BLASTX nr result

ID: Forsythia21_contig00020815 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Forsythia21_contig00020815
         (227 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011651474.1| PREDICTED: mediator of RNA polymerase II tra...   113   4e-23
ref|XP_011626778.1| PREDICTED: mediator of RNA polymerase II tra...   113   4e-23
ref|XP_012468481.1| PREDICTED: mediator of RNA polymerase II tra...   113   4e-23
ref|XP_012468480.1| PREDICTED: mediator of RNA polymerase II tra...   113   4e-23
ref|XP_004149176.2| PREDICTED: mediator of RNA polymerase II tra...   113   4e-23
ref|XP_008447573.1| PREDICTED: mediator of RNA polymerase II tra...   113   4e-23
ref|XP_008447572.1| PREDICTED: mediator of RNA polymerase II tra...   113   4e-23
gb|ERN15248.1| hypothetical protein AMTR_s00056p00208470 [Ambore...   113   4e-23
gb|EPS70398.1| hypothetical protein M569_04362, partial [Genlise...   112   8e-23
ref|XP_011072456.1| PREDICTED: mediator of RNA polymerase II tra...   112   1e-22
ref|XP_002282496.1| PREDICTED: mediator of RNA polymerase II tra...   111   2e-22
emb|CAN68925.1| hypothetical protein VITISV_044247 [Vitis vinifera]   111   2e-22
gb|KHG08969.1| Putative mediator of RNA polymerase II transcript...   111   2e-22
emb|CDP21043.1| unnamed protein product [Coffea canephora]            111   2e-22
ref|XP_007024366.1| RNA polymerase transcriptional regulation me...   111   2e-22
ref|XP_011046101.1| PREDICTED: mediator of RNA polymerase II tra...   110   3e-22
ref|XP_010033662.1| PREDICTED: mediator of RNA polymerase II tra...   110   3e-22
ref|XP_002515912.1| RNA polymerase II mediator complex subunit, ...   110   3e-22
ref|XP_006372643.1| RNA polymerase transcriptional regulation me...   110   3e-22
ref|XP_004252362.1| PREDICTED: mediator of RNA polymerase II tra...   110   3e-22

>ref|XP_011651474.1| PREDICTED: mediator of RNA polymerase II transcription subunit 6
           isoform X2 [Cucumis sativus]
          Length = 236

 Score =  113 bits (283), Expect = 4e-23
 Identities = 52/59 (88%), Positives = 55/59 (93%)
 Frame = +2

Query: 50  GTDMTRICFRDQLWLNTYPLDRHLVFDYFALSQFYDYTCNNEQLRLRSIHPLDHSQLLK 226
           GTDMT ICFRDQLWLNTYPLDR+LVFDYFALS FYD+TCNNEQLR+RSIHPLD SQL K
Sbjct: 29  GTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSK 87


>ref|XP_011626778.1| PREDICTED: mediator of RNA polymerase II transcription subunit 6
           [Amborella trichopoda]
          Length = 256

 Score =  113 bits (283), Expect = 4e-23
 Identities = 52/59 (88%), Positives = 55/59 (93%)
 Frame = +2

Query: 50  GTDMTRICFRDQLWLNTYPLDRHLVFDYFALSQFYDYTCNNEQLRLRSIHPLDHSQLLK 226
           GTDMT ICFRDQLWLNTYPLDR+LVFDYFALS FYD+TCNNEQLR+RSIHPLD SQL K
Sbjct: 29  GTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDISQLSK 87


>ref|XP_012468481.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           6-like isoform X2 [Gossypium raimondii]
           gi|763749599|gb|KJB17038.1| hypothetical protein
           B456_002G261900 [Gossypium raimondii]
          Length = 204

 Score =  113 bits (283), Expect = 4e-23
 Identities = 52/59 (88%), Positives = 55/59 (93%)
 Frame = +2

Query: 50  GTDMTRICFRDQLWLNTYPLDRHLVFDYFALSQFYDYTCNNEQLRLRSIHPLDHSQLLK 226
           GTDMT ICFRDQLWLNTYPLDR+LVFDYFALS FYD+TCNNEQLR+RSIHPLD SQL K
Sbjct: 24  GTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSK 82


>ref|XP_012468480.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           6-like isoform X1 [Gossypium raimondii]
           gi|763749598|gb|KJB17037.1| hypothetical protein
           B456_002G261900 [Gossypium raimondii]
          Length = 252

 Score =  113 bits (283), Expect = 4e-23
 Identities = 52/59 (88%), Positives = 55/59 (93%)
 Frame = +2

Query: 50  GTDMTRICFRDQLWLNTYPLDRHLVFDYFALSQFYDYTCNNEQLRLRSIHPLDHSQLLK 226
           GTDMT ICFRDQLWLNTYPLDR+LVFDYFALS FYD+TCNNEQLR+RSIHPLD SQL K
Sbjct: 24  GTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSK 82


