BLASTX nr result

ID: Forsythia21_contig00021144 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Forsythia21_contig00021144
         (300 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011099598.1| PREDICTED: splicing factor 3B subunit 4 isof...    88   2e-15
ref|XP_011099597.1| PREDICTED: splicing factor 3B subunit 4 isof...    88   2e-15
ref|XP_002516394.1| spliceosome associated protein, putative [Ri...    81   3e-13
ref|XP_003600696.1| Splicing factor 3B subunit [Medicago truncat...    81   3e-13
ref|XP_012855508.1| PREDICTED: splicing factor 3B subunit 4-like...    79   9e-13
ref|XP_012846517.1| PREDICTED: splicing factor 3B subunit 4-like...    79   9e-13
gb|EYU22327.1| hypothetical protein MIMGU_mgv1a0095012mg, partia...    79   9e-13
ref|XP_006383228.1| hypothetical protein POPTR_0005s12680g, part...    79   1e-12
ref|XP_012074483.1| PREDICTED: splicing factor 3B subunit 4-like...    78   2e-12
ref|XP_012074482.1| PREDICTED: splicing factor 3B subunit 4-like...    78   2e-12
ref|XP_012065463.1| PREDICTED: splicing factor 3B subunit 4-like...    78   3e-12
ref|XP_011025747.1| PREDICTED: splicing factor 3B subunit 4-like...    77   5e-12
ref|XP_002310211.2| hypothetical protein POPTR_0007s12570g [Popu...    77   5e-12
ref|XP_004503120.1| PREDICTED: splicing factor 3B subunit 4 [Cic...    76   8e-12
ref|XP_010942815.1| PREDICTED: splicing factor 3B subunit 4-like...    75   1e-11
ref|XP_006341534.1| PREDICTED: splicing factor 3B subunit 4-like...    75   1e-11
ref|XP_004235773.1| PREDICTED: splicing factor 3B subunit 4 [Sol...    75   1e-11
ref|XP_012456492.1| PREDICTED: splicing factor 3B subunit 4 [Gos...    75   2e-11
gb|KHG01547.1| Polyadenylate-binding, cytoplasmic and nuclear [G...    75   2e-11
ref|XP_006341070.1| PREDICTED: splicing factor 3B subunit 4-like...    75   2e-11

>ref|XP_011099598.1| PREDICTED: splicing factor 3B subunit 4 isoform X2 [Sesamum
           indicum]
          Length = 365

 Score = 88.2 bits (217), Expect = 2e-15
 Identities = 39/46 (84%), Positives = 40/46 (86%)
 Frame = +3

Query: 3   LAASNPTGQKNRPHTLFASGPPMLPPQPNGTVTAPVPPRPFANGGV 140
           LAASNP  QKNRPHT+FASGPP LPPQPNGTV AP PPRPFANG V
Sbjct: 204 LAASNPATQKNRPHTMFASGPPTLPPQPNGTVNAPAPPRPFANGSV 249


>ref|XP_011099597.1| PREDICTED: splicing factor 3B subunit 4 isoform X1 [Sesamum
           indicum]
          Length = 368

 Score = 88.2 bits (217), Expect = 2e-15
 Identities = 39/46 (84%), Positives = 40/46 (86%)
 Frame = +3

Query: 3   LAASNPTGQKNRPHTLFASGPPMLPPQPNGTVTAPVPPRPFANGGV 140
           LAASNP  QKNRPHT+FASGPP LPPQPNGTV AP PPRPFANG V
Sbjct: 207 LAASNPATQKNRPHTMFASGPPTLPPQPNGTVNAPAPPRPFANGSV 252


>ref|XP_002516394.1| spliceosome associated protein, putative [Ricinus communis]
           gi|223544492|gb|EEF46011.1| spliceosome associated
           protein, putative [Ricinus communis]
          Length = 376

 Score = 80.9 bits (198), Expect = 3e-13
 Identities = 39/48 (81%), Positives = 41/48 (85%), Gaps = 2/48 (4%)
 Frame = +3

Query: 3   LAASNPTGQKNRPHTLFASGPPMLP--PQPNGTVTAPVPPRPFANGGV 140
           LAASNP+ QK+RPHTLFASGPP LP  PQ NGTV APVPPRPFANG V
Sbjct: 207 LAASNPSSQKSRPHTLFASGPPTLPSIPQANGTVGAPVPPRPFANGAV 254


