BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Forsythia21_contig00021736
         (777 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_008462083.1| PREDICTED: pentatricopeptide repeat-containi...   275   2e-71
ref|XP_012081524.1| PREDICTED: pentatricopeptide repeat-containi...   272   2e-70
ref|XP_004144616.1| PREDICTED: pentatricopeptide repeat-containi...   270   1e-69
ref|XP_008342194.1| PREDICTED: pentatricopeptide repeat-containi...   268   2e-69
ref|XP_009365211.1| PREDICTED: pentatricopeptide repeat-containi...   268   3e-69
ref|XP_010657440.1| PREDICTED: pentatricopeptide repeat-containi...   267   5e-69
ref|XP_010657439.1| PREDICTED: pentatricopeptide repeat-containi...   267   5e-69
ref|XP_008229896.1| PREDICTED: pentatricopeptide repeat-containi...   267   6e-69
ref|XP_011461951.1| PREDICTED: pentatricopeptide repeat-containi...   266   8e-69
ref|XP_002531691.1| pentatricopeptide repeat-containing protein,...   265   2e-68
ref|XP_008379986.1| PREDICTED: pentatricopeptide repeat-containi...   264   4e-68
ref|XP_010045870.1| PREDICTED: pentatricopeptide repeat-containi...   261   4e-67
ref|XP_010112786.1| hypothetical protein L484_020017 [Morus nota...   260   6e-67
ref|XP_012485806.1| PREDICTED: pentatricopeptide repeat-containi...   259   1e-66
ref|XP_010557708.1| PREDICTED: pentatricopeptide repeat-containi...   254   4e-65
ref|XP_010557707.1| PREDICTED: pentatricopeptide repeat-containi...   254   4e-65
gb|KJB10244.1| hypothetical protein B456_001G192200, partial [Go...   251   3e-64
ref|XP_007049307.1| Pentatricopeptide repeat superfamily protein...   251   3e-64
ref|XP_009102373.1| PREDICTED: pentatricopeptide repeat-containi...   249   2e-63
gb|KDO58423.1| hypothetical protein CISIN_1g036237mg [Citrus sin...   248   2e-63

>ref|XP_008462083.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g48910-like [Cucumis melo]
          Length = 681

 Score =  275 bits (703), Expect = 2e-71
 Identities = 142/280 (50%), Positives = 189/280 (67%), Gaps = 23/280 (8%)
 Frame = +2

Query: 5   KEVTQLHAQHIFTSTILSNNIEIPV-----------------------KKTLFSYNTIIK 115
           +E  QLHA  I T+++   ++  P+                       K TL S+N +IK
Sbjct: 29  REANQLHALSIKTASLNHPSVSSPLLALYAHPTINNLQYAQSLFDWIQKPTLVSWNLLIK 88

Query: 116 RFLQNHLSQDALMVFVKLLCCPGLLPDEFTLPCAIKACANLGAVREGKMIHGLALKLGFG 295
            +++N  S DA+ +F KLLC    +PD FTLPC +K CA LGA++EGK IHGL LK+GFG
Sbjct: 89  CYIENQRSNDAIALFCKLLC--DFMPDSFTLPCVLKGCARLGALQEGKQIHGLVLKIGFG 146

Query: 296 SGSGVHVESSLVRLYSKCGDINSARKLFDKMIVKDLVSWNVLLDGYVKCGGENIEVVLRL 475
                 V SSLV +YSKCG+I   RK+FD+M  KD+VSWN L+DGY +CG   IE+ L +
Sbjct: 147 VDK--FVLSSLVSMYSKCGEIELCRKVFDRMEDKDVVSWNSLIDGYARCG--EIELALEV 202

Query: 476 FDEMPEKDVFTWTVLIDGLAKSGRVEEAREVFDSMLDKNVASWNAMINGYMKSGYYKLAR 655
           F+EMPEKD F+WT+LIDGL+KSG++E AR VFD M  +N  SWNAMINGYMK+GY   A+
Sbjct: 203 FEEMPEKDSFSWTILIDGLSKSGKLEAARYVFDRMPIRNSVSWNAMINGYMKAGYSNTAQ 262

Query: 656 DLFDVMGARNIITWNSMISGYELNGKFLEALRLYPMMLDE 775
           +LFD M  R+++TWNSMI+GYE N +F +AL+L+ +ML E
Sbjct: 263 ELFDQMPERSLVTWNSMITGYERNKQFTKALKLFEVMLRE 302


>ref|XP_012081524.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g48910-like [Jatropha curcas]
          Length = 674

 Score =  272 bits (695), Expect = 2e-70
 Identities = 147/279 (52%), Positives = 194/279 (69%), Gaps = 23/279 (8%)
 Frame = +2

Query: 5   KEVTQLHAQHIFTST---------ILS-------NNIEIPV-------KKTLFSYNTIIK 115
           KE  QLHA  + T+T         ILS       NN+E  +       + TL  +N IIK
Sbjct: 22  KETQQLHALSLKTNTFAHPSISSRILSLYADPKVNNLEYAISIFSKIQQPTLVLFNIIIK 81

Query: 116 RFLQNHLSQDALMVFVKLLCCPGLLPDEFTLPCAIKACANLGAVREGKMIHGLALKLGFG 295
            +++N LS DA+ +F +L+      PD FTLPC IK CA L A++EGK IHGL LKLGFG
Sbjct: 82  CYIENQLSHDAISLFSELI--HDFKPDCFTLPCVIKGCARLHAIKEGKQIHGLVLKLGFG 139

Query: 296 SGSGVHVESSLVRLYSKCGDINSARKLFDKMIVKDLVSWNVLLDGYVKCGGENIEVVLRL 475
                 V SSLV +Y+KC +I+SA K+F  M  KDLVSWN LLDGYVKCG   +E+ ++L
Sbjct: 140 FDK--FVLSSLVNMYAKCEEIDSAEKVFVSMDYKDLVSWNSLLDGYVKCG--QVELAMKL 195

Query: 476 FDEMPEKDVFTWTVLIDGLAKSGRVEEAREVFDSMLDKNVASWNAMINGYMKSGYYKLAR 655
           F+EMPE+D+F+WTVLIDG +KSG+V+ ARE+FD M D+N+ SWNAMINGYMKSG + LA 
Sbjct: 196 FEEMPERDLFSWTVLIDGFSKSGKVDVARELFDMMPDRNLVSWNAMINGYMKSGCFVLAS 255

Query: 656 DLFDVMGARNIITWNSMISGYELNGKFLEALRLYPMMLD 772
           +LF+ M  +N+I+WNSMI+GY+LNG++ EAL+L+  ML+
Sbjct: 256 ELFNRMPKKNLISWNSMIAGYDLNGRYREALQLFVHMLE 294



 Score = 82.8 bits (203), Expect = 2e-13
 Identities = 64/227 (28%), Positives = 116/227 (51%), Gaps = 10/227 (4%)
 Frame = +2

Query: 80  KKTLFSYNTIIKRFLQNHLSQDALMVFVKLLCCPGLLPDEFTLPCAIKACANLGAVREGK 259
           KK L S+N++I  +  N   ++AL +FV +L    + P   TL     A + + ++ +GK
Sbjct: 263 KKNLISWNSMIAGYDLNGRYREALQLFVHMLEGDSM-PSHATLVSVFSAVSGVASLSKGK 321

Query: 260 MIHGLALKLGFGSGSGVHVESSLVRLYSKCGDINSARKLFDKMIVKDLVSWNVLLDGYVK 439
            IH   +K GF    GV + +SL+ +YSKCG I SA  +F  +  K L  W  +L G   
Sbjct: 322 WIHSFMVKNGFEL-DGV-LATSLIDMYSKCGSIESALTVFQLIRRKKLGHWTAILVGLGM 379

Query: 440 CGGENIEVVLRLFDEMPEKDVFTWTVLIDGL----AKSGRVEEAREVFDSM-----LDKN 592
            G    E    LF+EM    +    ++  GL    + +G V++ R+ F  M     ++ +
Sbjct: 380 HG--MAEDAQELFNEMRRIGMKPHAIIFIGLLNACSHAGLVDDGRQYFKMMTNEYGIEPS 437

Query: 593 VASWNAMINGYMKSGYYKLARDLFDVM-GARNIITWNSMISGYELNG 730
           +  +  +++   ++G+ + A+++ + M  A N + W S++SG  ++G
Sbjct: 438 IEHYGCLVDILCRAGHLEEAKNIIEHMPRAPNKVIWMSLLSGARIHG 484


>ref|XP_004144616.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g48910-like [Cucumis sativus]
          Length = 681

 Score =  270 bits (689), Expect = 1e-69
 Identities = 132/230 (57%), Positives = 173/230 (75%)
 Frame = +2

Query: 86  TLFSYNTIIKRFLQNHLSQDALMVFVKLLCCPGLLPDEFTLPCAIKACANLGAVREGKMI 265
           TL S+N +IK +++N  S DA+ +F KLLC    +PD FTLPC +K CA LGA++EGK I
Sbjct: 79  TLVSWNLLIKCYIENQRSNDAIALFCKLLC--DFVPDSFTLPCVLKGCARLGALQEGKQI 136

Query: 266 HGLALKLGFGSGSGVHVESSLVRLYSKCGDINSARKLFDKMIVKDLVSWNVLLDGYVKCG 445
           HGL LK+GFG      V SSLV +YSKCG+I   RK+FD+M  KD+VSWN L+DGY +CG
Sbjct: 137 HGLVLKIGFGVDK--FVLSSLVSMYSKCGEIELCRKVFDRMEDKDVVSWNSLIDGYARCG 194

Query: 446 GENIEVVLRLFDEMPEKDVFTWTVLIDGLAKSGRVEEAREVFDSMLDKNVASWNAMINGY 625
              IE+ L +F+EMPEKD F+WT+LIDGL+KSG++E AR+VFD M  +N  SWNAMINGY
Sbjct: 195 --EIELALEMFEEMPEKDSFSWTILIDGLSKSGKLEAARDVFDRMPIRNSVSWNAMINGY 252

Query: 626 MKSGYYKLARDLFDVMGARNIITWNSMISGYELNGKFLEALRLYPMMLDE 775
           MK+G    A++LFD M  R+++TWNSMI+GYE N +F +AL+L+ +ML E
Sbjct: 253 MKAGDSNTAKELFDQMPERSLVTWNSMITGYERNKQFTKALKLFEVMLRE 302


>ref|XP_008342194.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Malus domestica]
          Length = 686

 Score =  268 bits (686), Expect = 2e-69
 Identities = 130/230 (56%), Positives = 175/230 (76%)
 Frame = +2

Query: 86  TLFSYNTIIKRFLQNHLSQDALMVFVKLLCCPGLLPDEFTLPCAIKACANLGAVREGKMI 265
           TL S+N +IK ++ N  S DA+++F +L+    L+PD FT+PC IK CA L A+ EGK I
Sbjct: 84  TLVSWNILIKGYVGNQRSHDAIVLFYELV--HELVPDNFTVPCVIKGCARLNAIEEGKQI 141

Query: 266 HGLALKLGFGSGSGVHVESSLVRLYSKCGDINSARKLFDKMIVKDLVSWNVLLDGYVKCG 445
           HGL LK+G G      V+SSLV LYSKCG+I  ARK+FD+M  +DLV+WN L+DGY +CG
Sbjct: 142 HGLVLKIGLGLDK--FVQSSLVNLYSKCGEIGLARKVFDQMRDRDLVTWNSLVDGYARCG 199

