BLASTX nr result

ID: Forsythia21_contig00024042 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Forsythia21_contig00024042
         (670 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011095177.1| PREDICTED: transcription termination factor ...   111   3e-22
ref|XP_012832310.1| PREDICTED: DNA repair protein RAD16 isoform ...   101   4e-19
ref|XP_012832312.1| PREDICTED: DNA repair protein RAD16 isoform ...    71   6e-10
ref|XP_009607689.1| PREDICTED: uncharacterized ATP-dependent hel...    60   1e-06
emb|CDP04863.1| unnamed protein product [Coffea canephora]             59   2e-06

>ref|XP_011095177.1| PREDICTED: transcription termination factor 2 [Sesamum indicum]
          Length = 1059

 Score =  111 bits (278), Expect = 3e-22
 Identities = 73/144 (50%), Positives = 92/144 (63%), Gaps = 7/144 (4%)
 Frame = -1

Query: 412 DPLRGILEFTQKCYSIFCGILEILRH-SSQVGSTFGNSSELIVES-EDYPLAVMASVXXX 239
           D +  IL+F++  +SIF GIL+ LR  S  V S F  SSEL+V +  ++ LA MASV   
Sbjct: 3   DHVDSILKFSRG-HSIFGGILDYLRRFSCVVSSAFVYSSELLVNAPSNHSLAAMASVDPI 61

Query: 238 XXXXXXXXXDLREIDNYREESPVRDTAASASSRVLPPWASPI-PNLTGYNDISWNAPSSK 62
                    DLREIDNYR+ESPVRDTA+S +SR+LP WAS    NLTGYN +S   PSS 
Sbjct: 62  DISSTDSDSDLREIDNYRDESPVRDTASSINSRILPSWASSAHSNLTGYNGLSRKDPSSS 121

Query: 61  ----ISDEISLKPHKHLHTAETAG 2
               + DE+  +PHK L+TAET G
Sbjct: 122 KRQIVYDEMPSRPHKRLNTAETVG 145


>ref|XP_012832310.1| PREDICTED: DNA repair protein RAD16 isoform X1 [Erythranthe
           guttatus] gi|848863079|ref|XP_012832311.1| PREDICTED:
           DNA repair protein RAD16 isoform X1 [Erythranthe
           guttatus]
          Length = 1057

 Score =  101 bits (251), Expect = 4e-19
 Identities = 66/147 (44%), Positives = 88/147 (59%), Gaps = 5/147 (3%)
 Frame = -1

Query: 427 MLDDVDPLRGILEFTQKCYSIFCGILEILRHSSQV-GSTFGNSSELIVESEDYPLAVMAS 251
           M D VDP+  IL+F+++ ++IF GIL+ LR  S V  S FG S EL+  + +     M S
Sbjct: 1   MPDHVDPVDNILKFSRR-HAIFGGILDYLRRFSYVVSSAFGQSIELLSPTHNSSFEAMDS 59

Query: 250 VXXXXXXXXXXXXDLREIDNYREESPVRDTAASASSRVLPPWASPIPNLTGYNDISWNAP 71
           V            DLREIDNYR+ESP RDT +S +SR+LP WAS   + TG   +S   P
Sbjct: 60  VGPIDISSTDSDSDLREIDNYRDESPERDTLSSMNSRILPSWASS-THSTGQTGLSRKDP 118

Query: 70  SS----KISDEISLKPHKHLHTAETAG 2
           SS     +++ IS +PHK L+ AETAG
Sbjct: 119 SSSKRPNVNNGISPRPHKRLNIAETAG 145


>ref|XP_012832312.1| PREDICTED: DNA repair protein RAD16 isoform X2 [Erythranthe
           guttatus]
          Length = 1001

 Score = 70.9 bits (172), Expect = 6e-10
 Identities = 39/73 (53%), Positives = 50/73 (68%), Gaps = 4/73 (5%)
 Frame = -1

Query: 208 LREIDNYREESPVRDTAASASSRVLPPWASPIPNLTGYNDISWNAPSS----KISDEISL 41
           LREIDNYR+ESP RDT +S +SR+LP WAS   + TG   +S   PSS     +++ IS 
Sbjct: 18  LREIDNYRDESPERDTLSSMNSRILPSWASS-THSTGQTGLSRKDPSSSKRPNVNNGISP 76

Query: 40  KPHKHLHTAETAG 2
           +PHK L+ AETAG
Sbjct: 77  RPHKRLNIAETAG 89


>ref|XP_009607689.1| PREDICTED: uncharacterized ATP-dependent helicase C23E6.02 isoform
           X1 [Nicotiana tomentosiformis]
          Length = 1001

 Score = 59.7 bits (143), Expect = 1e-06
 Identities = 40/102 (39%), Positives = 57/102 (55%), Gaps = 3/102 (2%)
 Frame = -1

Query: 415 VDPLRGILEFTQKCYSIFCGILE--ILRHSSQ-VGSTFGNSSELIVESEDYPLAVMASVX 245
           VDP+ G LE+T+   + FC ++   +LRH S  VGS F     + + S+D          
Sbjct: 5   VDPVGGFLEYTR---TFFCNLVINLLLRHRSHLVGSIFSPMDAISISSDD---------- 51

Query: 244 XXXXXXXXXXXDLREIDNYREESPVRDTAASASSRVLPPWAS 119
                      DLREIDNY+++SP+RD   SA+SR+LPPWA+
Sbjct: 52  ----------SDLREIDNYKDDSPLRD---SATSRILPPWAT 80


>emb|CDP04863.1| unnamed protein product [Coffea canephora]
          Length = 345

 Score = 59.3 bits (142), Expect = 2e-06
 Identities = 45/118 (38%), Positives = 64/118 (54%), Gaps = 3/118 (2%)
 Frame = -1

Query: 427 MLDDVDPLRGILEFTQKCYSIFCGILEILRHSSQ--VGSTFGNSSELIVESEDYPLAVMA 254
           M D  DPL   ++ T+K + ++    E+L    +  VGS FG+SS+L+   E+   A MA
Sbjct: 1   MSDHGDPLHFGVDSTKKTW-LYWPFAELLLRPLRRVVGSLFGSSSKLVFARENPHSAGMA 59

Query: 253 SVXXXXXXXXXXXXDLREIDNYREESPVRDTAASASSRVLPPWA-SPIPNLTGYNDIS 83
           SV             LREID Y +ESP+RD+A S+++R LP WA S   N+ G    S
Sbjct: 60  SVDPIDISSSDDSI-LREIDEYFDESPLRDSATSSNARSLPNWAFSSSSNMAGRGSTS 116


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