>ref|XP_003600696.1| Splicing factor 3B subunit [Medicago truncatula]
           gi|355489744|gb|AES70947.1| RNA-binding (RRM/RBD/RNP
           motif) family protein [Medicago truncatula]
          Length = 379

 Score = 80.9 bits (198), Expect = 3e-13
 Identities = 38/46 (82%), Positives = 40/46 (86%), Gaps = 2/46 (4%)
 Frame = +3

Query: 3   LAASNPTGQKNRPHTLFASGPPMLP--PQPNGTVTAPVPPRPFANG 134
           LAASNPT QK+RPHTLFASGPP LP  PQ NGT+ APVPPRPFANG
Sbjct: 207 LAASNPTAQKSRPHTLFASGPPSLPNAPQANGTIPAPVPPRPFANG 252


>ref|XP_012855508.1| PREDICTED: splicing factor 3B subunit 4-like [Erythranthe guttatus]
          Length = 370

 Score = 79.3 bits (194), Expect = 9e-13
 Identities = 37/47 (78%), Positives = 41/47 (87%), Gaps = 1/47 (2%)
 Frame = +3

Query: 3   LAASNPTGQKNRPHTLFASGPPMLPPQPNGTVTAPV-PPRPFANGGV 140
           LAASNPT Q++RPHT+FASGPP LPPQ NG V+APV PPRPFANG V
Sbjct: 215 LAASNPTTQRSRPHTMFASGPPTLPPQQNGAVSAPVAPPRPFANGSV 261


>ref|XP_012846517.1| PREDICTED: splicing factor 3B subunit 4-like [Erythranthe guttatus]
           gi|604318084|gb|EYU29755.1| hypothetical protein
           MIMGU_mgv1a008780mg [Erythranthe guttata]
          Length = 362

 Score = 79.3 bits (194), Expect = 9e-13
 Identities = 37/47 (78%), Positives = 41/47 (87%), Gaps = 1/47 (2%)
 Frame = +3

Query: 3   LAASNPTGQKNRPHTLFASGPPMLPPQPNGTVTAPV-PPRPFANGGV 140
           LAASNPT Q++RPHT+FASGPP LPPQ NG V+APV PPRPFANG V
Sbjct: 207 LAASNPTTQRSRPHTMFASGPPTLPPQQNGAVSAPVAPPRPFANGSV 253


>gb|EYU22327.1| hypothetical protein MIMGU_mgv1a0095012mg, partial [Erythranthe
           guttata]
          Length = 219

 Score = 79.3 bits (194), Expect = 9e-13
 Identities = 37/47 (78%), Positives = 41/47 (87%), Gaps = 1/47 (2%)
 Frame = +3

Query: 3   LAASNPTGQKNRPHTLFASGPPMLPPQPNGTVTAPV-PPRPFANGGV 140
           LAASNPT Q++RPHT+FASGPP LPPQ NG V+APV PPRPFANG V
Sbjct: 64  LAASNPTTQRSRPHTMFASGPPTLPPQQNGAVSAPVAPPRPFANGSV 110


>ref|XP_006383228.1| hypothetical protein POPTR_0005s12680g, partial [Populus
           trichocarpa] gi|550338810|gb|ERP61025.1| hypothetical
           protein POPTR_0005s12680g, partial [Populus trichocarpa]
          Length = 295

 Score = 79.0 bits (193), Expect = 1e-12
 Identities = 36/46 (78%), Positives = 37/46 (80%)
 Frame = +3

Query: 3   LAASNPTGQKNRPHTLFASGPPMLPPQPNGTVTAPVPPRPFANGGV 140
           LA SNPT QK+RPHTLFASGPP LP   NG V APVPPRPFANG V
Sbjct: 133 LAESNPTNQKSRPHTLFASGPPTLPTHANGAVMAPVPPRPFANGAV 178


>ref|XP_012074483.1| PREDICTED: splicing factor 3B subunit 4-like isoform X2 [Jatropha
           curcas]
          Length = 370

 Score = 78.2 bits (191), Expect = 2e-12
 Identities = 38/48 (79%), Positives = 40/48 (83%), Gaps = 2/48 (4%)
 Frame = +3

