BLASTX nr result
ID: Forsythia21_contig00020898
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Forsythia21_contig00020898
(312 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|YP_009048013.1| DNA-directed RNA polymerase beta chain (chlo... 50 6e-08
ref|YP_053147.1| RNA polymerase beta subunit [Nymphaea alba] gi|... 50 6e-08
ref|YP_009127270.1| RNA polymerase beta subunit (chloroplast) [C... 49 6e-08
ref|YP_009108751.1| RNA polymerase beta subunit [Oncinotis tenui... 49 6e-08
gb|AGW04279.1| RNA polymerase beta subunit [Secamone afzelii] 49 6e-08
gb|AEX94324.1| RNA polymerase beta subunit (chloroplast) [Anemar... 49 6e-08
gb|AGW04967.1| RNA polymerase beta subunit [Vincetoxicum rossicum] 49 6e-08
gb|AGW04890.1| RNA polymerase beta subunit [Telosma cordata] 49 6e-08
gb|AGW04813.1| RNA polymerase beta subunit [Sisyranthus trichost... 49 6e-08
gb|AGW04736.1| RNA polymerase beta subunit [Orthosia scoparia] 49 6e-08
gb|AGW04659.1| RNA polymerase beta subunit [Matelea biflora] 49 6e-08
gb|AGW04582.1| RNA polymerase beta subunit [Marsdenia astephanoi... 49 6e-08
gb|AGW04510.1| RNA polymerase beta subunit [Eustegia minuta] 49 6e-08
ref|YP_778482.1| RNA polymerase beta subunit [Jasminum nudifloru... 50 6e-08
gb|AIW05343.1| RNA polymerase beta subunit [Epigynum auritum] 49 6e-08
gb|ACN42564.1| RNA polymerase beta subunit, partial (chloroplast... 49 6e-08
gb|ACN42464.1| RNA polymerase beta subunit, partial (chloroplast... 49 6e-08
gb|ACN42462.1| RNA polymerase beta subunit, partial (chloroplast... 49 6e-08
gb|ACH78466.1| RNA polymerase subunit, partial (chloroplast) [Fr... 50 6e-08
gb|ACH78460.1| RNA polymerase subunit, partial (chloroplast) [Rh... 50 6e-08
>ref|YP_009048013.1| DNA-directed RNA polymerase beta chain (chloroplast) [Nymphaea
mexicana] gi|573015061|gb|AHF71644.1| DNA-directed RNA
polymerase beta chain (chloroplast) [Nymphaea mexicana]
Length = 1071
Score = 50.1 bits (118), Expect(2) = 6e-08
Identities = 26/39 (66%), Positives = 29/39 (74%)
Frame = -3
Query: 169 GENVSVAYMPQKRYYS*DAVLIDEPSVYEDIYAYFLIRK 53
G+NVSVAYMP + Y S DAVLI E VY+DIY F IRK
Sbjct: 653 GKNVSVAYMPWEGYNSEDAVLISERLVYDDIYTSFHIRK 691
Score = 33.1 bits (74), Expect(2) = 6e-08
Identities = 15/16 (93%), Positives = 16/16 (100%)
Frame = -1
Query: 210 LADGAATVGGELSLGK 163
LADGAATVGGEL+LGK
Sbjct: 639 LADGAATVGGELALGK 654
>ref|YP_053147.1| RNA polymerase beta subunit [Nymphaea alba]
gi|68053165|sp|Q6EW56.1|RPOB_NYMAL RecName:
Full=DNA-directed RNA polymerase subunit beta; AltName:
Full=PEP; AltName: Full=Plastid-encoded RNA polymerase
subunit beta; Short=RNA polymerase subunit beta
(chloroplast) [Nymphaea alba]
gi|50250319|emb|CAF28585.1| RNA polymerase beta subunit
