BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Forsythia21_contig00021162
         (818 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABG21864.1| retrotransposon protein, putative, Ty1-copia subc...   102   3e-32
gb|AAX92828.1| retrotransposon protein, putative, Ty1-copia sub-...    92   1e-29
gb|AAT58810.1| putative polyprotein [Oryza sativa Japonica Group]      91   2e-29
emb|CAE04541.2| OSJNBa0040D17.9 [Oryza sativa Japonica Group]          91   2e-29
gb|AAT38001.1| Putative polyprotein [Oryza sativa Japonica Group]      91   2e-29
gb|AAT93940.1| putative polyprotein [Oryza sativa Japonica Group]      91   3e-29
gb|AAT44162.1| putative polyprotein [Oryza sativa Japonica Group]      91   4e-29
gb|EEC80481.1| hypothetical protein OsI_22711 [Oryza sativa Indi...    89   4e-29
gb|AAN61480.1| Putative polyprotein from transposon TNT [Oryza s...    90   5e-29
gb|ABF98943.1| retrotransposon protein, putative, unclassified, ...    90   5e-29
gb|AAU44026.2| putative polyprotein [Oryza sativa Japonica Group]      90   5e-29
gb|ABA98555.1| retrotransposon protein, putative, Ty1-copia subc...    91   5e-29
gb|ABA97938.1| retrotransposon protein, putative, Ty1-copia subc...    90   5e-29
gb|ABA91250.1| retrotransposon protein, putative, Ty1-copia subc...    90   5e-29
gb|AAX96832.1| retrotransposon protein, putative, Ty1-copia sub-...    90   5e-29
emb|CAE03086.1| OSJNBa0017B10.1 [Oryza sativa Japonica Group] gi...    90   5e-29
gb|AAP54573.2| retrotransposon protein, putative, Ty1-copia subc...    90   5e-29
gb|ABF98853.1| retrotransposon protein, putative, Ty1-copia subc...    90   5e-29
gb|AAT77367.1| putative polyprotein [Oryza sativa Japonica Group...    90   5e-29
gb|AAT69606.1| putative polyprotein [Oryza sativa Japonica Group...    90   5e-29

>gb|ABG21864.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1297

 Score =  102 bits (255), Expect(3) = 3e-32
 Identities = 54/134 (40%), Positives = 76/134 (56%), Gaps = 1/134 (0%)
 Frame = -2

Query: 667 KDKGKREPK-PCFVCGRTNHVVQECYFRKTKEYKPKSKS*KDQVNMLEDGELSIRCESLI 491
           K KGK + K  CFVCG++ H  ++C         P+ K  K    ++ +G  +     ++
Sbjct: 305 KKKGKGKAKGDCFVCGKSGHWAKDC---------PERKDRKSANMVISEGGGTSGYGKML 355

Query: 490 SLVNFTYKSNDWWLDSGANIHVCFDKSLFKSYHTSSGGSVTLENDMIARVLGIGRIELKM 311
             V   Y S DWW+D+GANIH+C D SLF SY    G S+ + N  +A V G+G ++LK 
Sbjct: 356 PTVLSVYHSPDWWVDTGANIHICADISLFSSYQVGRGSSLLMGNGSLAAVHGVGTVDLKF 415

Query: 310 TSGKTLVLDQVQHV 269
           TSGKT+ L  VQHV
Sbjct: 416 TSGKTVQLKNVQHV 429



 Score = 63.5 bits (153), Expect(3) = 3e-32
 Identities = 28/61 (45%), Positives = 44/61 (72%)
 Frame = -3

Query: 267 LKLDQVRHIPEVRRNLVSGSYLIQRGFKVVIEWNKIVITKNDVFIGKSYISDGLFKLNVV 88
           ++L  V+H+P +++NLVSGS L + GF++V E NK V++K   F+GK Y S GLF+ ++ 
Sbjct: 421 VQLKNVQHVPLIKKNLVSGSLLCREGFRLVFESNKCVVSKYGTFVGKCYDSGGLFRFSLN 480

Query: 87  D 85
           D
Sbjct: 481 D 481



 Score = 20.8 bits (42), Expect(3) = 3e-32
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = -1

Query: 56  ESSCLWHKRLGHVS 15
           + S +WH RL HV+
Sbjct: 496 DESNVWHSRLCHVN 509


>gb|AAX92828.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza
           sativa Japonica Group] gi|62733724|gb|AAX95834.1|
           retrotransposon protein, putative, Ty1-copia sub-class
           [Oryza sativa Japonica Group] gi|77550359|gb|ABA93156.1|
           retrotransposon protein, putative, Ty1-copia subclass
           [Oryza sativa Japonica Group]
          Length = 1277

 Score = 92.0 bits (227), Expect(2) = 1e-29
 Identities = 49/136 (36%), Positives = 74/136 (54%)
 Frame = -2

Query: 676 RDGKDKGKREPKPCFVCGRTNHVVQECYFRKTKEYKPKSKS*KDQVNMLEDGELSIRCES 497
           +  K+   ++ + CFVCG+  H+ ++C  RK  +      S    V +   G+ S     
Sbjct: 229 KKNKNNPNQDERTCFVCGQVGHLARKCPQRKGMKAPAGQTSKSANVTIGNTGDGS--GYG 286

