BLASTX nr result
ID: Forsythia21_contig00021535
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Forsythia21_contig00021535
(6757 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN71427.1| hypothetical protein VITISV_027864 [Vitis vinifera] 1674 0.0
emb|CAN75363.1| hypothetical protein VITISV_026292 [Vitis vinifera] 909 0.0
gb|AIC77183.1| polyprotein [Gossypium barbadense] 793 0.0
emb|CAN61340.1| hypothetical protein VITISV_007301 [Vitis vinifera] 781 0.0
gb|AAD50001.1|AC007259_14 Hypothetical protein [Arabidopsis thal... 775 0.0
emb|CAB71063.1| copia-type polyprotein [Arabidopsis thaliana] 772 0.0
gb|AAT38758.1| Putative gag-pol polyprotein, identical [Solanum ... 771 0.0
gb|AAG60117.1|AC073555_1 copia-type polyprotein, putative [Arabi... 771 0.0
emb|CAB75932.1| putative protein [Arabidopsis thaliana] 762 0.0
dbj|BAB01972.1| copia-like retrotransposable element [Arabidopsi... 745 0.0
emb|CAN60238.1| hypothetical protein VITISV_032906 [Vitis vinifera] 740 0.0
gb|AAP46257.1| putative polyprotein [Oryza sativa Japonica Group... 739 0.0
dbj|BAB11200.1| copia-type polyprotein [Arabidopsis thaliana] gi... 737 0.0
gb|AAG51247.1|AC055769_6 copia-type polyprotein, putative; 28768... 737 0.0
gb|AAD21687.1| Strong similarity to gi|3600044 T12H20.12 proteas... 731 0.0
gb|AAG10812.1|AC018460_6 Putative retroelement polyprotein [Arab... 727 0.0
emb|CAN60366.1| hypothetical protein VITISV_031870 [Vitis vinifera] 722 0.0
ref|XP_008337255.1| PREDICTED: retrovirus-related Pol polyprotei... 720 0.0
gb|ABW74566.1| integrase [Boechera divaricarpa] 720 0.0
emb|CAN61322.1| hypothetical protein VITISV_012106 [Vitis vinifera] 719 0.0
>emb|CAN71427.1| hypothetical protein VITISV_027864 [Vitis vinifera]
Length = 1300
Score = 1674 bits (4336), Expect = 0.0
Identities = 855/1379 (62%), Positives = 1006/1379 (72%), Gaps = 6/1379 (0%)
Frame = +2
Query: 1064 MGDL*VISGVKKLNNQNYTTWQTCMESYLQGQDLWDVVGGSKVTPP--EDA-GALKKWKI 1234
MGDL VI G+KKLNNQNY TW TCM SY+QGQDLW+VV GS++T P EDA G L+KWKI
Sbjct: 1 MGDLQVIGGIKKLNNQNYNTWSTCMMSYMQGQDLWEVVNGSEITQPKVEDANGILRKWKI 60
Query: 1235 KAGKTMFAIKTTIDEELLEYIRDKNTPKEAWDTFAALFSKKNDLRLQFLENELLSITQGE 1414
KAGK MFA+KTTI+E++LE+IRD TP EAW+TF LFSKKND RLQ LE+EL S+ Q +
Sbjct: 61 KAGKAMFALKTTIEEDVLEHIRDAKTPYEAWNTFTKLFSKKNDTRLQLLESELFSVAQRD 120
Query: 1415 MTINQYFNKVKSLCRXXXXXXXXXXXXXXRMRRIIIHGLRPEFRSFIAAIQGWPEQPSLI 1594
+TI QYF+KVK+LCR M+RIIIHGLRPEFR F+AAIQGW QPSL+
Sbjct: 121 LTIAQYFHKVKTLCREISELDLEAPIGETXMKRIIIHGLRPEFRGFVAAIQGWQNQPSLV 180
Query: 1595 NLENLLADQEALTKQMLGVSLKKEEEALFSYKKKGRFPRQNNXXXXXXXFIEGSQTRGAQ 1774
ENLLA QEAL KQM GVSLK EEEAL+++K G Q+ + ++G +
Sbjct: 181 EFENLLAGQEALAKQMGGVSLKGEEEALYAHKG-GWNSXQHTVRRTKKNEDKAKCSQGER 239
Query: 1775 ENRDERGQLSN--RYRRPNGSCFVCGKRGHYARDCRFRKKQAEGNMATSNEQEKYNSEEE 1948
R E G N ++ G C+ C K+GH A+DC +K E N TS SE+E
Sbjct: 240 SARVE-GDSKNPGTXKKFEGKCYNCXKKGHMAKDCWSKKGLVESNATTSK------SEDE 292
Query: 1949 WDAEASIAVIEQTHEEVCSSSLEEKSALMAVVPGRIDYENDWIVDSGCSNHMTGDKEKLQ 2128
WDA+A A I + SA +A +IDYE DWI+DSGCSNHMTGDKEKLQ
Sbjct: 293 WDAQAFFAAIGE-------------SAFIATTSEQIDYEKDWIIDSGCSNHMTGDKEKLQ 339
Query: 2129 NTAEYKGGRMVVTANNSRLPITHIGKTVITPRFSPSQVHLQDVYHVPGMKKNLLSVAQLT 2308
+ +EYKG MVVTANNS+LPI HIG TV++ +++ + V LQ+VYHVPGMKKNLLSVAQLT
Sbjct: 340 DLSEYKGRHMVVTANNSKLPIAHIGNTVVSSQYNTNDVSLQNVYHVPGMKKNLLSVAQLT 399
Query: 2309 SSGNYVLFGPKDVKVYQNVKISGTPVMEGRRLESIYVMSAESAYVDKTRKNETTDLWHAR 2488
SSG+ VLFGP+DVKVY ++++ PV++GRRLES+YVMSAE+AYVDKTRKNET DLWH R
Sbjct: 400 SSGHSVLFGPQDVKVYHDLEVMEEPVIKGRRLESVYVMSAETAYVDKTRKNETADLWHMR 459
Query: 2489 LGHVSYHXXXXXXXXXXXXXXPQLEIRDDMVCAGCQYGKAHQLPYQESNYRAKQPLELIH 2668
L H+SY PQLE+R +CA CQYGKAHQLPY+ES ++AK PLELIH
Sbjct: 460 LSHISYSKLTMMMKKSMLKGLPQLEVRKXTICAXCQYGKAHQLPYEESKWKAKGPLELIH 519
Query: 2669 SDLFGPVKQPSIRGMCYMVTFIDDFSRYVWVXXXXXXXXXXXXXXXXXXXXXXXXXXXIK 2848
SD+FGPVKQ S+ GM YMVTFIDDFSR V++
Sbjct: 520 SDVFGPVKQASLSGMKYMVTFIDDFSRRVYLQMSF------------------------- 554
Query: 2849 CLRTDNGGEYTSGEFSQYLQEHKIHHQLTCPNTPQQNGVAERKNRHLVETCRSMLHAKNV 3028
+TS E +Y TC NTPQQNGV ERKNRHL E CRSMLHAKNV
Sbjct: 555 ---------FTSSENXEYAIS------FTCANTPQQNGVXERKNRHLAEICRSMLHAKNV 599
Query: 3029 PGRF*AECMRTAAHVINRLPQPKLGFVSPFEKLWKIKPTVSHFRVFGCVCYVFVPSHLRS 3208
PG F AE M+TAA VINRLPQ +L F SPFEKLW IKPTVS+FRVFGCVCYVFVP+HLRS
Sbjct: 600 PGXFWAEXMKTAAFVINRLPQQRLNFSSPFEKLWNIKPTVSYFRVFGCVCYVFVPNHLRS 659
Query: 3209 KFDKKAIRCIFVGYDSQRKGWRCCDPTNDLCYTSRNVVFDETSS*WTPQRVELPDSKKIG 3388
K DKKA+RC+ VGYDSQRK WRCCDPT CYTSRNVVFDE+SS W+ ++ L DS
Sbjct: 660 KMDKKAVRCVLVGYDSQRKXWRCCDPTTGKCYTSRNVVFDESSSWWSSEKEILXDSBVFK 719
Query: 3389 DKLQEEIVEVQKSHEEIENSQESSDEEEPMRTTQGPWQTGVHQPTPEENRPIQQEEVEVP 3568
D+LQ +Q S E EN+ + ++ TQ PWQTGVH EE
Sbjct: 720 DELQS--ARIQLSLGEAENAXDGDIGDDX---TQSPWQTGVHGQPSEE------------ 762
Query: 3569 TSPQPQLRKSTRQRKPNPKYANAVVEEDESTKEPVTFEEAVQHKEWRKAMEEEIVALKQN 3748
R +KPNPKYAN + ED + KEP TF EA Q+ +W KAM EEI ALK+N
Sbjct: 763 -----------RTKKPNPKYANVAIVEDANAKEPXTFAEAFQNSDWSKAMXEEIAALKRN 811
Query: 3749 ETWDLMPIPDGAKPISCKWVYKVKRRLDGSIERYKSRLVARGFSQQYGLDYDETFSPVAK 3928
+TW+L+P P +P SCKWVYK+KRR DGSIER+K+ LVARGFSQQYGLDYDETFSPV K
Sbjct: 812 QTWELVPKPRDVEPXSCKWVYKIKRRTDGSIERHKAXLVARGFSQQYGLDYDETFSPVXK 871
Query: 3929 ITTVRMLIALATSKSWKLWQMDVKKAFLHGELDRDIYMEQPKGFENKENPGHVCKLKKAL 4108
+TTVR+L+ALA +K W LWQMDVK AFLHGELDR+IYM QP GF+++ +P +VCKL+KAL
Sbjct: 872 LTTVRVLLALAANKDWDLWQMDVKNAFLHGELDREIYMNQPMGFQSQGHPEYVCKLRKAL 931
Query: 4109 YGLKQAPRAWYGKIAEFLVQCGYSVAPADSSLFVKTQHGKLAIVLVYVDDLIVTGDDENE 4288
YGLKQAPRAWYGKIAEFL Q GYSV PADSSLFVK GKLAIVLVYVDDLI+TGDD E
Sbjct: 932 YGLKQAPRAWYGKIAEFLTQSGYSVTPADSSLFVKANGGKLAIVLVYVDDLIITGDDVEE 991
Query: 4289 IQRTRTNLSVRFQMKELGELNHFLGLEMDRTKEGIFLCQQKYARDLLHKFGMIDCKPIST 4468
I RT+ NLSVRF+MKELG+L HFLGLE+DRT EGIFLCQQKYA+DLL KFGM++CKPIST
Sbjct: 992 IFRTKENLSVRFEMKELGQLKHFLGLEVDRTNEGIFLCQQKYAKDLLKKFGMLECKPIST 1051
Query: 4469 PIEINSKLCD-EGKDLENATMYRQLVGSLIYLTLTRPDIAYAVGIASRFMEKPKKPHLEV 4645
P+E N+K+C+ EGKDL++ATMYRQLVGSL+YLTLT PDI+YAVG+ SR+M+ PKKPHLE
Sbjct: 1052 PMEPNAKMCEHEGKDLKDATMYRQLVGSLLYLTLTXPDISYAVGVMSRYMQNPKKPHLEA 1111
Query: 4646 VRQILRYVKGTIDYGLFYKKNKDCKVVGYCDADYAGCRDTRRSTTGYVFSLGSAAVSWCS 4825
VR+ILR+VKGTIDYGL YKK +DCK+VGYCDADYAG DTR STTGYVF LGS A+SWCS
Sbjct: 1112 VRRILRHVKGTIDYGLLYKKXEDCKLVGYCDADYAGDHDTRXSTTGYVFMLGSGAISWCS 1171
Query: 4826 KRQPTVSLSTXXXXXXXXXXXXXXSTWLMQLMADLYQPVSYATQLYCDNQSAIRIAENPV 5005
KRQPTVSLST S WL++LM DL+Q V YA LYCDNQSA+R+AENPV
Sbjct: 1172 KRQPTVSLSTTEAEYRAAAMATQESMWLIRLMNDLHQLVDYAVPLYCDNQSAVRLAENPV 1231
Query: 5006 CHARTKHVEVHYHFVREKVLKGEIDLKHINTEEQVADVLTKGLSASKFEGFRTQLGIMR 5182
HARTKHVEVHYHF+REKVLK E++L I +E+QVAD+ TKGLS SKFE F QLG+++
Sbjct: 1232 FHARTKHVEVHYHFIREKVLKEEVELNQIKSEDQVADLFTKGLSGSKFESFCHQLGMVK 1290
>emb|CAN75363.1| hypothetical protein VITISV_026292 [Vitis vinifera]
Length = 1161
Score = 909 bits (2350), Expect = 0.0
Identities = 469/771 (60%), Positives = 543/771 (70%), Gaps = 1/771 (0%)
Frame = +2
Query: 2690 KQPSIRGMCYMVTFIDDFSRYVWVXXXXXXXXXXXXXXXXXXXXXXXXXXXIKCLRTDNG 2869
KQ S+ GM YMVTFI+DFS YVWV I+CLRTDNG
Sbjct: 461 KQASLSGMKYMVTFINDFSNYVWVYFMKEKSETFSKYKEFKEMTEVKVDKRIRCLRTDNG 520
Query: 2870 GEYTSGEFSQYLQEHKIHHQLTCPNTPQQNGVAERKNRHLVETCRSMLHAKNVPGRF*AE 3049
GEYTS EF +L+E ++ HQ TC NTPQQN VAERKNRHL E CRSMLHAKNVP RF AE
Sbjct: 521 GEYTSDEFFYFLRECRVRHQFTCANTPQQNSVAERKNRHLAEICRSMLHAKNVPRRFWAE 580
Query: 3050 CMRTAAHVINRLPQPKLGFVSPFEKLWKIKPTVSHFRVFGCVCYVFVPSHLRSKFDKKAI 3229
M+T A VINRLPQ KL F SPFEKLW IKPT+S+FRVFGCVCYVFVP+HLRSK DKK I
Sbjct: 581 AMKTVAFVINRLPQQKLNFSSPFEKLWNIKPTISYFRVFGCVCYVFVPNHLRSKMDKKEI 640
Query: 3230 RCIFVGYDSQRKGWRCCDPTNDLCYTSRNVVFDETSS*WTPQRVELPDSKKIGDKLQEEI 3409
LPDS D+LQ
Sbjct: 641 ---------------------------------------------LPDSDVFKDELQSAR 655
Query: 3410 VEVQKSHEEIENSQESSDEEEPMRTTQGPWQTGVHQPTPEENRPIQQEEVEVPTSPQPQL 3589
+++ E + + D+E TQ PWQTGVH EE P + E +P P L
Sbjct: 656 IQLSLGEXENAANGDIXDDE-----TQSPWQTGVHGQXSEEGEPSETE------APIP-L 703
Query: 3590 RKSTRQRKPNPKYANAVVEEDESTKEPVTFEEAVQHKEWRKAMEEEIVALKQNETWDLMP 3769
R+S R +KPNPKYAN + ED + KEP TF EA Q+ +W KAM+EEI ALK+N+TW+L+P
Sbjct: 704 RRSARTKKPNPKYANVAIVEDANAKEPETFAEAFQNPDWSKAMKEEIAALKRNQTWELVP 763
Query: 3770 IPDGAKPISCKWVYKVKRRLDGSIERYKSRLVARGFSQQYGLDYDETFSPVAKITTVRML 3949
+PISCKWVYK+KRR DG IER+K+RLVARGFSQQYGLDYDETFSPVAK+TTVR+L
Sbjct: 764 KXRDVEPISCKWVYKIKRRTDGLIERHKARLVARGFSQQYGLDYDETFSPVAKLTTVRVL 823
Query: 3950 IALATSKSWKLWQMDVKKAFLHGELDRDIYMEQPKGFENKENPGHVCKLKKALYGLKQAP 4129
+ALA +K W L QMDVK AFLHGELDR+IYM QP GF+++ +P +VCKL+KALYGLKQAP
Sbjct: 824 LALAANKDWDLRQMDVKNAFLHGELDREIYMNQPMGFQSQGHPKYVCKLRKALYGLKQAP 883
Query: 4130 RAWYGKIAEFLVQCGYSVAPADSSLFVKTQHGKLAIVLVYVDDLIVTGDDENEIQRTRTN 4309
RAWYGKIAEFL Q GYS+ PADSSLFVK GKLAIVL Y N
Sbjct: 884 RAWYGKIAEFLTQSGYSITPADSSLFVKANGGKLAIVLAY------------------EN 925
Query: 4310 LSVRFQMKELGELNHFLGLEMDRTKEGIFLCQQKYARDLLHKFGMIDCKPISTPIEINSK 4489
LSVRF+MKELG+L HFLGLE+DRT EGIFLCQQKYA+DLL KFGM++CKPISTP+E N+K
Sbjct: 926 LSVRFEMKELGQLKHFLGLEVDRTHEGIFLCQQKYAKDLLKKFGMLECKPISTPMEPNAK 985
Query: 4490 LCD-EGKDLENATMYRQLVGSLIYLTLTRPDIAYAVGIASRFMEKPKKPHLEVVRQILRY 4666
+C+ EGKDL++ATMYRQLVGSL+YLT TR DI+YAVG+ SR+M+ PKKPHLE VR+ILR+
Sbjct: 986 MCEHEGKDLKDATMYRQLVGSLLYLTFTRTDISYAVGVMSRYMQNPKKPHLEAVRRILRH 1045
Query: 4667 VKGTIDYGLFYKKNKDCKVVGYCDADYAGCRDTRRSTTGYVFSLGSAAVSWCSKRQPTVS 4846
VKGTIDYGL YKK +D K+VGYCDADY G DTRRSTTGYVF LGS A+SWCSKRQPTVS
Sbjct: 1046 VKGTIDYGLLYKKGEDYKLVGYCDADYVGDHDTRRSTTGYVFMLGSRAISWCSKRQPTVS 1105
Query: 4847 LSTXXXXXXXXXXXXXXSTWLMQLMADLYQPVSYATQLYCDNQSAIRIAEN 4999
LST STWL++LM DL+Q V YA LYCDNQSA+R+AEN
Sbjct: 1106 LSTMEXEYRAAPMAAQESTWLIRLMNDLHQXVDYAXPLYCDNQSAVRLAEN 1156
Score = 488 bits (1257), Expect = e-134
Identities = 264/470 (56%), Positives = 323/470 (68%), Gaps = 5/470 (1%)
Frame = +2
Query: 1064 MGDL*VISGVKKLNNQNYTTWQTCMESYLQGQDLWDVVGGSKVTPPE--DA-GALKKWKI 1234
MGDL VI G+KKLNNQNY TW TCM SY+ GQDLW+VV GS++T E DA G L+KWKI
Sbjct: 1 MGDLKVIGGIKKLNNQNYNTWSTCMMSYMXGQDLWEVVNGSEITXXEXEDANGILRKWKI 60
Query: 1235 KAGKTMFAIKTTIDEELLEYIRDKNTPKEAWDTFAALFSKKNDLRLQFLENELLSITQGE 1414
KAGK MFA+KTTI+E++LE+IRD TP EAW+TF LFSKKND RLQ LE+ELLSI Q +
Sbjct: 61 KAGKXMFALKTTIEEDVLEHIRDAKTPYEAWNTFTKLFSKKNDTRLQLLESELLSIXQRD 120
Query: 1415 MTINQYFNKVKSLCRXXXXXXXXXXXXXXRMRRIIIHGLRPEFRSFIAAIQGWPEQPSLI 1594
TI YF+KVK+LCR RM+RIIIHGLRPEFR F+AAIQGW QPSL+
Sbjct: 121 XTIAXYFHKVKTLCREISELDLEAPIGETRMKRIIIHGLRPEFRGFVAAIQGWQNQPSLV 180
Query: 1595 NLENLLADQEALTKQMLGVSLKKEEEALFSYKKKGRFPRQNNXXXXXXXFIEGSQTRGAQ 1774
ENLLA QEAL KQM GVSLK EEEAL+++K + +Q+ + ++G +
Sbjct: 181 EFENLLAGQEALAKQMGGVSLKGEEEALYAHKXRWN-SKQHTVRRTKKNEDKAKSSQGER 239
Query: 1775 ENRDERGQLSNRYRRP--NGSCFVCGKRGHYARDCRFRKKQAEGNMATSNEQEKYNSEEE 1948
R E G N R G+C+ C K+GH A+DC +K E N ATS S +E
Sbjct: 240 SARVE-GDSKNPXTRKKFEGTCYNCRKKGHMAKDCWSKKGLVESNAATS------KSXDE 292
Query: 1949 WDAEASIAVIEQTHEEVCSSSLEEKSALMAVVPGRIDYENDWIVDSGCSNHMTGDKEKLQ 2128
WDA+A I + SA +A +IDYE DWI+DSGCSNHMTGDKEKL
Sbjct: 293 WDAQALFXAIGE-------------SAFIATTSEQIDYEKDWIIDSGCSNHMTGDKEKLX 339
Query: 2129 NTAEYKGGRMVVTANNSRLPITHIGKTVITPRFSPSQVHLQDVYHVPGMKKNLLSVAQLT 2308
+ EYKG MVVT NNS+LPI HIG TV++ +++ + V LQ+VYHV GMKKNLLS+AQLT
Sbjct: 340 DLXEYKGRHMVVTXNNSKLPIAHIGNTVVSSQYNTNDVSLQNVYHVXGMKKNLLSIAQLT 399
Query: 2309 SSGNYVLFGPKDVKVYQNVKISGTPVMEGRRLESIYVMSAESAYVDKTRK 2458
SSG VLFGP+DVKVY++++I V++GRRLES+YVMSAE+AY T K
Sbjct: 400 SSGXSVLFGPQDVKVYRDLEIMEELVIKGRRLESVYVMSAETAYDVSTAK 449
>gb|AIC77183.1| polyprotein [Gossypium barbadense]
Length = 1369
Score = 793 bits (2047), Expect = 0.0
Identities = 492/1426 (34%), Positives = 742/1426 (52%), Gaps = 55/1426 (3%)
Frame = +2
Query: 1064 MGDL*VISGVKKLNNQNYTTWQTCMESYLQGQDLWDVVGGSKVTPPEDAG---------- 1213
MGD+ + V +L NY W M++ L QD W++V + P + A
Sbjct: 1 MGDVIQLQ-VPQLTKTNYGNWSIRMKALLGSQDCWEIVEKGYIEPGDAATEAALSNDAKK 59
Query: 1214 ALKKWKIKAGKTMFAIKTTIDEELLEYIRDKNTPKEAWDTFAALFS---KKNDLRLQFL- 1381
AL++ + K K + +I +DE E I D K AW+ F K +RLQ L
Sbjct: 60 ALREARKKDQKALNSIFQGMDESTFEKISDVKNAKNAWEILQKSFQGVEKAKKVRLQSLR 119
Query: 1382 -ENELLSITQGEMTINQYFNKVKSLCRXXXXXXXXXXXXXXRMRRIIIHGLRPEFRSFIA 1558
E E+L + E I+ Y N+VKS+ R+ I+ L +F +
Sbjct: 120 AEFEMLKMKSSE-NIDDYANRVKSVVNEMKRNGETLDEV--RVMEKILRSLTRKFEYVVV 176
Query: 1559 AIQGWPEQPSLINLENLLADQEALTKQM-LGVSLKKEEEALFSYKK-----------KGR 1702
AI+ + S ++LE L+ +A ++M L + +AL S +GR
Sbjct: 177 AIEE-SKDLSKMSLEELVGSLQAHEQKMKLNEDSENLNQALHSKLSIDDGETSNNFSQGR 235