[Nymphaea alba]
Length = 1071
Score = 50.1 bits (118), Expect(2) = 6e-08
Identities = 26/39 (66%), Positives = 29/39 (74%)
Frame = -3
Query: 169 GENVSVAYMPQKRYYS*DAVLIDEPSVYEDIYAYFLIRK 53
G+NVSVAYMP + Y S DAVLI E VY+DIY F IRK
Sbjct: 653 GKNVSVAYMPWEGYNSEDAVLISERLVYDDIYTSFHIRK 691
Score = 33.1 bits (74), Expect(2) = 6e-08
Identities = 15/16 (93%), Positives = 16/16 (100%)
Frame = -1
Query: 210 LADGAATVGGELSLGK 163
LADGAATVGGEL+LGK
Sbjct: 639 LADGAATVGGELALGK 654
>ref|YP_009127270.1| RNA polymerase beta subunit (chloroplast) [Ceratonia siliqua]
Length = 1070
Score = 48.9 bits (115), Expect(2) = 6e-08
Identities = 26/39 (66%), Positives = 28/39 (71%)
Frame = -3
Query: 169 GENVSVAYMPQKRYYS*DAVLIDEPSVYEDIYAYFLIRK 53
G+NV VAYMP + Y S DAVLI E VYEDIY F IRK
Sbjct: 652 GKNVLVAYMPWEGYNSEDAVLISERLVYEDIYTSFHIRK 690
Score = 34.3 bits (77), Expect(2) = 6e-08
Identities = 16/16 (100%), Positives = 16/16 (100%)
Frame = -1
Query: 210 LADGAATVGGELSLGK 163
LADGAATVGGELSLGK
Sbjct: 638 LADGAATVGGELSLGK 653
>ref|YP_009108751.1| RNA polymerase beta subunit [Oncinotis tenuiloba]
gi|702075716|gb|AIW05597.1| RNA polymerase beta subunit
[Oncinotis tenuiloba]
Length = 1070
Score = 48.9 bits (115), Expect(2) = 6e-08
Identities = 26/39 (66%), Positives = 28/39 (71%)
Frame = -3
Query: 169 GENVSVAYMPQKRYYS*DAVLIDEPSVYEDIYAYFLIRK 53
G+NV VAYMP + Y S DAVLI E VYEDIY F IRK
Sbjct: 652 GKNVLVAYMPWEGYNSEDAVLISERLVYEDIYTSFHIRK 690
Score = 34.3 bits (77), Expect(2) = 6e-08
Identities = 16/16 (100%), Positives = 16/16 (100%)
Frame = -1
Query: 210 LADGAATVGGELSLGK 163
LADGAATVGGELSLGK
Sbjct: 638 LADGAATVGGELSLGK 653
>gb|AGW04279.1| RNA polymerase beta subunit [Secamone afzelii]
Length = 1070
Score = 48.9 bits (115), Expect(2) = 6e-08
Identities = 26/39 (66%), Positives = 28/39 (71%)
Frame = -3
Query: 169 GENVSVAYMPQKRYYS*DAVLIDEPSVYEDIYAYFLIRK 53
G+NV VAYMP + Y S DAVLI E VYEDIY F IRK
Sbjct: 652 GKNVLVAYMPWEGYNSEDAVLISERLVYEDIYTSFHIRK 690
Score = 34.3 bits (77), Expect(2) = 6e-08
Identities = 16/16 (100%), Positives = 16/16 (100%)
Frame = -1
Query: 210 LADGAATVGGELSLGK 163
LADGAATVGGELSLGK
Sbjct: 638 LADGAATVGGELSLGK 653
>gb|AEX94324.1| RNA polymerase beta subunit (chloroplast) [Anemarrhena
asphodeloides]
Length = 1070
Score = 48.9 bits (115), Expect(2) = 6e-08
Identities = 26/39 (66%), Positives = 28/39 (71%)
Frame = -3
Query: 169 GENVSVAYMPQKRYYS*DAVLIDEPSVYEDIYAYFLIRK 53
G+NV VAYMP + Y S DAVLI E VYEDIY F IRK
Sbjct: 652 GKNVLVAYMPWEGYNSEDAVLISERLVYEDIYTSFHIRK 690
Score = 34.3 bits (77), Expect(2) = 6e-08
Identities = 16/16 (100%), Positives = 16/16 (100%)
Frame = -1
Query: 210 LADGAATVGGELSLGK 163
LADGAATVGGELSLGK