Query: 496 LISLVNFTYKSNDWWLDSGANIHVCFDKSLFKSYHTSSGGSVTLENDMIARVLGIGRIEL 317
            +  V    +S +WW+D+GAN+HVC D SLF SY  + G +V + N   A V G+G ++L
Sbjct: 287 NLPTVFSVNQSTNWWVDTGANVHVCADISLFSSYQVARGSTVLMGNGSHASVHGVGTVDL 346

Query: 316 KMTSGKTLVLDQVQHV 269
           K TSGK + L  VQHV
Sbjct: 347 KFTSGKIVQLKNVQHV 362



 Score = 65.9 bits (159), Expect(2) = 1e-29
 Identities = 30/61 (49%), Positives = 44/61 (72%)
 Frame = -3

Query: 267 LKLDQVRHIPEVRRNLVSGSYLIQRGFKVVIEWNKIVITKNDVFIGKSYISDGLFKLNVV 88
           ++L  V+H+P + RNLVSGS L + GFK+V E NK+V++K+  FIGK Y   GLF+ ++ 
Sbjct: 354 VQLKNVQHVPSIDRNLVSGSRLTRDGFKLVFESNKVVVSKHGYFIGKGYECGGLFRFSLS 413

Query: 87  D 85
           D
Sbjct: 414 D 414


>gb|AAT58810.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1320

 Score = 91.3 bits (225), Expect(2) = 2e-29
 Identities = 49/130 (37%), Positives = 74/130 (56%), Gaps = 2/130 (1%)
 Frame = -2

Query: 652 REPKPCFVCGRTNHVVQECYFRKTKEYKP--KSKS*KDQVNMLEDGELSIRCESLISLVN 479
           ++ + CFVCG+  H+ ++C  RK  +      SKS    +  + DG       ++ S+  
Sbjct: 237 QDERTCFVCGQVGHLARKCPQRKGMKAPAGQTSKSANVTIGNIGDGSGYGNLPTVFSV-- 294

Query: 478 FTYKSNDWWLDSGANIHVCFDKSLFKSYHTSSGGSVTLENDMIARVLGIGRIELKMTSGK 299
              +S +WW+D+GAN+HVC D SLF SY  + G +V + N   A V G+G ++LK TSGK
Sbjct: 295 --NQSTNWWVDTGANVHVCADISLFSSYQVARGSTVLMGNGSHASVHGVGTVDLKFTSGK 352

Query: 298 TLVLDQVQHV 269
            + L  VQHV
Sbjct: 353 IVQLKNVQHV 362



 Score = 65.9 bits (159), Expect(2) = 2e-29
 Identities = 30/61 (49%), Positives = 44/61 (72%)
 Frame = -3

Query: 267 LKLDQVRHIPEVRRNLVSGSYLIQRGFKVVIEWNKIVITKNDVFIGKSYISDGLFKLNVV 88
           ++L  V+H+P + RNLVSGS L + GFK+V E NK+V++K+  FIGK Y   GLF+ ++ 
Sbjct: 354 VQLKNVQHVPSIDRNLVSGSRLTRDGFKLVFESNKVVVSKHGYFIGKGYECGGLFRFSLS 413

Query: 87  D 85
           D
Sbjct: 414 D 414


>emb|CAE04541.2| OSJNBa0040D17.9 [Oryza sativa Japonica Group]
          Length = 1319

 Score = 91.3 bits (225), Expect(2) = 2e-29
 Identities = 50/130 (38%), Positives = 73/130 (56%), Gaps = 2/130 (1%)
 Frame = -2

Query: 652 REPKPCFVCGRTNHVVQECYFRKTKEYKP--KSKS*KDQVNMLEDGELSIRCESLISLVN 479
           ++ + CFVCG+  H+ ++C  RK  +      SKS    +    DG       S+ S+  
Sbjct: 237 QDERTCFVCGQVGHLARKCPQRKGMKAPAGQTSKSANVTIGNTGDGSGYGNLPSVFSV-- 294

Query: 478 FTYKSNDWWLDSGANIHVCFDKSLFKSYHTSSGGSVTLENDMIARVLGIGRIELKMTSGK 299
              +S +WW+D+GAN+HVC D SLF SY  + G +V + N   A V G+G ++LK TSGK
Sbjct: 295 --NQSTNWWVDTGANVHVCADISLFSSYQVARGSTVLMGNGSHASVHGVGTVDLKFTSGK 352

Query: 298 TLVLDQVQHV 269
            + L  VQHV
Sbjct: 353 IVQLKNVQHV 362



 Score = 65.9 bits (159), Expect(2) = 2e-29
 Identities = 30/61 (49%), Positives = 44/61 (72%)
 Frame = -3

Query: 267 LKLDQVRHIPEVRRNLVSGSYLIQRGFKVVIEWNKIVITKNDVFIGKSYISDGLFKLNVV 88
           ++L  V+H+P + RNLVSGS L + GFK+V E NK+V++K+  FIGK Y   GLF+ ++ 
Sbjct: 354 VQLKNVQHVPSIDRNLVSGSRLTRDGFKLVFESNKVVVSKHGYFIGKGYECGGLFRFSLS 413