Query: 1703 FPRQNNXXXXXXXFIEGSQTRGA--------QENRDERGQLSNRYRRPNG---------- 1828
R+ G +RG QEN+D Q SNR R G
Sbjct: 236 GNRRGYRGGYRGGNRGGRGSRGRGNQSYGRYQENKDY--QTSNRGRGSRGRGRGRFQENK 293
Query: 1829 ---SCFVCGKRGHYARDCRFRKKQAEGNMATSNEQEKYNSEEEWDAEASIAVIEQTHEEV 1999
C+ C K GH++ +CR K E N +AV + +E+V
Sbjct: 294 SQVQCYNCNKYGHFSYECRSTHKVDERN--------------------HVAVAAEGNEKV 333
Query: 2000 CSSSLEEKSALMAVVPGRIDYENDWIVDSGCSNHMTGDKEKLQNTAEYKGGRMVVTANNS 2179
E S + + W +D+G SNHM G KE E G+ + +NS
Sbjct: 334 ------ESSVFLTYGENEDRKRSVWYLDNGASNHMCGRKELFTELDETVHGQ-ITFGDNS 386
Query: 2180 RLPITHIGKTVITPRFSPSQVHLQDVYHVPGMKKNLLSVAQLTSSGNYVLFGPKDVKVYQ 2359
I GK VIT R + + ++ DVY+VP +K NL+S+ QL G V + + +
Sbjct: 387 HAEIKGKGKVVITQR-NGEKKYISDVYYVPALKSNLISLGQLLEKGYEVHMKDRSLAIRN 445
Query: 2360 NVKISGTPV----MEGRRLESIYVMSAESAYVDKTRKNETTDLWHARLGHVSYHXXXXXX 2527
SG V M RL ++ + S E + KNE+ LWH R GH+ +
Sbjct: 446 K---SGELVVRVDMTRNRLFTLDIESGEVKCMKTDLKNESW-LWHLRYGHLGFSGLKLLS 501
Query: 2528 XXXXXXXXPQLEIRDDMVCAGCQYGKAHQLPYQES-NYRAKQPLELIHSDLFGPVKQPSI 2704
P + D +C C GK H+ ++ + RA++PLE++H+D+ GP S+
Sbjct: 502 KTNMVNGLPSIN-HPDQLCEACVKGKQHRQKFEVGKSRRARRPLEIVHTDISGPYDIESL 560
Query: 2705 RGMCYMVTFIDDFSRYVWVXXXXXXXXXXXXXXXXXXXXXXXXXXXIKCLRTDNGGEYTS 2884
G Y +TFIDD+SR WV +K LR+D GGEYT+
Sbjct: 561 GGNRYYLTFIDDYSRKCWVYFLKAKSEALEKFKEFKAMVEKQSGRYLKILRSDRGGEYTA 620
Query: 2885 GEFSQYLQEHKIHHQLTCPNTPQQNGVAERKNRHLVETCRSMLHAKNVPGRF*AECMRTA 3064
+ + ++H I HQLT TPQQNGVAERKNR +++ RSM+ K++P F AE + A
Sbjct: 621 KLYESFCKDHGIIHQLTARRTPQQNGVAERKNRTILDMARSMIKGKHLPRTFWAEAVECA 680
Query: 3065 AHVINRLPQPKLGFVSPFEKLWKIKPTVSHFRVFGCVCYVFVPSHLRSKFDKKAIRCIFV 3244
+++N+ P + +P E KP V H ++FGC+ Y VP R K D + +CIF+
Sbjct: 681 VYLLNQCPTKSVRHKTPEEAWSGHKPRVGHLKIFGCIAYAHVPEQQRKKLDDRGEKCIFI 740
Query: 3245 GYDSQRKGWRCCDPTNDLCYTSRNVVFDETSS*WTPQRVELPDSKKIGDKLQEEIVEVQK 3424
GYD + K +R +P SR+V FDE W +E+ VE
Sbjct: 741 GYDKRSKAYRLYNPLTKKLIISRDVEFDEADY-WRWSE-------------EEKKVEGLF 786
Query: 3425 SHEEIENSQESSDEEEPMRTTQGPWQTGVHQPTPEENRPIQQEEVEVPTSPQPQLRKSTR 3604
+E+ N +E D+ Q P T PT +E T + ST
Sbjct: 787 FNEDDNNQEEQGDD-------QSPGTTAPSSPTSSSGSS-SLDEAPTRTRSLNDIYNSTE 838
Query: 3605 QRKPNPKYANAVVEEDESTKEPVTFEEAVQHKEWRKAMEEEIVALKQNETWDLMPIPDGA 3784
+ Y+ + + +PVT+EEA+++ +W+KAM+EEI A+++N+TW+L +P+G
Sbjct: 839 PVETQFDYSLFCLMTE---CDPVTYEEAIENNKWKKAMDEEIAAIRRNDTWELTSLPEGH 895
Query: 3785 KPISCKWVYKVKRRLDGSIERYKSRLVARGFSQQYGLDYDETFSPVAKITTVRMLIALAT 3964
PI KWVYK K +G +E+YK+RLVA+G+ Q+ G+DYDE F+PVA+I T+R+LIA+A
Sbjct: 896 SPIGVKWVYKTKTNKEGKVEKYKARLVAKGYKQRQGVDYDEIFAPVARIDTIRLLIAVAA 955
Query: 3965 SKSWKLWQMDVKKAFLHGELDRDIYMEQPKGFENKENPGHVCKLKKALYGLKQAPRAWYG 4144
WK++QMDVK AFL+G L+ ++Y+EQP G+ + V +LKK+LYGLKQAPRAW
Sbjct: 956 QYKWKIYQMDVKSAFLNGYLEEEVYIEQPPGYSIQGKEDKVYRLKKSLYGLKQAPRAWNT 1015
Query: 4145 KIAEFLVQCGYSVAPADSSLFVKTQ-HGKLAIVLVYVDDLIVTGDDENEIQRTRTNLSVR 4321
+I E+ + G+ +P + +L+ K +G + IV +YVDD+I TG++ + ++
Sbjct: 1016 RIDEYFRRNGFIKSPHEHTLYTKKNGYGDIMIVCLYVDDMIFTGNNPGMSDDFKKAMTKE 1075
Query: 4322 FQMKELGELNHFLGLEMDRTKEGIFLCQQKYARDLLHKFGMIDCKPISTPIEINSKLC-D 4498
F+M ++GE+++FLG+E+ + ++GIF+ Q+KYA +L+KF M DCKP+ TP + KL D
Sbjct: 1076 FEMTDIGEMSYFLGVEVKQMQDGIFVSQKKYAEQILNKFKMKDCKPVVTPADPGMKLSVD 1135
Query: 4499 EGKDLENATMYRQLVGSLIYLTLTRPDIAYAVGIASRFMEKPKKPHLEVVRQILRYVKGT 4678
++ N T+++ LVGSL YLT+TRPDI YAVG+ SRFMEKPK+ HL ++ILRY+KGT
Sbjct: 1136 STRESINPTLFKSLVGSLRYLTITRPDITYAVGLVSRFMEKPKQDHLIAAKRILRYIKGT 1195
Query: 4679 IDYGLFYKKNKDCKVVGYCDADYAGCRDTRRSTTGYVFSLGSAAVSWCSKRQPTVSLSTX 4858
+++GLFY ++D K+VGY D+DY G D R+ST+GY F + SA SW SK+Q T++LST
Sbjct: 1196 MNHGLFYTHSQDSKLVGYSDSDYGGDLDDRKSTSGYAFHISSAVFSWSSKKQQTIALSTC 1255
Query: 4859 XXXXXXXXXXXXXSTWLMQLMADLYQPVSYATQLYCDNQSAIRIAENPVCHARTKHVEVH 5038
+ WL ++ ++ +Y DN+SAI +A+NPV H+R+KH++
Sbjct: 1256 EAEYMAAATCTCQAMWLKNILGEIGVSNEGPITIYVDNKSAISLAKNPVSHSRSKHIDTK 1315
Query: 5039 YHFVREKVLKGEIDLKHINTEEQVADVLTKGLSASKFEGFRTQLGI 5176
YHF+RE+V ++L H TE+Q+AD+ TK L F F+ +LG+
Sbjct: 1316 YHFIREQVKNKNVELVHCRTEDQLADIFTKPLKVETFNKFKEKLGM 1361
>emb|CAN61340.1| hypothetical protein VITISV_007301 [Vitis vinifera]
Length = 973
Score = 781 bits (2017), Expect = 0.0
Identities = 389/584 (66%), Positives = 458/584 (78%), Gaps = 1/584 (0%)
Frame = +2
Query: 3434 EIENSQESSDEEEPMRTTQGPWQTGVHQPTPEENRPIQQEEVEVPTSPQPQLRKSTRQRK 3613
E EN + E++ TQ PWQTGVH EE P + E +P P LR+S R +K
Sbjct: 407 EAENVADGDIEDDE---TQSPWQTGVHGQPSEEGEPSETE------APIP-LRRSARTKK 456
Query: 3614 PNPKYANAVVEEDESTKEPVTFEEAVQHKEWRKAMEEEIVALKQNETWDLMPIPDGAKPI 3793
PNPKYAN + ED + KEP TF EA Q+ +W KA++EEI ALKQN+TW+L+P P +PI
Sbjct: 457 PNPKYANVAIVEDANAKEPETFAEAFQNPDWTKAIKEEIAALKQNQTWELVPKPRDVEPI 516
Query: 3794 SCKWVYKVKRRLDGSIERYKSRLVARGFSQQYGLDYDETFSPVAKITTVRMLIALATSKS 3973
SCKWVYK+KRR DGSIER+K+RLVARGFSQQYGLDYDETFSPVAK+TTVR+L+ALA +K
Sbjct: 517 SCKWVYKIKRRTDGSIERHKARLVARGFSQQYGLDYDETFSPVAKLTTVRVLLALAANKD 576
Query: 3974 WKLWQMDVKKAFLHGELDRDIYMEQPKGFENKENPGHVCKLKKALYGLKQAPRAWYGKIA 4153
W LWQMDVK AFLHGELDR+IYM QP GF ++ +P +VCKL+KALYGLKQAPRAWY
Sbjct: 577 WDLWQMDVKNAFLHGELDREIYMNQPXGFXSQGHPEYVCKLRKALYGLKQAPRAWY---- 632
Query: 4154 EFLVQCGYSVAPADSSLFVKTQHGKLAIVLVYVDDLIVTGDDENEIQRTRTNLSVRFQMK 4333
DSSLFVK GKL IVLVYVDDLI+T DD EI RT NLSVRF+MK
Sbjct: 633 -------------DSSLFVKANGGKLVIVLVYVDDLIITRDDVEEIFRTEENLSVRFEMK 679
Query: 4334 ELGELNHFLGLEMDRTKEGIFLCQQKYARDLLHKFGMIDCKPISTPIEINSKLCD-EGKD 4510
ELG+L HFLGLE+D T EGIFLCQQKYA+DLL KFGM++CK ISTP+E N+K+C+ EGKD
Sbjct: 680 ELGQLKHFLGLEVDCTHEGIFLCQQKYAKDLLKKFGMLECKSISTPMEPNAKMCEHEGKD 739
Query: 4511 LENATMYRQLVGSLIYLTLTRPDIAYAVGIASRFMEKPKKPHLEVVRQILRYVKGTIDYG 4690
L++ATMYRQLVGSL+YLTLTRPDI+YAVG+ SR+M+ PKKPHLE VR+ILR+VKGTIDYG
Sbjct: 740 LKDATMYRQLVGSLVYLTLTRPDISYAVGVMSRYMQNPKKPHLEAVRRILRHVKGTIDYG 799
Query: 4691 LFYKKNKDCKVVGYCDADYAGCRDTRRSTTGYVFSLGSAAVSWCSKRQPTVSLSTXXXXX 4870
L YKK +DCK+VGYCDADYAG DTRRSTTGYVF LGS A+SWCSKRQPTVSL T
Sbjct: 800 LLYKKGEDCKLVGYCDADYAGDHDTRRSTTGYVFMLGSGAISWCSKRQPTVSLLTTEAEY 859
Query: 4871 XXXXXXXXXSTWLMQLMADLYQPVSYATQLYCDNQSAIRIAENPVCHARTKHVEVHYHFV 5050
STWL++LM DL+Q V YA LYCDNQSA+R+AENPV HARTKHVEVHYHF+
Sbjct: 860 RAAAMAAQESTWLIRLMNDLHQLVDYAVPLYCDNQSAVRLAENPVFHARTKHVEVHYHFI 919
Query: 5051 REKVLKGEIDLKHINTEEQVADVLTKGLSASKFEGFRTQLGIMR 5182
REKVL+ E++LK I +++QVAD+ TKGLS SKFE F QLG+++
Sbjct: 920 REKVLEEEVELKQIKSKDQVADLFTKGLSGSKFECFCHQLGMVK 963
Score = 414 bits (1064), Expect = e-112
Identities = 225/451 (49%), Positives = 286/451 (63%), Gaps = 2/451 (0%)
Frame = +2
Query: 1250 MFAIKTTIDEELLEYIRDKNTPKEAWDTFAALFSKKNDLRLQFLENELLSITQGEMTINQ 1429
MFA+KTTI+E++LE+IRD TP EAW+TF LFSKKND RLQ LE+ELL + Q +TI Q
Sbjct: 1 MFALKTTIEEDVLEHIRDAKTPYEAWNTFTKLFSKKNDTRLQLLESELLLVAQCNLTIAQ 60
Query: 1430 YFNKVKSLCRXXXXXXXXXXXXXXRMRRIIIHGLRPEFRSFIAAIQGWPEQPSLINLENL 1609
YF+KVK+LCR RM+RIIIHGLRPE R F+AA+QGW QPSL+ ENL
Sbjct: 61 YFHKVKTLCREIFELDLEAPIGETRMKRIIIHGLRPELRGFVAAVQGWKNQPSLVEFENL 120
Query: 1610 LADQEALTKQMLGVSLKKEEEALFSYKKKGRFPRQNNXXXXXXXFIEGSQTRGAQENRDE 1789
LA QEAL KQM GVSLK EE+AL+++ KGR+ + + + +++ + +
Sbjct: 121 LAGQEALAKQMGGVSLKGEEKALYAH--KGRWNSKQHTVGRTKKNEDKAKSSQGERSARV 178
Query: 1790 RGQLSNRYRRP--NGSCFVCGKRGHYARDCRFRKKQAEGNMATSNEQEKYNSEEEWDAEA 1963
+G N R G C+ C K+G A+DC +K E N TS S++EWD +A
Sbjct: 179 KGDSKNLGTRKKFQGRCYNCRKKGXMAKDCWSKKGLVENNATTS------KSKDEWDTQA 232
Query: 1964 SIAVIEQTHEEVCSSSLEEKSALMAVVPGRIDYENDWIVDSGCSNHMTGDKEKLQNTAEY 2143
A + SA +A +IDYE DWI+DSGCSNHMTGDKEKLQ+ +EY
Sbjct: 233 FFAAXGE-------------SAFIATTSEQIDYEKDWIIDSGCSNHMTGDKEKLQDFSEY 279
Query: 2144 KGGRMVVTANNSRLPITHIGKTVITPRFSPSQVHLQDVYHVPGMKKNLLSVAQLTSSGNY 2323
KG MVVT NNS+LPI HI GMKKNLLSVAQLTSSG++
Sbjct: 280 KGRHMVVTXNNSKLPIAHI-----------------------GMKKNLLSVAQLTSSGHF 316
Query: 2324 VLFGPKDVKVYQNVKISGTPVMEGRRLESIYVMSAESAYVDKTRKNETTDLWHARLGHVS 2503
VLFGP+DVKVY++++I V++GRRLES+YVMSAE+AYV+KTRKNET +LWH RL H+S
Sbjct: 317 VLFGPQDVKVYRDLEIMEESVIKGRRLESVYVMSAETAYVNKTRKNETINLWHMRLSHIS 376
Query: 2504 YHXXXXXXXXXXXXXXPQLEIRDDMVCAGCQ 2596
Y P+LE+R D +CAGC+
Sbjct: 377 YSKLTVMMKKSMLKGLPELEMRKDTICAGCE 407
>gb|AAD50001.1|AC007259_14 Hypothetical protein [Arabidopsis thaliana]
Length = 1352
Score = 775 bits (2001), Expect = 0.0
Identities = 473/1414 (33%), Positives = 736/1414 (52%), Gaps = 50/1414 (3%)
Frame = +2
Query: 1091 VKKLNNQNYTTWQTCMESYLQGQDLWDVVGGSKVTPPEDAG-------ALKKWKIKAGKT 1249
V L NY W M++ L D+W++V + P + L+ + + K
Sbjct: 10 VPVLTKSNYDNWSLRMKAILGAHDVWEIVEKGFIEPENEGSLSQTQKDGLRDSRKRDKKA 69
Query: 1250 MFAIKTTIDEELLEYIRDKNTPKEAWDTFAALFSKKNDL---RLQFL--ENELLSITQGE 1414
+ I +DE+ E + + + KEAW+ + + + RLQ L E E L + +GE
Sbjct: 70 LCLIYQGLDEDTFEKVVEATSAKEAWEKLRTSYKGADQVKKVRLQTLRGEFEALQMKEGE 129
Query: 1415 MTINQYFNKVKSLCRXXXXXXXXXXXXXXRMRRIIIHGLRPEFRSFIAAIQGWPEQPSLI 1594
+ ++ YF++V ++ R+ ++ L +F + I+ + ++
Sbjct: 130 L-VSDYFSRVLTVTNNLKRNGEKLDDV--RIMEKVLRSLDLKFEHIVTVIEETKDLEAM- 185
Query: 1595 NLENLLADQEA----------LTKQMLGVSLKKEEEALFSYKKKGRFPRQNNXXXXXXXF 1744
+E LL +A + +Q+L + + KEE SY+++G + +
Sbjct: 186 TIEQLLGSLQAYEEKKKKKEDIVEQVLNMQITKEENGQ-SYQRRGGGQVRGRGRGG---Y 241
Query: 1745 IEGSQTRGAQENRDERGQLSNR----------YRRPNGSCFVCGKRGHYARDCRFRKKQA 1894
G R ++N ++RG+ S+R Y + + C+ CGK GHYA +C+
Sbjct: 242 GNGRGWRPHEDNTNQRGENSSRGRGKGHPKSRYDKSSVKCYNCGKFGHYASECK------ 295
Query: 1895 EGNMATSNE--QEKYNSEEEWDAEASIAVIEQTHEEVCSSSLEEKSALMAVVPGRIDYEN 2068
A SN+ +EK N EE EE LMA EN
Sbjct: 296 ----APSNKKFEEKANYVEE-------------------KIQEEDMLLMASYKKDEQKEN 332
Query: 2069 D-WIVDSGCSNHMTGDKEKLQNTAEYKGGRMVVTANNSRLPITHIGKTVITPRFSPSQVH 2245
W +DSG SNHM G K E G V + S++ + G +I + Q
Sbjct: 333 HKWYLDSGASNHMCGRKSMFAELDESVRGN-VALGDESKMEVKGKGNILIRLKNGDHQF- 390
Query: 2246 LQDVYHVPGMKKNLLSVAQLTSSGNYVLFGPKDVKVYQNVKISGTPVMEGRRLESIYVMS 2425
+ +VY++P MK N+LS+ QL G + ++ + T V + + +
Sbjct: 391 ISNVYYIPSMKTNILSLGQLLEKGYDIRLKDNNLSIRDQESNLITKVPMSKNRMFVLNIR 450
Query: 2426 AESAYVDKTRKNETTDLWHARLGHVSYHXXXXXXXXXXXXXXPQLEIRDDMVCAGCQYGK 2605
+ A K E + LWH R GH+++ P + + VC GC GK
Sbjct: 451 NDIAQCLKMCYKEESWLWHLRFGHLNFGGLELLSRKEMVRGLPCIN-HPNQVCEGCLLGK 509
Query: 2606 AHQLPY-QESNYRAKQPLELIHSDLFGPVKQPSIRGMCYMVTFIDDFSRYVWVXXXXXXX 2782
++ + +ES+ RA++PLELIH+D+ GP+K S+ Y + FIDDFSR WV
Sbjct: 510 QFKMSFPKESSSRAQKPLELIHTDVCGPIKPKSLGKSNYFLLFIDDFSRKTWVYFLKEKS 569
Query: 2783 XXXXXXXXXXXXXXXXXXXXIKCLRTDNGGEYTSGEFSQYLQEHKIHHQLTCPNTPQQNG 2962
IK +R+D GGE+TS EF +Y +++ I QLT P +PQQNG
Sbjct: 570 EVFEIFKKFKAHVEKESGLVIKTMRSDRGGEFTSKEFLKYCEDNGIRRQLTVPRSPQQNG 629
Query: 2963 VAERKNRHLVETCRSMLHAKNVPGRF*AECMRTAAHVINRLPQPKLGFVSPFEKLWKIKP 3142
V ERKNR ++E RSML +K +P AE + A +++NR P + +P E KP
Sbjct: 630 VVERKNRTILEMARSMLKSKRLPKELWAEAVACAVYLLNRSPTKSVSGKTPQEAWSGRKP 689
Query: 3143 TVSHFRVFGCVCYVFVPSHLRSKFDKKAIRCIFVGYDSQRKGWRCCDPTNDLCYTSRNVV 3322
VSH RVFG + + VP RSK D K+ + IF+GYD+ KG++ +P SRN+V
Sbjct: 690 GVSHLRVFGSIAHAHVPDEKRSKLDDKSEKYIFIGYDNNSKGYKLYNPDTKKTIISRNIV 749
Query: 3323 FDETSS*WTPQRVELPDSKKIGDKLQEEIVEVQKSHEEIENSQESSDEEEPMRTTQGPWQ 3502
FDE W S+EE N +E+EP
Sbjct: 750 FDEEGE-WD-----------------------WNSNEEDYNFFPHFEEDEP--------- 776
Query: 3503 TGVHQPTPEENRPIQQEEVEVPTSP-QPQLRKSTRQRKPNPKYANAVVEEDESTK----- 3664
+PT EE P +E PTSP Q+ +S+ +R P + + E E+ +
Sbjct: 777 ----EPTREE--PPSEEPTTPPTSPTSSQIEESSSERTPRFRSIQELYEVTENQENLTLF 830
Query: 3665 ------EPVTFEEAVQHKEWRKAMEEEIVALKQNETWDLMPIPDGAKPISCKWVYKVKRR 3826
EP+ F++A++ K WR AM+EEI ++++N+TW+L +P+G K I KWVYK K+
Sbjct: 831 CLFAECEPMDFQKAIEKKTWRNAMDEEIKSIQKNDTWELTSLPNGHKAIGVKWVYKAKKN 890
Query: 3827 LDGSIERYKSRLVARGFSQQYGLDYDETFSPVAKITTVRMLIALATSKSWKLWQMDVKKA 4006
G +ERYK+RLVA+G+SQ+ G+DYDE F+PVA++ TVR++I+LA WK+ QMDVK A
Sbjct: 891 SKGEVERYKARLVAKGYSQRVGIDYDEVFAPVARLETVRLIISLAAQNKWKIHQMDVKSA 950
Query: 4007 FLHGELDRDIYMEQPKGFENKENPGHVCKLKKALYGLKQAPRAWYGKIAEFLVQCGYSVA 4186
FL+G+L+ ++Y+EQP+G+ K V +LKK LYGLKQAPRAW +I ++ + +
Sbjct: 951 FLNGDLEEEVYIEQPQGYIVKGEEDKVLRLKKVLYGLKQAPRAWNTRIDKYFKEKDFIKC 1010
Query: 4187 PADSSLFVKTQHGKLAIVLVYVDDLIVTGDDENEIQRTRTNLSVRFQMKELGELNHFLGL 4366
P + +L++K Q + I +YVDDLI TG++ + + + ++ F+M ++G ++++LG+
Sbjct: 1011 PYEHALYIKIQKEDILIACLYVDDLIFTGNNPSIFEEFKKEMTKEFEMTDIGLMSYYLGI 1070
Query: 4367 EMDRTKEGIFLCQQKYARDLLHKFGMIDCKPISTPIEINSKLC--DEGKDLENATMYRQL 4540
E+ + GIF+ Q+ YA+++L KF M D P+ TP+E KL +EG+ ++ T ++ L
Sbjct: 1071 EVKQEDNGIFITQEGYAKEVLKKFKMDDSNPVCTPMECGIKLSKKEEGEGVD-PTTFKSL 1129
Query: 4541 VGSLIYLTLTRPDIAYAVGIASRFMEKPKKPHLEVVRQILRYVKGTIDYGLFYKKNKDCK 4720
VGSL YLT TRPDI YAVG+ SR+ME P H + ++ILRY+KGT+++GL Y D K
Sbjct: 1130 VGSLRYLTCTRPDILYAVGVVSRYMEHPTTTHFKAAKRILRYIKGTVNFGLHYSTTSDYK 1189