Query: 3   LAASNPTGQKNRPHTLFASGPPMLP--PQPNGTVTAPVPPRPFANGGV 140
           LAASNP+ QK+RPHTLFASGPP LP   Q NG V APVPPRPFANGGV
Sbjct: 204 LAASNPSAQKSRPHTLFASGPPKLPTVAQANGAVGAPVPPRPFANGGV 251


>ref|XP_012074482.1| PREDICTED: splicing factor 3B subunit 4-like isoform X1 [Jatropha
           curcas] gi|643727615|gb|KDP35985.1| hypothetical protein
           JCGZ_08380 [Jatropha curcas]
          Length = 373

 Score = 78.2 bits (191), Expect = 2e-12
 Identities = 38/48 (79%), Positives = 40/48 (83%), Gaps = 2/48 (4%)
 Frame = +3

Query: 3   LAASNPTGQKNRPHTLFASGPPMLP--PQPNGTVTAPVPPRPFANGGV 140
           LAASNP+ QK+RPHTLFASGPP LP   Q NG V APVPPRPFANGGV
Sbjct: 207 LAASNPSAQKSRPHTLFASGPPKLPTVAQANGAVGAPVPPRPFANGGV 254


>ref|XP_012065463.1| PREDICTED: splicing factor 3B subunit 4-like [Jatropha curcas]
           gi|643737592|gb|KDP43671.1| hypothetical protein
           JCGZ_24129 [Jatropha curcas]
          Length = 431

 Score = 77.8 bits (190), Expect = 3e-12
 Identities = 37/48 (77%), Positives = 40/48 (83%), Gaps = 2/48 (4%)
 Frame = +3

Query: 3   LAASNPTGQKNRPHTLFASGPPMLPP--QPNGTVTAPVPPRPFANGGV 140
           LAASNP+ QK+RPHTLFASGPP LP   Q NG V APVPPRPFANGG+
Sbjct: 265 LAASNPSAQKSRPHTLFASGPPTLPSIGQANGAVGAPVPPRPFANGGI 312


>ref|XP_011025747.1| PREDICTED: splicing factor 3B subunit 4-like [Populus euphratica]
          Length = 377

 Score = 77.0 bits (188), Expect = 5e-12
 Identities = 36/46 (78%), Positives = 38/46 (82%)
 Frame = +3

Query: 3   LAASNPTGQKNRPHTLFASGPPMLPPQPNGTVTAPVPPRPFANGGV 140
           LAASNPT QK+RPHTLFASGPP L  Q NG + APVPPRPFANG V
Sbjct: 207 LAASNPTTQKSRPHTLFASGPPTLASQANGAMVAPVPPRPFANGVV 252


>ref|XP_002310211.2| hypothetical protein POPTR_0007s12570g [Populus trichocarpa]
           gi|550334734|gb|EEE90661.2| hypothetical protein
           POPTR_0007s12570g [Populus trichocarpa]
          Length = 377

 Score = 77.0 bits (188), Expect = 5e-12
 Identities = 36/46 (78%), Positives = 38/46 (82%)
 Frame = +3

Query: 3   LAASNPTGQKNRPHTLFASGPPMLPPQPNGTVTAPVPPRPFANGGV 140
           LAASNPT QK+RPHTLFASGPP L  Q NG + APVPPRPFANG V
Sbjct: 207 LAASNPTTQKSRPHTLFASGPPTLASQANGAMVAPVPPRPFANGVV 252


>ref|XP_004503120.1| PREDICTED: splicing factor 3B subunit 4 [Cicer arietinum]
          Length = 379

 Score = 76.3 bits (186), Expect = 8e-12
 Identities = 37/46 (80%), Positives = 38/46 (82%), Gaps = 2/46 (4%)
 Frame = +3

Query: 3   LAASNPTGQKNRPHTLFASGPPMLP--PQPNGTVTAPVPPRPFANG 134
           LA SNPT QK+RPHTLFASGPP LP   Q NGTV APVPPRPFANG
Sbjct: 207 LAESNPTAQKSRPHTLFASGPPTLPNVAQANGTVPAPVPPRPFANG 252