Query: 87  D 85
           D
Sbjct: 414 D 414


>gb|AAT38001.1| Putative polyprotein [Oryza sativa Japonica Group]
          Length = 1297

 Score = 91.3 bits (225), Expect(2) = 2e-29
 Identities = 49/130 (37%), Positives = 74/130 (56%), Gaps = 2/130 (1%)
 Frame = -2

Query: 652 REPKPCFVCGRTNHVVQECYFRKTKEYKP--KSKS*KDQVNMLEDGELSIRCESLISLVN 479
           ++ + CFVCG+  H+ ++C  RK  +      SKS    +  + DG       ++ S+  
Sbjct: 237 QDERTCFVCGQVGHLARKCPQRKGMKAPAGQTSKSANVTIGNIGDGSGYGNLPTVFSV-- 294

Query: 478 FTYKSNDWWLDSGANIHVCFDKSLFKSYHTSSGGSVTLENDMIARVLGIGRIELKMTSGK 299
              +S +WW+D+GAN+HVC D SLF SY  + G +V + N   A V G+G ++LK TSGK
Sbjct: 295 --NQSTNWWVDTGANVHVCADISLFSSYQVARGSTVLMGNGSHASVHGVGTVDLKFTSGK 352

Query: 298 TLVLDQVQHV 269
            + L  VQHV
Sbjct: 353 IVQLKNVQHV 362



 Score = 65.9 bits (159), Expect(2) = 2e-29
 Identities = 30/61 (49%), Positives = 44/61 (72%)
 Frame = -3

Query: 267 LKLDQVRHIPEVRRNLVSGSYLIQRGFKVVIEWNKIVITKNDVFIGKSYISDGLFKLNVV 88
           ++L  V+H+P + RNLVSGS L + GFK+V E NK+V++K+  FIGK Y   GLF+ ++ 
Sbjct: 354 VQLKNVQHVPSIDRNLVSGSRLTRDGFKLVFESNKVVVSKHGYFIGKGYECGGLFRFSLS 413

Query: 87  D 85
           D
Sbjct: 414 D 414


>gb|AAT93940.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1861

 Score = 90.9 bits (224), Expect(2) = 3e-29
 Identities = 49/128 (38%), Positives = 71/128 (55%)
 Frame = -2

Query: 652  REPKPCFVCGRTNHVVQECYFRKTKEYKPKSKS*KDQVNMLEDGELSIRCESLISLVNFT 473
            ++ + CFVCG+  H+ ++C  RK  +      S    V +   G+ S      +  V   
Sbjct: 651  QDERTCFVCGQVGHLARKCPQRKGMKAPAGQTSKSANVTIGNTGDGS--GYGNLPTVFSV 708

Query: 472  YKSNDWWLDSGANIHVCFDKSLFKSYHTSSGGSVTLENDMIARVLGIGRIELKMTSGKTL 293
             +S +WW+D+GANIHVC D SLF SY  + G +V + N   A V G+G ++LK TSGK +
Sbjct: 709  NQSTNWWIDTGANIHVCADISLFSSYQVARGSTVLMGNGSHASVHGVGTVDLKFTSGKIV 768

Query: 292  VLDQVQHV 269
             L  VQHV
Sbjct: 769  QLKNVQHV 776



 Score = 65.9 bits (159), Expect(2) = 3e-29
 Identities = 30/61 (49%), Positives = 44/61 (72%)
 Frame = -3

Query: 267 LKLDQVRHIPEVRRNLVSGSYLIQRGFKVVIEWNKIVITKNDVFIGKSYISDGLFKLNVV 88
           ++L  V+H+P + RNLVSGS L + GFK+V E NK+V++K+  FIGK Y   GLF+ ++ 
Sbjct: 768 VQLKNVQHVPSIDRNLVSGSRLTRDGFKLVFESNKVVVSKHGYFIGKGYECGGLFRFSLS 827

Query: 87  D 85
           D
Sbjct: 828 D 828


>gb|AAT44162.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1302

 Score = 90.5 bits (223), Expect(2) = 4e-29
 Identities = 48/128 (37%), Positives = 71/128 (55%)
 Frame = -2

Query: 652 REPKPCFVCGRTNHVVQECYFRKTKEYKPKSKS*KDQVNMLEDGELSIRCESLISLVNFT 473
           ++ + CFVCG+  H+ ++C  RK  +      S    V +   G+ S      +  V   
Sbjct: 237 QDERTCFVCGQVGHLARKCSQRKGMKAPAGQTSKSANVTIGNTGDGS--GYGNLPTVFSV 294

Query: 472 YKSNDWWLDSGANIHVCFDKSLFKSYHTSSGGSVTLENDMIARVLGIGRIELKMTSGKTL 293
            +S +WW+D+GAN+HVC D SLF SY  + G +V + N   A V G+G ++LK TSGK +
Sbjct: 295 NQSTNWWVDTGANVHVCADISLFSSYQVARGSTVLMGNGSHASVHGVGTVDLKFTSGKIV 354

Query: 292 VLDQVQHV 269
            L  VQHV
Sbjct: 355 QLKNVQHV 362



 Score = 65.9 bits (159), Expect(2) = 4e-29
 Identities = 30/61 (49%), Positives = 44/61 (72%)
 Frame = -3