Query: 446 GENIEVVLRLFDEMPEKDVFTWTVLIDGLAKSGRVEEAREVFDSMLDKNVASWNAMINGY 625
              +EV + LFD+M E+D+F+WTVL+DGL+K G+VE AREVFD M ++N+ SWNAMINGY
Sbjct: 200 --EVEVAMELFDQMQERDLFSWTVLVDGLSKCGKVEMAREVFDRMPNRNLVSWNAMINGY 257

Query: 626 MKSGYYKLARDLFDVMGARNIITWNSMISGYELNGKFLEALRLYPMMLDE 775
           MK+G +++AR LF  M A+++ITWNSMI+GYE NG+F+EAL L+  +L E
Sbjct: 258 MKAGDFEMARQLFSGMPAKDVITWNSMIAGYEFNGRFMEALELFQEILKE 307



 Score = 91.3 bits (225), Expect = 6e-16
 Identities = 70/213 (32%), Positives = 108/213 (50%), Gaps = 11/213 (5%)
 Frame = +2

Query: 161 VKLLCCPGLLPDEFTLPCAIKACANLGAVREGKMIHGLALKLGFGSGSGVHVESSLVRLY 340
           + LL  P L P        ++ C  L   +E +  H L LK G  + S   V S  + LY
Sbjct: 8   LSLLHQPFLSPQTLNPFSLLQTCKTL---QEAEQHHALFLKTG--TFSHPSVASHFLSLY 62

Query: 341 S--KCGDINSARKLFDKMIVKDLVSWNVLLDGYVKCGGENIEVVLRLFDEMPEK---DVF 505
           +  K  ++  AR +FD++    LVSWN+L+ GYV  G +     + LF E+  +   D F
Sbjct: 63  ADPKINNLEYARSVFDQIDQPTLVSWNILIKGYV--GNQRSHDAIVLFYELVHELVPDNF 120

Query: 506 TWTVLIDGLAKSGRVEEAREVFDSM------LDKNVASWNAMINGYMKSGYYKLARDLFD 667
           T   +I G A+   +EE +++   +      LDK V S  +++N Y K G   LAR +FD
Sbjct: 121 TVPCVIKGCARLNAIEEGKQIHGLVLKIGLGLDKFVQS--SLVNLYSKCGEIGLARKVFD 178

Query: 668 VMGARNIITWNSMISGYELNGKFLEALRLYPMM 766
            M  R+++TWNS++ GY   G+   A+ L+  M
Sbjct: 179 QMRDRDLVTWNSLVDGYARCGEVEVAMELFDQM 211


>ref|XP_009365211.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Pyrus x bretschneideri]
          Length = 686

 Score =  268 bits (685), Expect = 3e-69
 Identities = 132/230 (57%), Positives = 173/230 (75%)
 Frame = +2

Query: 86  TLFSYNTIIKRFLQNHLSQDALMVFVKLLCCPGLLPDEFTLPCAIKACANLGAVREGKMI 265
           TL S+N +IK ++ N  S DA+++F +L+    L+PD FT+PC IK CA L A+ EGK I
Sbjct: 84  TLVSWNVLIKCYVGNQRSHDAIVLFYELV--HELVPDNFTVPCVIKGCARLNAIEEGKQI 141

Query: 266 HGLALKLGFGSGSGVHVESSLVRLYSKCGDINSARKLFDKMIVKDLVSWNVLLDGYVKCG 445
           HGL LK+G G      V+SSLV LYSKCG+I  ARK+FD+M  +DLV+WN L+DGY +CG
Sbjct: 142 HGLVLKIGLGLDK--FVQSSLVSLYSKCGEIGLARKVFDEMRDRDLVTWNSLVDGYARCG 199

Query: 446 GENIEVVLRLFDEMPEKDVFTWTVLIDGLAKSGRVEEAREVFDSMLDKNVASWNAMINGY 625
              +EV + LFDEM E+D+F+WTVL+DGL+K G+VE AREVFD M ++N  SWNAMINGY
Sbjct: 200 --EVEVAMELFDEMQERDLFSWTVLVDGLSKCGKVEMAREVFDRMPNRNSVSWNAMINGY 257

Query: 626 MKSGYYKLARDLFDVMGARNIITWNSMISGYELNGKFLEALRLYPMMLDE 775
           MK+G ++ AR LF  M AR++ITWNSMI+GYE NG+F+EAL L+  +L E
Sbjct: 258 MKAGDFETARQLFSGMPARDVITWNSMIAGYEFNGRFMEALELFQEILKE 307



 Score = 84.7 bits (208), Expect = 6e-14
 Identities = 69/213 (32%), Positives = 107/213 (50%), Gaps = 11/213 (5%)
 Frame = +2

Query: 161 VKLLCCPGLLPDEFTLPCAIKACANLGAVREGKMIHGLALKLGFGSGSGVHVESSLVRLY 340
           + LL  P L P        ++ C  L   +E +  H L LK G  + S   V S  + LY
Sbjct: 8   LSLLHKPFLSPQTLNPFRLLQTCKTL---QEAEQHHALFLKTG--TFSHPSVASCFLSLY 62

Query: 341 S--KCGDINSARKLFDKMIVKDLVSWNVLLDGYVKCGGENIEVVLRLFDEMPEK---DVF 505
           +  K   ++ AR +FD++    LVSWNVL+  YV  G +     + LF E+  +   D F
Sbjct: 63  ADPKINSLDYARSVFDQIEQPTLVSWNVLIKCYV--GNQRSHDAIVLFYELVHELVPDNF 120

Query: 506 TWTVLIDGLAKSGRVEEAREVFDSM------LDKNVASWNAMINGYMKSGYYKLARDLFD 667
           T   +I G A+   +EE +++   +      LDK V S  ++++ Y K G   LAR +FD
Sbjct: 121 TVPCVIKGCARLNAIEEGKQIHGLVLKIGLGLDKFVQS--SLVSLYSKCGEIGLARKVFD 178

Query: 668 VMGARNIITWNSMISGYELNGKFLEALRLYPMM 766
            M  R+++TWNS++ GY   G+   A+ L+  M
Sbjct: 179 EMRDRDLVTWNSLVDGYARCGEVEVAMELFDEM 211



 Score = 64.7 bits (156), Expect = 6e-08
 Identities = 56/226 (24%), Positives = 112/226 (49%), Gaps = 10/226 (4%)
 Frame = +2

Query: 83  KTLFSYNTIIKRFLQNHLSQDALMVFVKLLCCPGLLPDEFTLPCAIKACANLGAVREGKM 262
           + + ++N++I  +  N    +AL +F ++L    ++P   TL  A+ A + L  + +G+ 
Sbjct: 276 RDVITWNSMIAGYEFNGRFMEALELFQEILK-EDVMPSHATLVSALSAVSGLAILSKGRW 334

Query: 263 IHGLALKLGFGSGSGVHVESSLVRLYSKCGDINSARKLFDKMIVKDLVSWNVLLDGYVKC 442
           IH   +K GF    GV + +SL+ +YSKCG I +A  +F  +  K L  W  ++ G    
Sbjct: 335 IHSFMVKHGFEL-DGV-LGTSLIDMYSKCGSIENALTVFRAIHRKKLGHWTSIIVGLGMH 392

Query: 443 GGENIEVVLRLFDEMPEKDV----FTWTVLIDGLAKSGRVEEAREVFDSM-----LDKNV 595
           G    + VL LF EM +  +     T+  +++  + +G V+  R  F+ M     ++  +
Sbjct: 393 G--MADQVLELFLEMRKNGMQPHAITFIGVLNACSHAGLVDLGRFYFNLMTNDYGIEPTI 450

Query: 596 ASWNAMINGYMKSGYYKLARDLFDVMGAR-NIITWNSMISGYELNG 730
             +   ++   ++G    A+++ + M  + N + W S++S    +G
Sbjct: 451 EHYGCFVDILCRAGCLDEAKNVIESMPMKPNKVIWMSLLSSARNHG 496


>ref|XP_010657440.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g48910-like isoform X2 [Vitis vinifera]
          Length = 647

 Score =  267 bits (683), Expect = 5e-69
 Identities = 129/230 (56%), Positives = 177/230 (76%)
 Frame = +2

Query: 80  KKTLFSYNTIIKRFLQNHLSQDALMVFVKLLCCPGLLPDEFTLPCAIKACANLGAVREGK 259
           +++L  +NTIIK +++N  S D +++F +L+     LPD FTLPC IK CA LG V+EGK
Sbjct: 78  RRSLIHWNTIIKCYVENQFSHDGIVLFHELV--HEYLPDNFTLPCVIKGCARLGVVQEGK 135

Query: 260 MIHGLALKLGFGSGSGVHVESSLVRLYSKCGDINSARKLFDKMIVKDLVSWNVLLDGYVK 439
            IHGLALK+GFGS   V V+ SLV +YSKCG+I+ ARK+FD MI KD+V WN L+DGY +
Sbjct: 136 QIHGLALKIGFGSD--VFVQGSLVNMYSKCGEIDCARKVFDGMIDKDVVLWNSLIDGYAR 193

Query: 440 CGGENIEVVLRLFDEMPEKDVFTWTVLIDGLAKSGRVEEAREVFDSMLDKNVASWNAMIN 619
           CG   I++ L+LF+EMPE+D F+WTVL+DGL+K G+VE AR++FD M  +N+ SWNAMIN
Sbjct: 194 CG--EIDIALQLFEEMPERDAFSWTVLVDGLSKCGKVESARKLFDQMPCRNLVSWNAMIN 251

Query: 620 GYMKSGYYKLARDLFDVMGARNIITWNSMISGYELNGKFLEALRLYPMML 769
           GYMKSG +  A +LF  M   +++TWN MI+GYELNG+F++A++++ MML
Sbjct: 252 GYMKSGDFDSALELFYQMPIWDLVTWNLMIAGYELNGQFMDAVKMFFMML 301



 Score = 87.0 bits (214), Expect = 1e-14
 Identities = 67/244 (27%), Positives = 107/244 (43%), Gaps = 69/244 (28%)
 Frame = +2

Query: 242 AVREGKMIHGLALKLGFGSGSGVHVESSLVRLYS--KCGDINSARKLFDKMIVKDLVSWN 415
           A +E + +H  +LK    +     V S L+ LYS  K  D+  AR +FD++  + L+ WN
Sbjct: 28  APQEVEQLHAFSLKTAIFNHP--FVSSRLLALYSDPKINDLGYARSIFDRIQRRSLIHWN 85

Query: 416 VLLDGYVKCGGENIEVVL---RLFDEMPE------------------------------- 493
            ++  YV+    +  +VL    + + +P+                               
Sbjct: 86  TIIKCYVENQFSHDGIVLFHELVHEYLPDNFTLPCVIKGCARLGVVQEGKQIHGLALKIG 145

Query: 494 --KDVFTWTVLIDGLAKSGRVEEAREVFDSMLDKNVASWNAMINGY-------------- 625
              DVF    L++  +K G ++ AR+VFD M+DK+V  WN++I+GY              
Sbjct: 146 FGSDVFVQGSLVNMYSKCGEIDCARKVFDGMIDKDVVLWNSLIDGYARCGEIDIALQLFE 205

Query: 626 -----------------MKSGYYKLARDLFDVMGARNIITWNSMISGYELNGKFLEALRL 754
                             K G  + AR LFD M  RN+++WN+MI+GY  +G F  AL L
Sbjct: 206 EMPERDAFSWTVLVDGLSKCGKVESARKLFDQMPCRNLVSWNAMINGYMKSGDFDSALEL 265