>ref|XP_004149176.2| PREDICTED: mediator of RNA polymerase II transcription subunit 6
           isoform X1 [Cucumis sativus] gi|700202880|gb|KGN58013.1|
           hypothetical protein Csa_3G434940 [Cucumis sativus]
          Length = 257

 Score =  113 bits (283), Expect = 4e-23
 Identities = 52/59 (88%), Positives = 55/59 (93%)
 Frame = +2

Query: 50  GTDMTRICFRDQLWLNTYPLDRHLVFDYFALSQFYDYTCNNEQLRLRSIHPLDHSQLLK 226
           GTDMT ICFRDQLWLNTYPLDR+LVFDYFALS FYD+TCNNEQLR+RSIHPLD SQL K
Sbjct: 29  GTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSK 87


>ref|XP_008447573.1| PREDICTED: mediator of RNA polymerase II transcription subunit 6
           isoform X2 [Cucumis melo]
          Length = 234

 Score =  113 bits (283), Expect = 4e-23
 Identities = 52/59 (88%), Positives = 55/59 (93%)
 Frame = +2

Query: 50  GTDMTRICFRDQLWLNTYPLDRHLVFDYFALSQFYDYTCNNEQLRLRSIHPLDHSQLLK 226
           GTDMT ICFRDQLWLNTYPLDR+LVFDYFALS FYD+TCNNEQLR+RSIHPLD SQL K
Sbjct: 30  GTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSK 88


>ref|XP_008447572.1| PREDICTED: mediator of RNA polymerase II transcription subunit 6
           isoform X1 [Cucumis melo]
          Length = 255

 Score =  113 bits (283), Expect = 4e-23
 Identities = 52/59 (88%), Positives = 55/59 (93%)
 Frame = +2

Query: 50  GTDMTRICFRDQLWLNTYPLDRHLVFDYFALSQFYDYTCNNEQLRLRSIHPLDHSQLLK 226
           GTDMT ICFRDQLWLNTYPLDR+LVFDYFALS FYD+TCNNEQLR+RSIHPLD SQL K
Sbjct: 30  GTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSK 88


>gb|ERN15248.1| hypothetical protein AMTR_s00056p00208470 [Amborella trichopoda]
          Length = 174

 Score =  113 bits (283), Expect = 4e-23
 Identities = 52/59 (88%), Positives = 55/59 (93%)
 Frame = +2

Query: 50  GTDMTRICFRDQLWLNTYPLDRHLVFDYFALSQFYDYTCNNEQLRLRSIHPLDHSQLLK 226
           GTDMT ICFRDQLWLNTYPLDR+LVFDYFALS FYD+TCNNEQLR+RSIHPLD SQL K
Sbjct: 29  GTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDISQLSK 87


>gb|EPS70398.1| hypothetical protein M569_04362, partial [Genlisea aurea]
          Length = 238

 Score =  112 bits (281), Expect = 8e-23
 Identities = 52/59 (88%), Positives = 53/59 (89%)
 Frame = +2

Query: 50  GTDMTRICFRDQLWLNTYPLDRHLVFDYFALSQFYDYTCNNEQLRLRSIHPLDHSQLLK 226
           GTDMT ICFRDQLWLNTYPLDR+ VFDYFALS FYDY CNNEQLRLRSIHPLD SQL K
Sbjct: 8   GTDMTGICFRDQLWLNTYPLDRNTVFDYFALSPFYDYACNNEQLRLRSIHPLDASQLSK 66


>ref|XP_011072456.1| PREDICTED: mediator of RNA polymerase II transcription subunit 6
           [Sesamum indicum]
          Length = 254

 Score =  112 bits (279), Expect = 1e-22
 Identities = 51/59 (86%), Positives = 54/59 (91%)
 Frame = +2

Query: 50  GTDMTRICFRDQLWLNTYPLDRHLVFDYFALSQFYDYTCNNEQLRLRSIHPLDHSQLLK 226
           GTDMT ICFRDQLWLNTYPLDR+LVFDYFALS FYDY+CNNEQLRLR+IHPLD S L K
Sbjct: 29  GTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDYSCNNEQLRLRAIHPLDTSHLSK 87


>ref|XP_002282496.1| PREDICTED: mediator of RNA polymerase II transcription subunit 6
           [Vitis vinifera]
          Length = 258

 Score =  111 bits (278), Expect = 2e-22
 Identities = 55/75 (73%), Positives = 58/75 (77%)
 Frame = +2

Query: 2   NFDGVXXXXXXXXXXXGTDMTRICFRDQLWLNTYPLDRHLVFDYFALSQFYDYTCNNEQL 181
           NFDG            GTDMT ICFRDQLWLN+YPLDR+LVFDYFALS FYD+TCNNEQL
Sbjct: 17  NFDG---NPPAVPTPPGTDMTGICFRDQLWLNSYPLDRNLVFDYFALSPFYDWTCNNEQL 73