Query: 4721 VVGYCDADYAGCRDTRRSTTGYVFSLGSAAVSWCSKRQPTVSLSTXXXXXXXXXXXXXXS 4900
+VGY D+D+ G D R+ST+G+VF +G A +W SK+QP V+LST +
Sbjct: 1190 LVGYSDSDWGGDVDDRKSTSGFVFYIGDTAFTWMSKKQPIVTLSTCEAEYVAATSCVCHA 1249
Query: 4901 TWLMQLMADLYQPVSYATQLYCDNQSAIRIAENPVCHARTKHVEVHYHFVREKVLKGEID 5080
WL L+ +L P T+++ DN+SAI +A+NPV H R+KH++ YH++RE V K ++
Sbjct: 1250 IWLRNLLKELSLPQEEPTKIFVDNKSAIALAKNPVFHDRSKHIDTRYHYIRECVSKKDVQ 1309
Query: 5081 LKHINTEEQVADVLTKGLSASKFEGFRTQLGIMR 5182
L+++ T +QVAD TK L F R+ LG+ +
Sbjct: 1310 LEYVKTHDQVADFFTKPLKRENFIKMRSLLGVAK 1343
>emb|CAB71063.1| copia-type polyprotein [Arabidopsis thaliana]
Length = 1352
Score = 772 bits (1993), Expect = 0.0
Identities = 469/1412 (33%), Positives = 734/1412 (51%), Gaps = 48/1412 (3%)
Frame = +2
Query: 1091 VKKLNNQNYTTWQTCMESYLQGQDLWDVVGGSKVTPPEDAG-------ALKKWKIKAGKT 1249
V L NY W M++ L D+W++V + P + L+ + + K
Sbjct: 10 VPVLTKSNYDNWSLRMKAILGAHDVWEIVEKGFIEPENEGSLSQTQKDGLRDSRKRDKKA 69
Query: 1250 MFAIKTTIDEELLEYIRDKNTPKEAWDTFAALFSKKNDL---RLQFL--ENELLSITQGE 1414
+ I +DE+ E + + + KEAW+ + + + RLQ L E E L + +GE
Sbjct: 70 LCLIYQGLDEDTFEKVVEATSAKEAWEKLRTSYKGADQVKKVRLQTLRGEFEALQMKEGE 129
Query: 1415 MTINQYFNKVKSLCRXXXXXXXXXXXXXXRMRRIIIHGLRPEFRSFIAAIQGWPEQPSLI 1594
+ ++ YF++V ++ R+ ++ L +F + I+ + ++
Sbjct: 130 L-VSDYFSRVLTVTNNLKRNGEKLDDV--RIMEKVLRSLDLKFEHIVTVIEETKDLEAM- 185
Query: 1595 NLENLLADQEA----------LTKQMLGVSLKKEEEALFSYKKKGRFPRQNNXXXXXXXF 1744
+E LL +A + +Q+L + + KEE SY+++G + +
Sbjct: 186 TIEQLLGSLQAYEEKKKKKEDIAEQVLNMQITKEENGQ-SYQRRGGGQVRGRGRGG---Y 241
Query: 1745 IEGSQTRGAQENRDERGQLSNR----------YRRPNGSCFVCGKRGHYARDCRFRKKQA 1894
G R ++N ++RG+ S+R Y + + C+ CGK GHYA +C+
Sbjct: 242 GNGRGWRPHEDNTNQRGENSSRGRGKGHPKSRYDKSSVKCYNCGKFGHYASECK------ 295
Query: 1895 EGNMATSNEQEKYNSEEEWDAEASIAVIEQTHEEVCSSSLEEKSALMAVVPGRIDYEND- 2071
A SN++ E+ V EE LMA EN
Sbjct: 296 ----APSNKK-----------------FEEKAHYVEEKIQEEDMLLMASYKKDEQKENHK 334
Query: 2072 WIVDSGCSNHMTGDKEKLQNTAEYKGGRMVVTANNSRLPITHIGKTVITPRFSPSQVHLQ 2251
W +DSG SNHM G K E G V + S++ + G +I + Q +
Sbjct: 335 WYLDSGASNHMCGRKSMFAELDESVRGN-VALGDESKMEVKGKGNILIRLKNGDHQF-IS 392
Query: 2252 DVYHVPGMKKNLLSVAQLTSSGNYVLFGPKDVKVYQNVKISGTPVMEGRRLESIYVMSAE 2431
+VY++P MK N+LS+ QL G + ++ + T V + + + +
Sbjct: 393 NVYYIPSMKTNILSLGQLLEKGYDIRLKDNNLSIRDQESNLITKVPMSKNRMFVLNIRND 452
Query: 2432 SAYVDKTRKNETTDLWHARLGHVSYHXXXXXXXXXXXXXXPQLEIRDDMVCAGCQYGKAH 2611
A K E + LWH R GH+++ P + + VC GC GK
Sbjct: 453 IAQCLKMCYKEESWLWHLRFGHLNFGGLELLSRKEMVRGLPCIN-HPNQVCEGCLLGKQF 511
Query: 2612 QLPY-QESNYRAKQPLELIHSDLFGPVKQPSIRGMCYMVTFIDDFSRYVWVXXXXXXXXX 2788
++ + +ES+ RA++PLELIH+D+ GP+K S+ Y + FIDDFSR WV
Sbjct: 512 KMSFPKESSSRAQKPLELIHTDVCGPIKPKSLGKSNYFLLFIDDFSRKTWVYFLKEKSEV 571
Query: 2789 XXXXXXXXXXXXXXXXXXIKCLRTDNGGEYTSGEFSQYLQEHKIHHQLTCPNTPQQNGVA 2968
IK +R+D GGE+TS EF +Y +++ I QLT P +PQQNGV
Sbjct: 572 FEIFKKFKAHVEKESGLVIKTMRSDRGGEFTSKEFLKYCEDNGIRRQLTVPRSPQQNGVV 631
Query: 2969 ERKNRHLVETCRSMLHAKNVPGRF*AECMRTAAHVINRLPQPKLGFVSPFEKLWKIKPTV 3148
ERKNR ++E RSML +K +P AE + A +++NR P + +P E KP V
Sbjct: 632 ERKNRTILEMARSMLKSKRLPKELWAEAVACAVYLLNRSPTKSVSGKTPQEAWSGRKPGV 691
Query: 3149 SHFRVFGCVCYVFVPSHLRSKFDKKAIRCIFVGYDSQRKGWRCCDPTNDLCYTSRNVVFD 3328
SH RVFG + + VP RSK D K+ + IF+GYD+ KG++ +P SRN+VFD
Sbjct: 692 SHLRVFGSIAHAHVPDEKRSKLDDKSEKYIFIGYDNNSKGYKLYNPDTKKTIISRNIVFD 751
Query: 3329 ETSS*WTPQRVELPDSKKIGDKLQEEIVEVQKSHEEIENSQESSDEEEPMRTTQGPWQTG 3508
E W S+EE N +E+EP
Sbjct: 752 EEGE-WD-----------------------WNSNEEDYNFFPHFEEDEP----------- 776
Query: 3509 VHQPTPEENRPIQQEEVEVPTSP-QPQLRKSTRQRKPNPKYANAVVEEDESTK------- 3664
+PT EE P +E PTSP Q+ +S+ +R P + + E E+ +
Sbjct: 777 --EPTREE--PPSEEPTTPPTSPTSSQIEESSSERTPRFRSIQELYEVTENQENLTLFCL 832
Query: 3665 ----EPVTFEEAVQHKEWRKAMEEEIVALKQNETWDLMPIPDGAKPISCKWVYKVKRRLD 3832
EP+ F++A++ K WR AM+EEI ++++N+TW+L +P+G K I KWVYK K+
Sbjct: 833 FAECEPMDFQKAIEKKTWRNAMDEEIKSIQKNDTWELTSLPNGHKAIGVKWVYKAKKNSK 892
Query: 3833 GSIERYKSRLVARGFSQQYGLDYDETFSPVAKITTVRMLIALATSKSWKLWQMDVKKAFL 4012
G +ERYK+RLVA+G+SQ+ G+DYDE F+PVA++ TVR++I+LA WK+ QMDVK AFL
Sbjct: 893 GEVERYKARLVAKGYSQRVGIDYDEVFAPVARLETVRLIISLAAQNKWKIHQMDVKSAFL 952
Query: 4013 HGELDRDIYMEQPKGFENKENPGHVCKLKKALYGLKQAPRAWYGKIAEFLVQCGYSVAPA 4192
+G+L+ ++Y+EQP+G+ K V +LKK LYGLKQAPRAW +I ++ + + P
Sbjct: 953 NGDLEEEVYIEQPQGYIVKGEEDKVLRLKKVLYGLKQAPRAWNTRIDKYFKEKDFIKCPY 1012
Query: 4193 DSSLFVKTQHGKLAIVLVYVDDLIVTGDDENEIQRTRTNLSVRFQMKELGELNHFLGLEM 4372
+ +L++K Q + I +YVDDLI TG++ + + + ++ F+M ++G ++++LG+E+
Sbjct: 1013 EHALYIKIQKEDILIACLYVDDLIFTGNNPSIFEEFKKEMTKEFEMTDIGLMSYYLGIEV 1072
Query: 4373 DRTKEGIFLCQQKYARDLLHKFGMIDCKPISTPIEINSKLC--DEGKDLENATMYRQLVG 4546
+ GIF+ Q+ YA+++L KF + D P+ TP+E KL +EG+ ++ T ++ LVG
Sbjct: 1073 KQEDNGIFITQEGYAKEVLKKFKIDDSNPVCTPMECGIKLSKKEEGEGVD-PTTFKSLVG 1131
Query: 4547 SLIYLTLTRPDIAYAVGIASRFMEKPKKPHLEVVRQILRYVKGTIDYGLFYKKNKDCKVV 4726
SL YLT TRPDI YAVG+ SR+ME P H + ++ILRY+KGT+++GL Y D K+V
Sbjct: 1132 SLRYLTCTRPDILYAVGVVSRYMEHPTTTHFKAAKRILRYIKGTVNFGLHYSTTSDYKLV 1191
Query: 4727 GYCDADYAGCRDTRRSTTGYVFSLGSAAVSWCSKRQPTVSLSTXXXXXXXXXXXXXXSTW 4906
GY D+D+ G D R+ST+G+VF +G A +W SK+QP V+LST + W
Sbjct: 1192 GYSDSDWGGDVDDRKSTSGFVFYIGDTAFTWMSKKQPIVTLSTCEAEYVAATSCVCHAIW 1251
Query: 4907 LMQLMADLYQPVSYATQLYCDNQSAIRIAENPVCHARTKHVEVHYHFVREKVLKGEIDLK 5086
L L+ +L P T+++ DN+SAI +A+NPV H R+KH++ YH++RE V K ++ L+
Sbjct: 1252 LRNLLKELSLPQEEPTKIFVDNKSAIALAKNPVFHDRSKHIDTRYHYIRECVSKKDVQLE 1311
Query: 5087 HINTEEQVADVLTKGLSASKFEGFRTQLGIMR 5182
++ T +QVAD TK L F R+ LG+ +
Sbjct: 1312 YVKTHDQVADFFTKPLKRENFIKMRSLLGVAK 1343
>gb|AAT38758.1| Putative gag-pol polyprotein, identical [Solanum demissum]
Length = 1333
Score = 771 bits (1991), Expect = 0.0
Identities = 479/1380 (34%), Positives = 729/1380 (52%), Gaps = 24/1380 (1%)
Frame = +2
Query: 1109 QNYTTWQTCMESYLQGQDLWDVVGGSKVTPPEDAGALKKWKIKAGKTMFAIKTTIDEELL 1288
+NY W M++ + Q+LWD+V P +A +++ + + K +F I+ +D+E+
Sbjct: 20 ENYQFWSLKMKTLFKSQELWDIVETG--IPEGNANQMREHRKRDSKALFTIQQALDDEIF 77
Query: 1289 EYIRDKNTPKEAWDTFAALF---SKKNDLRLQFLENELLSITQGEM-TINQYFNKVKSLC 1456
I T K+AW+ + K ++LQ L + ++ E ++ Y ++ ++
Sbjct: 78 PRISAVETSKQAWEILKQEYFGDDKVITVKLQTLRRDFETLFMNENESVQGYLSRTSAIV 137
Query: 1457 RXXXXXXXXXXXXXXRMRRIIIHGLRPEFRSFIAAIQGWPEQPSLIN------LENLLAD 1618
+ ++ L +F + AI+ E L + +LLA
Sbjct: 138 NRMRSYGEKIDNQIVVSK--VLRSLTTKFEHVVTAIE---ESKDLSTYSFDELMSSLLAH 192
Query: 1619 QEALTKQMLGVSLKK-EEEALFSYKKK-----GRFPRQNNXXXXXXXFIEGSQTRGAQEN 1780
++ L + V K + + FSYK K GR + N G G+
Sbjct: 193 EDRLNRSREKVQEKAFQVKGEFSYKGKAENSAGRGHGRGN--------FRGRGRGGSGRG 244
Query: 1781 RDERGQLSNRYRRPNGSCFVCGKRGHYARDCRFRKKQAEGNMATSNEQEKYNSEEEWDAE 1960
R++ G+ R + N C C K GH DC ++K +E+ DA
Sbjct: 245 RNQVGEF--RQYKSNIQCRYCKKFGHKEVDCWTKQK-----------------DEQKDAN 285
Query: 1961 ASIAVIEQTHEEVCSSSLEEKSALMAVVPGRIDYENDWIVDSGCSNHMTGDKEKLQNTAE 2140
+ V E++ + SS + E + + W +DSGCSNHM+ K ++ E
Sbjct: 286 FTQNVEEESKLFMASSQITESANAV------------WFIDSGCSNHMSSSKSLFRDLDE 333
Query: 2141 YKGGRMVVTANNSRLPITHIGKTVITPRFSPSQVHLQDVYHVPGMKKNLLSVAQLTSSGN 2320
+ V ++ ++ I G TV + L DV +VP + NLLSV QL +SG
Sbjct: 334 SQKSE-VRLGDDKQVHIEGKG-TVEIKTVQGNVKFLYDVQYVPTLAHNLLSVGQLMTSGY 391
Query: 2321 YVLFGPK--DVKVYQNVKISGTPVMEGRRLESIYVMSAESAYVDKTRKNETTDLWHARLG 2494
V+F D+K ++ + M ++ + + + ++ + KNET +LWH R G
Sbjct: 392 SVVFYDNACDIKDKESGRTIARVPMTQNKMFPLDISNVGNSALVVKEKNET-NLWHLRYG 450
Query: 2495 HVSYHXXXXXXXXXXXXXXPQLEIRDDMVCAGCQYGKAHQLPYQES-NYRAKQPLELIHS 2671
H++ + P ++ D +C GC YGK + + ++RA LEL+H+
Sbjct: 451 HLNVNWLKLLVQKDMVIGLPNIKELD--LCEGCIYGKQTRKSFPVGKSWRATTCLELVHA 508
Query: 2672 DLFGPVKQPSIRGMCYMVTFIDDFSRYVWVXXXXXXXXXXXXXXXXXXXXXXXXXXXIKC 2851
DL GP+K S+ G Y + F DD+SR+ WV IK
Sbjct: 509 DLCGPMKMESLGGSRYFLMFTDDYSRFSWVYFLKFKSETFETFKKFKAFVENQSGNKIKS 568
Query: 2852 LRTDNGGEYTSGEFSQYLQEHKIHHQLTCPNTPQQNGVAERKNRHLVETCRSMLHAKNVP 3031
LRTD GGE+ S +F+ + +E+ I +LT P TP+QNGVAERKNR +VE RS L AK +P
Sbjct: 569 LRTDRGGEFLSNDFNLFCEENGIRRELTAPYTPEQNGVAERKNRTVVEMARSSLKAKGLP 628
Query: 3032 GRF*AECMRTAAHVINRLPQPKLGFVSPFEKLWKIKPTVSHFRVFGCVCYVFVPSHLRSK 3211
F E + T + +N P + +P E KP VSH R+FGC+ Y V H SK
Sbjct: 629 DYFWGEAVATVVYFLNISPTKDVWNTTPLEAWNGKKPRVSHLRIFGCIAYALVNFH--SK 686
Query: 3212 FDKKAIRCIFVGYDSQRKGWRCCDPTNDLCYTSRNVVFDETSS*WTPQRVELPDSKKIGD 3391
D+K+ +CIFVGY Q K +R +P + SRNVVF+E S W + + ++
Sbjct: 687 LDEKSTKCIFVGYSLQSKAYRLYNPISGKVIISRNVVFNEDVS-WNFNSGNMMSNIQLLP 745
Query: 3392 KLQEEIVEVQKSHEEIENSQESSDEEEPMRTTQGPWQTGVHQPTPEENRPIQQEEVEVPT 3571
+E V+ S S S P TT P ++ V +P P
Sbjct: 746 TDEESAVDFGNSPNSSPVSSSVSSPIAPS-TTVAPDESSV-EPIP--------------- 788
Query: 3572 SPQPQLRKSTRQRKPNPKYANAVVEEDEST---KEPVTFEEAVQHKEWRKAMEEEIVALK 3742
LR+STR++KPNPKY+N V + +P+ +EEAV+ EW+ AM EEI A++
Sbjct: 789 -----LRRSTREKKPNPKYSNTVNTSCQFALLVSDPICYEEAVEQSEWKNAMIEEIQAIE 843
Query: 3743 QNETWDLMPIPDGAKPISCKWVYKVKRRLDGSIERYKSRLVARGFSQQYGLDYDETFSPV 3922
+N TW+L+ P+G I KWV++ K DGSI+++K+RLVA+G+SQQ G+D+DETFSPV
Sbjct: 844 RNSTWELVDAPEGKNVIGLKWVFRTKYNADGSIQKHKARLVAKGYSQQQGVDFDETFSPV 903
Query: 3923 AKITTVRMLIALATSKSWKLWQMDVKKAFLHGELDRDIYMEQPKGFENKENPGHVCKLKK 4102
A+ TVR+++ALA ++Q DVK AFL+G+L+ ++Y+ QP+GF N V KL+K
Sbjct: 904 ARFETVRVVLALAAQLHLPVYQFDVKSAFLNGDLEEEVYVSQPQGFMITGNENKVYKLRK 963
Query: 4103 ALYGLKQAPRAWYGKIAEFLVQCGYSVAPADSSLFVKTQH-GKLAIVLVYVDDLIVTGDD 4279
ALYGLKQAPRAWY KI F G+ + + +L++K Q + +V +YVDD+I G
Sbjct: 964 ALYGLKQAPRAWYSKIDSFFQGSGFRRSDNEPTLYLKKQGTDEFLLVCLYVDDMIYIGSS 1023
Query: 4280 ENEIQRTRTNLSVRFQMKELGELNHFLGLEMDRTKEGIFLCQQKYARDLLHKFGMIDCKP 4459
++ + ++N+ F+M +LG L +FLGLE+ + K+GIF+ Q+KYA DLL KF M++C+
Sbjct: 1024 KSLVNDFKSNMMRNFEMSDLGLLKYFLGLEVIQDKDGIFISQKKYAEDLLKKFQMMNCEV 1083
Query: 4460 ISTPIEINSKLCD-EGKDLENATMYRQLVGSLIYLTLTRPDIAYAVGIASRFMEKPKKPH 4636
+TP+ IN KL +G + N ++R LVG L YLT TRPDIA++V + SRF++ P K H
Sbjct: 1084 ATTPMNINEKLQRADGTEKANPKLFRSLVGGLNYLTHTRPDIAFSVSVVSRFLQSPTKQH 1143
Query: 4637 LEVVRQILRYVKGTIDYGLFYKKNKDCKVVGYCDADYAGCRDTRRSTTGYVFSLGSAAVS 4816
+++LRYV GT D+G++Y K + ++VG+ D+DYAGC D R+ST+G FS GS V+
Sbjct: 1144 FGAAKRVLRYVAGTTDFGIWYSKAPNFRLVGFTDSDYAGCLDDRKSTSGSCFSFGSGVVT 1203
Query: 4817 WCSKRQPTVSLSTXXXXXXXXXXXXXXSTWLMQLMADLYQPVSYATQLYCDNQSAIRIAE 4996
W SK+Q TV+LST + WL +L+ D +T+++ D++SAI +A+
Sbjct: 1204 WSSKKQETVALSTSEAEYTAASLAARQALWLRKLLEDFSYEQKESTEIFSDSKSAIAMAK 1263
Query: 4997 NPVCHARTKHVEVHYHFVREKVLKGEIDLKHINTEEQVADVLTKGLSASKFEGFRTQLGI 5176
NP H RTKH++V YHF+R V G I LK +T EQ AD+ TK L +K E FR QLG+
Sbjct: 1264 NPSFHGRTKHIDVQYHFIRTLVADGRIVLKFCSTNEQAADIFTKSLPQAKHEYFRLQLGV 1323
>gb|AAG60117.1|AC073555_1 copia-type polyprotein, putative [Arabidopsis thaliana]
Length = 1352
Score = 771 bits (1990), Expect = 0.0
Identities = 473/1414 (33%), Positives = 735/1414 (51%), Gaps = 50/1414 (3%)
Frame = +2
Query: 1091 VKKLNNQNYTTWQTCMESYLQGQDLWDVVGGSKVTPPEDAG-------ALKKWKIKAGKT 1249
V L NY W M++ L D+W++V + P + L+ + + K
Sbjct: 10 VPVLTKSNYDNWSLRMKAILGAHDVWEIVEKGFIEPENEGSLSQTQKDGLRDSRKRDKKA 69
Query: 1250 MFAIKTTIDEELLEYIRDKNTPKEAWDTFAALFSKKNDL---RLQFL--ENELLSITQGE 1414
+ I +DE+ E + + + KEAW+ + + + RLQ L E E L + +GE
Sbjct: 70 LCLIYQGLDEDTFEKVVEATSAKEAWEKLRTSYKGADQVKKVRLQTLRGEFEALQMKEGE 129
Query: 1415 MTINQYFNKVKSLCRXXXXXXXXXXXXXXRMRRIIIHGLRPEFRSFIAAIQGWPEQPSLI 1594
+ ++ YF++V ++ R+ ++ L +F + I+ + ++
Sbjct: 130 L-VSDYFSRVLTVTNNLKRNGEKLDDV--RIMEKVLRSLDLKFEHIVTVIEETKDLEAM- 185
Query: 1595 NLENLLADQEA----------LTKQMLGVSLKKEEEALFSYKKKGRFPRQNNXXXXXXXF 1744
+E LL +A + +Q+L + + KEE SY+++G + +
Sbjct: 186 TIEQLLGSLQAYEEKKKKKEDIIEQVLNMQITKEENGQ-SYQRRGGGQVRGRGRGG---Y 241
Query: 1745 IEGSQTRGAQENRDERGQLSNR----------YRRPNGSCFVCGKRGHYARDCRFRKKQA 1894
G R ++N ++RG+ S+R Y + + C+ CGK GHYA +C+
Sbjct: 242 GNGRGWRPHEDNTNQRGENSSRGRGKGHPKSRYDKSSVKCYNCGKFGHYASECK------ 295
Query: 1895 EGNMATSNE--QEKYNSEEEWDAEASIAVIEQTHEEVCSSSLEEKSALMAVVPGRIDYEN 2068
A SN+ +EK N EE EE LMA EN
Sbjct: 296 ----APSNKKFEEKANYVEE-------------------KIQEEDMLLMASYKKDEQEEN 332
Query: 2069 D-WIVDSGCSNHMTGDKEKLQNTAEYKGGRMVVTANNSRLPITHIGKTVITPRFSPSQVH 2245
W +DSG SNHM G K E G V + S++ + G +I + Q
Sbjct: 333 HKWYLDSGASNHMCGRKSMFAELDESVRGN-VALGDESKMEVKGKGNILIRLKNGDHQF- 390
Query: 2246 LQDVYHVPGMKKNLLSVAQLTSSGNYVLFGPKDVKVYQNVKISGTPVMEGRRLESIYVMS 2425
+ +VY++P MK N+LS+ QL G + ++ + T V + + +
Sbjct: 391 ISNVYYIPSMKTNILSLGQLLEKGYDIRLKDNNLSIRDQESNLITKVPMSKNRMFVLNIR 450
Query: 2426 AESAYVDKTRKNETTDLWHARLGHVSYHXXXXXXXXXXXXXXPQLEIRDDMVCAGCQYGK 2605
+ A K E + LWH R GH+++ P + + VC GC GK
Sbjct: 451 NDIAQCLKMCYKEESWLWHLRFGHLNFGGLELLSRKEMVRGLPCIN-HPNQVCEGCLLGK 509