Query: 755 YPMM 766
           +  M
Sbjct: 266 FYQM 269



 Score = 63.5 bits (153), Expect = 1e-07
 Identities = 49/189 (25%), Positives = 91/189 (48%), Gaps = 6/189 (3%)
 Frame = +2

Query: 89  LFSYNTIIKRFLQNHLSQDALMVFVKLLCCPGLLPDEFTLPCAIKACANLGAVREGKMIH 268
           L ++N +I  +  N    DA+ +F  +L   G  P   TL   + A + L  + +G+ IH
Sbjct: 274 LVTWNLMIAGYELNGQFMDAVKMFFMMLKL-GSRPSHATLVSVLSAVSGLAVLGKGRWIH 332

Query: 269 GLALKLGFGSGSGVHVESSLVRLYSKCGDINSARKLFDKMIVKDLVSWNVL-----LDGY 433
               K GF    G+ + +SL+ +Y+KCG I SA  +F  +  K +  W  +     + G 
Sbjct: 333 SYMEKNGFEL-DGI-LGTSLIEMYAKCGCIESALTVFRAIQKKKVGHWTAIIVGLGIHGL 390

Query: 434 VKCGGENIEVVLRLFDEMPEKDVFTWTVLIDGLAKSGRVEEAREVFDSM-LDKNVASWNA 610
           V  G +  ++++  +   P  +   +  L+D L ++G +EEA+   ++M +  N   W +
Sbjct: 391 VDDGRQYFDMMMNEYKIEPTLE--HYGCLVDILCRAGHLEEAKNTIENMPISPNKVIWMS 448

Query: 611 MINGYMKSG 637
           ++ G    G
Sbjct: 449 LLGGSRNHG 457


>ref|XP_010657439.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g48910-like isoform X1 [Vitis vinifera]
          Length = 682

 Score =  267 bits (683), Expect = 5e-69
 Identities = 129/230 (56%), Positives = 177/230 (76%)
 Frame = +2

Query: 80  KKTLFSYNTIIKRFLQNHLSQDALMVFVKLLCCPGLLPDEFTLPCAIKACANLGAVREGK 259
           +++L  +NTIIK +++N  S D +++F +L+     LPD FTLPC IK CA LG V+EGK
Sbjct: 78  RRSLIHWNTIIKCYVENQFSHDGIVLFHELV--HEYLPDNFTLPCVIKGCARLGVVQEGK 135

Query: 260 MIHGLALKLGFGSGSGVHVESSLVRLYSKCGDINSARKLFDKMIVKDLVSWNVLLDGYVK 439
            IHGLALK+GFGS   V V+ SLV +YSKCG+I+ ARK+FD MI KD+V WN L+DGY +
Sbjct: 136 QIHGLALKIGFGSD--VFVQGSLVNMYSKCGEIDCARKVFDGMIDKDVVLWNSLIDGYAR 193

Query: 440 CGGENIEVVLRLFDEMPEKDVFTWTVLIDGLAKSGRVEEAREVFDSMLDKNVASWNAMIN 619
           CG   I++ L+LF+EMPE+D F+WTVL+DGL+K G+VE AR++FD M  +N+ SWNAMIN
Sbjct: 194 CG--EIDIALQLFEEMPERDAFSWTVLVDGLSKCGKVESARKLFDQMPCRNLVSWNAMIN 251

Query: 620 GYMKSGYYKLARDLFDVMGARNIITWNSMISGYELNGKFLEALRLYPMML 769
           GYMKSG +  A +LF  M   +++TWN MI+GYELNG+F++A++++ MML
Sbjct: 252 GYMKSGDFDSALELFYQMPIWDLVTWNLMIAGYELNGQFMDAVKMFFMML 301



 Score = 87.0 bits (214), Expect = 1e-14
 Identities = 67/244 (27%), Positives = 107/244 (43%), Gaps = 69/244 (28%)
 Frame = +2

Query: 242 AVREGKMIHGLALKLGFGSGSGVHVESSLVRLYS--KCGDINSARKLFDKMIVKDLVSWN 415
           A +E + +H  +LK    +     V S L+ LYS  K  D+  AR +FD++  + L+ WN
Sbjct: 28  APQEVEQLHAFSLKTAIFNHP--FVSSRLLALYSDPKINDLGYARSIFDRIQRRSLIHWN 85

Query: 416 VLLDGYVKCGGENIEVVL---RLFDEMPE------------------------------- 493
            ++  YV+    +  +VL    + + +P+                               
Sbjct: 86  TIIKCYVENQFSHDGIVLFHELVHEYLPDNFTLPCVIKGCARLGVVQEGKQIHGLALKIG 145

Query: 494 --KDVFTWTVLIDGLAKSGRVEEAREVFDSMLDKNVASWNAMINGY-------------- 625
              DVF    L++  +K G ++ AR+VFD M+DK+V  WN++I+GY              
Sbjct: 146 FGSDVFVQGSLVNMYSKCGEIDCARKVFDGMIDKDVVLWNSLIDGYARCGEIDIALQLFE 205

Query: 626 -----------------MKSGYYKLARDLFDVMGARNIITWNSMISGYELNGKFLEALRL 754
                             K G  + AR LFD M  RN+++WN+MI+GY  +G F  AL L
Sbjct: 206 EMPERDAFSWTVLVDGLSKCGKVESARKLFDQMPCRNLVSWNAMINGYMKSGDFDSALEL 265

Query: 755 YPMM 766
           +  M
Sbjct: 266 FYQM 269



 Score = 65.9 bits (159), Expect = 3e-08
 Identities = 57/225 (25%), Positives = 109/225 (48%), Gaps = 10/225 (4%)
 Frame = +2

Query: 89  LFSYNTIIKRFLQNHLSQDALMVFVKLLCCPGLLPDEFTLPCAIKACANLGAVREGKMIH 268
           L ++N +I  +  N    DA+ +F  +L   G  P   TL   + A + L  + +G+ IH
Sbjct: 274 LVTWNLMIAGYELNGQFMDAVKMFFMMLKL-GSRPSHATLVSVLSAVSGLAVLGKGRWIH 332

Query: 269 GLALKLGFGSGSGVHVESSLVRLYSKCGDINSARKLFDKMIVKDLVSWNVLLDGYVKCGG 448
               K GF    G+ + +SL+ +Y+KCG I SA  +F  +  K +  W  ++ G    G 
Sbjct: 333 SYMEKNGFEL-DGI-LGTSLIEMYAKCGCIESALTVFRAIQKKKVGHWTAIIVGLGIHGM 390

Query: 449 ENIEVVLRLFDEMPEKDVFTWTVLIDGLAK----SGRVEEAREVFDSMLDK-----NVAS 601
            N    L LF EM +  +    ++  G+      +G V++ R+ FD M+++      +  
Sbjct: 391 AN--HALALFLEMCKTGLKPNAIIFIGVLNACNHAGLVDDGRQYFDMMMNEYKIEPTLEH 448

Query: 602 WNAMINGYMKSGYYKLARDLFDVMG-ARNIITWNSMISGYELNGK 733
           +  +++   ++G+ + A++  + M  + N + W S++ G   +GK
Sbjct: 449 YGCLVDILCRAGHLEEAKNTIENMPISPNKVIWMSLLGGSRNHGK 493


>ref|XP_008229896.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Prunus mume]
          Length = 684

 Score =  267 bits (682), Expect = 6e-69
 Identities = 130/230 (56%), Positives = 173/230 (75%)
 Frame = +2

Query: 86  TLFSYNTIIKRFLQNHLSQDALMVFVKLLCCPGLLPDEFTLPCAIKACANLGAVREGKMI 265
           TL S+N +IK ++ N  S DA+++F +LL    L+PD FT+PC +K CA L A+ EGK I
Sbjct: 82  TLVSWNVLIKCYVGNQRSHDAIILFYELL--HELVPDNFTVPCVMKGCARLNAIGEGKQI 139

Query: 266 HGLALKLGFGSGSGVHVESSLVRLYSKCGDINSARKLFDKMIVKDLVSWNVLLDGYVKCG 445
           HGL LK+G G      V+SSLV LYSKCG+I  ARK+FD+M+ +DLV+WN L+DGY +CG
Sbjct: 140 HGLVLKIGLGLDK--FVQSSLVSLYSKCGEIGLARKVFDQMLDRDLVTWNSLIDGYARCG 197

Query: 446 GENIEVVLRLFDEMPEKDVFTWTVLIDGLAKSGRVEEAREVFDSMLDKNVASWNAMINGY 625
              +EV + LFD+M E+D F+WTVL+DGL+K G+VE ARE+FD M  +N+ SWNAMINGY
Sbjct: 198 --EVEVAMELFDQMQERDSFSWTVLVDGLSKCGKVEMAREIFDRMPHRNLVSWNAMINGY 255

Query: 626 MKSGYYKLARDLFDVMGARNIITWNSMISGYELNGKFLEALRLYPMMLDE 775
            KSG +++AR LF  M  R+IITWNSMI+GYE NG+F+EAL L+  +L+E
Sbjct: 256 TKSGDFEMARQLFSRMPTRDIITWNSMIAGYEFNGQFMEALELFQEILEE 305



 Score = 84.3 bits (207), Expect = 7e-14
 Identities = 66/244 (27%), Positives = 107/244 (43%), Gaps = 71/244 (29%)
 Frame = +2

Query: 248 REGKMIHGLALKLGFGSGSGVHVESSLVRLYS--KCGDINSARKLFDKMIVKDLVSWNVL 421
           RE +  H ++LK G  S   +   S  + LY+  K  +++ AR +FD++    LVSWNVL
Sbjct: 32  REAEQHHAVSLKTGTFSHPAI--ASRFLSLYADPKINNLDYARSVFDQIEEPTLVSWNVL 89

Query: 422 LDGYVKCGGENIEVVLRLFDEMPEK----------------------------------- 496
           +  YV  G +     + LF E+  +                                   
Sbjct: 90  IKCYV--GNQRSHDAIILFYELLHELVPDNFTVPCVMKGCARLNAIGEGKQIHGLVLKIG 147

Query: 497 ---DVFTWTVLIDGLAKSGRVEEAREVFDSMLDKNVASWNAMINGY-------------- 625
              D F  + L+   +K G +  AR+VFD MLD+++ +WN++I+GY              
Sbjct: 148 LGLDKFVQSSLVSLYSKCGEIGLARKVFDQMLDRDLVTWNSLIDGYARCGEVEVAMELFD 207

Query: 626 -----------------MKSGYYKLARDLFDVMGARNIITWNSMISGYELNGKFLEALRL 754
                             K G  ++AR++FD M  RN+++WN+MI+GY  +G F  A +L
Sbjct: 208 QMQERDSFSWTVLVDGLSKCGKVEMAREIFDRMPHRNLVSWNAMINGYTKSGDFEMARQL 267

Query: 755 YPMM 766
           +  M
Sbjct: 268 FSRM 271



 Score = 70.5 bits (171), Expect = 1e-09
 Identities = 55/224 (24%), Positives = 111/224 (49%), Gaps = 8/224 (3%)
 Frame = +2

Query: 83  KTLFSYNTIIKRFLQNHLSQDALMVFVKLLCCPGLLPDEFTLPCAIKACANLGAVREGKM 262
           + + ++N++I  +  N    +AL +F ++L    ++P   TL  A+ A + L  + +G+ 
Sbjct: 274 RDIITWNSMIAGYEFNGQFMEALELFQEILE-EDIMPSHATLVSALSAVSGLATLSKGRW 332