Sbjct: 638 LADGAATVGGELSLGK 653
>gb|AGW04967.1| RNA polymerase beta subunit [Vincetoxicum rossicum]
Length = 1069
Score = 48.9 bits (115), Expect(2) = 6e-08
Identities = 26/39 (66%), Positives = 28/39 (71%)
Frame = -3
Query: 169 GENVSVAYMPQKRYYS*DAVLIDEPSVYEDIYAYFLIRK 53
G+NV VAYMP + Y S DAVLI E VYEDIY F IRK
Sbjct: 652 GKNVLVAYMPWEGYNSEDAVLISERLVYEDIYTSFHIRK 690
Score = 34.3 bits (77), Expect(2) = 6e-08
Identities = 16/16 (100%), Positives = 16/16 (100%)
Frame = -1
Query: 210 LADGAATVGGELSLGK 163
LADGAATVGGELSLGK
Sbjct: 638 LADGAATVGGELSLGK 653
>gb|AGW04890.1| RNA polymerase beta subunit [Telosma cordata]
Length = 1069
Score = 48.9 bits (115), Expect(2) = 6e-08
Identities = 26/39 (66%), Positives = 28/39 (71%)
Frame = -3
Query: 169 GENVSVAYMPQKRYYS*DAVLIDEPSVYEDIYAYFLIRK 53
G+NV VAYMP + Y S DAVLI E VYEDIY F IRK
Sbjct: 652 GKNVLVAYMPWEGYNSEDAVLISERLVYEDIYTSFHIRK 690
Score = 34.3 bits (77), Expect(2) = 6e-08
Identities = 16/16 (100%), Positives = 16/16 (100%)
Frame = -1
Query: 210 LADGAATVGGELSLGK 163
LADGAATVGGELSLGK
Sbjct: 638 LADGAATVGGELSLGK 653
>gb|AGW04813.1| RNA polymerase beta subunit [Sisyranthus trichostomus]
Length = 1069
Score = 48.9 bits (115), Expect(2) = 6e-08
Identities = 26/39 (66%), Positives = 28/39 (71%)
Frame = -3
Query: 169 GENVSVAYMPQKRYYS*DAVLIDEPSVYEDIYAYFLIRK 53
G+NV VAYMP + Y S DAVLI E VYEDIY F IRK
Sbjct: 652 GKNVLVAYMPWEGYNSEDAVLISERLVYEDIYTSFHIRK 690
Score = 34.3 bits (77), Expect(2) = 6e-08
Identities = 16/16 (100%), Positives = 16/16 (100%)
Frame = -1
Query: 210 LADGAATVGGELSLGK 163
LADGAATVGGELSLGK
Sbjct: 638 LADGAATVGGELSLGK 653
>gb|AGW04736.1| RNA polymerase beta subunit [Orthosia scoparia]
Length = 1069
Score = 48.9 bits (115), Expect(2) = 6e-08
Identities = 26/39 (66%), Positives = 28/39 (71%)
Frame = -3
Query: 169 GENVSVAYMPQKRYYS*DAVLIDEPSVYEDIYAYFLIRK 53
G+NV VAYMP + Y S DAVLI E VYEDIY F IRK
Sbjct: 652 GKNVLVAYMPWEGYNSEDAVLISERLVYEDIYTSFHIRK 690
Score = 34.3 bits (77), Expect(2) = 6e-08
Identities = 16/16 (100%), Positives = 16/16 (100%)
Frame = -1
Query: 210 LADGAATVGGELSLGK 163
LADGAATVGGELSLGK
Sbjct: 638 LADGAATVGGELSLGK 653
>gb|AGW04659.1| RNA polymerase beta subunit [Matelea biflora]
Length = 1069
Score = 48.9 bits (115), Expect(2) = 6e-08
Identities = 26/39 (66%), Positives = 28/39 (71%)
Frame = -3
Query: 169 GENVSVAYMPQKRYYS*DAVLIDEPSVYEDIYAYFLIRK 53
G+NV VAYMP + Y S DAVLI E VYEDIY F IRK
Sbjct: 652 GKNVLVAYMPWEGYNSEDAVLISERLVYEDIYTSFHIRK 690
Score = 34.3 bits (77), Expect(2) = 6e-08
Identities = 16/16 (100%), Positives = 16/16 (100%)
Frame = -1
Query: 210 LADGAATVGGELSLGK 163
LADGAATVGGELSLGK
Sbjct: 638 LADGAATVGGELSLGK 653
>gb|AGW04582.1| RNA polymerase beta subunit [Marsdenia astephanoides]
