BLASTX nr result

ID: Forsythia21_contig00024511 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Forsythia21_contig00024511
         (255 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011085961.1| PREDICTED: E3 ubiquitin-protein ligase RMA1H...    63   9e-08
ref|XP_006371566.1| zinc finger family protein [Populus trichoca...    61   3e-07
ref|XP_011002900.1| PREDICTED: E3 ubiquitin-protein ligase RMA1H...    60   7e-07
ref|XP_002272136.1| PREDICTED: E3 ubiquitin-protein ligase RMA1H...    59   2e-06
ref|XP_011037320.1| PREDICTED: E3 ubiquitin-protein ligase RMA1H...    58   2e-06
ref|XP_006376502.1| zinc finger family protein [Populus trichoca...    57   4e-06
gb|KEH19655.1| E3 ubiquitin-protein ligase RMA1H1-like protein [...    56   8e-06

>ref|XP_011085961.1| PREDICTED: E3 ubiquitin-protein ligase RMA1H1 [Sesamum indicum]
           gi|747077660|ref|XP_011085962.1| PREDICTED: E3
           ubiquitin-protein ligase RMA1H1 [Sesamum indicum]
          Length = 251

 Score = 62.8 bits (151), Expect = 9e-08
 Identities = 29/51 (56%), Positives = 34/51 (66%)
 Frame = -3

Query: 154 EQYLPETAVQSDYNEEKTALEKWKSLSSADDESETNIPGGFECNICLDLVQ 2
           E Y     +Q + NE + + E WKSL+S  DE ETN  GGFECNICLDLVQ
Sbjct: 2   EHYHQGARIQRELNEAEASCENWKSLTSTLDEPETNSSGGFECNICLDLVQ 52


>ref|XP_006371566.1| zinc finger family protein [Populus trichocarpa]
           gi|550317445|gb|ERP49363.1| zinc finger family protein
           [Populus trichocarpa]
          Length = 263

 Score = 61.2 bits (147), Expect = 3e-07
 Identities = 30/55 (54%), Positives = 37/55 (67%), Gaps = 1/55 (1%)
 Frame = -3

Query: 163 MATEQYLPETAVQSDYNEE-KTALEKWKSLSSADDESETNIPGGFECNICLDLVQ 2
           MATEQYL ET  Q+DYN E K +L KWK +     +S+ +   GF+CNICLD VQ
Sbjct: 1   MATEQYLEETVAQNDYNREYKPSLLKWKPIPKTAIDSDESPSNGFDCNICLDSVQ 55


>ref|XP_011002900.1| PREDICTED: E3 ubiquitin-protein ligase RMA1H1-like [Populus
           euphratica] gi|743917818|ref|XP_011002901.1| PREDICTED:
           E3 ubiquitin-protein ligase RMA1H1-like [Populus
           euphratica] gi|743917820|ref|XP_011002902.1| PREDICTED:
           E3 ubiquitin-protein ligase RMA1H1-like [Populus
           euphratica] gi|743917822|ref|XP_011002903.1| PREDICTED:
           E3 ubiquitin-protein ligase RMA1H1-like [Populus
           euphratica]
          Length = 263

 Score = 59.7 bits (143), Expect = 7e-07
 Identities = 29/55 (52%), Positives = 37/55 (67%), Gaps = 1/55 (1%)
 Frame = -3

Query: 163 MATEQYLPETAVQSDYNEE-KTALEKWKSLSSADDESETNIPGGFECNICLDLVQ 2
           MATEQY+ ET  Q+DYN E K +L KWK +     +S+ +   GF+CNICLD VQ
Sbjct: 1   MATEQYMDETDAQNDYNREYKPSLLKWKPIPKTAIDSDDSPSNGFDCNICLDSVQ 55


>ref|XP_002272136.1| PREDICTED: E3 ubiquitin-protein ligase RMA1H1 [Vitis vinifera]
           gi|225446339|ref|XP_002272107.1| PREDICTED: E3
           ubiquitin-protein ligase RMA1H1 [Vitis vinifera]
          Length = 260

 Score = 58.5 bits (140), Expect = 2e-06
 Identities = 27/52 (51%), Positives = 37/52 (71%), Gaps = 1/52 (1%)
 Frame = -3

Query: 154 EQYLPETAVQSDYNEEK-TALEKWKSLSSADDESETNIPGGFECNICLDLVQ 2
           EQY  E   Q+D N+E  +++E WK +S+AD+ S+ N  GGF+CNICLD VQ
Sbjct: 2   EQYFQEAMPQNDLNKEDGSSMENWKPVSAADNGSDKNSYGGFDCNICLDFVQ 53


>ref|XP_011037320.1| PREDICTED: E3 ubiquitin-protein ligase RMA1H1 [Populus euphratica]
           gi|743884600|ref|XP_011037321.1| PREDICTED: E3
           ubiquitin-protein ligase RMA1H1 [Populus euphratica]
          Length = 263

 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 27/54 (50%), Positives = 37/54 (68%), Gaps = 1/54 (1%)
 Frame = -3

Query: 163 MATEQYLPETAVQSDYN-EEKTALEKWKSLSSADDESETNIPGGFECNICLDLV 5
           MA +QY+ ET  Q+DYN E+K +L  WKS+S    +S+ +   GF+CNICLD V
Sbjct: 1   MALDQYMEETVAQNDYNTEDKPSLPNWKSVSETAIDSDDSPSSGFDCNICLDSV 54


>ref|XP_006376502.1| zinc finger family protein [Populus trichocarpa]
           gi|550325778|gb|ERP54299.1| zinc finger family protein
           [Populus trichocarpa]
          Length = 263

 Score = 57.4 bits (137), Expect = 4e-06
 Identities = 27/54 (50%), Positives = 37/54 (68%), Gaps = 1/54 (1%)
 Frame = -3

Query: 163 MATEQYLPETAVQSDYN-EEKTALEKWKSLSSADDESETNIPGGFECNICLDLV 5
           MA +QY+ ET  Q+DYN E+K +L  WKS+S    +S+ +   GF+CNICLD V
Sbjct: 1   MALDQYMEETMAQNDYNREDKPSLPNWKSVSETVIDSDDSRSSGFDCNICLDSV 54


>gb|KEH19655.1| E3 ubiquitin-protein ligase RMA1H1-like protein [Medicago
           truncatula]
          Length = 244

 Score = 56.2 bits (134), Expect = 8e-06
 Identities = 25/54 (46%), Positives = 35/54 (64%)
 Frame = -3

Query: 163 MATEQYLPETAVQSDYNEEKTALEKWKSLSSADDESETNIPGGFECNICLDLVQ 2
           MA +QY+ +T  Q D  EEK +L+ WK+ +    +S+ N   GF+CNICLD VQ
Sbjct: 1   MALDQYMDDTVSQIDTFEEKPSLKNWKTSTDVIADSDRNASSGFDCNICLDCVQ 54


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