Query: 263 IHGLALKLGFGSGSGVHVESSLVRLYSKCGDINSARKLFDKMIVKDLVSWNVLLDGYVKC 442
           IH   +K GF    GV + +SL+ +YSKCG I SA  +F  +  K L  W  ++ G    
Sbjct: 333 IHSFMVKHGFDL-DGV-LGTSLIEMYSKCGSIESALAVFRAIDRKKLGHWTAIIVGLGMH 390

Query: 443 G--GENIEVVLRLFDEMPEKDVFTWTVLIDGLAKSGRVEEAREVFDSM-----LDKNVAS 601
           G   + +EV L +       +  T+  +++  + +G V+  R  F+ M     ++  +  
Sbjct: 391 GMADQVLEVFLEMRKNGMHPNGITFVGVLNACSHAGLVDLGRYYFNLMINDYEIEPTIEH 450

Query: 602 WNAMINGYMKSGYYKLARDLFDVMGAR-NIITWNSMISGYELNG 730
           +   ++   ++G    A+++ + M  + N + W S++SG   +G
Sbjct: 451 YGCFVDILCRAGCLDEAKNVIESMPMKPNKVIWMSLLSGARNHG 494


>ref|XP_011461951.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like, partial [Fragaria vesca subsp. vesca]
          Length = 679

 Score =  266 bits (681), Expect = 8e-69
 Identities = 142/280 (50%), Positives = 188/280 (67%), Gaps = 23/280 (8%)
 Frame = +2

Query: 5   KEVTQLHAQHIFTSTILSNNI--------------EIPVKKTLFS---------YNTIIK 115
           KE TQLHA  + T    + +I               +P   ++FS         +N ++K
Sbjct: 27  KEATQLHALSLKTGAFTNPSIASRLLSLYANPSINHLPYALSVFSHLPNPNLISFNLLLK 86

Query: 116 RFLQNHLSQDALMVFVKLLCCPGLLPDEFTLPCAIKACANLGAVREGKMIHGLALKLGFG 295
             L NH S DAL++F +LL      PD FTLP  +KACA LGAV EGK +H LALK+G G
Sbjct: 87  SHLLNHRSHDALLLFFRLLHHHA--PDNFTLPSVVKACARLGAVAEGKQVHALALKIGLG 144

Query: 296 SGSGVHVESSLVRLYSKCGDINSARKLFDKMIVKDLVSWNVLLDGYVKCGGENIEVVLRL 475
               ++V+SSLV LYSKCG I  ARK+FD+M  +DLV+WN L+DGY +CG   ++V + L
Sbjct: 145 LE--MYVQSSLVSLYSKCGAIECARKVFDEMRERDLVAWNSLIDGYARCG--RVDVAVEL 200

Query: 476 FDEMPEKDVFTWTVLIDGLAKSGRVEEAREVFDSMLDKNVASWNAMINGYMKSGYYKLAR 655
           F+EM E+D F+WTVL+DGL+K G V++AREVF+ M  KNV SWNAMINGYMK G ++ AR
Sbjct: 201 FEEMEERDEFSWTVLVDGLSKCGHVKKAREVFERMPSKNVVSWNAMINGYMKGGEFEKAR 260

Query: 656 DLFDVMGARNIITWNSMISGYELNGKFLEALRLYPMMLDE 775
           +LF  MG+R++I+WNSMISGYE NG+F EAL L+  +L+E
Sbjct: 261 ELFGRMGSRDVISWNSMISGYEFNGRFGEALELFREVLEE 300



 Score = 69.7 bits (169), Expect = 2e-09
 Identities = 58/225 (25%), Positives = 115/225 (51%), Gaps = 10/225 (4%)
 Frame = +2

Query: 83  KTLFSYNTIIKRFLQNHLSQDALMVFVKLLCCPGLLPDEFTLPCAIKACANLGAVREGKM 262
           + + S+N++I  +  N    +AL +F ++L    + P   TL   + A + L A+ +G++
Sbjct: 269 RDVISWNSMISGYEFNGRFGEALELFREVLE-EDVRPTPATLVSVLSAVSGLAALSKGRI 327

Query: 263 IHGLALKLGFGSGSGVHVESSLVRLYSKCGDINSARKLFDKMIVKDLVSWNVLLDGYVKC 442
           +H + +K GF    GV + +SL+ +YSKCG I+SA  +F+ +  K +  W  ++ G    
Sbjct: 328 VHSVMVKHGFEL-EGV-LGTSLIDMYSKCGSIDSAMAVFEGIQRKKVGHWTAIIVGLGMH 385

Query: 443 GGENIEVVLRLFDEM----PEKDVFTWTVLIDGLAKSGRVEEAREVFDSM-----LDKNV 595
           G    + VL+LF EM     E    T+  +++  + +G V+  R  F+ M     ++  +
Sbjct: 386 G--MADQVLQLFLEMRTNGMEPHGITFIGILNACSHAGLVDLGRYYFNMMRKDYGIEPTI 443

Query: 596 ASWNAMINGYMKSGYYKLARDLFDVMGAR-NIITWNSMISGYELN 727
             +  +++   ++G    A+D+   M  + N   W S++SG  ++
Sbjct: 444 EHYGCLVDILCRAGCLDEAKDIIGSMPMKPNKFIWMSLLSGARIH 488


>ref|XP_002531691.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223528667|gb|EEF30682.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 434

 Score =  265 bits (678), Expect = 2e-68
 Identities = 145/279 (51%), Positives = 189/279 (67%), Gaps = 23/279 (8%)
 Frame = +2

Query: 5   KEVTQLHAQHIFTST---------ILS-------NNIEIPV-------KKTLFSYNTIIK 115
           KE  QLHA  + T+T         +LS       NN+E  +       +  L  YN +IK
Sbjct: 22  KETKQLHALSVKTNTFSHPSISSCLLSLYAEPKINNLEYVLSIFNKIQEPALVLYNILIK 81

Query: 116 RFLQNHLSQDALMVFVKLLCCPGLLPDEFTLPCAIKACANLGAVREGKMIHGLALKLGFG 295
            ++QN LS DA+ +F +LL      PD FTLPC IK CA L A +EGK IHGL LKLGFG
Sbjct: 82  CYIQNQLSHDAITLFSQLL--HEFNPDGFTLPCVIKGCARLHATKEGKQIHGLVLKLGFG 139

Query: 296 SGSGVHVESSLVRLYSKCGDINSARKLFDKMIVKDLVSWNVLLDGYVKCGGENIEVVLRL 475
                 V SSLV +YSKC DI+SA+K+F  M  KDLVSWN L+DGYVKCG   +E+ ++L
Sbjct: 140 LNK--FVSSSLVNMYSKCKDIDSAKKVFLSMDDKDLVSWNSLIDGYVKCG--QVELGMKL 195

Query: 476 FDEMPEKDVFTWTVLIDGLAKSGRVEEAREVFDSMLDKNVASWNAMINGYMKSGYYKLAR 655
           F+EMPE+D+F+WTVLIDG +K G+V+ ARE+FD M  +N+ SWNAMINGYMK+G + LA 
Sbjct: 196 FEEMPERDLFSWTVLIDGFSKCGKVDVARELFDKMPSRNLVSWNAMINGYMKAGDFVLAS 255

Query: 656 DLFDVMGARNIITWNSMISGYELNGKFLEALRLYPMMLD 772
           +LFD M  +N+I+WNSM++GY+LN +F EAL L+  ML+
Sbjct: 256 ELFDKMPEKNLISWNSMVAGYDLNERFKEALDLFLTMLE 294



 Score = 67.0 bits (162), Expect = 1e-08
 Identities = 50/171 (29%), Positives = 85/171 (49%), Gaps = 4/171 (2%)
 Frame = +2

Query: 80  KKTLFSYNTIIKRFLQNHLSQDALMVFVKLLCCPGLLPDEFTLPCAIKACANLGAVREGK 259
           +K L S+N+++  +  N   ++AL +F+ +L      P+  TL     A + L ++  GK
Sbjct: 263 EKNLISWNSMVAGYDLNERFKEALDLFLTMLE-RDFTPNHATLVSTFSAVSGLASLSTGK 321

Query: 260 MIHGLALKLGFGSGSGVHVESSLVRLYSKCGDINSARKLFDKMIVKDLVSWNVLLDGYVK 439
            +H   +K GF    GV + +SL+ +YSKCG+I SA  +F  +  K L  W  ++ G   
Sbjct: 322 WMHSYMVKNGFQL-DGV-LATSLINMYSKCGNIESALSVFQLITKKKLGHWTAIIVGLGM 379

Query: 440 CGGENIEVVLRLFDEM----PEKDVFTWTVLIDGLAKSGRVEEAREVFDSM 580
            G    +  L  F EM          T+  +++  + +G VE+ R+ FD M
Sbjct: 380 HG--MADNALEFFHEMCRTGMRPHAITFIGVLNACSHAGLVEDGRKYFDMM 428


>ref|XP_008379986.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Malus domestica]
          Length = 686

 Score =  264 bits (675), Expect = 4e-68
 Identities = 130/230 (56%), Positives = 172/230 (74%)
 Frame = +2

Query: 86  TLFSYNTIIKRFLQNHLSQDALMVFVKLLCCPGLLPDEFTLPCAIKACANLGAVREGKMI 265
           +L S+N +IK ++ N  S DA+++F +L+    L+PD FT+PC IK CA L A+ EGK I
Sbjct: 84  SLVSWNVLIKCYVGNQRSHDAIVLFYELV--HELVPDHFTVPCVIKGCARLNAIEEGKQI 141

Query: 266 HGLALKLGFGSGSGVHVESSLVRLYSKCGDINSARKLFDKMIVKDLVSWNVLLDGYVKCG 445
           HGL LK+G G      V+SSLV LYSKCG+I  ARK+FD+M  +DLV+WN L+DGY +CG
Sbjct: 142 HGLVLKIGLGLDK--FVQSSLVSLYSKCGEIGLARKVFDEMRDRDLVTWNSLVDGYARCG 199

Query: 446 GENIEVVLRLFDEMPEKDVFTWTVLIDGLAKSGRVEEAREVFDSMLDKNVASWNAMINGY 625
              +EV + LFD+M E+D+F+WTVL+DGL+K G+VE AREVFD M ++N  SWNAMINGY
Sbjct: 200 --EVEVAMELFDQMQERDLFSWTVLVDGLSKCGKVEMAREVFDRMPNRNSVSWNAMINGY 257

Query: 626 MKSGYYKLARDLFDVMGARNIITWNSMISGYELNGKFLEALRLYPMMLDE 775
           MK+G  + AR LF  M AR++ITWNSMI+GYE NG+F+EAL L+  +L E
Sbjct: 258 MKAGEVETARQLFSGMPARDVITWNSMIAGYEFNGRFMEALELFQEILKE 307



 Score = 87.0 bits (214), Expect = 1e-14
 Identities = 69/213 (32%), Positives = 108/213 (50%), Gaps = 11/213 (5%)
 Frame = +2

Query: 161 VKLLCCPGLLPDEFTLPCAIKACANLGAVREGKMIHGLALKLGFGSGSGVHVESSLVRLY 340
           + LL  P L P        ++ C  L   +E +  H L LK G  + S   V S  + LY
Sbjct: 8   LSLLHKPFLSPQTLNPFSLLQTCKTL---QEAZQHHALFLKTG--TFSHPSVASCFLSLY 62