Length = 1069
Score = 48.9 bits (115), Expect(2) = 6e-08
Identities = 26/39 (66%), Positives = 28/39 (71%)
Frame = -3
Query: 169 GENVSVAYMPQKRYYS*DAVLIDEPSVYEDIYAYFLIRK 53
G+NV VAYMP + Y S DAVLI E VYEDIY F IRK
Sbjct: 652 GKNVLVAYMPWEGYNSEDAVLISERLVYEDIYTSFHIRK 690
Score = 34.3 bits (77), Expect(2) = 6e-08
Identities = 16/16 (100%), Positives = 16/16 (100%)
Frame = -1
Query: 210 LADGAATVGGELSLGK 163
LADGAATVGGELSLGK
Sbjct: 638 LADGAATVGGELSLGK 653
>gb|AGW04510.1| RNA polymerase beta subunit [Eustegia minuta]
Length = 1069
Score = 48.9 bits (115), Expect(2) = 6e-08
Identities = 26/39 (66%), Positives = 28/39 (71%)
Frame = -3
Query: 169 GENVSVAYMPQKRYYS*DAVLIDEPSVYEDIYAYFLIRK 53
G+NV VAYMP + Y S DAVLI E VYEDIY F IRK
Sbjct: 652 GKNVLVAYMPWEGYNSEDAVLISERLVYEDIYTSFHIRK 690
Score = 34.3 bits (77), Expect(2) = 6e-08
Identities = 16/16 (100%), Positives = 16/16 (100%)
Frame = -1
Query: 210 LADGAATVGGELSLGK 163
LADGAATVGGELSLGK
Sbjct: 638 LADGAATVGGELSLGK 653
>ref|YP_778482.1| RNA polymerase beta subunit [Jasminum nudiflorum]
gi|122164981|sp|Q06RD9.1|RPOB_JASNU RecName:
Full=DNA-directed RNA polymerase subunit beta; AltName:
Full=PEP; AltName: Full=Plastid-encoded RNA polymerase
subunit beta; Short=RNA polymerase subunit beta
(chloroplast) [Jasminum nudiflorum]
gi|110456215|gb|ABG74620.1| RNA polymerase beta subunit
[Jasminum nudiflorum]
Length = 1064
Score = 50.1 bits (118), Expect(2) = 6e-08
Identities = 29/52 (55%), Positives = 32/52 (61%)
Frame = -3
Query: 169 GENVSVAYMPQKRYYS*DAVLIDEPSVYEDIYAYFLIRKSSQQLIFLFRVYN 14
G+NV VAYMP + Y S DAVLI E VYEDIY F IRK Q R+ N
Sbjct: 654 GKNVLVAYMPWEGYNSEDAVLISERLVYEDIYTSFHIRKYEIQTAGTERITN 705
Score = 33.1 bits (74), Expect(2) = 6e-08
Identities = 15/16 (93%), Positives = 16/16 (100%)
Frame = -1
Query: 210 LADGAATVGGELSLGK 163
LADGAATVGGEL+LGK
Sbjct: 640 LADGAATVGGELALGK 655
>gb|AIW05343.1| RNA polymerase beta subunit [Epigynum auritum]
Length = 1062
Score = 48.9 bits (115), Expect(2) = 6e-08
Identities = 26/39 (66%), Positives = 28/39 (71%)
Frame = -3
Query: 169 GENVSVAYMPQKRYYS*DAVLIDEPSVYEDIYAYFLIRK 53
G+NV VAYMP + Y S DAVLI E VYEDIY F IRK
Sbjct: 644 GKNVLVAYMPWEGYNSEDAVLISERLVYEDIYTSFHIRK 682
Score = 34.3 bits (77), Expect(2) = 6e-08
Identities = 16/16 (100%), Positives = 16/16 (100%)
Frame = -1
Query: 210 LADGAATVGGELSLGK 163
LADGAATVGGELSLGK
Sbjct: 630 LADGAATVGGELSLGK 645
>gb|ACN42564.1| RNA polymerase beta subunit, partial (chloroplast) [Strychnos
erichsonii]
Length = 158
Score = 48.9 bits (115), Expect(2) = 6e-08
Identities = 26/39 (66%), Positives = 28/39 (71%)
Frame = -3
Query: 169 GENVSVAYMPQKRYYS*DAVLIDEPSVYEDIYAYFLIRK 53
G+NV VAYMP + Y S DAVLI E VYEDIY F IRK