Query: 2606 AHQLPY-QESNYRAKQPLELIHSDLFGPVKQPSIRGMCYMVTFIDDFSRYVWVXXXXXXX 2782
++ + +ES+ RA++ LELIH+D+ GP+K S+ Y + FIDDFSR WV
Sbjct: 510 QFKMSFPKESSSRAQKSLELIHTDVCGPIKPKSLGKSNYFLLFIDDFSRKTWVYFLKEKS 569
Query: 2783 XXXXXXXXXXXXXXXXXXXXIKCLRTDNGGEYTSGEFSQYLQEHKIHHQLTCPNTPQQNG 2962
IK +R+D GGE+TS EF +Y +++ I QLT P +PQQNG
Sbjct: 570 EVFEIFKKFKAHVEKESGLVIKTMRSDRGGEFTSKEFLKYCEDNGIRRQLTVPRSPQQNG 629
Query: 2963 VAERKNRHLVETCRSMLHAKNVPGRF*AECMRTAAHVINRLPQPKLGFVSPFEKLWKIKP 3142
VAERKNR ++E RSML +K +P AE + A +++NR P + +P E K
Sbjct: 630 VAERKNRTILEMARSMLKSKRLPKELWAEAVACAVYLLNRSPTKSVSGKTPQEAWSGRKS 689
Query: 3143 TVSHFRVFGCVCYVFVPSHLRSKFDKKAIRCIFVGYDSQRKGWRCCDPTNDLCYTSRNVV 3322
VSH RVFG + + VP RSK D K+ + IF+GYD+ KG++ +P SRN+V
Sbjct: 690 GVSHLRVFGSIAHAHVPDEKRSKLDDKSEKYIFIGYDNNSKGYKLYNPDTKKTIISRNIV 749
Query: 3323 FDETSS*WTPQRVELPDSKKIGDKLQEEIVEVQKSHEEIENSQESSDEEEPMRTTQGPWQ 3502
FDE W S+EE N +E+EP
Sbjct: 750 FDEEGE-WD-----------------------WNSNEEDYNFFPHFEEDEP--------- 776
Query: 3503 TGVHQPTPEENRPIQQEEVEVPTSP-QPQLRKSTRQRKPNPKYANAVVEEDESTK----- 3664
+PT EE P +E PTSP Q+ +S+ +R P + + E E+ +
Sbjct: 777 ----EPTREE--PPSEEPTTPPTSPTSSQIEESSSERTPRFRSIQELYEVTENQENLTLF 830
Query: 3665 ------EPVTFEEAVQHKEWRKAMEEEIVALKQNETWDLMPIPDGAKPISCKWVYKVKRR 3826
EP+ F+EA++ K WR AM+EEI ++++N+TW+L +P+G K I KWVYK K+
Sbjct: 831 CLFAECEPMDFQEAIEKKTWRNAMDEEIKSIQKNDTWELTSLPNGHKTIGVKWVYKAKKN 890
Query: 3827 LDGSIERYKSRLVARGFSQQYGLDYDETFSPVAKITTVRMLIALATSKSWKLWQMDVKKA 4006
G +ERYK+RLVA+G+ Q+ G+DYDE F+PVA++ TVR++I+LA WK+ QMDVK A
Sbjct: 891 SKGEVERYKARLVAKGYIQRAGIDYDEVFAPVARLETVRLIISLAAQNKWKIHQMDVKSA 950
Query: 4007 FLHGELDRDIYMEQPKGFENKENPGHVCKLKKALYGLKQAPRAWYGKIAEFLVQCGYSVA 4186
FL+G+L+ ++Y+EQP+G+ K V +LKKALYGLKQAPRAW +I ++ + +
Sbjct: 951 FLNGDLEEEVYIEQPQGYIVKGEEDKVLRLKKALYGLKQAPRAWNTRIDKYFKEKDFIKC 1010
Query: 4187 PADSSLFVKTQHGKLAIVLVYVDDLIVTGDDENEIQRTRTNLSVRFQMKELGELNHFLGL 4366
P + +L++K Q + I +YVDDLI TG++ + + + ++ F+M ++G ++++LG+
Sbjct: 1011 PYEHALYIKIQKEDILIACLYVDDLIFTGNNPSMFEEFKKEMTKEFEMTDIGLMSYYLGI 1070
Query: 4367 EMDRTKEGIFLCQQKYARDLLHKFGMIDCKPISTPIEINSKLC--DEGKDLENATMYRQL 4540
E+ + GIF+ Q+ YA+++L KF M D P+ TP+E KL +EG+ ++ T ++ L
Sbjct: 1071 EVKQEDNGIFITQEGYAKEVLKKFKMDDSNPVCTPMECGIKLSKKEEGEGVD-PTTFKSL 1129
Query: 4541 VGSLIYLTLTRPDIAYAVGIASRFMEKPKKPHLEVVRQILRYVKGTIDYGLFYKKNKDCK 4720
VGSL YLT TRPDI YAVG+ SR+ME P H + ++ILRY+KGT+++GL Y D K
Sbjct: 1130 VGSLRYLTCTRPDILYAVGVVSRYMEHPTTTHFKAAKRILRYIKGTVNFGLHYSTTSDYK 1189
Query: 4721 VVGYCDADYAGCRDTRRSTTGYVFSLGSAAVSWCSKRQPTVSLSTXXXXXXXXXXXXXXS 4900
+VGY D+D+ G D R+ST+G+VF +G A +W SK+QP V LST +
Sbjct: 1190 LVGYSDSDWGGDVDDRKSTSGFVFYIGDTAFTWMSKKQPIVVLSTCEAEYVAATSCVCHA 1249
Query: 4901 TWLMQLMADLYQPVSYATQLYCDNQSAIRIAENPVCHARTKHVEVHYHFVREKVLKGEID 5080
WL L+ +L P T+++ DN+SAI +A+NPV H R+KH++ YH++RE V K ++
Sbjct: 1250 IWLRNLLKELSLPQEEPTKIFVDNKSAIALAKNPVFHDRSKHIDTRYHYIRECVSKKDVQ 1309
Query: 5081 LKHINTEEQVADVLTKGLSASKFEGFRTQLGIMR 5182
L+++ T +QVAD+ TK L F R+ LG+ +
Sbjct: 1310 LEYVKTHDQVADIFTKPLKREDFIKMRSLLGVAK 1343
>emb|CAB75932.1| putative protein [Arabidopsis thaliana]
Length = 1339
Score = 762 bits (1968), Expect = 0.0
Identities = 462/1400 (33%), Positives = 738/1400 (52%), Gaps = 39/1400 (2%)
Frame = +2
Query: 1115 YTTWQTCMESYLQGQDLWDVVGGS------KVTPPEDA--GALKKWKIKAGKTMFAIKTT 1270
Y W ME++L+ ++LW +V TP +A A+++ K+K K +
Sbjct: 19 YDFWSMTMENFLRSRELWRLVEEGIPAIVVGTTPVSEAQRSAVEEAKLKDLKVKNFLFQA 78
Query: 1271 IDEELLEYIRDKNTPKEAWDTFAALFS-----KKNDLRLQFLENELLSITQGEMTINQYF 1435
ID E+LE I DK+T K W++ + K+ L+ E ELL++ +GE I+ +
Sbjct: 79 IDREILETILDKSTSKAIWESMKKKYQGSTKVKRAQLQALRKEFELLAMKEGEK-IDTFL 137
Query: 1436 NKVKSLCRXXXXXXXXXXXXXXRMRRIIIHGLRPEFRSFIAAIQGWPEQPSLINLENLLA 1615
+ ++ + I+ L P+F + +I+ S ++++ L
Sbjct: 138 GRTLTVVNKMKTNGEVMEQSTIVSK--ILRSLTPKFNYVVCSIEE-SNDLSTLSIDELHG 194
Query: 1616 DQEALTKQMLGVSLKKEEEALFSYKKKGRFPRQNNXXXXXXXFIEGSQTRGAQENRDERG 1795
+ +Q L +++E+ +++++ P Q GS+ RG RG
Sbjct: 195 SL-LVHEQRLNGHVQEEQALKVTHEER---PSQGRGRGV----FRGSRGRG-------RG 239
Query: 1796 QLSNRYRRPNGSCFVCGKRGHYARDCRFRKKQAEGNMATSNEQEKYNSEEEWDAEASIAV 1975
+ + R C+ C GH+ +C EW+ A+ A
Sbjct: 240 RGRSGTNRAIVECYKCHNLGHFQYEC-----------------------PEWEKNANYAE 276
Query: 1976 IEQTHEEVCSSSLEEKSALMAVVPGRIDYENDWIVDSGCSNHMTGDKEKLQNTAEYKGGR 2155
+E+ E + + +E+ A + + W +DSGCSNHMTG KE E R
Sbjct: 277 LEEEEELLLMAYVEQNQA---------NRDEVWFLDSGCSNHMTGSKEWFSELEE-GFNR 326
Query: 2156 MVVTANNSRLPITHIGKTVITPRFSPSQVHLQDVYHVPGMKKNLLSVAQLTSSGNYVLFG 2335
V N++R+ + +GK + + + + +VY+VP ++ NLLS+ QL G +L
Sbjct: 327 TVKLGNDTRMSV--VGKGSVKVKVNGVTQVIPEVYYVPELRNNLLSLGQLQERGLAILIR 384
Query: 2336 PKDVKVYQNVK--ISGTPVMEGRRLESIYVMSAESAYVDKTRK--NETTDLWHARLGHVS 2503
KVY K I T + R + +++ +T + ++ LWH R GH++
Sbjct: 385 DGTCKVYHPSKGAIMETNMSGNRMFFLLASKPQKNSLCLQTEEVMDKENHLWHCRFGHLN 444
Query: 2504 YHXXXXXXXXXXXXXXPQLEIRDDMVCAGCQYGKAHQLPY-QESNYRAKQPLELIHSDLF 2680
P L+ + +CA C GK H+ +++++++ L+L+HSD+
Sbjct: 445 QEGLKLLAHKKMVIGLPILKATKE-ICAICLTGKQHRESMSKKTSWKSSTQLQLVHSDIC 503
Query: 2681 GPVKQPSIRGMCYMVTFIDDFSRYVWVXXXXXXXXXXXXXXXXXXXXXXXXXXXIKCLRT 2860
GP+ S G Y+++FIDDF+R WV + CLRT
Sbjct: 504 GPITPISHSGKRYILSFIDDFTRKTWVYFLHEKSEAFATFKIFKASVEKEIGAFLTCLRT 563
Query: 2861 DNGGEYTSGEFSQYLQEHKIHHQLTCPNTPQQNGVAERKNRHLVETCRSMLHAKNVPGRF 3040
D GGE+TS EF ++ + H I QLT TPQQNGVAERKNR ++ RSML + VP F
Sbjct: 564 DRGGEFTSNEFGEFCRSHGISRQLTAAFTPQQNGVAERKNRTIMNAVRSMLSERQVPKMF 623
Query: 3041 *AECMRTAAHVINRLPQPKLGFVSPFEKLWKIKPTVSHFRVFGCVCYVFVPSHLRSKFDK 3220
+E + + H+ NR P + ++P E KP V +FRVFGC+ YV +P RSK D
Sbjct: 624 WSEATKWSVHIQNRSPTAAVEGMTPEEAWSGRKPVVEYFRVFGCIGYVHIPDQKRSKLDD 683
Query: 3221 KAIRCIFVGYDSQRKGWRCCDPTNDLCYTSRNVVFDETSS*-WTPQRVELPD-SKKIGDK 3394
K+ +C+F+G + K WR DP S++VVFDE S W VE + + + GD
Sbjct: 684 KSKKCVFLGVSEESKAWRLYDPVMKKIVISKDVVFDEDKSWDWDQADVEAKEVTLECGD- 742
Query: 3395 LQEEIVEVQKSHEEIENSQESSDEEEPMRTTQGPWQTGVHQPTPEENRPIQQEEVEVPTS 3574
E+ +++S+ EP+ P G + + + P+S
Sbjct: 743 ---------------EDDEKNSEVVEPIAVAS-PNHVG-------SDNNVSSSPILAPSS 779
Query: 3575 PQPQ--LRKSTRQRKPNPKYANAVVEEDESTKE--------------PVTFEEAVQHKEW 3706
P P K TR+R+P A+ E E +E P+ F++AV+ K W
Sbjct: 780 PAPSPVAAKVTRERRPPGWMADYETGEGEEIEENLSVMLLMMMTEADPIQFDDAVKDKIW 839
Query: 3707 RKAMEEEIVALKQNETWDLMPIPDGAKPISCKWVYKVKRRLDGSIERYKSRLVARGFSQQ 3886
R+AME EI ++ +N TW+L +P G PI KWVYK K DG +++YK+RLVA+G++Q
Sbjct: 840 REAMEHEIESIVKNNTWELTTLPKGFTPIGVKWVYKTKLNEDGEVDKYKARLVAKGYAQC 899
Query: 3887 YGLDYDETFSPVAKITTVRMLIALATSKSWKLWQMDVKKAFLHGELDRDIYMEQPKGFEN 4066
YG+DY E F+PVA++ TVR ++A+++ +W+++Q+DVK AFLHGEL ++Y+ QP+GF
Sbjct: 900 YGIDYTEVFAPVARLDTVRTILAISSQFNWEIFQLDVKSAFLHGELKEEVYVRQPEGFIR 959
Query: 4067 KENPGHVCKLKKALYGLKQAPRAWYGKIAEFLVQCGYSVAPADSSLFVKTQHGKLAIVLV 4246
+ V KL+KALYGLKQAPRAWY +I + ++ + P++ +LF KT+ G + IV +
Sbjct: 960 EGEEEKVYKLRKALYGLKQAPRAWYSRIEAYFLKEEFERCPSEHTLFTKTRVGNILIVSL 1019
Query: 4247 YVDDLIVTGDDENEIQRTRTNLSVRFQMKELGELNHFLGLEMDRTKEGIFLCQQKYARDL 4426
YVDDLI TG D+ + ++ + F+M +LG++ HFLG+E+ ++ GIF+CQ++YAR++
Sbjct: 1020 YVDDLIFTGSDKAMCDEFKKSMMLEFEMSDLGKMKHFLGIEVKQSDGGIFICQRRYAREV 1079
Query: 4427 LHKFGMIDCKPISTPIEINSKLC-DEGKDLENATMYRQLVGSLIYLTLTRPDIAYAVGIA 4603
L +FGM + + PI +KL DE + + TM++QLVGSL+YLT+TRPD+ Y V +
Sbjct: 1080 LARFGMDESNAVKNPIVPGTKLTKDENGEKVDETMFKQLVGSLMYLTVTRPDLMYGVCLI 1139
Query: 4604 SRFMEKPKKPHLEVVRQILRYVKGTIDYGLFY--KKNKDCKVVGYCDADYAGCRDTRRST 4777
SRFM P+ H ++ILRY+KGT++ G+FY +KN+ K++ + D+DYAG + RRST
Sbjct: 1140 SRFMSNPRMSHWLAAKRILRYLKGTVELGIFYRRRKNRSLKLMAFTDSDYAGDLNDRRST 1199
Query: 4778 TGYVFSLGSAAVSWCSKRQPTVSLSTXXXXXXXXXXXXXXSTWLMQLMADLYQPVSYATQ 4957
+G+VF + S A+ W SK+QP V+LST WL +++ L AT
Sbjct: 1200 SGFVFLMASGAICWASKKQPVVALSTTEAEYIAAAFCACQCVWLRKVLEKLGAEEKSATV 1259
Query: 4958 LYCDNQSAIRIAENPVCHARTKHVEVHYHFVREKVLKGEIDLKHINTEEQVADVLTKGLS 5137
+ CDN S I+++++PV H ++KH+EV +H++R+ V + L++ TE+QVAD+ TK L
Sbjct: 1260 INCDNSSTIQLSKHPVLHGKSKHIEVRFHYLRDLVNGDVVKLEYCPTEDQVADIFTKPLK 1319
Query: 5138 ASKFEGFRTQLGIMRRKELN 5197
+FE R LG++ E++
Sbjct: 1320 LEQFEKLRALLGMVNMSEVS 1339
>dbj|BAB01972.1| copia-like retrotransposable element [Arabidopsis thaliana]
Length = 1499
Score = 745 bits (1923), Expect = 0.0
Identities = 473/1393 (33%), Positives = 745/1393 (53%), Gaps = 38/1393 (2%)
Frame = +2
Query: 1103 NNQNYTTWQTCMESYLQGQDLWDVV--GGSKVTPPEDAGALKKWK----IKAGKTMFAIK 1264
N ++Y W+ M + L+ + LWDV+ G + + PE + AL + + +K + ++
Sbjct: 13 NGESYGFWKIKMITILKTRKLWDVIENGVTSNSSPETSPALTRERDDQVMKDMMALQILQ 72
Query: 1265 TTIDEELLEYIRDKNTPKEAWDTFAALFSKKNDLRLQFL-----ENELLSITQGEMTINQ 1429
+ + + + I ++ EAW+ F + +++ L E E L + +GE TIN
Sbjct: 73 SAVSDSIFPRIAPASSATEAWNALEMEFQGSSQVKMINLQTLRREYENLKMEEGE-TIND 131
Query: 1430 YFNKVKSLCRXXXXXXXXXXXXXXRMRRIIIHGLRPEFRSFIAAIQGWPEQPSLINLENL 1609
+ K+ +L +++I+I + +F S + ++ + S +++ L
Sbjct: 132 FTTKLINLSNQLRVHGEEKSDYQV-VQKILI-SVPQQFDSIVGVLE-QTKDLSTLSVTEL 188
Query: 1610 LADQEALTKQMLGVSLKKEEEALFSYKKKGR--FPRQNNXXXXXXXFIEGSQTRGAQENR 1783
+ +A ++ L + + E F+ +K G +QN G R
Sbjct: 189 IGTLKA-HERRLNLREDRINEGAFNGEKLGSRGENKQNKIRHGKTNMWCGVCKRNNHNEV 247
Query: 1784 DERGQLSNRYRRPNGS----CFVCGKRGHYARDCRFRKKQAEGNMATSNEQEKYNSEEEW 1951
D + S + GS C+VC K+GH ARDC+ RK G A + +E SE+E
Sbjct: 248 DCFRKKSESISQRGGSYERRCYVCDKQGHIARDCKLRK----GERAHLSIEE---SEDEK 300
Query: 1952 DAEASIAVIEQTHEEVCSSSLEEKSALMAVVPGRIDYENDWIVDSGCSNHMTGDKEKLQN 2131
+ E + S++EEK E W+VDSGC+NHM+ D
Sbjct: 301 EDEC----------HMLFSAVEEKEISTI-------GEETWLVDSGCTNHMSKDVRHF-- 341
Query: 2132 TAEYKGGRMVVTANNSRLPITHIGKTVITPRFSPSQVHLQDVYHVPGMKKNLLSVAQLTS 2311
A + ++++ N ++ GK I + ++DV +VP + +NLLSV+Q+ S
Sbjct: 342 IALDRSKKIIIRIGNGGKVVSE-GKGDIRVSTNKGDHVIKDVLYVPELARNLLSVSQMIS 400
Query: 2312 SGNYVLFGPKDVK-VYQNVKISGTPV----MEGRRLESIYVMSAESAYVDKTRKNETTDL 2476
+G V+F +D K V Q++K G + M+ R I+ S E Y+ K E TDL
Sbjct: 401 NGYRVIF--EDNKCVIQDLK--GRKILDIKMKDRSFPIIWKKSREETYMAFEEKEEQTDL 456
Query: 2477 WHARLGHVSYHXXXXXXXXXXXXXXPQLEIRDDMVCAGCQYGKAHQLPY-QESNYRAKQP 2653
WH R GHV+Y P+ E+ +CA C+ GK + + ++S +
Sbjct: 457 WHKRFGHVNYDKIETMQTLKIVEKLPKFEVIKG-ICAACEMGKQSRRSFPKKSQSNTNKT 515
Query: 2654 LELIHSDLFGPVKQPSIRGMCYMVTFIDDFSRYVWVXXXXXXXXXXXXXXXXXXXXXXXX 2833
LELIHSD+ GP++ SI G Y +TFIDDFSR WV
Sbjct: 516 LELIHSDVCGPMQTESINGSRYFLTFIDDFSRMTWVYFLKNKSEVITKFKIFKPYVENQS 575
Query: 2834 XXXIKCLRTDNGGEYTSGEFSQYLQEHKIHHQLTCPNTPQQNGVAERKNRHLVETCRSML 3013
IK LRTD GGE+ S EF + QE IHH++T P +PQQNGVAER+NR LVE RSM+
Sbjct: 576 ESRIKRLRTDGGGEFLSREFIKLCQESGIHHEITTPYSPQQNGVAERRNRTLVEMARSMI 635
Query: 3014 HAKNVPGRF*AECMRTAAHVINRLPQPKL-GFVSPFEKLWKIKPTVSHFRVFGCVCYVFV 3190
K + +F AE + T+ ++ NRLP L V+P E KP+V H +VFGCVCY+ +
Sbjct: 636 EEKKLSNKFWAEAIATSTYLQNRLPSKSLEKGVTPMEIWSGKKPSVDHLKVFGCVCYIHI 695
Query: 3191 PSHLRSKFDKKAIRCIFVGYDSQRKGWRCCDPTNDLCYTSRNVVFDETSS*WT----PQR 3358
P R K D KA + IFVGY ++ KG+R + S++V FDE + W+ +R
Sbjct: 696 PDEKRRKLDTKAKQGIFVGYSNESKGYRVFLLNEEKIEVSKDVTFDEKKT-WSHDEKGER 754
Query: 3359 VELPDSKKI-------GDKLQEEIVEVQKSHEEIENSQESSDEEEPMRTTQGPWQTGVHQ 3517
+ KI G+ L I +V + ++ S GV
Sbjct: 755 KAILSLVKINSQEQGGGNDLNAHIDQVSNAFNQLHISSR-----------------GVQN 797
Query: 3518 PTPEENRPIQQEEVEVPTSPQPQLRKSTRQRKPNPKYANAVVEED--ESTKEPVTFEEAV 3691
EE E P+ + + N A++ E +EP EEA+
Sbjct: 798 ---------SHEEGEESVGPRGFRSINNLMDQTNEVEGEALIHEMCLMMAEEPQALEEAM 848
Query: 3692 QHKEWRKAMEEEIVALKQNETWDLMPIPDGAKPISCKWVYKVKRRLDGSIERYKSRLVAR 3871
+ ++W +AM EE+ +++N+TW+++ P IS KW++++K G + K+RLVAR
Sbjct: 849 KDEKWIEAMREELRMIEKNKTWEVVARPKDKNVISVKWIFRLKTDASGEAIKRKARLVAR 908
Query: 3872 GFSQQYGLDYDETFSPVAKITTVRMLIALATSKSWKLWQMDVKKAFLHGELDRDIYMEQP 4051
GF+Q+YG+DY ETF+PV++ T+R ++A+A + WKL+QMDVK AFL+G+L+ ++Y+EQP
Sbjct: 909 GFTQEYGVDYLETFAPVSRYDTIRTIMAIAAQQGWKLFQMDVKSAFLNGDLEEEVYIEQP 968
Query: 4052 KGFENKENPGHVCKLKKALYGLKQAPRAWYGKIAEFLVQCGYSVAPADSSLFVKTQHGKL 4231
GF ++ G V KL KALYGLKQAPRAWYG+I + ++ G+ + D++ +VK ++
Sbjct: 969 PGFIEEKEEGKVLKLHKALYGLKQAPRAWYGRIDGYFIKNGFERSINDAAFYVKKTSKEI 1028
Query: 4232 AIVLVYVDDLIVTGDDENEIQRTRTNLSVRFQMKELGELNHFLGLEMDRTKEGIFLCQQK 4411
+V +YVDD+IVTG + EI+R + + F+M +LGEL++FLG+E+++ EGIFL Q+
Sbjct: 1029 LVVSLYVDDIIVTGSNVKEIERFKEEMKNEFEMTDLGELSYFLGMEVNQDDEGIFLSQEN 1088
Query: 4412 YARDLLHKFGMIDCKPISTPIEINSKLCDE-GKDLENATMYRQLVGSLIYLTLTRPDIAY 4588
YA+ LL KFGM +CK +STP+ + K+ + + LE+ TMYR ++G ++YL +RPDI Y
Sbjct: 1089 YAKKLLKKFGMQECKSVSTPLTPHGKIEEVLSEKLEDVTMYRSMIGGMLYLCASRPDIMY 1148
Query: 4589 AVGIASRFMEKPKKPHLEVVRQILRYVKGTIDYGLFYKKNKDCKVVGYCDADYAGCRDTR 4768
A SR+M P K HL+ +++LRYVKGT+ YG+ +K+ + ++VG+ D+D+AG + +
