELEEDIYMEQPEGFVVPGKENLVCRLKKSLYGLKQSPRQWYKRFDSFMLSQK 374
Query: 365 FIKSEYDPCFYFKGSEG 415
F +S YD C Y K ++G
Sbjct: 375 FRRSNYDSCVYVKVADG 391
>gb|ABA97637.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1278
Score = 167 bits (423), Expect = 3e-39
Identities = 80/137 (58%), Positives = 103/137 (75%)
Frame = +2
Query: 5 KEGVEPNDPLRYKARLVANGFTQREGIDYNEVFSSVIKYKTIKLVLALGVLFNWELEQLD 184
KEG+ P++P R+KARLVA GF+Q G+DYN+VFS V+K+ +I+ ++ + + ELEQLD
Sbjct: 859 KEGLSPSEPPRFKARLVAKGFSQIVGVDYNDVFSPVVKHSSIRTFFSIVAMHDLELEQLD 918
Query: 185 VKTAFLHGELDEVIYMSQPQGFEVKGKSELV*LLNKSLYGLKQSPRQWYKRFDTFIQHLD 364
VKTAFLHGEL+E IYM QP+GF V GK + V L +SLYGLKQSPRQWYKRFD+F+
Sbjct: 919 VKTAFLHGELEEEIYMDQPEGFIVPGKEDYVCKLKRSLYGLKQSPRQWYKRFDSFMLSHG 978
Query: 365 FIKSEYDPCFYFKGSEG 415
F +SE+D C Y K G
Sbjct: 979 FKRSEFDSCVYIKFVNG 995
>gb|ACS74199.1| putative gag-pol polyprotein [Fragaria x ananassa]
Length = 1297
Score = 167 bits (422), Expect = 3e-39
Identities = 74/132 (56%), Positives = 104/132 (78%)
Frame = +2
Query: 5 KEGVEPNDPLRYKARLVANGFTQREGIDYNEVFSSVIKYKTIKLVLALGVLFNWELEQLD 184
KEG+ +D + YKARLVA G++Q+EG+DY+E+FS V+K+ +I+L+L++ ++ E+EQ+D
Sbjct: 835 KEGIHEDDAITYKARLVAKGYSQKEGVDYDEIFSPVVKHTSIRLLLSIAAQYDMEIEQMD 894
Query: 185 VKTAFLHGELDEVIYMSQPQGFEVKGKSELV*LLNKSLYGLKQSPRQWYKRFDTFIQHLD 364
VKTAFLHG+L+E IYMSQP+GF GK LV L KSLYGLKQSPRQWYK FDT++ +
Sbjct: 895 VKTAFLHGDLEEDIYMSQPEGFVETGKENLVCRLKKSLYGLKQSPRQWYKPFDTYMLKIG 954
Query: 365 FIKSEYDPCFYF 400
+ + +YD C Y+
Sbjct: 955 YTRCQYDCCVYY 966
>gb|AAR87163.1| putative polyprotein [Oryza sativa Japonica Group]
gi|53370655|gb|AAU89150.1| integrase core domain
containing protein [Oryza sativa Japonica Group]
gi|108710286|gb|ABF98081.1| retrotransposon protein,
putative, Ty1-copia subclass [Oryza sativa Japonica
Group]
Length = 1322
Score = 164 bits (416), Expect = 2e-38
Identities = 78/137 (56%), Positives = 101/137 (73%)
Frame = +2
Query: 5 KEGVEPNDPLRYKARLVANGFTQREGIDYNEVFSSVIKYKTIKLVLALGVLFNWELEQLD 184
KEG+ P++P R+K RLVA GF+Q G+DYN+VFS V+K+ +I+ ++ + + ELEQLD
Sbjct: 859 KEGLSPSEPPRFKVRLVAKGFSQIAGVDYNDVFSPVVKHSSIRTFFSIVTMHDLELEQLD 918
Query: 185 VKTAFLHGELDEVIYMSQPQGFEVKGKSELV*LLNKSLYGLKQSPRQWYKRFDTFIQHLD 364
VKT FLHGEL+E IYM QP+GF V GK + V L +SLYGLKQSPRQWYKRFD+F+
Sbjct: 919 VKTTFLHGELEEEIYMDQPEGFIVPGKEDYVCKLKRSLYGLKQSPRQWYKRFDSFMLSHG 978
Query: 365 FIKSEYDPCFYFKGSEG 415