Query: 267 LKLDQVRHIPEVRRNLVSGSYLIQRGFKVVIEWNKIVITKNDVFIGKSYISDGLFKLNVV 88
           ++L  V+H+P + RNLVSGS L + GFK+V E NK+V++K+  FIGK Y   GLF+ ++ 
Sbjct: 354 VQLKNVQHVPSIDRNLVSGSRLTRDGFKLVFESNKVVVSKHGYFIGKGYECGGLFRFSLS 413

Query: 87  D 85
           D
Sbjct: 414 D 414


>gb|EEC80481.1| hypothetical protein OsI_22711 [Oryza sativa Indica Group]
          Length = 360

 Score = 89.0 bits (219), Expect(2) = 4e-29
 Identities = 49/138 (35%), Positives = 75/138 (54%), Gaps = 2/138 (1%)
 Frame = -2

Query: 676 RDGKDKGKREPKPCFVCGRTNHVVQECYFRKTKEYKP--KSKS*KDQVNMLEDGELSIRC 503
           ++  +   ++ + CFVCG+  H+ ++C  RK  +      SKS    +    DG      
Sbjct: 99  KNNNNNPNQDERTCFVCGQPGHLARKCPQRKGMKAPAGQTSKSANVTIGNTGDGSGYGNL 158

Query: 502 ESLISLVNFTYKSNDWWLDSGANIHVCFDKSLFKSYHTSSGGSVTLENDMIARVLGIGRI 323
            ++ S+     +S +WW+D+GANIHVC D SLF SY  + G +V + N     V G+G +
Sbjct: 159 PTIFSV----NQSTNWWVDTGANIHVCADISLFSSYQVARGSTVLMGNGSHLYVHGVGTV 214

Query: 322 ELKMTSGKTLVLDQVQHV 269
           +LK TSGK + L  VQHV
Sbjct: 215 DLKFTSGKIVQLKNVQHV 232



 Score = 67.4 bits (163), Expect(2) = 4e-29
 Identities = 31/61 (50%), Positives = 45/61 (73%)
 Frame = -3

Query: 267 LKLDQVRHIPEVRRNLVSGSYLIQRGFKVVIEWNKIVITKNDVFIGKSYISDGLFKLNVV 88
           ++L  V+H+P + RNLVSGS L + GFK+V E NK+V++K+  FIGK Y S GLF+ ++ 
Sbjct: 224 VQLKNVQHVPSIDRNLVSGSRLTRDGFKLVFESNKVVVSKHRYFIGKGYESGGLFRFSLS 283

Query: 87  D 85
           D
Sbjct: 284 D 284


>gb|AAN61480.1| Putative polyprotein from transposon TNT [Oryza sativa Japonica
           Group]
          Length = 1911

 Score = 90.1 bits (222), Expect(2) = 5e-29
 Identities = 48/128 (37%), Positives = 71/128 (55%)
 Frame = -2

Query: 652 REPKPCFVCGRTNHVVQECYFRKTKEYKPKSKS*KDQVNMLEDGELSIRCESLISLVNFT 473
           ++ + CFVCG+  H+ ++C  RK  +      S    V +   G+ S      +  V   
Sbjct: 237 QDERTCFVCGQVGHLARKCPQRKGMKAPAGQTSKSANVTIGNTGDGS--GYGNLPTVFSV 294

Query: 472 YKSNDWWLDSGANIHVCFDKSLFKSYHTSSGGSVTLENDMIARVLGIGRIELKMTSGKTL 293
            +S +WW+D+GAN+HVC D SLF SY  + G +V + N   A V G+G ++LK TSGK +
Sbjct: 295 NQSTNWWVDTGANVHVCADISLFSSYQVARGSTVLMGNGSHASVHGVGTVDLKFTSGKIV 354

Query: 292 VLDQVQHV 269
            L  VQHV
Sbjct: 355 QLKNVQHV 362



 Score = 65.9 bits (159), Expect(2) = 5e-29
 Identities = 30/61 (49%), Positives = 44/61 (72%)
 Frame = -3

Query: 267 LKLDQVRHIPEVRRNLVSGSYLIQRGFKVVIEWNKIVITKNDVFIGKSYISDGLFKLNVV 88
           ++L  V+H+P + RNLVSGS L + GFK+V E NK+V++K+  FIGK Y   GLF+ ++ 
Sbjct: 354 VQLKNVQHVPSIDRNLVSGSRLTRDGFKLVFESNKVVVSKHGYFIGKGYECGGLFRFSLS 413

Query: 87  D 85
           D
Sbjct: 414 D 414


>gb|ABF98943.1| retrotransposon protein, putative, unclassified, expressed [Oryza
           sativa Japonica Group]
          Length = 1460

 Score = 90.1 bits (222), Expect(2) = 5e-29
 Identities = 48/128 (37%), Positives = 71/128 (55%)
 Frame = -2

Query: 652 REPKPCFVCGRTNHVVQECYFRKTKEYKPKSKS*KDQVNMLEDGELSIRCESLISLVNFT 473
           ++ + CFVCG+  H+ ++C  RK  +      S    V +   G+ S      +  V   
Sbjct: 237 QDERTCFVCGQVGHLARKCPQRKGMKAPAGQTSKSANVTIGNTGDGS--GYGNLPTVFSV 294