Query: 341 S--KCGDINSARKLFDKMIVKDLVSWNVLLDGYVKCGGENIEVVLRLFDEMPEK---DVF 505
           +  K  +++ AR +FD++    LVSWNVL+  YV  G +     + LF E+  +   D F
Sbjct: 63  ADPKINNLDYARSVFDQIEQPSLVSWNVLIKCYV--GNQRSHDAIVLFYELVHELVPDHF 120

Query: 506 TWTVLIDGLAKSGRVEEAREVFDSM------LDKNVASWNAMINGYMKSGYYKLARDLFD 667
           T   +I G A+   +EE +++   +      LDK V S  ++++ Y K G   LAR +FD
Sbjct: 121 TVPCVIKGCARLNAIEEGKQIHGLVLKIGLGLDKFVQS--SLVSLYSKCGEIGLARKVFD 178

Query: 668 VMGARNIITWNSMISGYELNGKFLEALRLYPMM 766
            M  R+++TWNS++ GY   G+   A+ L+  M
Sbjct: 179 EMRDRDLVTWNSLVDGYARCGEVEVAMELFDQM 211



 Score = 67.0 bits (162), Expect = 1e-08
 Identities = 57/226 (25%), Positives = 113/226 (50%), Gaps = 10/226 (4%)
 Frame = +2

Query: 83  KTLFSYNTIIKRFLQNHLSQDALMVFVKLLCCPGLLPDEFTLPCAIKACANLGAVREGKM 262
           + + ++N++I  +  N    +AL +F ++L    ++P   TL  A+ A + L  + +G+ 
Sbjct: 276 RDVITWNSMIAGYEFNGRFMEALELFQEILK-EDVMPSHATLVSALSAVSGLAILSKGRW 334

Query: 263 IHGLALKLGFGSGSGVHVESSLVRLYSKCGDINSARKLFDKMIVKDLVSWNVLLDGYVKC 442
           IH   +K GF    GV + +SL+ +YSKCG I +A  +F  +  K L  W  ++ G    
Sbjct: 335 IHSFMVKHGFEL-DGV-LGTSLIDMYSKCGSIENALTVFRAIHRKKLGHWTSIIVGLGMH 392

Query: 443 GGENIEVVLRLFDEMPEKDV----FTWTVLIDGLAKSGRVEEAREVFDSM-----LDKNV 595
           G    + VL LF EM +  +     T+  +++  + +G V+  R  F+ M     ++  +
Sbjct: 393 G--MADQVLELFLEMRKNGMQPHAITFIGVLNACSHAGLVDLGRFYFNLMTNDYGIEPTI 450

Query: 596 ASWNAMINGYMKSGYYKLARDLFDVMGAR-NIITWNSMISGYELNG 730
             +   ++   ++G    A+++ + M  + N + W S++SG   +G
Sbjct: 451 EHYGCFVDILCRAGCLDEAKNVIESMPMKPNKVIWMSLLSGARNHG 496


>ref|XP_010045870.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Eucalyptus grandis]
           gi|629124266|gb|KCW88691.1| hypothetical protein
           EUGRSUZ_A01046 [Eucalyptus grandis]
          Length = 688

 Score =  261 bits (666), Expect = 4e-67
 Identities = 131/227 (57%), Positives = 167/227 (73%)
 Frame = +2

Query: 95  SYNTIIKRFLQNHLSQDALMVFVKLLCCPGLLPDEFTLPCAIKACANLGAVREGKMIHGL 274
           S+N IIK  ++N  S DAL +F +L+      PD FTLPC IK CA L AV EGK +HGL
Sbjct: 89  SWNVIIKCCVENRHSHDALCLFRELV--GECTPDGFTLPCVIKGCARLSAVEEGKQVHGL 146

Query: 275 ALKLGFGSGSGVHVESSLVRLYSKCGDINSARKLFDKMIVKDLVSWNVLLDGYVKCGGEN 454
           ALK+G GS     VESSLV +YSKCG I SARK+FD M  KDLV WN L+DGY +CG   
Sbjct: 147 ALKIGLGSDK--FVESSLVSMYSKCGSIASARKVFDGMDDKDLVCWNALIDGYARCG--E 202

Query: 455 IEVVLRLFDEMPEKDVFTWTVLIDGLAKSGRVEEAREVFDSMLDKNVASWNAMINGYMKS 634
           IE  L +F+EMPE+D F+WTVL+DGL+KSG++E ARE+F+ M  +++ SWNAM+NGYMKS
Sbjct: 203 IERALEVFNEMPERDAFSWTVLVDGLSKSGKIEAAREIFEKMPSRSLVSWNAMVNGYMKS 262

Query: 635 GYYKLARDLFDVMGARNIITWNSMISGYELNGKFLEALRLYPMMLDE 775
           G +  AR LF+ M  R++ITWNSMI+GY+LNG+F EAL ++  +L E
Sbjct: 263 GDFNSARKLFEDMPTRDLITWNSMIAGYDLNGRFKEALDMFNSLLKE 309



 Score = 80.9 bits (198), Expect = 8e-13
 Identities = 72/253 (28%), Positives = 110/253 (43%), Gaps = 75/253 (29%)
 Frame = +2

Query: 233 NLGAVREGKMIHGLALKLGFGSGSGVH--VESSLVRLYS--KCGDINSARKLFDKMIVKD 400
           N    RE + +H L+LK    SG+  H    + L+ LY+  +  D+  AR +FD++    
Sbjct: 31  NCRTARETRQVHALSLK----SGAFDHPPTAAKLLALYAAPEINDLRHARSVFDRIPHPP 86

Query: 401 LVSWNVLLDGYVKCGGEN--IEVVLRLFDEMPEK---DVFTWTVLIDGLAKSGRVEE--- 556
           L SWNV+    +KC  EN      L LF E+  +   D FT   +I G A+   VEE   
Sbjct: 87  LPSWNVI----IKCCVENRHSHDALCLFRELVGECTPDGFTLPCVIKGCARLSAVEEGKQ 142

Query: 557 --------------------------------AREVFDSMLDKNVASWNAMINGY----- 625
                                           AR+VFD M DK++  WNA+I+GY     
Sbjct: 143 VHGLALKIGLGSDKFVESSLVSMYSKCGSIASARKVFDGMDDKDLVCWNALIDGYARCGE 202

Query: 626 --------------------------MKSGYYKLARDLFDVMGARNIITWNSMISGYELN 727
                                      KSG  + AR++F+ M +R++++WN+M++GY  +
Sbjct: 203 IERALEVFNEMPERDAFSWTVLVDGLSKSGKIEAAREIFEKMPSRSLVSWNAMVNGYMKS 262

Query: 728 GKFLEALRLYPMM 766
           G F  A +L+  M
Sbjct: 263 GDFNSARKLFEDM 275



 Score = 77.4 bits (189), Expect = 9e-12
 Identities = 61/226 (26%), Positives = 111/226 (49%), Gaps = 10/226 (4%)
 Frame = +2

Query: 83  KTLFSYNTIIKRFLQNHLSQDALMVFVKLLCCPGLLPDEFTLPCAIKACANLGAVREGKM 262
           + L ++N++I  +  N   ++AL +F  LL   G +P+  TL CA+ + + L  +  G  
Sbjct: 278 RDLITWNSMIAGYDLNGRFKEALDMFNSLLK-EGFVPNHATLVCALSSVSGLATLSTGSC 336

Query: 263 IHGLALKLGFGSGSGVHVESSLVRLYSKCGDINSARKLFDKMIVKDLVSWNVLLDGYVKC 442
           IH   +K       GV + +SL+ +YSKCG I SA  +F  +  K L  W  ++ G    
Sbjct: 337 IHSYMVKNEHPL-DGV-LGTSLIEMYSKCGSIESALAIFHSISKKKLGHWTAIIVGLGMH 394

Query: 443 GGENIEVVLRLFDEMPEKDV----FTWTVLIDGLAKSGRVEEAREVFDSM-----LDKNV 595
           G       L+LF EM +  V     T+  +I+    +G V+  R  F+ M     ++  +
Sbjct: 395 G--MASPALQLFAEMRKAGVKPNAITFVGVINACNHAGLVDHGRHYFEMMQKEYGIEPTM 452

Query: 596 ASWNAMINGYMKSGYYKLARDLFDVMGAR-NIITWNSMISGYELNG 730
             +  +++   ++G+ K A+ + + M  + N + W S++SG  + G
Sbjct: 453 EHYGCLVDLLCRAGHVKEAKYVINTMPMKPNKVMWMSLLSGSRIQG 498


>ref|XP_010112786.1| hypothetical protein L484_020017 [Morus notabilis]
           gi|587948648|gb|EXC34901.1| hypothetical protein
           L484_020017 [Morus notabilis]
          Length = 686

 Score =  260 bits (665), Expect = 6e-67
 Identities = 134/235 (57%), Positives = 170/235 (72%)
 Frame = +2

Query: 71  IPVKKTLFSYNTIIKRFLQNHLSQDALMVFVKLLCCPGLLPDEFTLPCAIKACANLGAVR 250
           IPV   L S+N +IK +++N  S DA+ +F  L+      PD FTLP  IK CA L AV 
Sbjct: 80  IPVPD-LVSWNILIKCYVENQRSHDAICLFHDLV--HEFTPDCFTLPSVIKGCARLNAVP 136

Query: 251 EGKMIHGLALKLGFGSGSGVHVESSLVRLYSKCGDINSARKLFDKMIVKDLVSWNVLLDG 430
           EGK IHGL +K+GFG      V+SSLV +YS+CG++  ARK+FD+M  KDLV WN L+DG
Sbjct: 137 EGKQIHGLVVKIGFGLDK--FVQSSLVSMYSRCGEMGYARKVFDQMGEKDLVLWNCLIDG 194

Query: 431 YVKCGGENIEVVLRLFDEMPEKDVFTWTVLIDGLAKSGRVEEAREVFDSMLDKNVASWNA 610
           Y +CG   +E+ L+LFDEMPE+D F+WT L+DG +K GRVE AR+VFD M  +N+ SWNA
Sbjct: 195 YARCG--EVEIALQLFDEMPERDYFSWTCLVDGFSKCGRVEMARDVFDRMPSRNLVSWNA 252

Query: 611 MINGYMKSGYYKLARDLFDVMGARNIITWNSMISGYELNGKFLEALRLYPMMLDE 775
           MINGYMKSG  ++AR LFD M  R++ITWNSMI+GYE NGKF+EAL L+  ML E
Sbjct: 253 MINGYMKSGDVEMARRLFDEMPTRDVITWNSMIAGYEFNGKFMEALYLFIAMLKE 307



 Score = 81.6 bits (200), Expect = 5e-13
 Identities = 63/226 (27%), Positives = 114/226 (50%), Gaps = 10/226 (4%)
 Frame = +2

Query: 68  EIPVKKTLFSYNTIIKRFLQNHLSQDALMVFVKLLCCPGLLPDEFTLPCAIKACANLGAV 247
           E+P +  + ++N++I  +  N    +AL +F+ +L   GL+P+  T   A+ A + L  +
Sbjct: 272 EMPTRDVI-TWNSMIAGYEFNGKFMEALYLFIAMLK-EGLVPNHTTFVGALSAVSGLAVL 329

Query: 248 REGKMIHGLALKLGFGSGSGVHVESSLVRLYSKCGDINSARKLFDKMIVKDLVSWNVLLD 427
            +GK IH L +K G  S  GV + +SL+ +YSKCG + SA  +F  +  K L  W  ++ 
Sbjct: 330 SKGKWIHSLMVKCGIES-EGV-LGTSLIEMYSKCGSVESALSVFRAISKKKLGHWTAIIV 387