Sbjct: 1149 ASSYLSRYMRSPLKQHLQEAKRVLRYVKGTLTYGIHFKRVEKPELVGFSDSDWAGSVEDK 1208
Query: 4769 RSTTGYVFSLGSAAVSWCSKRQPTVSLSTXXXXXXXXXXXXXXSTWLMQLMADLYQPVSY 4948
+ST+GYVF++GS A W S +Q TV+ ST + WL +L+ ++
Sbjct: 1209 KSTSGYVFTIGSGAFCWNSSKQKTVAQSTAEAEYIAVCSAANQAIWLQRLVNEIGFKAEK 1268
Query: 4949 ATQLYCDNQSAIRIAENPVCHARTKHVEVHYHFVREKVLKGEIDLKHINTEEQVADVLTK 5128
+++CDN+SAI I +NPV H RTKH+++ YHFVRE G+I L++ E Q+AD+LTK
Sbjct: 1269 GIRIFCDNKSAIAIGKNPVQHRRTKHIDIKYHFVREAQQNGKIKLEYCPGELQIADILTK 1328
Query: 5129 GLSASKFEGFRTQ 5167
L+ ++ R +
Sbjct: 1329 PLNTTRRRRHRAE 1341
>emb|CAN60238.1| hypothetical protein VITISV_032906 [Vitis vinifera]
Length = 1430
Score = 740 bits (1911), Expect = 0.0
Identities = 467/1375 (33%), Positives = 724/1375 (52%), Gaps = 21/1375 (1%)
Frame = +2
Query: 1115 YTTWQTCMESYLQGQDLWDVVGGSKVTPPEDAGALKKWKIKAGKTMFAIKTTIDEELLEY 1294
Y W M++ + QDLWD+V P E+A LK+ K K +F I+ I E +
Sbjct: 138 YEFWSIKMKTLFKSQDLWDLVENGYPYPDEEA-RLKENTKKDSKALFFIQQAIHESIFSK 196
Query: 1295 IRDKNTPKEAWDTFAALF---SKKNDLRLQFLEN--ELLSITQGEMTINQYFNKVKSLCR 1459
I T KEAW T F SK ++LQ L E L + GE + + ++V ++
Sbjct: 197 IAVATTAKEAWTTLETAFQGSSKVITVKLQSLRRDFETLHMKNGE-SXQDFLSRVAAIVN 255
Query: 1460 XXXXXXXXXXXXXXRMRRIIIHGLRPEFRSFIAAIQGWPEQPSLINLENLLADQEALTKQ 1639
+ ++ L P+F +A I+ + S + + L+ ++ +
Sbjct: 256 QMRSYGEDILDQTVVAK--VLRSLTPKFDHVVAXIEE-SKDLSTYSFDELMGSLQSHEVR 312
Query: 1640 MLGVSLKKEEEALF-----SYKKKGRFPRQNNXXXXXXXFIEGSQTRGAQENRDERGQLS 1804
+ K EE+ + S K G G + RG + + ++ Q +
Sbjct: 313 LSXTEDKNEEKXFYTKGETSDXKNGGREXTGRGRGRGGAHGRGGRGRGRGDAQGDQRQST 372
Query: 1805 NRYR-RPNGSCFVCGKRGHYARDCRFRKKQAEGNMATSNEQEKYNSEEEWDAEASIAVIE 1981
+ R + N C+ C + GH +C +++Q +Q Y +EE + +A
Sbjct: 373 EKSRNKSNIXCYYCKRFGHVQAECWKKERQ--------EKQANYVEQEEDQVKLFMAY-- 422
Query: 1982 QTHEEVCSSSLEEKSALMAVVPGRIDYENDWIVDSGCSNHMTGDKEKLQNTAEYKGGRMV 2161
+EEV SS+ N W +DSGCSNHMTG K + E V
Sbjct: 423 --NEEVVSSN------------------NIWFLDSGCSNHMTGIKSLFKELDE-SHKLXV 461
Query: 2162 VTANNSRLPITHIGKTVITPRFSPSQVHLQDVYHVPGMKKNLLSVAQLTSSGNYVLFGPK 2341
++ ++ + G + ++ L +VY +P + + L+ + K
Sbjct: 462 KLGDDXQVQVEGKGTVAVNNGHGNVKL-LYNVYFIPSLTEKLVKCG--------ATYDKK 512
Query: 2342 DVKVYQNVKISGTPVMEGRRLESIYVMSAESAYVDKTRKNETTDLWHARLGHVSYHXXXX 2521
++ +V+ M +L + V S E + ++ ++LWH R GH++
Sbjct: 513 SDQIIVDVR------MAANKLFPLEVSSIEK-HALVVKETSESNLWHLRYGHLNVKGLKL 565
Query: 2522 XXXXXXXXXXPQLEIRDDMVCAGCQYGKAHQLPYQES-NYRAKQPLELIHSDLFGPVKQP 2698
P+++ + VC GC YGK + P+ + + RA LE+IH+DL GP++
Sbjct: 566 LSKKEMVFELPKIDSVN--VCEGCIYGKQSKKPFPKGRSRRASSCLEIIHADLCGPMQTA 623
Query: 2699 SIRGMCYMVTFIDDFSRYVWVXXXXXXXXXXXXXXXXXXXXXXXXXXXIKCLRTDNGGEY 2878
S G Y + F DD SR WV IK LRTD GE+
Sbjct: 624 SFGGSRYFLLFTDDHSRMSWVYFLQSKAETFETFKKFKAFVEKQSGKCIKVLRTDRXGEF 683
Query: 2879 TSGEFSQYLQEHKIHHQLTCPNTPQQNGVAERKNRHLVETCRSMLHAKNVPGRF*AECMR 3058
S +F + +E +H +LT P +P+QNGVAERKNR +VE RSM+ AKN+ F AE +
Sbjct: 684 LSNDFKVFCEEEGLHRELTTPYSPEQNGVAERKNRTVVEMARSMMXAKNLSNHFWAEGVA 743
Query: 3059 TAAHVINRLPQPKLGFVSPFEKLWKIKPTVSHFRVFGCVCYVFVPSHLRSKFDKKAIRCI 3238
TA +++N P + +P+E + KP VSH +VFG V Y SH RSK D+K+++CI
Sbjct: 744 TAVYLLNISPTKAVLNRTPYEAWYGRKPWVSHLKVFGSVAYTLXBSHNRSKLDEKSVKCI 803
Query: 3239 FVGYDSQRKGWRCCDPTNDLCYTSRNVVFDETSS*-WTPQRVELPDSKKIGDKLQEEIVE 3415
F+GY SQ KG++ +P + SRNVVFDE +S W ++ E+
Sbjct: 804 FIGYCSQSKGYKLYNPVSGKIIVSRNVVFDEKASXTW---------------RVSEDGAL 848
Query: 3416 VQKSHEEIENSQESSDEEEPMRTTQGPWQTGVHQPTPEENRPIQQEEVEVPTSPQPQLRK 3595
V EI + E + E+ + Q P PTP + P+SP
Sbjct: 849 V-----EISSESEMAQSEDQQPSVQIPXS-----PTPSHS----------PSSPNLSXSS 888
Query: 3596 STRQRKPNP-KYANAVVEEDESTK-----EPVTFEEAVQHKEWRKAMEEEIVALKQNETW 3757
S++ + P + ++ + E+T+ +P TFEEAV+ +EW AM+EEI A+++NETW
Sbjct: 889 SSQSSEETPPRKFRSLRDIYETTQVLFVADPTTFEEAVEKEEWCSAMKEEIAAIEKNETW 948
Query: 3758 DLMPIPDGAKPISCKWVYKVKRRLDGSIERYKSRLVARGFSQQYGLDYDETFSPVAKITT 3937
+L+ +P+ I KWV++ K DGSI+++K+RLVA+G++QQ+G+DYD+TFSPVA+ T
Sbjct: 949 ELVELPEDKNVIGVKWVFRTKYLADGSIQKHKARLVAKGYAQQHGVDYDDTFSPVARFET 1008
Query: 3938 VRMLIALATSKSWKLWQMDVKKAFLHGELDRDIYMEQPKGFENKENPGHVCKLKKALYGL 4117
VR L+ALA W ++Q DVK AFL+GEL ++Y QP+GF + HV +LK ALYGL
Sbjct: 1009 VRTLLALAAHMHWCVYQFDVKSAFLNGELVEEVYXSQPEGFIVPDKEEHVYRLKXALYGL 1068
Query: 4118 KQAPRAWYGKIAEFLVQCGYSVAPADSSLFVKTQ-HGKLAIVLVYVDDLIVTGDDENEIQ 4294
KQAPRAWY KI + V+ G+ + ++ +L++K Q L I+ +YVDD+I G + I
Sbjct: 1069 KQAPRAWYSKIDSYFVENGFEKSKSEPNLYLKRQGKNDLLIICLYVDDMIYMGSSSSLIN 1128
Query: 4295 RTRTNLSVRFQMKELGELNHFLGLEMDRTKEGIFLCQQKYARDLLHKFGMIDCKPISTPI 4474
+ + +F+M +LG L+ FLGLE+ + ++G+F+ Q+KYA DLL KF M++CK ++ P+
Sbjct: 1129 EFKACMKKKFEMSDLGLLHFFLGLEVKQVEDGVFVSQRKYAVDLLKKFNMLNCKVVAIPM 1188
Query: 4475 EINSKL-CDEGKDLENATMYRQLVGSLIYLTLTRPDIAYAVGIASRFMEKPKKPHLEVVR 4651
N KL ++G + +A +R LVG LIYLT TRPDIA+AVG+ SRFM P K HL +
Sbjct: 1189 NSNEKLQAEDGTERADARRFRSLVGGLIYLTHTRPDIAFAVGVISRFMHCPSKQHLGATK 1248
Query: 4652 QILRYVKGTIDYGLFYKKNKDCKVVGYCDADYAGCRDTRRSTTGYVFSLGSAAVSWCSKR 4831
++LRY+ GT D+ ++ ++ K+VGY D+D+AGC + R+ST+GY+FSLGSA
Sbjct: 1249 RLLRYIAGTYDFRIWXGHVQEFKLVGYTDSDWAGCLEDRKSTSGYMFSLGSA-------- 1300
Query: 4832 QPTVSLSTXXXXXXXXXXXXXXSTWLMQLMADLYQPVSYATQLYCDNQSAIRIAENPVCH 5011
+ TV+ S+ + WL +++AD+ Q T +YCDN++AI + +NP H
Sbjct: 1301 EYTVATSS-----------ACQAVWLRRILADINQEHEEPTVIYCDNKAAIAMTKNPAYH 1349
Query: 5012 ARTKHVEVHYHFVREKVLKGEIDLKHINTEEQVADVLTKGLSASKFEGFRTQLGI 5176
RTKHV++ HF+R+ V++G++ L++ NT EQVADVLTK LS K FR++LG+
Sbjct: 1350 GRTKHVDIRVHFIRDLVVEGKVVLQYCNTNEQVADVLTKALSRDKHVYFRSKLGV 1404
Score = 102 bits (254), Expect = 4e-18
Identities = 56/179 (31%), Positives = 91/179 (50%), Gaps = 6/179 (3%)
Frame = +2
Query: 4613 MEKPKKPHLEVVRQILRYVKGTIDYGLFYKKNKDCKVVGYCDADYAGCRDTRRSTTGYVF 4792
M K HL ++LRY+ GT D+ ++Y ++ K+VGY D+D+AG
Sbjct: 1 MHCSSKQHLGAAXRLLRYIAGTYDFRIWYGHVQEFKLVGYTDSDWAGX------------ 48
Query: 4793 SLGSAAVSWCSKRQPTVSLSTXXXXXXXXXXXXXXSTWLMQLMADLYQPVSYATQLYCDN 4972
V W SK+Q LS+ + WL +++ D+ Q T +YCDN
Sbjct: 49 ------VCWXSKKQAVTXLSSSEAEYTAXTSSACQAVWLRRILXDINQEHEEXTVIYCDN 102
Query: 4973 QSAIRIAENPVCHARTKHVEVHYHFVREKVLKGE------IDLKHINTEEQVADVLTKG 5131
++AI + +NP H RTKHV++ HF+R+ V++GE I +K + + + D++ G
Sbjct: 103 KAAIAMTKNPAYHGRTKHVDIRVHFIRDLVVEGECYEFWSIKMKTLFKSQDLWDLVENG 161
>gb|AAP46257.1| putative polyprotein [Oryza sativa Japonica Group]
gi|108711922|gb|ABF99717.1| retrotransposon protein,
putative, unclassified [Oryza sativa Japonica Group]
Length = 1335
Score = 739 bits (1907), Expect = 0.0
Identities = 463/1403 (33%), Positives = 715/1403 (50%), Gaps = 44/1403 (3%)
Frame = +2
Query: 1109 QNYTTWQTCMESYLQGQDLWDVV-------GGSKVTPPEDAGALKKWKIKAGKTMFAIKT 1267
+NY W M + L Q LWD+V + E +L + ++ K +F I+
Sbjct: 12 ENYDIWSIKMRTLLLSQGLWDIVENGYQEYSAGETLTAEQKKSLAEDRMSDAKALFLIQQ 71
Query: 1268 TIDEELLEYIRDKNTPKEAWDTFAALFS---KKNDLRLQFLENELLSITQGEMT-INQYF 1435
+ E L I KEAWD F K ++LQ L + ++ E + YF
Sbjct: 72 GVAESLFPRIIGAKKSKEAWDKLKEEFQGSQKVLAVKLQTLRRQFQNLLMKESEKVKDYF 131
Query: 1436 NKVKSLCRXXXXXXXXXXXXXXRMRRIIIHGLRPEFRSFIAAIQGWPEQPSLINLENLLA 1615
++V + + +I+I PE +I A + S +LE+
Sbjct: 132 SRVIEIVNQMRLYGEDINDQKV-VEKILIS--LPEKYEYIVAATEESKDLSKDSLES--- 185
Query: 1616 DQEALTKQMLGVSLKKEEEALFSYK----------KKGRFPRQNNXXXXXXXFIEGSQTR 1765
E Q G S++ ++ S++ +K FP ++ F Q
Sbjct: 186 -HEERKLQREGSSIENAFQSKLSFRPQNSRFRGNFQKNGFPMRDRGYFQKNGF--SRQKE 242
Query: 1766 GAQENRDERGQLSNRYRR-------------PNGSCFVCGKRGHYARDCRFRKKQAEGNM 1906
QE R++ SN + +C C ++GH A+ CR R E N
Sbjct: 243 DGQERREKGTSSSNLWCDICQKSSHTTDMCWKKMTCNKCKRKGHIAKYCRTR----EINR 298
Query: 1907 ATSNEQEKYNSEEEWDAEASIAVIEQTHEEVCSSSLEEKSALMAVVPGRIDYENDWIVDS 2086
A + QEK SEE + C ++ EEK ++ W++DS
Sbjct: 299 ANFS-QEKEKSEEMVFS--------------CHTAQEEK-------------DDVWVIDS 330
Query: 2087 GCSNHMTGDKEKLQNTAEYKGGRMVVTANNSRLPITHIGKTVITPRFSPSQVHLQDVYHV 2266
GC+NHM D + + + N + + GK + + + ++DV V
Sbjct: 331 GCTNHMAADPNLFREMDSSYHAK--IHMGNGSIAQSE-GKGTVAVQTADGPKFIKDVLLV 387
Query: 2267 PGMKKNLLSVAQLTSSGNYVLFGPKDVKVY--QNVKISGTPVMEGRRLESIYVMSAESAY 2440
P +K+NLLS+ QL G V F K+ +N ++ ME R + + +
Sbjct: 388 PDLKQNLLSIGQLLEHGYAVYFEDFSCKILDRKNNRLVAKINMEKNR--NFLLRMNHTTQ 445
Query: 2441 VDKTRKNETTDLWHARLGHVSYHXXXXXXXXXXXXXXPQLEIRDDMVCAGCQYGKAHQLP 2620
+ + + +DLWH R+GH++Y P + ++ D C GC +GK +
Sbjct: 446 MALRSEVDISDLWHKRMGHLNYRALKLLRTKGMVQGLPFITLKSDP-CEGCVFGKQIRAS 504
Query: 2621 YQESN-YRAKQPLELIHSDLFGPVKQPSIRGMCYMVTFIDDFSRYVWVXXXXXXXXXXXX 2797
+ S +RA PLEL+H+D+ G V S G Y +TFIDD++R +WV
Sbjct: 505 FPHSGAWRASAPLELVHADIVGKVPTISEGGNWYFITFIDDYTRMIWVYFLKEKSAALEI 564
Query: 2798 XXXXXXXXXXXXXXXIKCLRTDNGGEYTSGEFSQYLQEHKIHHQLTCPNTPQQNGVAERK 2977
IK LR+D G EY S EF +Y + I QLT + QQNGVAERK
Sbjct: 565 FKKFKAMVENQSNRKIKVLRSDQGREYISKEFEKYCENAGIRRQLTAGYSAQQNGVAERK 624
Query: 2978 NRHLVETCRSMLHAKNVPGRF*AECMRTAAHVINRLPQPKLGFVSPFEKLWKIKPTVSHF 3157
NR + + SML K +P F AE + TA +++NR P + +PFE + KP + H
Sbjct: 625 NRTINDMANSMLQDKGMPKSFWAEAVNTAVYILNRSPTKAVTNRTPFEAWYGKKPVIGHM 684
Query: 3158 RVFGCVCYVFVPSHLRSKFDKKAIRCIFVGYDSQRKGWRCCDPTNDLCYTSRNVVFDETS 3337
RVFGC+CY VP+ R KFD K+ RCIFVGY KG+R + SR+ +FDE++
Sbjct: 685 RVFGCICYAQVPAQKRVKFDNKSDRCIFVGYADGIKGYRLYNLEKKKIIISRDAIFDESA 744
Query: 3338 S*WTPQRVELPDSKKIGDKLQEEIVEVQKSH----EEIENSQESSDEEEPMRTTQGPWQT 3505
+ W + E + L + + + H E+E+ S PM ++
Sbjct: 745 T-WNWKSPEASSTPL----LPTTTITLGQPHMHGTHEVEDHTPSPQPSSPMSSSSAS--- 796
Query: 3506 GVHQPTPEENRPIQQEEVEVPTSPQPQLRKSTRQRKPNPKYANAVVEE--DESTKEPVTF 3679
++ P +E++ P S ++R + + + E + S EP +F
Sbjct: 797 -------SDSSPSSEEQISTPESAPRRVRSMVELLESTSQQRGSEQHEFCNYSVVEPQSF 849
Query: 3680 EEAVQHKEWRKAMEEEIVALKQNETWDLMPIPDGAKPISCKWVYKVKRRLDGSIERYKSR 3859
+EA +H W KAME+EI +++N TW+L+ P + I KWVYK K DGS+++YK+R
Sbjct: 850 QEAEKHDNWIKAMEDEIHMIEKNNTWELVDRPRDREVIGVKWVYKTKLNPDGSVQKYKAR 909
Query: 3860 LVARGFSQQYGLDYDETFSPVAKITTVRMLIALATSKSWKLWQMDVKKAFLHGELDRDIY 4039
LVA+GF Q+ G+DY ET++PVA++ T+R +IALA K WK++Q+DVK AFL+G LD +IY
Sbjct: 910 LVAKGFKQKPGIDYYETYAPVARLETIRTIIALAAQKRWKIYQLDVKSAFLNGYLDEEIY 969
Query: 4040 MEQPKGFENKENPGHVCKLKKALYGLKQAPRAWYGKIAEFLVQCGYSVAPADSSLFVKTQ 4219
+EQP+GF + V +LKKALYGLKQAPRAWY +I ++ +Q G++ + ++ +L+V
Sbjct: 970 VEQPEGFSVQGGENKVFRLKKALYGLKQAPRAWYSQIDKYFIQKGFAKSISEPTLYVNKT 1029
Query: 4220 HGKLAIVLVYVDDLIVTGDDENEIQRTRTNLSVRFQMKELGELNHFLGLEMDRTKEGIFL 4399
+ IV +YVDDLI TG+ E +Q + ++ ++M +LG L++FLG+E+ ++ EGIF+
Sbjct: 1030 GTDILIVSLYVDDLIYTGNSEKMMQDFKKDMMHTYEMSDLGLLHYFLGMEVHQSDEGIFI 1089
Query: 4400 CQQKYARDLLHKFGMIDCKPISTPIEINSK-LCDEGKDLENATMYRQLVGSLIYLTLTRP 4576
Q+KYA ++L KF M +CK ++TP+ N K +G D + T+YR LVGSL+YLT TRP
Sbjct: 1090 SQRKYAENILKKFKMDNCKSVTTPLLPNEKQKARDGADKADPTIYRSLVGSLLYLTATRP 1149
Query: 4577 DIAYAVGIASRFMEKPKKPHLEVVRQILRYVKGTIDYGLFYKKNKDCKVVGYCDADYAGC 4756
DI +A + SR+M P + + +++LRY+KGT DYG++YK K+ K++GY D+D+AGC
Sbjct: 1150 DIMFAASLLSRYMSSPSQLNFTAAKRVLRYIKGTADYGIWYKPVKESKLIGYTDSDWAGC 1209
Query: 4757 RDTRRSTTGYVFSLGSAAVSWCSKRQPTVSLSTXXXXXXXXXXXXXXSTWLMQLMADLYQ 4936
D +ST+GY FSLGSA + + + + WL ++M DL +
Sbjct: 1210 LDDMKSTSGYAFSLGSAEAEYVAASKAVSQV-----------------VWLRRIMEDLGE 1252
Query: 4937 PVSYATQLYCDNQSAIRIAENPVCHARTKHVEVHYHFVREKVLKGEIDLKHINTEEQVAD 5116
T +YCD++SAI I+ENPV H RTKH+ + YH++RE V + E+ L+ T+EQ+AD
Sbjct: 1253 KQYQPTTIYCDSKSAIAISENPVSHDRTKHIAIKYHYIREAVDRQEVKLEFCRTDEQLAD 1312
Query: 5117 VLTKGLSASKFEGFRTQLGIMRR 5185
+ TK LS KF R +G+ ++
Sbjct: 1313 IFTKALSKEKFVRDRELIGVCKK 1335
>dbj|BAB11200.1| copia-type polyprotein [Arabidopsis thaliana]
gi|13872710|emb|CAC37622.1| polyprotein [Arabidopsis
thaliana]
Length = 1334
Score = 737 bits (1902), Expect = 0.0
Identities = 466/1403 (33%), Positives = 717/1403 (51%), Gaps = 43/1403 (3%)
Frame = +2
Query: 1112 NYTTWQTCMESYLQGQDLWDVVGGSKVTPPEDA---GA----LKKWKIKAGKTMFAIKTT 1270
+Y W ME+ ++ ++ WD++ P + GA L + +K K + +
Sbjct: 15 DYEHWAMLMENLIRSKEWWDIIETGIPRPERNVILTGAQRTELAEKTVKDHKVKNYLFAS 74
Query: 1271 IDEELLEYIRDKNTPKEAWDTFAALFSKKNDLRLQFLEN-----ELLSITQGEMTINQYF 1435
ID+ +L+ I K T K+ W++ + + ++ L+ E+L + GE TI YF
Sbjct: 75 IDKTILKTILQKETSKDLWESMKRKYQGNDRVQSAQLQRLRRSFEVLEMKIGE-TITGYF 133
Query: 1436 NKVKSLCRXXXXXXXXXXXXXXRMRRIIIHGLRPEFRSFIAAIQGWPEQPSLINLENLLA 1615
++V + ++ I+ L +F + AI+ N++ L
Sbjct: 134 SRVMEITNDMRNLGEDMPDS--KVVEKILRTLVEKFTYVVCAIE------ESNNIKELTV 185
Query: 1616 D--QEALTKQMLGVSLKKEEEALFSYKKKGRFPRQNNXXXXXXXFIEGSQTRGAQENRDE 1789
D Q +L +S EE + + + R +G + RG +R
Sbjct: 186 DGLQSSLMVHEQNLSRHDVEERVLKAETQWR--------------PDGGRGRGGSPSRGR 231
Query: 1790 -RGQLSNRYR----RPNGSCFVCGKRGHYARDCRFRKKQAEGNMATSNEQEKYNSEEEWD 1954
RG R R R CF C K GHY +C W+
Sbjct: 232 GRGGYQGRGRGYVNRDTVECFKCHKMGHYKAEC-----------------------PSWE 268