Sbjct: 87 GKNVLVAYMPWEGYNSEDAVLISERLVYEDIYTSFHIRK 125
Score = 34.3 bits (77), Expect(2) = 6e-08
Identities = 16/16 (100%), Positives = 16/16 (100%)
Frame = -1
Query: 210 LADGAATVGGELSLGK 163
LADGAATVGGELSLGK
Sbjct: 73 LADGAATVGGELSLGK 88
>gb|ACN42464.1| RNA polymerase beta subunit, partial (chloroplast) [Aspidosperma
cruentum]
Length = 158
Score = 48.9 bits (115), Expect(2) = 6e-08
Identities = 26/39 (66%), Positives = 28/39 (71%)
Frame = -3
Query: 169 GENVSVAYMPQKRYYS*DAVLIDEPSVYEDIYAYFLIRK 53
G+NV VAYMP + Y S DAVLI E VYEDIY F IRK
Sbjct: 87 GKNVLVAYMPWEGYNSEDAVLISERLVYEDIYTSFHIRK 125
Score = 34.3 bits (77), Expect(2) = 6e-08
Identities = 16/16 (100%), Positives = 16/16 (100%)
Frame = -1
Query: 210 LADGAATVGGELSLGK 163
LADGAATVGGELSLGK
Sbjct: 73 LADGAATVGGELSLGK 88
>gb|ACN42462.1| RNA polymerase beta subunit, partial (chloroplast) [Ambelania
acida] gi|224382878|gb|ACN42463.1| RNA polymerase beta
subunit, partial (chloroplast) [Ambelania acida]
gi|224382886|gb|ACN42467.1| RNA polymerase beta subunit,
partial (chloroplast) [Tabernaemontana disticha]
Length = 158
Score = 48.9 bits (115), Expect(2) = 6e-08
Identities = 26/39 (66%), Positives = 28/39 (71%)
Frame = -3
Query: 169 GENVSVAYMPQKRYYS*DAVLIDEPSVYEDIYAYFLIRK 53
G+NV VAYMP + Y S DAVLI E VYEDIY F IRK
Sbjct: 87 GKNVLVAYMPWEGYNSEDAVLISERLVYEDIYTSFHIRK 125
Score = 34.3 bits (77), Expect(2) = 6e-08
Identities = 16/16 (100%), Positives = 16/16 (100%)
Frame = -1
Query: 210 LADGAATVGGELSLGK 163
LADGAATVGGELSLGK
Sbjct: 73 LADGAATVGGELSLGK 88
>gb|ACH78466.1| RNA polymerase subunit, partial (chloroplast) [Frangula alnus]
gi|197941724|gb|ACH78467.1| RNA polymerase subunit,
partial (chloroplast) [Frangula alnus]
Length = 157
Score = 50.1 bits (118), Expect(2) = 6e-08
Identities = 26/39 (66%), Positives = 29/39 (74%)
Frame = -3
Query: 169 GENVSVAYMPQKRYYS*DAVLIDEPSVYEDIYAYFLIRK 53
G+NV VAYMP + Y S DAVLI+E VYEDIY F IRK
Sbjct: 86 GKNVLVAYMPWEGYNSEDAVLINERLVYEDIYTSFYIRK 124
Score = 33.1 bits (74), Expect(2) = 6e-08
Identities = 15/16 (93%), Positives = 16/16 (100%)
Frame = -1
Query: 210 LADGAATVGGELSLGK 163
LADGAATVGGEL+LGK
Sbjct: 72 LADGAATVGGELTLGK 87
>gb|ACH78460.1| RNA polymerase subunit, partial (chloroplast) [Rhamnus alnifolia]
Length = 157
Score = 50.1 bits (118), Expect(2) = 6e-08
Identities = 26/39 (66%), Positives = 29/39 (74%)
Frame = -3
Query: 169 GENVSVAYMPQKRYYS*DAVLIDEPSVYEDIYAYFLIRK 53
G+NV VAYMP + Y S DAVLI+E VYEDIY F IRK
Sbjct: 86 GKNVLVAYMPWEGYNSEDAVLINERLVYEDIYTSFYIRK 124
Score = 33.1 bits (74), Expect(2) = 6e-08
Identities = 15/16 (93%), Positives = 16/16 (100%)
Frame = -1
Query: 210 LADGAATVGGELSLGK 163
LADGAATVGGEL+LGK
Sbjct: 72 LADGAATVGGELTLGK 87