Query: 428 GYVKCGGENIEVVLRLFDEMP----EKDVFTWTVLIDGLAKSGRVEEAREVFDSM----- 580
           G    G    E  L +F EM     +    T+  +++  + +G VE  R  F+ M     
Sbjct: 388 GLGMHG--MAERALEMFSEMRRTGLQPHAITFLGVLNACSHAGLVELVRHYFNMMTNDYG 445

Query: 581 LDKNVASWNAMINGYMKSGYYKLARDLFDVMGAR-NIITWNSMISG 715
           ++  +  +  ++    + G  + A+D+ + M  R N + W S++SG
Sbjct: 446 IEPTIEHYGCLVFILCRVGNLEEAKDIIEGMPMRPNKVIWMSLLSG 491


>ref|XP_012485806.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Gossypium raimondii]
           gi|763742755|gb|KJB10254.1| hypothetical protein
           B456_001G191900 [Gossypium raimondii]
          Length = 682

 Score =  259 bits (662), Expect = 1e-66
 Identities = 131/230 (56%), Positives = 168/230 (73%)
 Frame = +2

Query: 86  TLFSYNTIIKRFLQNHLSQDALMVFVKLLCCPGLLPDEFTLPCAIKACANLGAVREGKMI 265
           +L  +N I+K ++QN  S +A+ +FV LL      PDEFT PC IKACA L A++EGK I
Sbjct: 80  SLVLWNIILKCYIQNQQSHEAISLFVLLL--GHFPPDEFTFPCVIKACAKLTALKEGKQI 137

Query: 266 HGLALKLGFGSGSGVHVESSLVRLYSKCGDINSARKLFDKMIVKDLVSWNVLLDGYVKCG 445
           HGL LKLGFG      V++SLV LYSKCG+I S   +FD+M  KDLVSWN LLDGY +CG
Sbjct: 138 HGLVLKLGFGLDK--FVQASLVNLYSKCGEIGSGYTVFDQMDDKDLVSWNSLLDGYARCG 195

Query: 446 GENIEVVLRLFDEMPEKDVFTWTVLIDGLAKSGRVEEAREVFDSMLDKNVASWNAMINGY 625
              ++  +++FDEMPEKD F+WTVLIDGLAK G VE AR++F++M ++N+ SWN MINGY
Sbjct: 196 --EVKAAMKVFDEMPEKDCFSWTVLIDGLAKCGEVETARKIFENMPNRNLVSWNTMINGY 253

Query: 626 MKSGYYKLARDLFDVMGARNIITWNSMISGYELNGKFLEALRLYPMMLDE 775
           MK+G    A  LFD M  RN+ITWNSMI G++LN +FLEAL ++  ML+E
Sbjct: 254 MKAGDTNSACKLFDQMPTRNLITWNSMIGGFKLNLRFLEALEMFERMLEE 303



 Score = 68.2 bits (165), Expect = 5e-09
 Identities = 53/212 (25%), Positives = 93/212 (43%), Gaps = 39/212 (18%)
 Frame = +2

Query: 248 REGKMIHGLALKLGFGSGSGVHVESSLVRLYS--KCGDINSARKLFDKMIVKDLVSWNVL 421
           +E + +H  +LK    S   +   S L+ LY+     ++  AR +FD++    LV WN++
Sbjct: 30  QETQQLHAFSLKTAVFSHPSL--SSRLLSLYADPNINNLRYARSVFDRIQHPSLVLWNII 87

Query: 422 LDGYV--KCGGENIEVVLRLFDEMPEKDVFTWTVLIDGLAKSGRVEEARE---------- 565
           L  Y+  +   E I + + L    P  D FT+  +I   AK   ++E ++          
Sbjct: 88  LKCYIQNQQSHEAISLFVLLLGHFP-PDEFTFPCVIKACAKLTALKEGKQIHGLVLKLGF 146

Query: 566 -------------------------VFDSMLDKNVASWNAMINGYMKSGYYKLARDLFDV 670
                                    VFD M DK++ SWN++++GY + G  K A  +FD 
Sbjct: 147 GLDKFVQASLVNLYSKCGEIGSGYTVFDQMDDKDLVSWNSLLDGYARCGEVKAAMKVFDE 206

Query: 671 MGARNIITWNSMISGYELNGKFLEALRLYPMM 766
           M  ++  +W  +I G    G+   A +++  M
Sbjct: 207 MPEKDCFSWTVLIDGLAKCGEVETARKIFENM 238



 Score = 66.2 bits (160), Expect = 2e-08
 Identities = 56/221 (25%), Positives = 110/221 (49%), Gaps = 10/221 (4%)
 Frame = +2

Query: 83  KTLFSYNTIIKRFLQNHLSQDALMVFVKLLCCPGLLPDEFTLPCAIKACANLGAVREGKM 262
           + L ++N++I  F  N    +AL +F ++L      P   TL   I A + L ++  G++
Sbjct: 272 RNLITWNSMIGGFKLNLRFLEALEMFERMLE-EEFRPTHATLVSVISAVSGLASLGTGRL 330

Query: 263 IHGLALKLGFGSGSGVHVESSLVRLYSKCGDINSARKLFDKMIVKDLVSWNVLLDGYVKC 442
           IH   +K G     GV V + L+ +YSKCG I+SA  +F  +  K L  W  ++ G    
Sbjct: 331 IHSYIVKNGIEL-DGV-VGTVLIEMYSKCGGIDSAVTVFRTISHKKLGHWTAIIVGLSIH 388

Query: 443 GGENIEVVLRLFDEM----PEKDVFTWTVLIDGLAKSGRVEEAREVFDSMLDK-----NV 595
           G    +  L+LF EM     + +  T+  +++  +  G + +  + F+ M+++      +
Sbjct: 389 G--MADHALKLFLEMRRIGVKPNAITFVGVLNACSHVGLINDGHKYFNMMINEYGIKPAI 446

Query: 596 ASWNAMINGYMKSGYYKLARDLFDVMGAR-NIITWNSMISG 715
             +  +++   ++G  + A+D+ + M  R N + W +++SG
Sbjct: 447 EHYGCLVDILCRAGCLEEAKDIIEEMPMRPNKVIWMTLLSG 487


>ref|XP_010557708.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like isoform X2 [Tarenaya hassleriana]
          Length = 634

 Score =  254 bits (649), Expect = 4e-65
 Identities = 125/229 (54%), Positives = 167/229 (72%)
 Frame = +2

Query: 86  TLFSYNTIIKRFLQNHLSQDALMVFVKLLCCPGLLPDEFTLPCAIKACANLGAVREGKMI 265
           +L  +N IIK +++NH S DA+ +F  L+      PD FT PC IK C+ L AV EGK I
Sbjct: 81  SLVLWNMIIKCYIENHRSHDAISLFCLLV--REFPPDNFTFPCVIKGCSRLNAVEEGKQI 138

Query: 266 HGLALKLGFGSGSGVHVESSLVRLYSKCGDINSARKLFDKMIVKDLVSWNVLLDGYVKCG 445
           HG ALKLGF       V+SSLV LYSKCG I SA K+FD M  KDLV+WN L+DGY + G
Sbjct: 139 HGFALKLGFALDK--FVQSSLVSLYSKCGSIESACKVFDNMAEKDLVTWNSLIDGYARSG 196

Query: 446 GENIEVVLRLFDEMPEKDVFTWTVLIDGLAKSGRVEEAREVFDSMLDKNVASWNAMINGY 625
              +E+ L++FDEMPE+D F+WT L+DG +KSG++E+ARE+F  M +K++ SWNAMINGY
Sbjct: 197 --QVEIALKVFDEMPERDSFSWTALLDGFSKSGKIEDAREIFSKMPNKSLVSWNAMINGY 254

Query: 626 MKSGYYKLARDLFDVMGARNIITWNSMISGYELNGKFLEALRLYPMMLD 772
           MKSG  + AR LF+ M +R+++TWNS+I+GYE+NG+F EA R++  ML+
Sbjct: 255 MKSGDPESARRLFNRMPSRDLVTWNSIIAGYEINGRFKEAFRMFFRMLE 303



 Score = 66.2 bits (160), Expect = 2e-08
 Identities = 50/166 (30%), Positives = 84/166 (50%)
 Frame = +2

Query: 83  KTLFSYNTIIKRFLQNHLSQDALMVFVKLLCCPGLLPDEFTLPCAIKACANLGAVREGKM 262
           + L ++N+II  +  N   ++A  +F ++L      P + TL   I A +    +  G  
Sbjct: 273 RDLVTWNSIIAGYEINGRFKEAFRMFFRMLE-HDFKPSDATLVSVISAVSESAILSWGTW 331

Query: 263 IHGLALKLGFGSGSGVHVESSLVRLYSKCGDINSARKLFDKMIVKDLVSWNVLLDGYVKC 442
           IH   +K G   G GV + + L+ +YSKCG I +A  +F  +  K L  WN ++ G    
Sbjct: 332 IHSYMIKNGIEPG-GV-IGTLLIEMYSKCGSIENALSVFQVIRRKKLGHWNSIIAGLGMH 389

Query: 443 GGENIEVVLRLFDEMPEKDVFTWTVLIDGLAKSGRVEEAREVFDSM 580
           G  N    L LF++M E+DV         L ++G +EEA+++ ++M
Sbjct: 390 GMAN--KALELFNKMRERDV---------LCRTGHLEEAKDIVENM 424


>ref|XP_010557707.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like isoform X1 [Tarenaya hassleriana]
          Length = 683

 Score =  254 bits (649), Expect = 4e-65
 Identities = 125/229 (54%), Positives = 167/229 (72%)
 Frame = +2

Query: 86  TLFSYNTIIKRFLQNHLSQDALMVFVKLLCCPGLLPDEFTLPCAIKACANLGAVREGKMI 265
           +L  +N IIK +++NH S DA+ +F  L+      PD FT PC IK C+ L AV EGK I
Sbjct: 81  SLVLWNMIIKCYIENHRSHDAISLFCLLV--REFPPDNFTFPCVIKGCSRLNAVEEGKQI 138

Query: 266 HGLALKLGFGSGSGVHVESSLVRLYSKCGDINSARKLFDKMIVKDLVSWNVLLDGYVKCG 445
           HG ALKLGF       V+SSLV LYSKCG I SA K+FD M  KDLV+WN L+DGY + G
Sbjct: 139 HGFALKLGFALDK--FVQSSLVSLYSKCGSIESACKVFDNMAEKDLVTWNSLIDGYARSG 196

Query: 446 GENIEVVLRLFDEMPEKDVFTWTVLIDGLAKSGRVEEAREVFDSMLDKNVASWNAMINGY 625
              +E+ L++FDEMPE+D F+WT L+DG +KSG++E+ARE+F  M +K++ SWNAMINGY
Sbjct: 197 --QVEIALKVFDEMPERDSFSWTALLDGFSKSGKIEDAREIFSKMPNKSLVSWNAMINGY 254

Query: 626 MKSGYYKLARDLFDVMGARNIITWNSMISGYELNGKFLEALRLYPMMLD 772
           MKSG  + AR LF+ M +R+++TWNS+I+GYE+NG+F EA R++  ML+
Sbjct: 255 MKSGDPESARRLFNRMPSRDLVTWNSIIAGYEINGRFKEAFRMFFRMLE 303



