BLASTX nr result
ID: Forsythia21_contig00024042
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Forsythia21_contig00024042 (670 letters) Database: ./nr 69,698,275 sequences; 24,982,196,650 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_011095177.1| PREDICTED: transcription termination factor ... 111 3e-22 ref|XP_012832310.1| PREDICTED: DNA repair protein RAD16 isoform ... 101 4e-19 ref|XP_012832312.1| PREDICTED: DNA repair protein RAD16 isoform ... 71 6e-10 ref|XP_009607689.1| PREDICTED: uncharacterized ATP-dependent hel... 60 1e-06 emb|CDP04863.1| unnamed protein product [Coffea canephora] 59 2e-06 >ref|XP_011095177.1| PREDICTED: transcription termination factor 2 [Sesamum indicum] Length = 1059 Score = 111 bits (278), Expect = 3e-22 Identities = 73/144 (50%), Positives = 92/144 (63%), Gaps = 7/144 (4%) Frame = -1 Query: 412 DPLRGILEFTQKCYSIFCGILEILRH-SSQVGSTFGNSSELIVES-EDYPLAVMASVXXX 239 D + IL+F++ +SIF GIL+ LR S V S F SSEL+V + ++ LA MASV Sbjct: 3 DHVDSILKFSRG-HSIFGGILDYLRRFSCVVSSAFVYSSELLVNAPSNHSLAAMASVDPI 61 Query: 238 XXXXXXXXXDLREIDNYREESPVRDTAASASSRVLPPWASPI-PNLTGYNDISWNAPSSK 62 DLREIDNYR+ESPVRDTA+S +SR+LP WAS NLTGYN +S PSS Sbjct: 62 DISSTDSDSDLREIDNYRDESPVRDTASSINSRILPSWASSAHSNLTGYNGLSRKDPSSS 121 Query: 61 ----ISDEISLKPHKHLHTAETAG 2 + DE+ +PHK L+TAET G Sbjct: 122 KRQIVYDEMPSRPHKRLNTAETVG 145 >ref|XP_012832310.1| PREDICTED: DNA repair protein RAD16 isoform X1 [Erythranthe guttatus] gi|848863079|ref|XP_012832311.1| PREDICTED: DNA repair protein RAD16 isoform X1 [Erythranthe guttatus] Length = 1057 Score = 101 bits (251), Expect = 4e-19 Identities = 66/147 (44%), Positives = 88/147 (59%), Gaps = 5/147 (3%) Frame = -1 Query: 427 MLDDVDPLRGILEFTQKCYSIFCGILEILRHSSQV-GSTFGNSSELIVESEDYPLAVMAS 251 M D VDP+ IL+F+++ ++IF GIL+ LR S V S FG S EL+ + + M S Sbjct: 1 MPDHVDPVDNILKFSRR-HAIFGGILDYLRRFSYVVSSAFGQSIELLSPTHNSSFEAMDS 59 Query: 250 VXXXXXXXXXXXXDLREIDNYREESPVRDTAASASSRVLPPWASPIPNLTGYNDISWNAP 71 V DLREIDNYR+ESP RDT +S +SR+LP WAS + TG +S P Sbjct: 60 VGPIDISSTDSDSDLREIDNYRDESPERDTLSSMNSRILPSWASS-THSTGQTGLSRKDP 118 Query: 70 SS----KISDEISLKPHKHLHTAETAG 2 SS +++ IS +PHK L+ AETAG Sbjct: 119 SSSKRPNVNNGISPRPHKRLNIAETAG 145 >ref|XP_012832312.1| PREDICTED: DNA repair protein RAD16 isoform X2 [Erythranthe guttatus] Length = 1001 Score = 70.9 bits (172), Expect = 6e-10 Identities = 39/73 (53%), Positives = 50/73 (68%), Gaps = 4/73 (5%) Frame = -1 Query: 208 LREIDNYREESPVRDTAASASSRVLPPWASPIPNLTGYNDISWNAPSS----KISDEISL 41 LREIDNYR+ESP RDT +S +SR+LP WAS + TG +S PSS +++ IS Sbjct: 18 LREIDNYRDESPERDTLSSMNSRILPSWASS-THSTGQTGLSRKDPSSSKRPNVNNGISP 76 Query: 40 KPHKHLHTAETAG 2 +PHK L+ AETAG Sbjct: 77 RPHKRLNIAETAG 89 >ref|XP_009607689.1| PREDICTED: uncharacterized ATP-dependent helicase C23E6.02 isoform X1 [Nicotiana tomentosiformis] Length = 1001 Score = 59.7 bits (143), Expect = 1e-06 Identities = 40/102 (39%), Positives = 57/102 (55%), Gaps = 3/102 (2%) Frame = -1 Query: 415 VDPLRGILEFTQKCYSIFCGILE--ILRHSSQ-VGSTFGNSSELIVESEDYPLAVMASVX 245 VDP+ G LE+T+ + FC ++ +LRH S VGS F + + S+D Sbjct: 5 VDPVGGFLEYTR---TFFCNLVINLLLRHRSHLVGSIFSPMDAISISSDD---------- 51 Query: 244 XXXXXXXXXXXDLREIDNYREESPVRDTAASASSRVLPPWAS 119 DLREIDNY+++SP+RD SA+SR+LPPWA+ Sbjct: 52 ----------SDLREIDNYKDDSPLRD---SATSRILPPWAT 80 >emb|CDP04863.1| unnamed protein product [Coffea canephora] Length = 345 Score = 59.3 bits (142), Expect = 2e-06 Identities = 45/118 (38%), Positives = 64/118 (54%), Gaps = 3/118 (2%) Frame = -1 Query: 427 MLDDVDPLRGILEFTQKCYSIFCGILEILRHSSQ--VGSTFGNSSELIVESEDYPLAVMA 254 M D DPL ++ T+K + ++ E+L + VGS FG+SS+L+ E+ A MA Sbjct: 1 MSDHGDPLHFGVDSTKKTW-LYWPFAELLLRPLRRVVGSLFGSSSKLVFARENPHSAGMA 59 Query: 253 SVXXXXXXXXXXXXDLREIDNYREESPVRDTAASASSRVLPPWA-SPIPNLTGYNDIS 83 SV LREID Y +ESP+RD+A S+++R LP WA S N+ G S Sbjct: 60 SVDPIDISSSDDSI-LREIDEYFDESPLRDSATSSNARSLPNWAFSSSSNMAGRGSTS 116