Query: 1955 AEASIAVIEQTHEEVCSSSLEEKSALMAVVPGRIDYEND-WIVDSGCSNHMTGDKEK-LQ 2128
EA+ +EE LMA V D E W +DSGCSNHM G +E L+
Sbjct: 269 KEANYV------------EMEEDLLLMAHVEQIGDEEKQIWFLDSGCSNHMCGTREWFLE 316
Query: 2129 NTAEYKGGRMVVTANNSRLPITHIGKTVITPRFSPSQVHLQDVYHVPGMKKNLLSVAQLT 2308
+ +K + V ++ R+ + GK + QV + DVY VPG+K NL SV QL
Sbjct: 317 LDSGFK--QNVRLGDDRRMAVEGKGKLRLEVD-GRIQV-ISDVYFVPGLKNNLFSVGQLQ 372
Query: 2309 SSGNYVLFGPKDVKVYQNV--KISGTPVMEGRRLESIYVMSAESAYVDKTRK----NETT 2470
G + +V+ ++ M R+ ++ +S ++TR +
Sbjct: 373 QKGLRFIIEGDVCEVWHKTEKRMVMHSTMTKNRMFVVFAAVKKSKETEETRCLQVIGKAN 432
Query: 2471 DLWHARLGHVSYHXXXXXXXXXXXXXXPQLEI-RDDMVCAGCQYGKA--HQLPYQESNYR 2641
++WH R GH+++ P+ ++ ++ VC C GK +P +ES ++
Sbjct: 433 NMWHKRFGHLNHQGLRSLAEKEMVKGLPKFDLGEEEAVCDICLKGKQIRESIP-KESAWK 491
Query: 2642 AKQPLELIHSDLFGPVKQPSIRGMCYMVTFIDDFSRYVWVXXXXXXXXXXXXXXXXXXXX 2821
+ Q L+L+H+D+ GP+ S G Y++ FIDDFSR W
Sbjct: 492 STQVLQLVHTDICGPINPASTSGKRYILNFIDDFSRKCWTYLLSEKSETFQFFKEFKAEV 551
Query: 2822 XXXXXXXIKCLRTDNGGEYTSGEFSQYLQEHKIHHQLTCPNTPQQNGVAERKNRHLVETC 3001
+ CLR+D GGEY S EF +Y +E I QLT TPQQNGVAERKNR ++
Sbjct: 552 ERESGKKLVCLRSDRGGEYNSREFDEYCKEFGIKRQLTAAYTPQQNGVAERKNRSVMNMT 611
Query: 3002 RSMLHAKNVPGRF*AECMRTAAHVINRLPQPKLGFVSPFEKLWKIKPTVSHFRVFGCVCY 3181
R ML +VP +F E ++ A +++NR P L ++P EK KP+V H R+FG + Y
Sbjct: 612 RCMLMEMSVPRKFWPEAVQYAVYILNRSPSKALNDITPEEKWSSWKPSVEHLRIFGSLAY 671
Query: 3182 VFVPSHLRSKFDKKAIRCIFVGYDSQRKGWRCCDPTNDLCYTSRNVVFDETSS*-WTPQR 3358
VP R K D+K+I+C+ G + K +R DP SR+V FDE W +
Sbjct: 672 ALVPYQKRIKLDEKSIKCVMFGVSKESKAYRLYDPATGKILISRDVQFDEERGWEWEDKS 731
Query: 3359 VE--LPDSKKIGDKLQEEIVEVQKSHEEIENSQESSDEEEPMRTTQGPWQTGVHQPTPEE 3532
+E L + EE E+ +H ++ +E+ +EEE + T VHQ P
Sbjct: 732 LEEELVWDNSDHEPAGEEGPEI--NHNGQQDQEETEEEEETVAET-------VHQNLPA- 781
Query: 3533 NRPIQQEEVEVPTSPQPQLRKSTRQRKPNPKYANAVVEEDESTK---------EPVTFEE 3685
V T Q ++ + A ++ +DE + +PV FEE
Sbjct: 782 ----------VGTGGVRQRQQPVWMKDYVVGNARVLITQDEEDEVLALFIGPGDPVCFEE 831
Query: 3686 AVQHKEWRKAMEEEIVALKQNETWDLMPIPDGAKPISCKWVYKVKRRLDGSIERYKSRLV 3865
A Q + WRKAME EI ++++N TW+L+ +P+ AK I KW++K K G ++++K+RLV
Sbjct: 832 AAQLEVWRKAMEAEITSIEENNTWELVELPEEAKVIGLKWIFKTKFNEKGEVDKFKARLV 891
Query: 3866 ARGFSQQYGLDYDETFSPVAKITTVRMLIALATSKSWKLWQMDVKKAFLHGELDRDIYME 4045
A+G+ Q+YG+D+ E F+PVAK T+R+++ LA K W ++Q+DVK AFLHG+L D+++E
Sbjct: 892 AKGYHQRYGVDFYEVFAPVAKWDTIRLILGLAAEKGWSVFQLDVKSAFLHGDLKEDVFVE 951
Query: 4046 QPKGFENKENPGHVCKLKKALYGLKQAPRAWYGKIAEFLVQCGYSVAPADSSLFVKTQHG 4225
QPKGFE +E V KLKKALYGLKQAPRAWY +I EF + G+ + +LFVK +
Sbjct: 952 QPKGFEVEEESSKVYKLKKALYGLKQAPRAWYSRIEEFFGKEGFEKCYCEHTLFVKKERS 1011
Query: 4226 KLAIVLVYVDDLIVTGDDENEIQRTRTNLSVRFQMKELGELNHFLGLEMDRTKEGIFLCQ 4405
+V VYVDDLI TG I+ + ++ F M +LG++ +FLG+E+ + + GIF+ Q
Sbjct: 1012 DFLVVSVYVDDLIYTGSSMEMIEGFKNSMMEEFAMTDLGKMKYFLGVEVIQDERGIFINQ 1071
Query: 4406 QKYARDLLHKFGMIDCKPISTPIEINSKLCDEGK-DLENATMYRQLVGSLIYLTLTRPDI 4582
+KYA +++ K+GM C + PI KL G D + T ++QL+GSL YLT TRPD+
Sbjct: 1072 RKYAAEIIKKYGMEGCNSVKNPIVPGQKLTKAGAGDAVDPTEFKQLIGSLRYLTTTRPDL 1131
Query: 4583 AYAVGIASRFMEKPKKPHLEVVRQILRYVKGTIDYGLFYKKNKDCKVVGYCDADYAGCRD 4762
++V + SR+ME P + HL V++ILRYV+GT+D G+ Y++ ++VG+ D+DYAG D
Sbjct: 1132 IFSVNLVSRYMESPNEQHLLAVKRILRYVQGTLDLGIQYERGGATELVGFVDSDYAGDVD 1191
Query: 4763 TRRSTTGYVFSLGSAAVSWCSKRQPTVSLSTXXXXXXXXXXXXXXSTWLMQLMADLYQPV 4942
R+ST+GYVF LG A++W SK+QP V+LST + WL ++ ++
Sbjct: 1192 DRKSTSGYVFMLGGGAIAWASKKQPIVTLSTTEAEFVSASYGACQAVWLRNVLEEIGCRQ 1251
Query: 4943 SYATQLYCDNQSAIRIAENPVCHARTKHVEVHYHFVREKVLKGEIDLKHINTEEQVADVL 5122
T ++CDN S I++++NPV H R+KH+ V YHF+RE V +G I L + T +QVAD++
Sbjct: 1252 EGGTLVFCDNSSTIKLSKNPVLHGRSKHIHVRYHFLRELVKEGTIRLDYCTTTDQVADIM 1311
Query: 5123 TKGLSASKFEGFRTQLGIMRRKE 5191
TK + FE R ++G+ RR+E
Sbjct: 1312 TKAVKREVFEELRGRMGVRRREE 1334
>gb|AAG51247.1|AC055769_6 copia-type polyprotein, putative; 28768-32772 [Arabidopsis thaliana]
Length = 1334
Score = 737 bits (1902), Expect = 0.0
Identities = 466/1403 (33%), Positives = 717/1403 (51%), Gaps = 43/1403 (3%)
Frame = +2
Query: 1112 NYTTWQTCMESYLQGQDLWDVVGGSKVTPPEDA---GA----LKKWKIKAGKTMFAIKTT 1270
+Y W ME+ ++ ++ WD++ P + GA L + +K K + +
Sbjct: 15 DYEHWAMLMENLIRSKEWWDIIETGIPRPERNVILTGAQRTELAEKTVKDHKVKNYLFAS 74
Query: 1271 IDEELLEYIRDKNTPKEAWDTFAALFSKKNDLRLQFLEN-----ELLSITQGEMTINQYF 1435
ID+ +L+ I K T K+ W++ + + ++ L+ E+L + GE TI YF
Sbjct: 75 IDKTILKTILQKETSKDLWESMKRKYQGNDRVQSAQLQRLRRSFEVLEMKIGE-TITGYF 133
Query: 1436 NKVKSLCRXXXXXXXXXXXXXXRMRRIIIHGLRPEFRSFIAAIQGWPEQPSLINLENLLA 1615
++V + ++ I+ L +F + AI+ N++ L
Sbjct: 134 SRVMEITNDMRNLGEDMPDS--KVVEKILRTLVEKFTYVVCAIE------ESNNIKELTV 185
Query: 1616 D--QEALTKQMLGVSLKKEEEALFSYKKKGRFPRQNNXXXXXXXFIEGSQTRGAQENRDE 1789
D Q +L +S EE + + + R +G + RG +R
Sbjct: 186 DGLQSSLMVHEQNLSRHDVEERVLKAETQWR--------------PDGGRGRGGSPSRGR 231
Query: 1790 -RGQLSNRYR----RPNGSCFVCGKRGHYARDCRFRKKQAEGNMATSNEQEKYNSEEEWD 1954
RG R R R CF C K GHY +C W+
Sbjct: 232 GRGGYQGRGRGYVNRDTVECFKCHKMGHYKAEC-----------------------PSWE 268
Query: 1955 AEASIAVIEQTHEEVCSSSLEEKSALMAVVPGRIDYEND-WIVDSGCSNHMTGDKEK-LQ 2128
EA+ +EE LMA V D E W +DSGCSNHM G +E L+
Sbjct: 269 KEANYV------------EMEEDLLLMAHVEQIGDEEKQIWFLDSGCSNHMCGTREWFLE 316
Query: 2129 NTAEYKGGRMVVTANNSRLPITHIGKTVITPRFSPSQVHLQDVYHVPGMKKNLLSVAQLT 2308
+ +K + V ++ R+ + GK + QV + DVY VPG+K NL SV QL
Sbjct: 317 LDSGFK--QNVRLGDDRRMAVEGKGKLRLEVD-GRIQV-ISDVYFVPGLKNNLFSVGQLQ 372
Query: 2309 SSGNYVLFGPKDVKVYQNV--KISGTPVMEGRRLESIYVMSAESAYVDKTRK----NETT 2470
G + +V+ ++ M R+ ++ +S ++TR +
Sbjct: 373 QKGLRFIIEGDVCEVWHKTEKRMVMHSTMTKNRMFVVFAAVKKSKETEETRCLQVIGKAN 432
Query: 2471 DLWHARLGHVSYHXXXXXXXXXXXXXXPQLEI-RDDMVCAGCQYGKA--HQLPYQESNYR 2641
++WH R GH+++ P+ ++ ++ VC C GK +P +ES ++
Sbjct: 433 NMWHKRFGHLNHQGLRSLAEKEMVKGLPKFDLGEEEAVCDICLKGKQIRESIP-KESAWK 491
Query: 2642 AKQPLELIHSDLFGPVKQPSIRGMCYMVTFIDDFSRYVWVXXXXXXXXXXXXXXXXXXXX 2821
+ Q L+L+H+D+ GP+ S G Y++ FIDDFSR W
Sbjct: 492 STQVLQLVHTDICGPINPASTSGKRYILNFIDDFSRKCWTYLLSEKSETFQFFKEFKAEV 551
Query: 2822 XXXXXXXIKCLRTDNGGEYTSGEFSQYLQEHKIHHQLTCPNTPQQNGVAERKNRHLVETC 3001
+ CLR+D GGEY S EF +Y +E I QLT TPQQNGVAERKNR ++
Sbjct: 552 ERESGKKLVCLRSDRGGEYNSREFDEYCKEFGIKRQLTAAYTPQQNGVAERKNRSVMNMT 611
Query: 3002 RSMLHAKNVPGRF*AECMRTAAHVINRLPQPKLGFVSPFEKLWKIKPTVSHFRVFGCVCY 3181
R ML +VP +F E ++ A +++NR P L ++P EK KP+V H R+FG + Y
Sbjct: 612 RCMLMEMSVPRKFWPEAVQYAVYILNRSPSKALNDITPEEKWSSWKPSVEHLRIFGSLAY 671
Query: 3182 VFVPSHLRSKFDKKAIRCIFVGYDSQRKGWRCCDPTNDLCYTSRNVVFDETSS*-WTPQR 3358
VP R K D+K+I+C+ G + K +R DP SR+V FDE W +
Sbjct: 672 ALVPYQKRIKLDEKSIKCVMFGVSKESKAYRLYDPATGKILISRDVQFDEERGWEWEDKS 731
Query: 3359 VE--LPDSKKIGDKLQEEIVEVQKSHEEIENSQESSDEEEPMRTTQGPWQTGVHQPTPEE 3532
+E L + EE E+ +H ++ +E+ +EEE + T VHQ P
Sbjct: 732 LEEELVWDNSDHEPAGEEGPEI--NHNGQQDQEETEEEEETVAET-------VHQNLPA- 781
Query: 3533 NRPIQQEEVEVPTSPQPQLRKSTRQRKPNPKYANAVVEEDESTK---------EPVTFEE 3685
V T Q ++ + A ++ +DE + +PV FEE
Sbjct: 782 ----------VGTGGVRQRQQPVWMKDYVVGNARVLITQDEEDEVLALFIGPDDPVCFEE 831
Query: 3686 AVQHKEWRKAMEEEIVALKQNETWDLMPIPDGAKPISCKWVYKVKRRLDGSIERYKSRLV 3865
A Q + WRKAME EI ++++N TW+L+ +P+ AK I KW++K K G ++++K+RLV
Sbjct: 832 AAQLEVWRKAMEAEITSIEENNTWELVELPEEAKVIGLKWIFKTKFNEKGEVDKFKARLV 891
Query: 3866 ARGFSQQYGLDYDETFSPVAKITTVRMLIALATSKSWKLWQMDVKKAFLHGELDRDIYME 4045
A+G+ Q+YG+D+ E F+PVAK T+R+++ LA K W ++Q+DVK AFLHG+L D+++E
Sbjct: 892 AKGYHQRYGVDFYEVFAPVAKWDTIRLILGLAAEKGWSVFQLDVKSAFLHGDLKEDVFVE 951
Query: 4046 QPKGFENKENPGHVCKLKKALYGLKQAPRAWYGKIAEFLVQCGYSVAPADSSLFVKTQHG 4225
QPKGFE +E V KLKKALYGLKQAPRAWY +I EF + G+ + +LFVK +
Sbjct: 952 QPKGFEVEEESSKVYKLKKALYGLKQAPRAWYSRIEEFFGKEGFEKCYCEHTLFVKKERS 1011
Query: 4226 KLAIVLVYVDDLIVTGDDENEIQRTRTNLSVRFQMKELGELNHFLGLEMDRTKEGIFLCQ 4405
+V VYVDDLI TG I+ + ++ F M +LG++ +FLG+E+ + + GIF+ Q
Sbjct: 1012 DFLVVSVYVDDLIYTGSSMEMIEGFKNSMMEEFAMTDLGKMKYFLGVEVIQDERGIFINQ 1071
Query: 4406 QKYARDLLHKFGMIDCKPISTPIEINSKLCDEGK-DLENATMYRQLVGSLIYLTLTRPDI 4582
+KYA +++ K+GM C + PI KL G D + T ++QL+GSL YLT TRPD+
Sbjct: 1072 RKYAAEIIKKYGMEGCNSVKNPIVPGQKLTKAGAGDAVDPTEFKQLIGSLRYLTTTRPDL 1131
Query: 4583 AYAVGIASRFMEKPKKPHLEVVRQILRYVKGTIDYGLFYKKNKDCKVVGYCDADYAGCRD 4762
++V + SR+ME P + HL V++ILRYV+GT+D G+ Y++ ++VG+ D+DYAG D
Sbjct: 1132 IFSVNLVSRYMESPNEQHLLAVKRILRYVQGTLDLGIQYERGGATELVGFVDSDYAGDVD 1191
Query: 4763 TRRSTTGYVFSLGSAAVSWCSKRQPTVSLSTXXXXXXXXXXXXXXSTWLMQLMADLYQPV 4942
R+ST+GYVF LG A++W SK+QP V+LST + WL ++ ++
Sbjct: 1192 DRKSTSGYVFMLGGGAIAWASKKQPIVTLSTTEAEFVSASYGACQAVWLRNVLEEIGCRQ 1251
Query: 4943 SYATQLYCDNQSAIRIAENPVCHARTKHVEVHYHFVREKVLKGEIDLKHINTEEQVADVL 5122
T ++CDN S I++++NPV H R+KH+ V YHF+RE V +G I L + T +QVAD++
Sbjct: 1252 EGGTLVFCDNSSTIKLSKNPVLHGRSKHIHVRYHFLRELVKEGTIRLDYCTTTDQVADIM 1311
Query: 5123 TKGLSASKFEGFRTQLGIMRRKE 5191
TK + FE R ++G+ RR+E
Sbjct: 1312 TKAVKREVFEELRGRMGVRRREE 1334
>gb|AAD21687.1| Strong similarity to gi|3600044 T12H20.12 protease homolog from
Arabidopsis thaliana BAC gb|AF080119 and is a member of
the reverse transcriptase family PF|00078 [Arabidopsis
thaliana]
Length = 1415
Score = 731 bits (1886), Expect = 0.0
Identities = 471/1416 (33%), Positives = 697/1416 (49%), Gaps = 56/1416 (3%)
Frame = +2
Query: 1097 KLNNQNYTTWQTCMESYLQGQDLWDVVGGS-------------KVTPPEDAGALKKWKIK 1237
KL + NY W+T ES L Q L V G+ +VT E + W
Sbjct: 20 KLTDSNYLLWKTQFESLLSSQKLIGFVNGAVNAPSQSRLVVNGEVTSEEPNPLYESWFCT 79
Query: 1238 AGKTMFAIKTTIDEELLEYIRDKNTPKEAWDTFAALFSKKNDLRLQFLENELLSITQGEM 1417
+ T+ EE+L ++ + +T ++ W + A F+K + R L L +++ E
Sbjct: 80 DQLVRSWLFGTLSEEVLGHVHNLSTSRQIWVSLAENFNKSSVAREFSLRQNLQLLSKKEK 139
Query: 1418 TINQYFNKVKSLCRXXXXXXXXXXXXXXRMRRIIIHGLRPEFRSFIAAIQGWPEQPSLIN 1597
+ Y + K++C ++GL ++ IQ SL
Sbjct: 140 PFSVYCREFKTICDALSSIGKPVDESMKIFG--FLNGLGRDYDPITTVIQS-----SLSK 192
Query: 1598 LENLLADQEALTKQMLGVSLKKEEEAL-------FSYKKKGRFPRQNNXXXXXXXFIEGS 1756
L + Q L+ EEA F+ ++ Q N +
Sbjct: 193 LPTPTFNDVVSEVQGFDSKLQSYEEAASVTPHLAFNIERSESGSPQYNPNQKGRGRSGQN 252
Query: 1757 QTRGAQENRDE---RGQLSNRYRRPNGSCFVCGKRGHYARDCRFRKKQAEGNMATSNEQE 1927
+ RG R + Q S + P C +CG+ GH A C R
Sbjct: 253 KGRGGYSTRGRGFSQHQSSPQVSGPRPVCQICGRTGHTALKCYNRFDN------------ 300
Query: 1928 KYNSEEEWDAEASIAVIEQTHEEVCSSSLEEKSALMAVVPGRIDYENDWIVDSGCSNHMT 2107
N + E A +++ V + T +E W DS + H+T
Sbjct: 301 --NYQAEIQAFSTLRVSDDTGKE-------------------------WHPDSAATAHVT 333
Query: 2108 GDKEKLQNTAEYKGGRMVVTANNSRLPITHIGKTVITPRFSPSQVHLQDVYHVPGMKKNL 2287
LQ+ EY+G V+ + + LPITH G T I + S ++ L +V VP ++K+L
Sbjct: 334 SSTNGLQSATEYEGDDAVLVGDGTYLPITHTGSTTI--KSSNGKIPLNEVLVVPNIQKSL 391
Query: 2288 LSVAQLTSS---GNYVLFGPKDVKVYQNVKISGTPVMEGRRLESIYVMSAES--AYVDKT 2452
LSV++L G Y + Q K+ V G R +YV+ + A
Sbjct: 392 LSVSKLCDDYPCGVYFDANKVCIIDLQTQKV----VTTGPRRNGLYVLENQEFVALYSNR 447
Query: 2453 RKNETTDLWHARLGHVSYHXXXXXXXXXXXXXXPQLEIRDDMVCAGCQYGKAHQLPYQES 2632
+ T ++WH RLGH + R VC CQ GK+ +LP+ S
Sbjct: 448 QCAATEEVWHHRLGHANSKALQHLQNSKAIQINKS---RTSPVCEPCQMGKSSRLPFLIS 504
Query: 2633 NYRAKQPLELIHSDLFGPVKQPSIRGMCYMVTFIDDFSRYVWVXXXXXXXXXXXXXXXXX 2812
+ R PL+ IH DL+GP S +G+ Y F+DD+SRY W
Sbjct: 505 DSRVLHPLDRIHCDLWGPSPVVSNQGLKYYAIFVDDYSRYSWFYPLHNKSEFLSVFISFQ 564
Query: 2813 XXXXXXXXXXIKCLRTDNGGEYTSGEFSQYLQEHKIHHQLTCPNTPQQNGVAERKNRHLV 2992
IK ++D GGE+ S + +L EH IHH+++CP TPQQNG+AERK+RHLV
Sbjct: 565 KLVENQLNTKIKVFQSDGGGEFVSNKLKTHLSEHGIHHRISCPYTPQQNGLAERKHRHLV 624
Query: 2993 ETCRSMLHAKNVPGRF*AECMRTAAHVINRLPQPKLGFVSPFEKLWKIKPTVSHFRVFGC 3172
E SML + P +F E TA ++INRLP L +SP+E L+ KP S RVFG
Sbjct: 625 ELGLSMLFHSHTPQKFWVESFFTANYIINRLPSSVLKNLSPYEALFGEKPDYSSLRVFGS 684
Query: 3173 VCYVFVPSHLRSKFDKKAIRCIFVGYDSQRKGWRCCDPTNDLCYTSRNVVFDETSS*WTP 3352
CY + ++KFD ++++C+F+GY+SQ KG+RC P Y SRNV+F+E+
Sbjct: 685 ACYPCLRPLAQNKFDPRSLQCVFLGYNSQYKGYRCFYPPTGKVYISRNVIFNES------ 738
Query: 3353 QRVELPDSKKIG----------------DKLQEEIVE---VQKSHEEIENSQESSDEEEP 3475
ELP +K +K+ E V VQ + I+ + + +
Sbjct: 739 ---ELPFKEKYQSLVPQYSTPLLQAWQHNKISEISVPAAPVQLFSKPIDLNTYAGSQVTE 795
Query: 3476 MRTTQGPWQTGVHQPTPEENRPIQQE----EVEVPTSPQPQLRKSTRQRKPNPKYANAVV 3643
T P T ++ + EE P+ +E + +V S R +KPN +YA ++
Sbjct: 796 QLTDPEP--TSNNEGSDEEVNPVAEEIAANQEQVINSHAMTTRSKAGIQKPNTRYA--LI 851
Query: 3644 EEDESTKEPVTFEEAVQHKEWRKAMEEEIVALKQNETWDLMPIPDGAKPISCKWVYKVKR 3823
+T EP T A++H W +A+ EEI + TW L+P D +S KWV+K K
Sbjct: 852 TSRMNTAEPKTLASAMKHPGWNEAVHEEINRVHMLHTWSLVPPTDDMNILSSKWVFKTKL 911
Query: 3824 RLDGSIERYKSRLVARGFSQQYGLDYDETFSPVAKITTVRMLIALATSKSWKLWQMDVKK 4003
DGSI++ K+RLVA+GF Q+ G+DY ETFSPV + T+R+++ ++TSK W + Q+DV