 Score = 68.9 bits (167), Expect = 3e-09
 Identities = 56/209 (26%), Positives = 102/209 (48%), Gaps = 9/209 (4%)
 Frame = +2

Query: 83  KTLFSYNTIIKRFLQNHLSQDALMVFVKLLCCPGLLPDEFTLPCAIKACANLGAVREGKM 262
           + L ++N+II  +  N   ++A  +F ++L      P + TL   I A +    +  G  
Sbjct: 273 RDLVTWNSIIAGYEINGRFKEAFRMFFRMLE-HDFKPSDATLVSVISAVSESAILSWGTW 331

Query: 263 IHGLALKLGFGSGSGVHVESSLVRLYSKCGDINSARKLFDKMIVKDLVSWNVLLDGYVKC 442
           IH   +K G   G GV + + L+ +YSKCG I +A  +F  +  K L  WN ++ G    
Sbjct: 332 IHSYMIKNGIEPG-GV-IGTLLIEMYSKCGSIENALSVFQVIRRKKLGHWNSIIAGLGMH 389

Query: 443 GGENIEVVLRLFDEMPEK----DVFTWTVLIDGLAKSGRVEEAREVFDSM-----LDKNV 595
           G  N    L LF++M E+    +  T+  +++  + +G V EAR  F  M     ++  V
Sbjct: 390 GMAN--KALELFNKMRERGTEPNAITFVGVLNACSHTGYVNEARSYFYLMRNEYGIEHTV 447

Query: 596 ASWNAMINGYMKSGYYKLARDLFDVMGAR 682
             +  +++   ++G+ + A+D+ + M  R
Sbjct: 448 EHYGCLVDVLCRTGHLEEAKDIVENMPMR 476


>gb|KJB10244.1| hypothetical protein B456_001G192200, partial [Gossypium raimondii]
          Length = 453

 Score =  251 bits (642), Expect = 3e-64
 Identities = 128/230 (55%), Positives = 166/230 (72%)
 Frame = +2

Query: 86  TLFSYNTIIKRFLQNHLSQDALMVFVKLLCCPGLLPDEFTLPCAIKACANLGAVREGKMI 265
           +L  +N I+K ++QN  S +A+ +FV LL      PDEFT PC IKACA L A++EGK I
Sbjct: 80  SLVLWNIILKCYIQNQQSHEAISLFVLLL--GHFPPDEFTFPCVIKACAKLTALKEGKQI 137

Query: 266 HGLALKLGFGSGSGVHVESSLVRLYSKCGDINSARKLFDKMIVKDLVSWNVLLDGYVKCG 445
           HGL L LGFG      V++SLV LYSKCG I SA  +FD+M  KDLVSWN LLDGY +CG
Sbjct: 138 HGLVLNLGFGLDK--FVQASLVNLYSKCGKIGSAYAVFDQMDEKDLVSWNSLLDGYARCG 195

Query: 446 GENIEVVLRLFDEMPEKDVFTWTVLIDGLAKSGRVEEAREVFDSMLDKNVASWNAMINGY 625
              ++  +++FDEMPEKD F+WTVLI GLAK G VE AR++F++M ++N+ SWN MINGY
Sbjct: 196 --EVKAAMKVFDEMPEKDCFSWTVLIYGLAKCGEVETARKIFENMPNRNLVSWNTMINGY 253

Query: 626 MKSGYYKLARDLFDVMGARNIITWNSMISGYELNGKFLEALRLYPMMLDE 775
           +K+G    A  LFD M  RN+ITWNS+I G++LN +FLEAL ++  ML+E
Sbjct: 254 IKAGDTNSACKLFDQMPTRNLITWNSIIGGFKLNLRFLEALEMFERMLEE 303



 Score = 78.6 bits (192), Expect = 4e-12
 Identities = 48/178 (26%), Positives = 83/178 (46%), Gaps = 39/178 (21%)
 Frame = +2

Query: 341 SKCGDINSARKLFDKMIVKDLVSWNVLLDGYVKCGGENIEVVLRLFDEMPEKDVFTWTVL 520
           +KCG++ +ARK+F+ M  ++LVSWN +++GY+K G  N     +LFD+MP +++ TW  +
Sbjct: 223 AKCGEVETARKIFENMPNRNLVSWNTMINGYIKAGDTNS--ACKLFDQMPTRNLITWNSI 280

Query: 521 IDGLAKSGRVEEAREVFDSMLDKNVASWNA------------------------------ 610
           I G   + R  EA E+F+ ML++     +A                              
Sbjct: 281 IGGFKLNLRFLEALEMFERMLEEEFRPTHATLVSVISAVSGLASLGTGRLIHSYIVKNGI 340

Query: 611 ---------MINGYMKSGYYKLARDLFDVMGARNIITWNSMISGYELNGKFLEALRLY 757
                    +I  Y K G    A  +F  +  + +  W ++I G  ++G    AL+L+
Sbjct: 341 ELDGVVGTVLIEMYSKCGGIDSAVTVFRTISHKKLGHWTAIIVGLSIHGMADHALKLF 398



 Score = 70.1 bits (170), Expect = 1e-09
 Identities = 51/183 (27%), Positives = 94/183 (51%), Gaps = 10/183 (5%)
 Frame = +2

Query: 248 REGKMIHGLALKLGFGSGSGVHVESSLVRLYS--KCGDINSARKLFDKMIVKDLVSWNVL 421
           +E + +H  +LK G  S   +   S L+ LY+     ++  AR +FD++    LV WN++
Sbjct: 30  QETQQLHAFSLKTGVFSHPSL--SSRLLSLYADPNINNLRYARSVFDRIQHPSLVLWNII 87

Query: 422 LDGYV--KCGGENIEVVLRLFDEMPEKDVFTWTVLIDGLAKSGRVEEAREVFDSM----- 580
           L  Y+  +   E I + + L    P  D FT+  +I   AK   ++E +++   +     
Sbjct: 88  LKCYIQNQQSHEAISLFVLLLGHFP-PDEFTFPCVIKACAKLTALKEGKQIHGLVLNLGF 146

Query: 581 -LDKNVASWNAMINGYMKSGYYKLARDLFDVMGARNIITWNSMISGYELNGKFLEALRLY 757
            LDK V +  +++N Y K G    A  +FD M  +++++WNS++ GY   G+   A++++
Sbjct: 147 GLDKFVQA--SLVNLYSKCGKIGSAYAVFDQMDEKDLVSWNSLLDGYARCGEVKAAMKVF 204

Query: 758 PMM 766
             M
Sbjct: 205 DEM 207


>ref|XP_007049307.1| Pentatricopeptide repeat superfamily protein, putative [Theobroma
           cacao] gi|508701568|gb|EOX93464.1| Pentatricopeptide
           repeat superfamily protein, putative [Theobroma cacao]
          Length = 682

 Score =  251 bits (641), Expect = 3e-64
 Identities = 131/239 (54%), Positives = 165/239 (69%)
 Frame = +2

Query: 59  NNIEIPVKKTLFSYNTIIKRFLQNHLSQDALMVFVKLLCCPGLLPDEFTLPCAIKACANL 238
           + I++P   TL  +N IIK +++N  S +A+ +F +LL      PDEFT PC IK CA L
Sbjct: 74  DQIQLP---TLILWNIIIKCYVENQQSHEAIFLFAQLL--HHFPPDEFTFPCVIKGCAKL 128

Query: 239 GAVREGKMIHGLALKLGFGSGSGVHVESSLVRLYSKCGDINSARKLFDKMIVKDLVSWNV 418
            AV EGK IHGL LKLGFG       + SLV LYSKCG+I SA K+FD M  KDLV WN 
Sbjct: 129 NAVNEGKQIHGLVLKLGFGLDK--FTQGSLVNLYSKCGEIASAHKVFDVMGEKDLVLWNS 186

Query: 419 LLDGYVKCGGENIEVVLRLFDEMPEKDVFTWTVLIDGLAKSGRVEEAREVFDSMLDKNVA 598
           LLDGY +CG   ++V ++ F+EMPE+D F+WTVLIDGLAK G VE ARE+F+ M ++N+ 
Sbjct: 187 LLDGYARCG--EVKVAMKAFEEMPERDCFSWTVLIDGLAKCGEVETAREIFEKMPNRNLV 244

Query: 599 SWNAMINGYMKSGYYKLARDLFDVMGARNIITWNSMISGYELNGKFLEALRLYPMMLDE 775
           SWN MINGYMK+G    A  LF+ M  RN+ITWNS+I G ELN  F+EAL ++  ML E
Sbjct: 245 SWNTMINGYMKAGDINSACKLFNRMPKRNLITWNSIIGGLELNLHFVEALEMFKRMLKE 303



 Score = 78.2 bits (191), Expect = 5e-12
 Identities = 54/181 (29%), Positives = 93/181 (51%), Gaps = 9/181 (4%)
 Frame = +2

Query: 251 EGKMIHGLALKLGFGSGSGVHVESSLVRLYSKCGDINS---ARKLFDKMIVKDLVSWNVL 421
           E + +H  +LK G  S   +   S L+ LY+   DIN+   AR +FD++ +  L+ WN++
Sbjct: 31  ETQQLHAFSLKTGLFSHPSI--SSRLLSLYAD-PDINNLRYARSVFDQIQLPTLILWNII 87

Query: 422 LDGYV--KCGGENIEVVLRLFDEMPEKDVFTWTVLIDGLAKSGRVEEAREVFDSMLDKNV 595
           +  YV  +   E I +  +L    P  D FT+  +I G AK   V E +++   +L    
Sbjct: 88  IKCYVENQQSHEAIFLFAQLLHHFP-PDEFTFPCVIKGCAKLNAVNEGKQIHGLVLKLGF 146

Query: 596 A----SWNAMINGYMKSGYYKLARDLFDVMGARNIITWNSMISGYELNGKFLEALRLYPM 763
                +  +++N Y K G    A  +FDVMG ++++ WNS++ GY   G+   A++ +  
Sbjct: 147 GLDKFTQGSLVNLYSKCGEIASAHKVFDVMGEKDLVLWNSLLDGYARCGEVKVAMKAFEE 206

Query: 764 M 766
           M
Sbjct: 207 M 207



 Score = 67.8 bits (164), Expect = 7e-09
 Identities = 57/227 (25%), Positives = 112/227 (49%), Gaps = 10/227 (4%)
 Frame = +2

Query: 80  KKTLFSYNTIIKRFLQNHLSQDALMVFVKLLCCPGLLPDEFTLPCAIKACANLGAVREGK 259
           K+ L ++N+II     N    +AL +F ++L      P   TL   I A + L ++ +G+
Sbjct: 271 KRNLITWNSIIGGLELNLHFVEALEMFKRMLK-EEFRPSHATLVSVISAVSGLASLGKGR 329

Query: 260 MIHGLALKLGFGSGSGVHVESSLVRLYSKCGDINSARKLFDKMIVKDLVSWNVLLDGYVK 439
            +H   +K G     GV V + L+ +YSKCG I+SA  +F  +  K L  W  ++ G   
Sbjct: 330 SMHSYIVKNGIEL-DGV-VGTVLIEMYSKCGSIDSALTIFRTISNKKLGHWTAIIVGLSI 387

Query: 440 CGGENIEVVLRLFDEM----PEKDVFTWTVLIDGLAKSGRVEEAREVFDSMLDK-----N 592
            G    E  L  F EM     + +  T+  +++  + +G + + R  F++M+++      
Sbjct: 388 HG--MAEHALEFFLEMCRIGVKPNAITFVGVLNACSHAGLINDGRGYFNTMINEYGIKPT 445