Query: 472 YKSNDWWLDSGANIHVCFDKSLFKSYHTSSGGSVTLENDMIARVLGIGRIELKMTSGKTL 293
            +S +WW+D+GAN+HVC D SLF SY  + G +V + N   A V G+G ++LK TSGK +
Sbjct: 295 NQSTNWWVDTGANVHVCADISLFSSYQVARGSTVLMGNGSHASVHGVGTVDLKFTSGKIV 354

Query: 292 VLDQVQHV 269
            L  VQHV
Sbjct: 355 QLKNVQHV 362



 Score = 65.9 bits (159), Expect(2) = 5e-29
 Identities = 30/61 (49%), Positives = 44/61 (72%)
 Frame = -3

Query: 267 LKLDQVRHIPEVRRNLVSGSYLIQRGFKVVIEWNKIVITKNDVFIGKSYISDGLFKLNVV 88
           ++L  V+H+P + RNLVSGS L + GFK+V E NK+V++K+  FIGK Y   GLF+ ++ 
Sbjct: 354 VQLKNVQHVPSIDRNLVSGSRLTRDGFKLVFESNKVVVSKHGYFIGKGYECGGLFRFSLS 413

Query: 87  D 85
           D
Sbjct: 414 D 414


>gb|AAU44026.2| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1391

 Score = 90.1 bits (222), Expect(2) = 5e-29
 Identities = 48/128 (37%), Positives = 71/128 (55%)
 Frame = -2

Query: 652 REPKPCFVCGRTNHVVQECYFRKTKEYKPKSKS*KDQVNMLEDGELSIRCESLISLVNFT 473
           ++ + CFVCG+  H+ ++C  RK  +      S    V +   G+ S      +  V   
Sbjct: 326 QDERTCFVCGQVGHLARKCPQRKGMKAPAGQTSKSANVTIGNTGDGS--GYGNLPTVFSV 383

Query: 472 YKSNDWWLDSGANIHVCFDKSLFKSYHTSSGGSVTLENDMIARVLGIGRIELKMTSGKTL 293
            +S +WW+D+GAN+HVC D SLF SY  + G +V + N   A V G+G ++LK TSGK +
Sbjct: 384 NQSTNWWVDTGANVHVCADISLFSSYQVARGSTVLMGNGSHASVHGVGTVDLKFTSGKIV 443

Query: 292 VLDQVQHV 269
            L  VQHV
Sbjct: 444 QLKNVQHV 451



 Score = 65.9 bits (159), Expect(2) = 5e-29
 Identities = 30/61 (49%), Positives = 44/61 (72%)
 Frame = -3

Query: 267 LKLDQVRHIPEVRRNLVSGSYLIQRGFKVVIEWNKIVITKNDVFIGKSYISDGLFKLNVV 88
           ++L  V+H+P + RNLVSGS L + GFK+V E NK+V++K+  FIGK Y   GLF+ ++ 
Sbjct: 443 VQLKNVQHVPSIDRNLVSGSRLTRDGFKLVFESNKVVVSKHGYFIGKGYECGGLFRFSLS 502

Query: 87  D 85
           D
Sbjct: 503 D 503


>gb|ABA98555.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1361

 Score = 90.9 bits (224), Expect(2) = 5e-29
 Identities = 49/130 (37%), Positives = 74/130 (56%), Gaps = 2/130 (1%)
 Frame = -2

Query: 652 REPKPCFVCGRTNHVVQECYFRKTKEYKP--KSKS*KDQVNMLEDGELSIRCESLISLVN 479
           ++ + CFVCG+  H+ ++C  RK  +      SKS    +  + DG       ++ S+  
Sbjct: 322 QDERTCFVCGQVGHLARKCPQRKGMKAPAGQTSKSADVTIGNIGDGSGYGNLPTVFSV-- 379

Query: 478 FTYKSNDWWLDSGANIHVCFDKSLFKSYHTSSGGSVTLENDMIARVLGIGRIELKMTSGK 299
              +S +WW+D+GAN+HVC D SLF SY  + G +V + N   A V G+G ++LK TSGK
Sbjct: 380 --NQSTNWWVDTGANVHVCADISLFSSYQVARGSTVLMGNGSHASVHGVGTVDLKFTSGK 437

Query: 298 TLVLDQVQHV 269
            + L  VQHV
Sbjct: 438 IVQLKNVQHV 447



 Score = 65.1 bits (157), Expect(2) = 5e-29
 Identities = 30/61 (49%), Positives = 44/61 (72%)
 Frame = -3

Query: 267 LKLDQVRHIPEVRRNLVSGSYLIQRGFKVVIEWNKIVITKNDVFIGKSYISDGLFKLNVV 88
           ++L  V+H+P + RNLVS S LI+ GFK+V E NK+V++K+  FIGK Y   GLF+ ++ 
Sbjct: 439 VQLKNVQHVPSIDRNLVSDSRLIRDGFKLVFESNKVVVSKHGYFIGKGYECGGLFRFSLS 498