>ref|XP_010942815.1| PREDICTED: splicing factor 3B subunit 4-like [Elaeis guineensis]
          Length = 387

 Score = 75.5 bits (184), Expect = 1e-11
 Identities = 35/48 (72%), Positives = 38/48 (79%), Gaps = 2/48 (4%)
 Frame = +3

Query: 3   LAASNPTGQKNRPHTLFASGPPMLP--PQPNGTVTAPVPPRPFANGGV 140
           LAASNP  Q+NRPHTLFASGPP LP  PQ NG   AP+PPRP+ANG V
Sbjct: 207 LAASNPGAQRNRPHTLFASGPPTLPNGPQANGAAGAPIPPRPYANGAV 254


>ref|XP_006341534.1| PREDICTED: splicing factor 3B subunit 4-like [Solanum tuberosum]
          Length = 364

 Score = 75.5 bits (184), Expect = 1e-11
 Identities = 36/46 (78%), Positives = 38/46 (82%), Gaps = 2/46 (4%)
 Frame = +3

Query: 3   LAASNPTGQKNRPHTLFASGPPMLP--PQPNGTVTAPVPPRPFANG 134
           LA+SNP  QKNRPHT+FASGPP LP  PQ NG V APVPPRPFANG
Sbjct: 207 LASSNPGTQKNRPHTMFASGPPTLPGVPQANGAVGAPVPPRPFANG 252


>ref|XP_004235773.1| PREDICTED: splicing factor 3B subunit 4 [Solanum lycopersicum]
          Length = 364

 Score = 75.5 bits (184), Expect = 1e-11
 Identities = 36/46 (78%), Positives = 38/46 (82%), Gaps = 2/46 (4%)
 Frame = +3

Query: 3   LAASNPTGQKNRPHTLFASGPPMLP--PQPNGTVTAPVPPRPFANG 134
           LA+SNP  QKNRPHT+FASGPP LP  PQ NG V APVPPRPFANG
Sbjct: 207 LASSNPGTQKNRPHTMFASGPPTLPGVPQANGAVGAPVPPRPFANG 252


>ref|XP_012456492.1| PREDICTED: splicing factor 3B subunit 4 [Gossypium raimondii]
           gi|763804005|gb|KJB70943.1| hypothetical protein
           B456_011G102300 [Gossypium raimondii]
          Length = 366

 Score = 75.1 bits (183), Expect = 2e-11
 Identities = 36/48 (75%), Positives = 39/48 (81%), Gaps = 2/48 (4%)
 Frame = +3

Query: 3   LAASNPTGQKNRPHTLFASGPPMLP--PQPNGTVTAPVPPRPFANGGV 140
           LAASNP+ QK+RPHTLFASGPP LP  PQ NG + APVPPRPF NG V
Sbjct: 207 LAASNPSSQKSRPHTLFASGPPTLPSGPQANGGIGAPVPPRPFPNGTV 254


>gb|KHG01547.1| Polyadenylate-binding, cytoplasmic and nuclear [Gossypium arboreum]
          Length = 366

 Score = 75.1 bits (183), Expect = 2e-11
 Identities = 36/48 (75%), Positives = 39/48 (81%), Gaps = 2/48 (4%)
 Frame = +3

Query: 3   LAASNPTGQKNRPHTLFASGPPMLP--PQPNGTVTAPVPPRPFANGGV 140
           LAASNP+ QK+RPHTLFASGPP LP  PQ NG + APVPPRPF NG V
Sbjct: 207 LAASNPSSQKSRPHTLFASGPPTLPSGPQANGGIGAPVPPRPFPNGTV 254


>ref|XP_006341070.1| PREDICTED: splicing factor 3B subunit 4-like [Solanum tuberosum]
          Length = 363

 Score = 75.1 bits (183), Expect = 2e-11
 Identities = 35/46 (76%), Positives = 38/46 (82%), Gaps = 2/46 (4%)
 Frame = +3

Query: 3   LAASNPTGQKNRPHTLFASGPPMLP--PQPNGTVTAPVPPRPFANG 134
           LA+SNP  QKNRPHT+FASGPP LP  PQ NG V AP+PPRPFANG
Sbjct: 207 LASSNPGTQKNRPHTMFASGPPTLPGVPQANGAVGAPIPPRPFANG 252


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