Sbjct: 912 HPDGSIDKLKARLVAKGFDQEEGVDYLETFSPVVRTATIRLVLDVSTSKGWPIKQLDVSN 971
Query: 4004 AFLHGELDRDIYMEQPKGFENKENPGHVCKLKKALYGLKQAPRAWYGKIAEFLVQCGYSV 4183
AFLHGEL ++M QP GF + + P HVC+L KA+YGLKQAPRAW+ + FL+ G+
Sbjct: 972 AFLHGELQEPVFMYQPSGFIDPQKPTHVCRLTKAIYGLKQAPRAWFDTFSNFLLDYGFVC 1031
Query: 4184 APADSSLFVKTQHGKLAIVLVYVDDLIVTGDDENEIQRTRTNLSVRFQMKELGELNHFLG 4363
+ +D SLFV Q GK+ +L+YVDD+++TG D++ ++ L RF MK+LG +FLG
Sbjct: 1032 SKSDPSLFVCHQDGKILYLLLYVDDILLTGSDQSLLEDLLQALKNRFSMKDLGPPRYFLG 1091
Query: 4364 LEMDRTKEGIFLCQQKYARDLLHKFGMIDCKPISTPI-----EINSKLCDEGKDLENATM 4528
++++ G+FL Q YA D+L + GM DC P+ TP+ +NS+L E T
Sbjct: 1092 IQIEDYANGLFLHQTAYATDILQQAGMSDCNPMPTPLPQQLDNLNSELFAE------PTY 1145
Query: 4529 YRQLVGSLIYLTLTRPDIAYAVGIASRFMEKPKKPHLEVVRQILRYVKGTIDYGLFYKKN 4708
+R L G L YLT+TRPDI +AV + M P ++++ILRY+KGTI GL K+N
Sbjct: 1146 FRSLAGKLQYLTITRPDIQFAVNFICQRMHSPTTSDFGLLKRILRYIKGTIGMGLPIKRN 1205
Query: 4709 KDCKVVGYCDADYAGCRDTRRSTTGYVFSLGSAAVSWCSKRQPTVSLSTXXXXXXXXXXX 4888
+ Y D+D+AGC++TRRSTTG+ LGS +SW +KRQPTVS S+
Sbjct: 1206 STLTLSAYSDSDHAGCKNTRRSTTGFCILLGSNLISWSAKRQPTVSNSSTEAEYRALTYA 1265
Query: 4889 XXXSTWLMQLMADLYQPVSYATQLYCDNQSAIRIAENPVCHARTKHVEVHYHFVREKVLK 5068
TW+ L+ DL P TQ+YCDN SA+ ++ NP H R+KH + YH++RE+V
Sbjct: 1266 AREITWISFLLRDLGIPQYLPTQVYCDNLSAVYLSANPALHNRSKHFDTDYHYIREQVAL 1325
Query: 5069 GEIDLKHINTEEQVADVLTKGLSASKFEGFRTQLGI 5176
G I+ +HI+ Q+ADV TK L F R++LG+
Sbjct: 1326 GLIETQHISATFQLADVFTKSLPRRAFVDLRSKLGV 1361
>gb|AAG10812.1|AC018460_6 Putative retroelement polyprotein [Arabidopsis thaliana]
Length = 1404
Score = 727 bits (1876), Expect = 0.0
Identities = 492/1452 (33%), Positives = 727/1452 (50%), Gaps = 92/1452 (6%)
Frame = +2
Query: 1100 LNNQNYTTWQTCMESYLQGQDLWDVVGGSKVTPPED---------AGALKKWKIKAGKTM 1252
L NY TW ++ L G+ LW V S+ P ED + +KW + +
Sbjct: 13 LQGGNYLTWSRTTKTVLCGRGLWSHVISSQA-PKEDKEEEETETISPEEEKWFQEDQAVL 71
Query: 1253 FAIKTTIDEELLEYIRDKNTPKEAWDTFAALFSKKNDLRLQF-LENELLSITQGEMTINQ 1429
++ +++ +LE T KE WDT ++ +++L F ++ + ++Q ++ +
Sbjct: 72 ALLQNSLETSILEGYSYCETAKELWDTLKNVYGNESNLTRVFEVKKAINELSQEDLEFTK 131
Query: 1430 YFNKVKSLCRXXXXXXXXXXXXXXRMRRIIIHGLRPEFRSFIAAIQGWPEQPSLINLENL 1609
+F K +SL + I+H R + + F + P LI ++L
Sbjct: 132 HFGKFRSL------WSELKSLRPGTLDPKILHERREQDKVFGLLLTLNPGYNDLI--KHL 183
Query: 1610 LADQEALTKQMLGVSLKKEEEALFSYKKKGRFPRQNNXXXXXXXFIEGSQTRGAQENRDE 1789
L ++ + + ++KE+ + + K N E +G +N D
Sbjct: 184 LRSEKLPSLDEVCSKIQKEQGSTGLFGGKSELITANKG--------EVVANKGVYKNED- 234
Query: 1790 RGQLSNRYRRPNGSCFVCGKRGHYARDC----------RFRKKQAEGNMATSNEQEKYNS 1939
R +C C K+GH C +F+ +A + T EQ + S
Sbjct: 235 ---------RKLLTCDHCKKKGHTKDKCWLLHPHLKPAKFKDSRAHFSQETHEEQSQAGS 285
Query: 1940 EE------------EWDAEASIAVIEQTHEEVCSSSLEEKSALMAVVPGRIDYENDWIVD 2083
+ + D EA I I E + S + S + ++D
Sbjct: 286 SKGETSTSFGDYVRKSDLEALIKSIVSLKESGITFSSQTSSGSI-------------VID 332
Query: 2084 SGCSNHMTGDKEKLQNTAEYKGGRMVVTANNSRLPITHIGKTVITPRFSPSQVHLQDVYH 2263
SG S+HM + L N G V+ AN ++PI IG + + S + +
Sbjct: 333 SGASHHMISNSNLLDNIEPALG--HVIIANGDKVPIEGIGNLKLFNKDSKA-------FF 383
Query: 2264 VPGMKKNLLSVAQLTSSGN-YVLFGPKDVKVYQNVKISGTPVMEGRRLESIYVM-----S 2425
+P NLLSV + T N Y +FGP DV +Q+++ +G + EG +YV+ +
Sbjct: 384 MPKFTSNLLSVKRTTRDLNCYAIFGPNDV-YFQDIE-TGKVIGEGGSKGELYVLEDLSPN 441
Query: 2426 AESAYVDKTRKN-ETTDLWHARLGHVSYHXXXXXXXXXXXXXXPQLEIRDDMVCAGCQYG 2602
+ S + K+ LWHARLGH P + D C C G
Sbjct: 442 SSSCFSSKSHLGISFNTLWHARLGH--------PHTRALKLMLPNISF-DHTSCEACILG 492
Query: 2603 KAHQLPYQESNYRAKQPLELIHSDLFGPVKQPSIR--GMCYMVTFIDDFSRYVWVXXXXX 2776
K + + +S ++ +L+HSD++ P + Y VTFI++ S+Y W+
Sbjct: 493 KHCKSVFPKSLTIYEKCFDLVHSDVW---TSPCVSRDNNKYFVTFINEKSKYTWITLLPS 549
Query: 2777 XXXXXXXXXXXXXXXXXXXXXXIKCLRTDNGGEYTSGEFSQYLQEHKIHHQLTCPNTPQQ 2956
IK RTDNGGEYTS +F +L + I HQ +CP TPQQ
Sbjct: 550 KDRVFEAFTNFETYVTNQFNAKIKVFRTDNGGEYTSQKFRDHLAKRGIIHQTSCPYTPQQ 609
Query: 2957 NGVAERKNRHLVETCRSMLHAKNVPGRF*AECMRTAAHVINRLPQPKLGFVSPFEKLWKI 3136
NGVAERKNRHL+E RSM+ +VP RF + + TA ++INR P L +SPFE L
Sbjct: 610 NGVAERKNRHLMEVARSMMFHTSVPKRFWGDAVLTACYLINRTPTKVLSDLSPFEVLNNT 669
Query: 3137 KPTVSHFRVFGCVCYVFVPSHLRSKFDKKAIRCIFVGYDSQRKGWRCCDPTNDLCYTSRN 3316
KP + H RVFGCVC+V +P RSK D K+ +C+F+GY + +KG++C DPT + + SR+
Sbjct: 670 KPFIDHLRVFGCVCFVLIPGEQRSKLDAKSTKCMFLGYSTTQKGYKCFDPTKNRTFISRD 729
Query: 3317 VVFDE-----TSS*W---------TPQRVELPDSKKIGDKLQEEIVEVQKSHEEIENSQE 3454
V F E W T RVE K + D L + + E+ QE
Sbjct: 730 VKFLENQDYNNKKDWENLKDLTHSTSDRVE--TLKFLLDHLGNDSTSTTQHQPEMTQDQE 787
Query: 3455 S-SDEEEPMRTTQGPWQTGVHQPTP---EENRPIQQ-----EEVEVPTS---PQPQLRKS 3598
+ E E + T V + P E + +Q+ E E PT P P LR+S
Sbjct: 788 DLNQENEEVSLQHQENLTHVQEDPPNTQEHSEHVQEIQDDSSEDEEPTQVLPPPPPLRRS 847
Query: 3599 TRQRKPNPKY-ANAVVEEDESTKE--------------------PVTFEEAVQHKEWRKA 3715
TR R+ + +NAV ++T P T+EEA++ KEWR A
Sbjct: 848 TRIRRKKEFFNSNAVAHPFQATCSLALVPLDHQAFLSKISEHWIPQTYEEAMEVKEWRDA 907
Query: 3716 MEEEIVALKQNETWDLMPIPDGAKPISCKWVYKVKRRLDGSIERYKSRLVARGFSQQYGL 3895
+ +EI A+K+N TWD +P G K +S +WV+ +K + +G IERYK+RLVARGF+Q YG
Sbjct: 908 IADEINAMKRNHTWDEDDLPKGKKTVSSRWVFTIKYKSNGDIERYKTRLVARGFTQTYGS 967
Query: 3896 DYDETFSPVAKITTVRMLIALATSKSWKLWQMDVKKAFLHGELDRDIYMEQPKGFENKEN 4075
DY ETF+PVAK+ TVR+++ALAT+ SW LWQMDVK AFL GEL+ D+YM P G E+
Sbjct: 968 DYMETFAPVAKLHTVRVVLALATNLSWGLWQMDVKNAFLQGELEDDVYMTPPPGLEDTIP 1027
Query: 4076 PGHVCKLKKALYGLKQAPRAWYGKIAEFLVQCGYSVAPADSSLFVKTQHGKLAIVLVYVD 4255
V +L+KA+YGLKQ+PRAWY K++ L G+ + +D +LF + +VL+YVD
Sbjct: 1028 CDKVLRLRKAIYGLKQSPRAWYHKLSRTLKDHGFKKSESDHTLFTLQSPQGIVVVLIYVD 1087
Query: 4256 DLIVTGDDENEIQRTRTNLSVRFQMKELGELNHFLGLEMDRTKEGIFLCQQKYARDLLHK 4435
DLI+TGD+++ I T+T L F +K+LGEL +FLG+E+ R+ G+FL Q+KY DLL++
Sbjct: 1088 DLIITGDNKDGIDSTKTFLKSCFDIKDLGELKYFLGIEVCRSNAGLFLSQRKYTLDLLNE 1147
Query: 4436 FGMIDCKPISTPIE----INSKLCDEGKDLENATMYRQLVGSLIYLTLTRPDIAYAVGIA 4603
G +D KP TP+E +N K E + +A +YR+LVG LIYLT TRPDI +AV
Sbjct: 1148 TGFMDAKPARTPLEDGYKVNRKGEKEDEKFGDAPLYRKLVGKLIYLTNTRPDICFAVNQV 1207
Query: 4604 SRFMEKPKKPHLEVVRQILRYVKGTIDYGLFYKKNKDCKVVGYCDADYAGCRDTRRSTTG 4783
S+ M+ P H +V +ILRY+KG+ G++ KN ++VGYCDADYAG R RRS TG
Sbjct: 1208 SQHMKVPMVYHWNMVERILRYLKGSSGQGIWMGKNSSTEIVGYCDADYAGDRGDRRSKTG 1267
Query: 4784 YVFSLGSAAVSWCSKRQPTVSLSTXXXXXXXXXXXXXXSTWLMQLMADLYQPVSYATQLY 4963
Y +G +W +K+Q VS S+ TWL L+ DL ++
Sbjct: 1268 YCTFIGGNLATWKTKKQKVVSCSSAESEYRAMRKLTNELTWLKALLKDLGIEQHMPITMH 1327
Query: 4964 CDNQSAIRIAENPVCHARTKHVEVHYHFVREKVLKGEIDLKHINTEEQVADVLTKGLSAS 5143
CDN++AI IA N V H RTKH+EV H VREK+++G + +E+Q+AD+ TK S
Sbjct: 1328 CDNKAAIYIASNSVFHERTKHIEVDCHKVREKIIEGVTLPCYTRSEDQLADIFTKAASLK 1387
Query: 5144 KFEGFRTQLGIM 5179
+LG++
Sbjct: 1388 VCNFIHGKLGLV 1399
>emb|CAN60366.1| hypothetical protein VITISV_031870 [Vitis vinifera]
Length = 1274
Score = 722 bits (1864), Expect = 0.0
Identities = 469/1376 (34%), Positives = 707/1376 (51%), Gaps = 22/1376 (1%)
Frame = +2
Query: 1115 YTTWQTCMESYLQGQDLWDVVGGSKVTPPEDAGALKKWKIKAGKTMFAIKTTIDEELLEY 1294
Y W M++ + QDLWD+V P E+A LK+ K K +F I+ + E +
Sbjct: 24 YEFWSIKMKTLFKSQDLWDLVENGYPYPDEEA-RLKENTKKDSKALFFIQQAVHESIFSK 82
Query: 1295 IRDKNTPKEAWDTFAALF---SKKNDLRLQFLEN--ELLSITQGEMTINQYFNKVKSLCR 1459
I T KEAW T F SK ++LQ L E L + GE ++ +F VK++
Sbjct: 83 IAAATTAKEAWTTLKTAFQGSSKVITVKLQSLRRDFETLHMKNGE-SMQDFF--VKNILD 139
Query: 1460 XXXXXXXXXXXXXXRMRRIIIHGLRPEFRSFIAAIQGWPEQPSLINLENLLADQEALTKQ 1639
++ L P+F +AAI+ + S + + L+ ++ +
Sbjct: 140 QTVVAK-------------VLRSLTPKFDHVVAAIEE-SKDLSTYSFDELMGSLQSHEVR 185
Query: 1640 MLGVSLKKEEEALF-----SYKKKGRFPRQNNXXXXXXXFIEGSQTRGAQENRDERGQLS 1804
+ K EE+A + S +K G G + RG + + + Q +
Sbjct: 186 LSRTEEKNEEKAFYTKGETSDQKNGGREATGRGRGRGGAHGRGGRGRGRGDAQGYQRQST 245
Query: 1805 NRYR-RPNGSCFVCGKRGHYARDCRFRKKQAEGNMATSNEQEKYNSEEEWDAEASIAVIE 1981
+ R + N C+ C + GH +C KK+ + A EQE E + +
Sbjct: 246 EKNRNKSNIQCYYCKRFGHVQXECW--KKERQEKQANYVEQE----------EDQVKLFM 293
Query: 1982 QTHEEVCSSSLEEKSALMAVVPGRIDYENDWIVDSGCSNHMTGDKEKLQNTAEYKGGRMV 2161
+EEV SS+ N W +DSGCSNHMTG K + E ++
Sbjct: 294 XYNEEVVSSN------------------NIWFLDSGCSNHMTGIKSLFKELDE--SHKLK 333
Query: 2162 VTANNSRLPITHIGKTVITPRFSPSQVHL-QDVYHVPGMKKNLLSVAQLTSSGNYVLFGP 2338
V + + GK ++ V L +VY +P + +NLLSV QL SG +LF
Sbjct: 334 VKLGDDKQVXVE-GKGIMAVNNGHGNVKLLYNVYFIPSLTQNLLSVGQLMVSGYSILFDG 392
Query: 2339 KD--VKVYQNVKISGTPVMEGRRLESIYVMSAESAYVDKTRKNETTDLWHARLGHVSYHX 2512
+K ++ +I M +L + V S E + ++ ++LWH R GH++
Sbjct: 393 ATCVIKDKKSDQIIVNVRMAANKLFPLEVSSIEK-HALVVKETSESNLWHLRYGHLNVKG 451
Query: 2513 XXXXXXXXXXXXXPQLEIRDDMVCAGCQYGKAHQLPYQES-NYRAKQPLELIHSDLFGPV 2689
P+++ + VC GC YGK + P+ + + RA LE+IH+DL GP+
Sbjct: 452 LKLLSKKEMVFGLPKIDSVN--VCEGCIYGKQSKKPFPKGRSRRASSCLEIIHADLCGPM 509
Query: 2690 KQPSIRGMCYMVTFIDDFSRYVWVXXXXXXXXXXXXXXXXXXXXXXXXXXXIKCLRTDNG 2869
+ S G Y + F DD SR WV IK LRTD G
Sbjct: 510 QTASFGGSRYFLLFTDDHSRMSWVYFLQSKAETFETFKKFKAFVEKQSGKCIKVLRTDRG 569
Query: 2870 GEYTSGEFSQYLQEHKIHHQLTCPNTPQQNGVAERKNRHLVETCRSMLHAKNVPGRF*AE 3049
GE+ S +F + +E +H +LT P +P+QNGVAERKNR +VE RSM+ AKN+ F AE
Sbjct: 570 GEFLSNDFKVFCEEEGLHRELTTPYSPEQNGVAERKNRTVVEMARSMMKAKNLSNHFWAE 629
Query: 3050 CMRTAAHVINRLPQPKLGFVSPFEKLWKIKPTVSHFRVFGCVCYVFVPSHLRSKFDKKAI 3229
+ TA +++N P + +P+E + KP VSH +VFG V Y + SH S D+K+I
Sbjct: 630 GVATAVYLLNISPTKAVLNRTPYEAWYGRKPWVSHLKVFGSVAYTLIDSHNHSNLDEKSI 689
Query: 3230 RCIFVGYDSQRKGWRCCDPTNDLCYTSRNVVFDETSS*WTPQRVELPDSKKIGDKLQEEI 3409
+CIF+GY SQ KG++ +P + SRNVV DE +S WT +
Sbjct: 690 KCIFIGYCSQSKGYKLYNPVSGKIIVSRNVVXDEKAS-WTWR------------------ 730
Query: 3410 VEVQKSHEEIENSQESSDEEEPMRTTQGPWQTGVHQPTPEENRPIQQEEVEVPTSPQPQL 3589
V + EI + E + E+ + Q P PTP + P+SP
Sbjct: 731 VSEDGALVEISSESEVAQSEDQQPSVQIP-----AXPTPSHS----------PSSPNLSS 775
Query: 3590 RKSTRQRKPN-PKYANAVVEEDESTK-----EPVTFEEAVQHKEWRKAMEEEIVALKQNE 3751
S++ + P+ ++ + E+T+ +P TFEEAV+ +EW AM+EEIVA+++NE
Sbjct: 776 SSSSQSSEETPPRKFRSLRDIYETTQVLFVADPTTFEEAVEKEEWCSAMKEEIVAIEKNE 835
Query: 3752 TWDLMPIPDGAKPISCKWVYKVKRRLDGSIERYKSRLVARGFSQQYGLDYDETFSPVAKI 3931
TW+L+ +P+ I KWV++ K DGSI+++K+RLVA+G++QQ+G+DYD+TFSPVA+
Sbjct: 836 TWELVELPEDKNVIGVKWVFRTKYLADGSIQKHKARLVAKGYAQQHGVDYDDTFSPVAR- 894
Query: 3932 TTVRMLIALATSKSWKLWQMDVKKAFLHGELDRDIYMEQPKGFENKENPGHVCKLKKALY 4111
E P+GF HV +LKKALY
Sbjct: 895 ------------------------------------FETPEGFIVPSKEEHVYRLKKALY 918
Query: 4112 GLKQAPRAWYGKIAEFLVQCGYSVAPADSSLFVKTQHGKLAIVLVYVDDLIVTGDDENEI 4291
GLKQAPRAWY KI + V+ G+ + ++ +L++K Q DD+I G I
Sbjct: 919 GLKQAPRAWYSKIDSYFVENGFKRSKSEPNLYLKRQ-----------DDMIYMGSSSXLI 967
Query: 4292 QRTRTNLSVRFQMKELGELNHFLGLEMDRTKEGIFLCQQKYARDLLHKFGMIDCKPISTP 4471
+ + +F+M LG L+ FLGLE+ + ++G+F+ Q+KYA DLL KF M++CK ++TP
Sbjct: 968 NEFKACMKKKFEMSXLGLLHXFLGLEVKQVEDGVFVSQRKYAVDLLKKFNMLNCKVVATP 1027
Query: 4472 IEINSKL-CDEGKDLENATMYRQLVGSLIYLTLTRPDIAYAVGIASRFMEKPKKPHLEVV 4648
+ N KL ++G + +A +R LVG LIYLT TRPDIA+AVG+ SRFM P K HL
Sbjct: 1028 MNSNEKLQAEDGTERADARRFRSLVGGLIYLTHTRPDIAFAVGVISRFMHCPSKQHLGAA 1087
Query: 4649 RQILRYVKGTIDYGLFYKKNKDCKVVGYCDADYAGCRDTRRSTTGYVFSLGSAAVSWCSK 4828
+++LRY+ GT D+G++Y ++ K+VGY D+D+AGC + R+S +GY+FSLGS AV W SK
Sbjct: 1088 KRLLRYIAGTYDFGIWYGHVQEFKLVGYTDSDWAGCLEDRKSXSGYMFSLGSGAVCWSSK 1147
Query: 4829 RQPTVSLSTXXXXXXXXXXXXXXSTWLMQLMADLYQPVSYATQLYCDNQSAIRIAENPVC 5008
+Q +LS+ + WL +++AD+ Q T +YCDN++AI + +NP
Sbjct: 1148 KQAVTALSSXEAEYTAATSSXCQAVWLRRILADINQEHEEPTVIYCDNKAAIAMTKNPAY 1207
Query: 5009 HARTKHVEVHYHFVREKVLKGEIDLKHINTEEQVADVLTKGLSASKFEGFRTQLGI 5176
H RTKHV++ HF+R+ V++G++ L++ NT EQVADVLTK LS K FR++LG+
Sbjct: 1208 HGRTKHVDIRVHFIRDLVVEGKVVLQYCNTNEQVADVLTKALSRDKHVYFRSKLGV 1263
>ref|XP_008337255.1| PREDICTED: retrovirus-related Pol polyprotein from transposon TNT
1-94 [Malus domestica]
Length = 1750
Score = 720 bits (1859), Expect = 0.0
Identities = 401/1122 (35%), Positives = 620/1122 (55%), Gaps = 6/1122 (0%)
Frame = +2
Query: 1832 CFVCGKRGHYARDCRFRKKQAEGNMATSNEQEKYNSEEEWDAEASIAVIEQTHEEVCSSS 2011
C+ C K GH+AR+C K +K NS + + ++ +S+
Sbjct: 308 CYNCDKFGHWARECTIGKIX-----------QKANSANQVEVTGNLFY--------ANSA 348
Query: 2012 LEEKSALMAVVPGRIDYENDWIVDSGCSNHMTGDKEKLQNTAEYKGGRMVVTANNSRLPI 2191
+ EK+ +W +DSGCSNHMTG+ + L + G++ + + + +
Sbjct: 349 ISEKNV-----------NGNWYIDSGCSNHMTGNADLLVDIRTNVXGKVQMX---TXVLV 394
Query: 2192 THIGKTVITPRFSPSQVHLQDVYHVPGMKKNLLSVAQLTSSGNYVLFGPKDVKVYQNVKI 2371
G + + + ++++V H+PG+K+NLLSV Q+ G Y++FG V+ +
Sbjct: 395 NVAGMGSLEIDTNKGKKYIREVMHLPGLKENLLSVGQMDEHGYYLVFGGGLCSVFDGPSL 454
Query: 2372 SGTPVMEGRRLESIYVMSA--ESAYVDKTRKNETTDLWHARLGHVSYHXXXXXXXXXXXX 2545
+ ++ Y +S ++ V K + +T WH RLGH+++