Query: 593 VASWNAMINGYMKSGYYKLARDLFDVMGAR-NIITWNSMISGYELNG 730
           +  +  +++   ++G  + A+++ + M  R N + W +++SG   +G
Sbjct: 446 IEHYGCLVDMLCRAGDLEEAKNIIEEMPRRANKVIWMTLLSGARNHG 492


>ref|XP_009102373.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Brassica rapa]
          Length = 682

 Score =  249 bits (635), Expect = 2e-63
 Identities = 119/226 (52%), Positives = 169/226 (74%)
 Frame = +2

Query: 98  YNTIIKRFLQNHLSQDALMVFVKLLCCPGLLPDEFTLPCAIKACANLGAVREGKMIHGLA 277
           +N ++K +++NH S +A+ +F  LL      PD FTLPC +K C+ L AV EGK IHG++
Sbjct: 86  WNMMLKCYVENHRSHEAICLFSHLLS--EFSPDNFTLPCVLKGCSRLCAVEEGKQIHGVS 143

Query: 278 LKLGFGSGSGVHVESSLVRLYSKCGDINSARKLFDKMIVKDLVSWNVLLDGYVKCGGENI 457
           +KLG        V+SSLV LYSKCG ++ ARK+FDKM  +DLV+WN L+DGY + G  ++
Sbjct: 144 VKLGLTLDK--FVQSSLVSLYSKCGMLDCARKVFDKMGERDLVTWNSLIDGYARSG--HV 199

Query: 458 EVVLRLFDEMPEKDVFTWTVLIDGLAKSGRVEEAREVFDSMLDKNVASWNAMINGYMKSG 637
           E+ ++LFDE+P++D ++WT L+ G +KSG+VE AR+VFD M  KN+ SWNAMINGYM+SG
Sbjct: 200 EIAMKLFDEIPDRDSYSWTALLHGFSKSGKVEAARDVFDKMPAKNLVSWNAMINGYMRSG 259

Query: 638 YYKLARDLFDVMGARNIITWNSMISGYELNGKFLEALRLYPMMLDE 775
            ++ ARDLF +M  RN+ITWN++I+GYE+NG+F EAL ++  ML+E
Sbjct: 260 DFESARDLFKIMPERNLITWNTVIAGYEVNGRFQEALSMFVRMLEE 305



 Score = 79.7 bits (195), Expect = 2e-12
 Identities = 64/243 (26%), Positives = 108/243 (44%), Gaps = 69/243 (28%)
 Frame = +2

Query: 245 VREGKMIHGLALKLGFGSGSGVHVESSLVRLYSK--CGDINSARKLFDKMIVKDLVSWNV 418
           + E K +H L+LK G  S     V S L+ LY+     D+  AR +FD++    L  WN+
Sbjct: 31  IEEAKKLHCLSLKTG--SFDHPPVSSRLLSLYTARPINDLIYARSVFDRIQSPSLPLWNM 88

Query: 419 LLDGYVKCGGENIEVVL---RLFDEMPEK------------------------------- 496
           +L  YV+    +  + L    L +  P+                                
Sbjct: 89  MLKCYVENHRSHEAICLFSHLLSEFSPDNFTLPCVLKGCSRLCAVEEGKQIHGVSVKLGL 148

Query: 497 --DVFTWTVLIDGLAKSGRVEEAREVFDSMLDKNVASWNAMINGYMKSGYYKL------- 649
             D F  + L+   +K G ++ AR+VFD M ++++ +WN++I+GY +SG+ ++       
Sbjct: 149 TLDKFVQSSLVSLYSKCGMLDCARKVFDKMGERDLVTWNSLIDGYARSGHVEIAMKLFDE 208

Query: 650 ------------------------ARDLFDVMGARNIITWNSMISGYELNGKFLEALRLY 757
                                   ARD+FD M A+N+++WN+MI+GY  +G F  A  L+
Sbjct: 209 IPDRDSYSWTALLHGFSKSGKVEAARDVFDKMPAKNLVSWNAMINGYMRSGDFESARDLF 268

Query: 758 PMM 766
            +M
Sbjct: 269 KIM 271



 Score = 74.7 bits (182), Expect = 6e-11
 Identities = 63/227 (27%), Positives = 110/227 (48%), Gaps = 11/227 (4%)
 Frame = +2

Query: 68  EIPVKKTLFSYNTIIKRFLQNHLSQDALMVFVKLLCCPG-LLPDEFTLPCAIKACANLGA 244
           +I  ++ L ++NT+I  +  N   Q+AL +FV++L     L P+  T    I A A    
Sbjct: 269 KIMPERNLITWNTVIAGYEVNGRFQEALSMFVRMLEEEDDLKPNNATYTSLISAVAASAI 328

Query: 245 VREGKMIHGLALKLGFGSGSGVHVESSLVRLYSKCGDINSARKLFDKMIVKDLVSWNVLL 424
           +   K +H   +K G GS  GV + + L+ +YSKCG + SA   F  +  + L  WN ++
Sbjct: 329 LSTAKWVHSYMVKNGIGS-DGV-MGTLLIEMYSKCGCLESALTTFRSIHRQKLGHWNSVI 386

Query: 425 DGYVKCGGENIEVVLRLFDEMPEKDV----FTWTVLIDGLAKSGRVEEAREVFDSM---- 580
            G    G    +  L LF +M E  +     T+  L++  +  G V+EAR  FD M    
Sbjct: 387 VGLGLHG--MADEALDLFKQMQESGIKPNAVTFVGLLNACSHVGYVDEARFYFDLMVKEY 444

Query: 581 -LDKNVASWNAMINGYMKSGYYKLARDLFDVMGAR-NIITWNSMISG 715
            ++  +  +  +++   ++G  + A+ +   M  R N + W S++ G
Sbjct: 445 KVEHKIEHYGCLVDALCRTGNLQDAKTIIQKMPMRPNKVIWMSLLRG 491


>gb|KDO58423.1| hypothetical protein CISIN_1g036237mg [Citrus sinensis]
          Length = 689

 Score =  248 bits (634), Expect = 2e-63
 Identities = 139/279 (49%), Positives = 178/279 (63%), Gaps = 24/279 (8%)
 Frame = +2

Query: 5   KEVTQLHAQHIFTSTILSNNIE------------------------IPVKKTLFSYNTII 112
           KE  QLHA  + T+ I  + I                         I    +L  YN +I
Sbjct: 35  KETQQLHALSVKTNLIYHSGISSRLLSLYVDPHINNLHYARSIFDRILQHPSLVLYNLLI 94

Query: 113 KRFLQNHLSQDALMVFVKLLCCPGLLPDEFTLPCAIKACANLGAVREGKMIHGLALKLGF 292
           K ++ N  S +AL +F  LL    LLPD FTLPC IK  A LGA++EGK IHGL  KLGF
Sbjct: 95  KCYVFNQRSHEALTLFCDLLD-RFLLPDNFTLPCVIKGAARLGAIKEGKQIHGLVFKLGF 153

Query: 293 GSGSGVHVESSLVRLYSKCGDINSARKLFDKMIVKDLVSWNVLLDGYVKCGGENIEVVLR 472
           G      V SSLV +Y+K G+I+  R++FD M  KDLVSWN L+DGYVK G   +EV ++
Sbjct: 154 GFDK--FVLSSLVSMYAKFGEIDLGRRVFDAMDDKDLVSWNCLIDGYVKKG--EVEVAMK 209

Query: 473 LFDEMPEKDVFTWTVLIDGLAKSGRVEEAREVFDSMLDKNVASWNAMINGYMKSGYYKLA 652
           LFDEMP++D+F+WT L+DG +K G+VE ARE+F  M ++N+ SWNAMINGYMK+G    A
Sbjct: 210 LFDEMPDRDLFSWTCLVDGFSKCGKVEIAREIFYRMPNRNLVSWNAMINGYMKAGDVDSA 269

Query: 653 RDLFDVMGARNIITWNSMISGYELNGKFLEALRLYPMML 769
            +LFD M  R++ITWNSMI+GYELNG+F+EAL L   ML
Sbjct: 270 CELFDDMEIRDLITWNSMIAGYELNGRFMEALELLETML 308



 Score = 73.2 bits (178), Expect = 2e-10
 Identities = 57/226 (25%), Positives = 112/226 (49%), Gaps = 10/226 (4%)
 Frame = +2

Query: 83  KTLFSYNTIIKRFLQNHLSQDALMVFVKLLCCPGLLPDEFTLPCAIKACANLGAVREGKM 262
           + L ++N++I  +  N    +AL +   +L    +LP++ TL  A+ A A L  + +G+ 
Sbjct: 279 RDLITWNSMIAGYELNGRFMEALELLETMLI-GDVLPNDATLVSALSAVAGLAVLNKGRW 337

Query: 263 IHGLALKLGFGSGSGVHVESSLVRLYSKCGDINSARKLFDKMIVKDLVSWNVLLDGYVKC 442
           +H   +K GF    GV + + L+++YSKCG I SA  +F  +  K +  W  ++ G    
Sbjct: 338 MHSYIVKNGFVV-DGV-LGTLLIQMYSKCGSIESALTVFRAISKKKVGHWTAMIVGLGMH 395

Query: 443 GGENIEVVLRLFDEM----PEKDVFTWTVLIDGLAKSGRVEEAREVFDSM-----LDKNV 595
           G       L LF++M     +    T+  +++  + +G V + R  F+ M     ++  +
Sbjct: 396 G--MATQALDLFNKMCRMGMKPTAITFIGVLNACSHAGLVNDGRRYFNMMINDYGIEPTI 453

Query: 596 ASWNAMINGYMKSGYYKLARDLFDVMGAR-NIITWNSMISGYELNG 730
             +  +++   ++GY + A+   + M  R N + W S++SG   +G
Sbjct: 454 EHYGCLVDILCRTGYLEEAKSTIESMPMRPNFVIWMSLLSGARNHG 499



 Score = 71.6 bits (174), Expect = 5e-10
 Identities = 53/186 (28%), Positives = 96/186 (51%), Gaps = 11/186 (5%)
 Frame = +2

Query: 248 REGKMIHGLALKLGFGSGSGVHVESSLVRLY--SKCGDINSARKLFDKMIVK-DLVSWNV 418
           +E + +H L++K      SG+   S L+ LY      +++ AR +FD+++    LV +N+
Sbjct: 35  KETQQLHALSVKTNLIYHSGI--SSRLLSLYVDPHINNLHYARSIFDRILQHPSLVLYNL 92

Query: 419 LLDGYV--KCGGENIEVVLRLFDEMPEKDVFTWTVLIDGLAKSGRVEEAREVFDSML--- 583
           L+  YV  +   E + +   L D     D FT   +I G A+ G ++E +++   +    
Sbjct: 93  LIKCYVFNQRSHEALTLFCDLLDRFLLPDNFTLPCVIKGAARLGAIKEGKQIHGLVFKLG 152

Query: 584 ---DKNVASWNAMINGYMKSGYYKLARDLFDVMGARNIITWNSMISGYELNGKFLEALRL 754
              DK V S  ++++ Y K G   L R +FD M  +++++WN +I GY   G+   A++L
Sbjct: 153 FGFDKFVLS--SLVSMYAKFGEIDLGRRVFDAMDDKDLVSWNCLIDGYVKKGEVEVAMKL 210

Query: 755 YPMMLD 772
           +  M D
Sbjct: 211 FDEMPD 216