Query: 87  D 85
           D
Sbjct: 499 D 499


>gb|ABA97938.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1320

 Score = 90.1 bits (222), Expect(2) = 5e-29
 Identities = 48/128 (37%), Positives = 71/128 (55%)
 Frame = -2

Query: 652 REPKPCFVCGRTNHVVQECYFRKTKEYKPKSKS*KDQVNMLEDGELSIRCESLISLVNFT 473
           ++ + CFVCG+  H+ ++C  RK  +      S    V +   G+ S      +  V   
Sbjct: 237 QDERTCFVCGQVGHLARKCPQRKGMKAPAGQTSKSANVTIGNTGDGS--GYGNLPTVFSV 294

Query: 472 YKSNDWWLDSGANIHVCFDKSLFKSYHTSSGGSVTLENDMIARVLGIGRIELKMTSGKTL 293
            +S +WW+D+GAN+HVC D SLF SY  + G +V + N   A V G+G ++LK TSGK +
Sbjct: 295 NQSTNWWVDTGANVHVCADISLFSSYQVARGSTVLMGNGSHASVHGVGTVDLKFTSGKIV 354

Query: 292 VLDQVQHV 269
            L  VQHV
Sbjct: 355 QLKNVQHV 362



 Score = 65.9 bits (159), Expect(2) = 5e-29
 Identities = 30/61 (49%), Positives = 44/61 (72%)
 Frame = -3

Query: 267 LKLDQVRHIPEVRRNLVSGSYLIQRGFKVVIEWNKIVITKNDVFIGKSYISDGLFKLNVV 88
           ++L  V+H+P + RNLVSGS L + GFK+V E NK+V++K+  FIGK Y   GLF+ ++ 
Sbjct: 354 VQLKNVQHVPSIDRNLVSGSRLTRDGFKLVFESNKVVVSKHGYFIGKGYECGGLFRFSLS 413

Query: 87  D 85
           D
Sbjct: 414 D 414


>gb|ABA91250.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1320

 Score = 90.1 bits (222), Expect(2) = 5e-29
 Identities = 48/128 (37%), Positives = 71/128 (55%)
 Frame = -2

Query: 652 REPKPCFVCGRTNHVVQECYFRKTKEYKPKSKS*KDQVNMLEDGELSIRCESLISLVNFT 473
           ++ + CFVCG+  H+ ++C  RK  +      S    V +   G+ S      +  V   
Sbjct: 237 QDERTCFVCGQVGHLARKCPQRKGMKAPAGQTSKSANVTIGNTGDGS--GYGNLPTVFSV 294

Query: 472 YKSNDWWLDSGANIHVCFDKSLFKSYHTSSGGSVTLENDMIARVLGIGRIELKMTSGKTL 293
            +S +WW+D+GAN+HVC D SLF SY  + G +V + N   A V G+G ++LK TSGK +
Sbjct: 295 NQSTNWWVDTGANVHVCADISLFSSYQVARGSTVLMGNGSHASVHGVGTVDLKFTSGKIV 354

Query: 292 VLDQVQHV 269
            L  VQHV
Sbjct: 355 QLKNVQHV 362



 Score = 65.9 bits (159), Expect(2) = 5e-29
 Identities = 30/61 (49%), Positives = 44/61 (72%)
 Frame = -3

Query: 267 LKLDQVRHIPEVRRNLVSGSYLIQRGFKVVIEWNKIVITKNDVFIGKSYISDGLFKLNVV 88
           ++L  V+H+P + RNLVSGS L + GFK+V E NK+V++K+  FIGK Y   GLF+ ++ 
Sbjct: 354 VQLKNVQHVPSIDRNLVSGSRLTRDGFKLVFESNKVVVSKHGYFIGKGYECGGLFRFSLS 413

Query: 87  D 85
           D
Sbjct: 414 D 414


>gb|AAX96832.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza
           sativa Japonica Group]
          Length = 1320

 Score = 90.1 bits (222), Expect(2) = 5e-29
 Identities = 48/128 (37%), Positives = 71/128 (55%)
 Frame = -2

Query: 652 REPKPCFVCGRTNHVVQECYFRKTKEYKPKSKS*KDQVNMLEDGELSIRCESLISLVNFT 473
           ++ + CFVCG+  H+ ++C  RK  +      S    V +   G+ S      +  V   
Sbjct: 237 QDERTCFVCGQVGHLARKCPQRKGMKAPAGQTSKSANVTIGNTGDGS--GYGNLPTVFSV 294

Query: 472 YKSNDWWLDSGANIHVCFDKSLFKSYHTSSGGSVTLENDMIARVLGIGRIELKMTSGKTL 293
            +S +WW+D+GAN+HVC D SLF SY  + G +V + N   A V G+G ++LK TSGK +
Sbjct: 295 NQSTNWWVDTGANVHVCADISLFSSYQVARGSTVLMGNGSHASVHGVGTVDLKFTSGKIV 354

Query: 292 VLDQVQHV 269
            L  VQHV
Sbjct: 355 QLKNVQHV 362



 Score = 65.9 bits (159), Expect(2) = 5e-29
 Identities = 30/61 (49%), Positives = 44/61 (72%)
 Frame = -3