Sbjct: 455 DNLVIKXKKKENRCYXLSLLQDNRLVXKASIDHSTRTWHRRLGHLNFRGLKQLXEKNMVH 514
Query: 2546 XXPQLEIRDDMVCAGCQYGKAHQ--LPYQESNYRAKQPLELIHSDLFGPVKQPSIRGMCY 2719
P LE D VC GCQ+GK + P +S +RA P ELIH DL GP+ S+ G Y
Sbjct: 515 GLPYLEEIKD-VCQGCQFGKQXRDWFPKNQS-WRANCPXELIHXDLCGPMXNASLAGNRY 572
Query: 2720 MVTFIDDFSRYVWVXXXXXXXXXXXXXXXXXXXXXXXXXXXIKCLRTDNGGEYTSGEFSQ 2899
+ IDD +R +WV K LR+D GGE+ S EF++
Sbjct: 573 FMLLIDDXTRMIWVYFLRYKSDAFNYFKRFKSMVELQSGFKXKSLRSDRGGEFLSSEFTK 632
Query: 2900 YLQEHKIHHQLTCPNTPQQNGVAERKNRHLVETCRSMLHAKNVPGRF*AECMRTAAHVIN 3079
+ + I QLT TPQQNGV ERKNR +VE ++MLH + +P AE + TA +++N
Sbjct: 633 FCETEGIQRQLTMAYTPQQNGVVERKNRTVVEMAKTMLHDRGMPYVLWAEAVHTAVYILN 692
Query: 3080 RLPQPKLGFVSPFEKLWKIKPTVSHFRVFGCVCYVFVPSHLRSKFDKKAIRCIFVGYDSQ 3259
R P LG ++PFE KP ++H ++FG +CYV VP+ R K D K+I+ +FVGY +
Sbjct: 693 RCPTMALGNMTPFEAYSGRKPGIAHLKIFGSLCYVHVPTETRQKLDAKSIKGVFVGYATC 752
Query: 3260 RKGWRCCDPTNDLCYTSRNVVFDETSS*WTPQRVELPDSKKIGDKLQEEIVEVQKSHEEI 3439
KG+R +P + SR+VVFDE+ + W + E P S +Q++ V
Sbjct: 753 EKGYRIFBPCTNKLILSRDVVFDESMT-WNWK--ENPQSSAAATYIQDQPENVVGM---- 805
Query: 3440 ENSQESSDEEEPMRTTQGPWQTGVHQPTPEENRPIQQEEVEVPTSPQPQLRKSTRQRKPN 3619
N E S E + P+ + E+ + ++ P + R +
Sbjct: 806 -NPYEMSVIEGSSLSPSSPFHIQEQESCTPESAKLSEDYDHTPL----------KWRNLD 854
Query: 3620 PKYANAVVEEDESTKEPVTFEEAVQHKEWRKAMEEEIVALKQNETWDLMPIPDGAKPISC 3799
+A + EP +EEA Q + W +AM++E+ +++N TW+L+ P I
Sbjct: 855 DIFAQCNL----CVMEPERYEEAAQDESWLRAMQDELTMIEKNGTWELVDRPTMQPVIGV 910
Query: 3800 KWVYKVKRRLDGSIERYKSRLVARGFSQQYGLDYDETFSPVAKITTVRMLIALATSKSWK 3979
KWVYK K LDG++ + K+RLVA+G++Q+ G DY+ET++PVA++ T+R LIALA KSW+
Sbjct: 911 KWVYKTKLNLDGTVLKNKARLVAKGYAQKPGFDYNETYAPVARLDTIRTLIALAAQKSWR 970
Query: 3980 LWQMDVKKAFLHGELDRDIYMEQPKGFENKENPGHVCKLKKALYGLKQAPRAWYGKIAEF 4159
L+Q+DVK AFL+G L ++Y++QP+GF + V +L KALYGLKQAPRAWYG+I +
Sbjct: 971 LYQLDVKSAFLNGVLQEEVYVDQPEGFTVQGKEDKVYRLHKALYGLKQAPRAWYGEIDAY 1030
Query: 4160 LVQCGYSVAPADSSLFVKTQHGK-LAIVLVYVDDLIVTGDDENEIQRTRTNLSVRFQMKE 4336
QCG+ + ++ +L++K++ K + IV +YVDD++ TG + ++ + ++ ++++M +
Sbjct: 1031 FSQCGFQKSLSEPTLYIKSRGEKDIIIVSIYVDDIVYTGSSKEMLEEFKEDMMMKYEMTD 1090
Query: 4337 LGELNHFLGLEMDRTKEGIFLCQQKYARDLLHKFGMIDCKPISTPIEINSKLC-DEGKDL 4513
LG L+HFLG+ + +T IF+ Q+KYA LL+KFG+ +CK +STP+ KL D+G
Sbjct: 1091 LGLLHHFLGMGVIQTNFSIFIHQKKYASSLLNKFGLNECKSVSTPLISAEKLSKDDGSGP 1150
Query: 4514 ENATMYRQLVGSLIYLTLTRPDIAYAVGIASRFMEKPKKPHLEVVRQILRYVKGTIDYGL 4693
N YR++VGSL+YLT TRPDI YA + SRFM P H +++LRY+KGT+DYGL
Sbjct: 1151 ANEEQYRKIVGSLLYLTATRPDIMYAASLLSRFMHSPTNKHYGTAKRVLRYIKGTLDYGL 1210
Query: 4694 FYKKNKDCKVVGYCDADYAGCRDTRRSTTGYVFSLGSAAVSWCSKRQPTVSLSTXXXXXX 4873
Y K K+ ++G+CD+D+ G D +ST+GY FS GS SW S +Q V+LST
Sbjct: 1211 EYVKGKNAMLIGFCDSDWGGSVDDSKSTSGYAFSFGSGVFSWASVKQNCVALSTAEAEYI 1270
Query: 4874 XXXXXXXXSTWLMQLMADLYQPVSYATQLYCDNQSAIRIAENPVCHARTKHVEVHYHFVR 5053
+ WL ++ D + + AT ++CDN +AI I +NPV H +TKH++ YHF++
Sbjct: 1271 SASEATVQAIWLRFVLEDFGEMQTEATPVHCDNTAAIAITKNPVFHQKTKHIDRRYHFIK 1330
Query: 5054 EKVLKGEIDLKHINTEEQVADVLTKGLSASKFEGFRTQLGIM 5179
+ +G IDL + T EQVAD+ TK LS +F R L +
Sbjct: 1331 NALQEGIIDLVYCPTNEQVADIFTKALSKDRFNYLRDMLAFL 1372
>gb|ABW74566.1| integrase [Boechera divaricarpa]
Length = 1165
Score = 720 bits (1859), Expect = 0.0
Identities = 433/1221 (35%), Positives = 651/1221 (53%), Gaps = 15/1221 (1%)
Frame = +2
Query: 1586 SLINLENLLADQEALTK----QMLGVSLKKEEEALFSY--KKKGRFPRQNNXXXXXXXFI 1747
SL+ E+ L + T+ QM G S ++ ++F + +GRF N
Sbjct: 17 SLLGHEDRLGKKTEKTEEKAFQMKGESSGQKNSSVFEAAGRGRGRFGGHGNYGR------ 70
Query: 1748 EGSQTRGAQENRDERGQLSNR-YRRPNGSCFVCGKRGHYARDCRFRKKQAEGNMATSNEQ 1924
+ RG +N Q NR + + C C K GH +C KKQ E A EQ
Sbjct: 71 --GKGRGYYDNSSSSNQSYNRGTNKSDIQCHYCKKYGHMQTNCW--KKQKEEKHACFVEQ 126
Query: 1925 EKYNSEEEWDAEASIAVIEQTHEEVCSSSLEEKSALMAVVPGRIDYENDWIVDSGCSNHM 2104
E EQ + S E ++ W +DSGCSNHM
Sbjct: 127 EN----------------EQPRLFMAFESEEASKSV-------------WYLDSGCSNHM 157
Query: 2105 TGDKEKLQNTAEYKGGRMVVTANNSRLPITHIGKTVITPRFSPSQVHL-QDVYHVPGMKK 2281
TG K + E ++ V N + + G+ V+ + L VY++P +
Sbjct: 158 TGTKSSFKELDE--SHKLKVKLGNDK-EVQVEGRGVVAVHNGHGNLKLIYGVYYIPDLAH 214
Query: 2282 NLLSVAQLTSSGNYVLFGPKDVKVYQNVKISGTPVMEGRRLESIYVMSAESAYVDK--TR 2455
NLLSV Q+ + VLF + V + K T M + ++Y + S +
Sbjct: 215 NLLSVGQMVENNCSVLFDGNEC-VIKEKKSGVTLAMVKKTSNNLYPLEMSSVETKALVAK 273
Query: 2456 KNETTDLWHARLGHVSYHXXXXXXXXXXXXXXPQLEIRDDMVCAGCQYGKAHQLPYQESN 2635
++ + L H R GH+ + P++ +C GC YGK + +
Sbjct: 274 VSDISKLLHLRYGHLHENGLRVLNQKDMVIGLPKIGALK--LCEGCVYGKQSRRSFPVGR 331
Query: 2636 YR-AKQPLELIHSDLFGPVKQPSIRGMCYMVTFIDDFSRYVWVXXXXXXXXXXXXXXXXX 2812
R A Q LE++H+DL GP++ S+ G Y + DD+SR WV
Sbjct: 332 ARRATQYLEIVHADLCGPMQTASLGGSKYFLMLTDDYSRMSWVYFLKSKGEAFDMFKNFK 391
Query: 2813 XXXXXXXXXXIKCLRTDNGGEYTSGEFSQYLQEHKIHHQLTCPNTPQQNGVAERKNRHLV 2992
+K LRTD GGE+TS +F+Q+ ++ IHH+LT TP+QNGVAERKN +V
Sbjct: 392 ALVEKQSEQQVKVLRTDRGGEFTSTKFNQFCEKEGIHHELTTAYTPEQNGVAERKNTTVV 451
Query: 2993 ETCRSMLHAKNVPGRF*AECMRTAAHVINRLPQPKLGFVSPFEKLWKIKPTVSHFRVFGC 3172
E RSML +N+P +F AE +RTA +++N P + +P+E KP VSH RVFG
Sbjct: 452 EMARSMLKERNLPNQFWAESVRTAVYLLNISPTKAVLNRTPYEAWCGRKPGVSHLRVFGS 511
Query: 3173 VCYVFVPSHLRSKFDKKAIRCIFVGYDSQRKGWRCCDPTNDLCYTSRNVVFDETSS*WTP 3352
VCY + +H R K D+K+ +CIF+GY SQ KG+R +P + SRNV FDE + WT
Sbjct: 512 VCYSLIDAHNRKKLDEKSEKCIFLGYCSQSKGYRLYNPVSGKIVESRNVTFDEEAV-WTW 570
Query: 3353 QRVELPDSKKIGDKLQEEIVEVQKSHEEIENSQESSDEEEPMRTTQGPWQTGVHQPTPEE 3532
+ GD E+VE+ + E+ EN ++ T P + P P
Sbjct: 571 RE---------GDN--GELVEIFVNDEQEENPSPANS------ATNTPASSAPSSPGPNN 613
Query: 3533 NRPIQQEEVEVPTSPQPQLRKSTRQRKPNPKYANAVVEEDES--TKEPVTFEEAVQHKEW 3706
E SP PQ +S R+ + EE + + +PVT EA +EW
Sbjct: 614 GNGSSDGEGSSSISP-PQKFRSLRE----------IYEEQHAFFSADPVTVNEAATKEEW 662
Query: 3707 RKAMEEEIVALKQNETWDLMPIPDGAKPISCKWVYKVKRRLDGSIERYKSRLVARGFSQQ 3886
RKAMEEEI ++++N+TW L+ +P+ I KWV+K K + D +I++YK+RLV +G++Q+
Sbjct: 663 RKAMEEEIASIEKNQTWQLVELPEEKHSIGVKWVFKTKYQADDNIQKYKARLVVKGYAQE 722
Query: 3887 YGLDYDETFSPVAKITTVRMLIALATSKSWKLWQMDVKKAFLHGELDRDIYMEQPKGFEN 4066
YG+DY++TFSPVA+ T+R L+AL W ++Q DVK AFL+GEL ++Y++QP+GF
Sbjct: 723 YGVDYEKTFSPVARFDTLRTLLALGAYMHWPIYQFDVKSAFLNGELREEVYVDQPEGFIV 782
Query: 4067 KENPGHVCKLKKALYGLKQAPRAWYGKIAEFLVQCGYSVAPADSSLFVKTQH-GKLAIVL 4243
+ G V +L KALYGLKQAPRAWY KI + + G+ + ++ +L++K Q G + +V
Sbjct: 783 EGREGFVYRLYKALYGLKQAPRAWYNKIDSYFAETGFERSKSEPTLYIKKQGAGDILVVC 842
Query: 4244 VYVDDLIVTGDDENEIQRTRTNLSVRFQMKELGELNHFLGLEMDRTKEGIFLCQQKYARD 4423
+YVDD+I G + + + ++ +F+M +LG L FLGLE+ + ++G+F+ Q KYA D
Sbjct: 843 LYVDDMIYMGSSASLVSEFKASMMEKFEMTDLGLLYFFLGLEVKQVEDGVFVSQHKYACD 902
Query: 4424 LLHKFGMIDCKPISTPIEINSKL-CDEGKDLENATMYRQLVGSLIYLTLTRPDIAYAVGI 4600
LL +F M C + TP+ +N KL +G + +AT +R LVG LIYLT TRPDI +AV
Sbjct: 903 LLKRFDMAGCNAVETPMNVNEKLLAGDGTEKADATKFRSLVGGLIYLTHTRPDICFAVSA 962
Query: 4601 ASRFMEKPKKPHLEVVRQILRYVKGTIDYGLFYKKNKDCKVVGYCDADYAGCRDTRRSTT 4780
SRFM P K H +++LRY+ T +YGL+Y K+VG+ D+D+AGC R+ST+
Sbjct: 963 ISRFMHGPTKQHFGAAKRLLRYIARTAEYGLWYCSVSKFKLVGFTDSDWAGCVQDRKSTS 1022
Query: 4781 GYVFSLGSAAVSWCSKRQPTVSLSTXXXXXXXXXXXXXXSTWLMQLMADLYQPVSYATQL 4960
G+VF+LGS AV W SK+Q +LS+ + WL +++AD+ Q AT +
Sbjct: 1023 GHVFNLGSGAVCWSSKKQNVTALSSSEAEYTAATAAACQAVWLRRILADIKQEQEKATTI 1082
Query: 4961 YCDNQSAIRIAENPVCHARTKHVEVHYHFVREKVLKGEIDLKHINTEEQVADVLTKGLSA 5140
+CDN++ I + +NP H RTKH+ + HF+R+ V +G + L++ +T EQ ADVLTK LS
Sbjct: 1083 FCDNKATIAMNKNPAYHGRTKHISIKVHFIRDLVSEGSVTLEYCSTNEQSADVLTKALSR 1142
Query: 5141 SKFEGFRTQLGIMRRKELNQI 5203
+KF+ FR++LG+ + + + +
Sbjct: 1143 NKFDYFRSKLGVCKFESMESV 1163
>emb|CAN61322.1| hypothetical protein VITISV_012106 [Vitis vinifera]
Length = 1432
Score = 719 bits (1857), Expect = 0.0
Identities = 451/1411 (31%), Positives = 702/1411 (49%), Gaps = 48/1411 (3%)
Frame = +2
Query: 1097 KLNNQNYTTWQTCMESYLQGQDLWDVVGGSKVTPPEDAG------ALKKWKIKAGKTMFA 1258
KL+ NY W++ +++ + D + G+ + P +D A W+ + +
Sbjct: 39 KLDRTNYILWRSQIDNVIFANGFEDFIDGTSICPEKDLSPGVMNPAFVAWRRQDRTILSW 98
Query: 1259 IKTTIDEELLEYIRDKNTPKEAWDTFAALFSKKNDLRLQFLENELLSITQGEMTINQYFN 1438
I +++ ++ I NT AW+ ++FS + R+ L EL S +G M++ Y
Sbjct: 99 IYSSLTPGIMAQIIGHNTSHSAWNALESIFSSSSRARIMQLRLELQSTKKGSMSMIDYIM 158
Query: 1439 KVKSLCRXXXXXXXXXXXXXXRMRRIIIHGLRPEFRSFIAAIQGWPEQPSLINLENLLAD 1618
K+K M ++ GL ++ + + AI ++ SL + ++L
Sbjct: 159 KIKGAADNLAAIGEPVSEQDQVMN--LLGGLGSDYNAVVTAINIRDDKISLEAIHSMLLA 216
Query: 1619 QEALTKQMLGVSLKKEEEALFSYKK-----------KGRFPRQNNXXXXXXXFIEGSQTR 1765
E +Q + A S + +G P NN + + R
Sbjct: 217 FEHRLEQQSSIEQMSANYASSSNNRGGGRKFNGGRGQGYSPNNNN-------YTYRGRGR 269
Query: 1766 GAQENRDERGQLSNRYRRPNGSCFVCGKRGHYARDCRFRKKQA-EGNMATSNEQEKYNSE 1942
G + + R Q S+ +P C +CGK GH A+ C R + +G T + ++
Sbjct: 270 GGRNGQGGR-QNSSPSEKPQ--CQLCGKFGHTAQICYHRFDISFQGGQTTISHSLNNGNQ 326
Query: 1943 EEWDAEASIAVIEQTHEEVCSSSLEEKSALMAVVPGRIDYENDWIVDSGCSNHMTGDKEK 2122
A + A E W +DSG S+H+T +
Sbjct: 327 NNIPAMVASASNNPADES-------------------------WYLDSGASHHLTQNLGN 361
Query: 2123 LQNTAEYKGGRMVVTANNSRLPITHIGKTVITPRFSPSQVHLQDVYHVPGMKKNLLSVAQ 2302
L +T+ Y G V N L I++IG + L+ V+HVP + NL+SVA+
Sbjct: 362 LTSTSPYTGTDKVTIGNGKHLSISNIGSKQLHSH--THSFRLKKVFHVPFISANLISVAK 419
Query: 2303 LTSSGNYVL------FGPKDVK---VYQNVKISGT----PVMEGRR-LESIYVMSAESAY 2440
S N ++ F KD+ V K+ PV + SI SA +
Sbjct: 420 FCSENNALIEFHSNAFFVKDLHTKMVLAQGKLENGLYKFPVFSNLKPYSSINNASAFHSQ 479
Query: 2441 VDKTRKNETTDLWHARLGHVSYHXXXXXXXXXXXXXXPQLEIRDDMVCAGCQYGKAHQLP 2620
T +N+ +LWH RLGH S+ VC+ CQ K+H+LP
Sbjct: 480 FSSTVENKA-ELWHNRLGHASFDIVSKVMNTCNVASGKY----KSFVCSDCQLAKSHRLP 534
Query: 2621 YQESNYRAKQPLELIHSDLFGPVKQPSIRGMCYMVTFIDDFSRYVWVXXXXXXXXXXXXX 2800
Q SN+ A +PLEL+++D++GP S G Y + F+DD+SRY W
Sbjct: 535 TQLSNFHASKPLELVYTDIWGPASIKSTSGARYFILFVDDYSRYTWFYSLQTKDQALPIF 594
Query: 2801 XXXXXXXXXXXXXXIKCLRTDNGGEYTSGEFSQYLQEHKIHHQLTCPNTPQQNGVAERKN 2980
IKCL++DNGGE+ S F+ +LQ I H+ +CP QNG ERK+
Sbjct: 595 KXFKLQMENQFDTKIKCLQSDNGGEFRS--FTSFLQAVGIAHRFSCPYNSXQNGRVERKH 652
Query: 2981 RHLVETCRSMLHAKNVPGRF*AECMRTAAHVINRLPQPKLGFVSPFEKLWKIKPTVSHFR 3160
RH+VET ++L ++P ++ +T +INR+P L + SP+ L++ P FR
Sbjct: 653 RHVVETGLALLSHASLPMKYWHYAFQTXTFLINRMPSKVLEYDSPYFTLFRRHPDYKSFR 712
Query: 3161 VFGCVCYVFVPSHLRSKFDKKAIRCIFVGYDSQRKGWRCCDPTNDLCYTSRNVVFDETSS 3340
VFGC+CY F+ + K ++++C+F+GY KG+ C D Y + +VVFDE++
Sbjct: 713 VFGCLCYPFIRPYNTHKLQYRSVQCLFLGYSLNHKGFLCLDYATGRVYITPHVVFDESTF 772
Query: 3341 *WTPQRVELPDSKKIGDKLQEEIV----------EVQKSHEEIENSQESSDEEEPMRTTQ 3490
+ + + ++ + + SH I++ S+ E T+
Sbjct: 773 PLAQSKSSSSSNDTSAEGSTPALITPPSFPCLLPDSKISHASIDSHSLSTSESPIPTTSS 832
Query: 3491 GPWQTGVHQPTPEENRPIQQEEVEVPTSPQPQL-----RKSTRQRKPNPKYANAVVEEDE 3655
P T P + + + P+PQ+ R +TR + K +
Sbjct: 833 SPLDTSSSSPAID---------LSPKSVPEPQITALAPRMTTRSMRGITKKKTILDLSAI 883
Query: 3656 STKEPVTFEEAVQHKEWRKAMEEEIVALKQNETWDLMPIPDGAKPISCKWVYKVKRRLDG 3835
EP T ++A + W KAME EI AL +N TWDL+ P I CKWVYK+K + DG
Sbjct: 884 KVSEPSTLKQAFKDPNWTKAMEMEIAALHRNHTWDLVEQPPNVNVIGCKWVYKLKHKPDG 943
Query: 3836 SIERYKSRLVARGFSQQYGLDYDETFSPVAKITTVRMLIALATSKSWKLWQMDVKKAFLH 4015
SIERYK+RLVA+G++Q +GLDY ETFSPV K T+R+++ +A S W++ Q+DV AFL+
Sbjct: 944 SIERYKARLVAKGYNQTHGLDYFETFSPVVKAATIRIILTVALSFKWEIRQLDVHNAFLN 1003
Query: 4016 GELDRDIYMEQPKGFENKENPGHVCKLKKALYGLKQAPRAWYGKIAEFLVQCGYSVAPAD 4195
GEL+ +YM QP G+ + + P VC+LKKALYGLKQAPRAW+ +++ L+Q G+S++ D
Sbjct: 1004 GELEEQVYMSQPPGYFDPQFPNRVCRLKKALYGLKQAPRAWFQRLSSALLQWGFSMSRTD 1063
Query: 4196 SSLFVKTQHGKLAIVLVYVDDLIVTGDDENEIQRTRTNLSVRFQMKELGELNHFLGLEMD 4375
SS+F+ IVLVYVDD++VTG +I L F +++LG+L+ FLG+E+
Sbjct: 1064 SSMFLHFGKATTLIVLVYVDDILVTGSSSTQISSLIAKLDSVFALRDLGQLSFFLGIEVS 1123
Query: 4376 RTKEGIFLCQQKYARDLLHKFGMIDCKPISTPIEINSKLCD-EGKDLENATMYRQLVGSL 4552
+ + L Q KY DLLH+ + D KP +TP + L +G + + T YR +VG+L
Sbjct: 1124 YNEGSMTLSQTKYISDLLHRTELFDTKPANTPGAVGKNLSKFDGDPMTDVTHYRSVVGAL 1183
Query: 4553 IYLTLTRPDIAYAVGIASRFMEKPKKPHLEVVRQILRYVKGTIDYGLFYKKNKDCKVVGY 4732
Y+TLTRPDIA+AV A +FM++P H V++ILRY++GT+ GL + + + + G+
Sbjct: 1184 QYVTLTRPDIAFAVNKACQFMQQPTTAHWLSVKRILRYLRGTMQDGLLFSPSSNLTIEGF 1243
Query: 4733 CDADYAGCRDTRRSTTGYVFSLGSAAVSWCSKRQPTVSLSTXXXXXXXXXXXXXXSTWLM 4912
DAD+ D RRS++GY+ LG VSW S +Q VS S+ W+
Sbjct: 1244 TDADWGAHLDDRRSSSGYLVYLGGNLVSWSSTKQKVVSRSSAESEYRGLVFATAEIVWMQ 1303
Query: 4913 QLMADLYQPVSYATQLYCDNQSAIRIAENPVCHARTKHVEVHYHFVREKVLKGEIDLKHI 5092
L+ +L P+ L+ DN SA +A+NPV HARTKH+E+ HF+R++V++G+I L+ +
Sbjct: 1304 ALLQELCVPIPAIPLLWYDNISAYHMAKNPVFHARTKHIEIDLHFIRDQVMRGKIQLQFV 1363
Query: 5093 NTEEQVADVLTKGLSASKFEGFRTQLGIMRR 5185
TEEQ D+LTK L++S+F ++QL I R
Sbjct: 1364 PTEEQPVDLLTKHLTSSRFLSLKSQLCIAPR 1394