F +SE+D C Y K G
Sbjct: 979 FKRSEFDSCVYIKFVNG 995
>emb|CAI44659.1| OSJNBa0061C06.9 [Oryza sativa Japonica Group]
Length = 1007
Score = 164 bits (414), Expect = 3e-38
Identities = 78/137 (56%), Positives = 103/137 (75%)
Frame = +2
Query: 5 KEGVEPNDPLRYKARLVANGFTQREGIDYNEVFSSVIKYKTIKLVLALGVLFNWELEQLD 184
K+G+ P+D YKARLVA G++Q GID+N+VFS V+K+ +I+ +L++ + ++ELEQ+D
Sbjct: 651 KKGISPSDEAMYKARLVAKGYSQIPGIDFNDVFSPVVKHSSIRTLLSIVAMHDYELEQMD 710
Query: 185 VKTAFLHGELDEVIYMSQPQGFEVKGKSELV*LLNKSLYGLKQSPRQWYKRFDTFIQHLD 364
VKTAFLHGEL+E IYM Q +GF V GK LV L KSLYGLKQS RQWYKRFD+F+
Sbjct: 711 VKTAFLHGELEEDIYMEQSEGFVVPGKENLVCRLKKSLYGLKQSSRQWYKRFDSFMLSQK 770
Query: 365 FIKSEYDPCFYFKGSEG 415
F +S YD C Y K ++G
Sbjct: 771 FRRSNYDSCVYVKVADG 787
>dbj|BAB09923.1| copia-like retrotransposable element [Arabidopsis thaliana]
Length = 1342
Score = 163 bits (412), Expect = 5e-38
Identities = 79/131 (60%), Positives = 103/131 (78%)
Frame = +2
Query: 5 KEGVEPNDPLRYKARLVANGFTQREGIDYNEVFSSVIKYKTIKLVLALGVLFNWELEQLD 184
K G+ +P RYKARLVA GF+QREGIDY E+FS V+K+ +I+ +L++ V F+ ELEQLD
Sbjct: 876 KAGIPGVEPPRYKARLVAKGFSQREGIDYQEIFSPVVKHVSIRYLLSIVVQFDMELEQLD 935
Query: 185 VKTAFLHGELDEVIYMSQPQGFEVKGKSELV*LLNKSLYGLKQSPRQWYKRFDTFIQHLD 364
VKTAFLHG LDE I MSQP+G+E + +E V LL KSLYGLKQSPRQW +RFD+F+ +
Sbjct: 936 VKTAFLHGNLDEYILMSQPEGYEDEDSTEKVCLLKKSLYGLKQSPRQWNQRFDSFMINSG 995
Query: 365 FIKSEYDPCFY 397
+ +S+Y+PC Y
Sbjct: 996 YQRSKYNPCVY 1006
>gb|AAL91607.1|AC099400_13 Putative pol polyprotein [Oryza sativa Japonica Group]
gi|18542925|gb|AAL75759.1| Putative pol polyprotein
[Oryza sativa Japonica Group] gi|31429763|gb|AAP51772.1|
retrotransposon protein, putative, Ty1-copia subclass
[Oryza sativa Japonica Group]
Length = 1005
Score = 162 bits (411), Expect = 6e-38
Identities = 78/137 (56%), Positives = 100/137 (72%)
Frame = +2
Query: 5 KEGVEPNDPLRYKARLVANGFTQREGIDYNEVFSSVIKYKTIKLVLALGVLFNWELEQLD 184
KEG+ P++P R+KA+LVA GF+Q G+DYN+VFS V+K+ +I+ ++ + + ELEQLD
Sbjct: 543 KEGLSPSEPPRFKAKLVAKGFSQIAGVDYNDVFSPVVKHSSIRTFFSIVAMHDLELEQLD 602
Query: 185 VKTAFLHGELDEVIYMSQPQGFEVKGKSELV*LLNKSLYGLKQSPRQWYKRFDTFIQHLD 364
VKTAFLHGEL+E IYM QP+GF V GK V L +S YGLKQSPRQWYKRFD F+
Sbjct: 603 VKTAFLHGELEEEIYMDQPEGFIVPGKEGYVCKLKRSFYGLKQSPRQWYKRFDLFMLSHG 662
Query: 365 FIKSEYDPCFYFKGSEG 415
F +SE+D C Y K G
Sbjct: 663 FKRSEFDSCVYIKFVNG 679