Query: 267 LKLDQVRHIPEVRRNLVSGSYLIQRGFKVVIEWNKIVITKNDVFIGKSYISDGLFKLNVV 88
           ++L  V+H+P + RNLVSGS L + GFK+V E NK+V++K+  FIGK Y   GLF+ ++ 
Sbjct: 354 VQLKNVQHVPSIDRNLVSGSRLTRDGFKLVFESNKVVVSKHGYFIGKGYECGGLFRFSLS 413

Query: 87  D 85
           D
Sbjct: 414 D 414


>emb|CAE03086.1| OSJNBa0017B10.1 [Oryza sativa Japonica Group]
           gi|38345937|emb|CAD41412.2| OSJNBb0078D11.12 [Oryza
           sativa Japonica Group]
          Length = 1320

 Score = 90.1 bits (222), Expect(2) = 5e-29
 Identities = 48/128 (37%), Positives = 71/128 (55%)
 Frame = -2

Query: 652 REPKPCFVCGRTNHVVQECYFRKTKEYKPKSKS*KDQVNMLEDGELSIRCESLISLVNFT 473
           ++ + CFVCG+  H+ ++C  RK  +      S    V +   G+ S      +  V   
Sbjct: 237 QDERTCFVCGQVGHLARKCPQRKGMKAPAGQTSKSANVTIGNTGDGS--GYGNLPTVFSV 294

Query: 472 YKSNDWWLDSGANIHVCFDKSLFKSYHTSSGGSVTLENDMIARVLGIGRIELKMTSGKTL 293
            +S +WW+D+GAN+HVC D SLF SY  + G +V + N   A V G+G ++LK TSGK +
Sbjct: 295 NQSTNWWVDTGANVHVCADISLFSSYQVARGSTVLMGNGSHASVHGVGTVDLKFTSGKIV 354

Query: 292 VLDQVQHV 269
            L  VQHV
Sbjct: 355 QLKNVQHV 362



 Score = 65.9 bits (159), Expect(2) = 5e-29
 Identities = 30/61 (49%), Positives = 44/61 (72%)
 Frame = -3

Query: 267 LKLDQVRHIPEVRRNLVSGSYLIQRGFKVVIEWNKIVITKNDVFIGKSYISDGLFKLNVV 88
           ++L  V+H+P + RNLVSGS L + GFK+V E NK+V++K+  FIGK Y   GLF+ ++ 
Sbjct: 354 VQLKNVQHVPSIDRNLVSGSRLTRDGFKLVFESNKVVVSKHGYFIGKGYECGGLFRFSLS 413

Query: 87  D 85
           D
Sbjct: 414 D 414


>gb|AAP54573.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1320

 Score = 90.1 bits (222), Expect(2) = 5e-29
 Identities = 48/128 (37%), Positives = 71/128 (55%)
 Frame = -2

Query: 652 REPKPCFVCGRTNHVVQECYFRKTKEYKPKSKS*KDQVNMLEDGELSIRCESLISLVNFT 473
           ++ + CFVCG+  H+ ++C  RK  +      S    V +   G+ S      +  V   
Sbjct: 237 QDERTCFVCGQVGHLARKCPQRKGMKAPAGQTSKSANVTIGNTGDGS--GYGNLPTVFSV 294

Query: 472 YKSNDWWLDSGANIHVCFDKSLFKSYHTSSGGSVTLENDMIARVLGIGRIELKMTSGKTL 293
            +S +WW+D+GAN+HVC D SLF SY  + G +V + N   A V G+G ++LK TSGK +
Sbjct: 295 NQSTNWWVDTGANVHVCADISLFSSYQVARGSTVLMGNGSHASVHGVGTVDLKFTSGKIV 354

Query: 292 VLDQVQHV 269
            L  VQHV
Sbjct: 355 QLKNVQHV 362



 Score = 65.9 bits (159), Expect(2) = 5e-29
 Identities = 30/61 (49%), Positives = 44/61 (72%)
 Frame = -3

Query: 267 LKLDQVRHIPEVRRNLVSGSYLIQRGFKVVIEWNKIVITKNDVFIGKSYISDGLFKLNVV 88
           ++L  V+H+P + RNLVSGS L + GFK+V E NK+V++K+  FIGK Y   GLF+ ++ 
Sbjct: 354 VQLKNVQHVPSIDRNLVSGSRLTRDGFKLVFESNKVVVSKHGYFIGKGYECGGLFRFSLS 413

Query: 87  D 85
           D
Sbjct: 414 D 414


>gb|ABF98853.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1320

 Score = 90.1 bits (222), Expect(2) = 5e-29
 Identities = 48/128 (37%), Positives = 71/128 (55%)
 Frame = -2

Query: 652 REPKPCFVCGRTNHVVQECYFRKTKEYKPKSKS*KDQVNMLEDGELSIRCESLISLVNFT 473
           ++ + CFVCG+  H+ ++C  RK  +      S    V +   G+ S      +  V   
Sbjct: 237 QDERTCFVCGQVGHLARKCPQRKGMKAPAGQTSKSANVTIGNTGDGS--GYGNLPTVFSV 294

Query: 472 YKSNDWWLDSGANIHVCFDKSLFKSYHTSSGGSVTLENDMIARVLGIGRIELKMTSGKTL 293
            +S +WW+D+GAN+HVC D SLF SY  + G +V + N   A V G+G ++LK TSGK +
Sbjct: 295 NQSTNWWVDTGANVHVCADISLFSSYQVARGSTVLMGNGSHASVHGVGTVDLKFTSGKIV 354

Query: 292 VLDQVQHV 269
            L  VQHV
Sbjct: 355 QLKNVQHV 362



 Score = 65.9 bits (159), Expect(2) = 5e-29
 Identities = 30/61 (49%), Positives = 44/61 (72%)
 Frame = -3

Query: 267 LKLDQVRHIPEVRRNLVSGSYLIQRGFKVVIEWNKIVITKNDVFIGKSYISDGLFKLNVV 88
           ++L  V+H+P + RNLVSGS L + GFK+V E NK+V++K+  FIGK Y   GLF+ ++ 
Sbjct: 354 VQLKNVQHVPSIDRNLVSGSRLTRDGFKLVFESNKVVVSKHGYFIGKGYECGGLFRFSLS 413

Query: 87  D 85
           D
Sbjct: 414 D 414


>gb|AAT77367.1| putative polyprotein [Oryza sativa Japonica Group]
           gi|51854387|gb|AAU10767.1| hypothetical protein [Oryza
           sativa Japonica Group]
          Length = 1320

 Score = 90.1 bits (222), Expect(2) = 5e-29
 Identities = 48/128 (37%), Positives = 71/128 (55%)
 Frame = -2

Query: 652 REPKPCFVCGRTNHVVQECYFRKTKEYKPKSKS*KDQVNMLEDGELSIRCESLISLVNFT 473
           ++ + CFVCG+  H+ ++C  RK  +      S    V +   G+ S      +  V   
Sbjct: 237 QDERTCFVCGQVGHLARKCPQRKGMKAPAGQTSKSANVTIGNTGDGS--GYGNLPTVFSV 294

Query: 472 YKSNDWWLDSGANIHVCFDKSLFKSYHTSSGGSVTLENDMIARVLGIGRIELKMTSGKTL 293
            +S +WW+D+GAN+HVC D SLF SY  + G +V + N   A V G+G ++LK TSGK +
Sbjct: 295 NQSTNWWVDTGANVHVCADISLFSSYQVARGSTVLMGNGSHASVHGVGTVDLKFTSGKIV 354

Query: 292 VLDQVQHV 269
            L  VQHV
Sbjct: 355 QLKNVQHV 362



 Score = 65.9 bits (159), Expect(2) = 5e-29
 Identities = 30/61 (49%), Positives = 44/61 (72%)
 Frame = -3

Query: 267 LKLDQVRHIPEVRRNLVSGSYLIQRGFKVVIEWNKIVITKNDVFIGKSYISDGLFKLNVV 88
           ++L  V+H+P + RNLVSGS L + GFK+V E NK+V++K+  FIGK Y   GLF+ ++ 
Sbjct: 354 VQLKNVQHVPSIDRNLVSGSRLTRDGFKLVFESNKVVVSKHGYFIGKGYECGGLFRFSLS 413

Query: 87  D 85
           D
Sbjct: 414 D 414


>gb|AAT69606.1| putative polyprotein [Oryza sativa Japonica Group]
           gi|53749238|gb|AAU90098.1| putative polyprotein [Oryza
           sativa Japonica Group]
          Length = 1320

 Score = 90.1 bits (222), Expect(2) = 5e-29
 Identities = 48/128 (37%), Positives = 71/128 (55%)
 Frame = -2

Query: 652 REPKPCFVCGRTNHVVQECYFRKTKEYKPKSKS*KDQVNMLEDGELSIRCESLISLVNFT 473
           ++ + CFVCG+  H+ ++C  RK  +      S    V +   G+ S      +  V   
Sbjct: 237 QDERTCFVCGQVGHLARKCPQRKGMKAPAGQTSKSANVTIGNTGDGS--GYGNLPTVFSV 294

Query: 472 YKSNDWWLDSGANIHVCFDKSLFKSYHTSSGGSVTLENDMIARVLGIGRIELKMTSGKTL 293
            +S +WW+D+GAN+HVC D SLF SY  + G +V + N   A V G+G ++LK TSGK +
Sbjct: 295 NQSTNWWVDTGANVHVCADISLFSSYQVARGSTVLMGNGSHASVHGVGTVDLKFTSGKIV 354

Query: 292 VLDQVQHV 269
            L  VQHV
Sbjct: 355 QLKNVQHV 362



 Score = 65.9 bits (159), Expect(2) = 5e-29
 Identities = 30/61 (49%), Positives = 44/61 (72%)
 Frame = -3

Query: 267 LKLDQVRHIPEVRRNLVSGSYLIQRGFKVVIEWNKIVITKNDVFIGKSYISDGLFKLNVV 88
           ++L  V+H+P + RNLVSGS L + GFK+V E NK+V++K+  FIGK Y   GLF+ ++ 
Sbjct: 354 VQLKNVQHVPSIDRNLVSGSRLTRDGFKLVFESNKVVVSKHGYFIGKGYECGGLFRFSLS 413

Query: 87  D 85
           D
Sbjct: 414 D 414