Query: 182 RLRSIHPLDHSQLLK 226
           RLRSIHPLD S L K
Sbjct: 74  RLRSIHPLDTSHLSK 88


>emb|CAN68925.1| hypothetical protein VITISV_044247 [Vitis vinifera]
          Length = 253

 Score =  111 bits (278), Expect = 2e-22
 Identities = 55/75 (73%), Positives = 58/75 (77%)
 Frame = +2

Query: 2   NFDGVXXXXXXXXXXXGTDMTRICFRDQLWLNTYPLDRHLVFDYFALSQFYDYTCNNEQL 181
           NFDG            GTDMT ICFRDQLWLN+YPLDR+LVFDYFALS FYD+TCNNEQL
Sbjct: 12  NFDG---NPPAAPTPPGTDMTGICFRDQLWLNSYPLDRNLVFDYFALSPFYDWTCNNEQL 68

Query: 182 RLRSIHPLDHSQLLK 226
           RLRSIHPLD S L K
Sbjct: 69  RLRSIHPLDTSHLSK 83


>gb|KHG08969.1| Putative mediator of RNA polymerase II transcription subunit 6
           [Gossypium arboreum]
          Length = 252

 Score =  111 bits (277), Expect = 2e-22
 Identities = 51/59 (86%), Positives = 54/59 (91%)
 Frame = +2

Query: 50  GTDMTRICFRDQLWLNTYPLDRHLVFDYFALSQFYDYTCNNEQLRLRSIHPLDHSQLLK 226
           GTDMT ICFRDQLWLNTYPLDR+LVFDYFALS  YD+TCNNEQLR+RSIHPLD SQL K
Sbjct: 24  GTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPLYDWTCNNEQLRMRSIHPLDLSQLSK 82


>emb|CDP21043.1| unnamed protein product [Coffea canephora]
          Length = 253

 Score =  111 bits (277), Expect = 2e-22
 Identities = 51/59 (86%), Positives = 54/59 (91%)
 Frame = +2

Query: 50  GTDMTRICFRDQLWLNTYPLDRHLVFDYFALSQFYDYTCNNEQLRLRSIHPLDHSQLLK 226
           GTDMT ICFRDQLWLNTYPLDR+LVFDYFALS FY++TCNNEQLRLRSIHPLD S L K
Sbjct: 26  GTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYEWTCNNEQLRLRSIHPLDASHLSK 84


>ref|XP_007024366.1| RNA polymerase transcriptional regulation mediator-related isoform
           1 [Theobroma cacao] gi|508779732|gb|EOY26988.1| RNA
           polymerase transcriptional regulation mediator-related
           isoform 1 [Theobroma cacao]
          Length = 257

 Score =  111 bits (277), Expect = 2e-22
 Identities = 50/59 (84%), Positives = 54/59 (91%)
 Frame = +2

Query: 50  GTDMTRICFRDQLWLNTYPLDRHLVFDYFALSQFYDYTCNNEQLRLRSIHPLDHSQLLK 226
           GTDMT ICFRDQLWLNTYPLDR+L+FDYFALS FYD+TCNNEQLR+ SIHPLD SQL K
Sbjct: 29  GTDMTGICFRDQLWLNTYPLDRNLIFDYFALSPFYDWTCNNEQLRMHSIHPLDISQLSK 87


>ref|XP_011046101.1| PREDICTED: mediator of RNA polymerase II transcription subunit 6
           [Populus euphratica] gi|743905404|ref|XP_011046103.1|
           PREDICTED: mediator of RNA polymerase II transcription
           subunit 6 [Populus euphratica]
          Length = 259

 Score =  110 bits (276), Expect = 3e-22
 Identities = 51/59 (86%), Positives = 54/59 (91%)
 Frame = +2

Query: 50  GTDMTRICFRDQLWLNTYPLDRHLVFDYFALSQFYDYTCNNEQLRLRSIHPLDHSQLLK 226
           GTDMT ICFRDQLWLNTYPLDR+LVFDYFALS FYD+TCNNEQLR +SIHPLD S LLK
Sbjct: 31  GTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRSQSIHPLDLSHLLK 89


>ref|XP_010033662.1| PREDICTED: mediator of RNA polymerase II transcription subunit 6
           [Eucalyptus grandis] gi|629087004|gb|KCW53361.1|
           hypothetical protein EUGRSUZ_J02602 [Eucalyptus grandis]
          Length = 254

 Score =  110 bits (276), Expect = 3e-22
 Identities = 51/58 (87%), Positives = 53/58 (91%)
 Frame = +2

Query: 53  TDMTRICFRDQLWLNTYPLDRHLVFDYFALSQFYDYTCNNEQLRLRSIHPLDHSQLLK 226
           TDMT ICFRDQLWLNTYPLDR+LVFDYFALS FYD+TCNNEQLRLRSIHPLD  QL K
Sbjct: 29  TDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDFTCNNEQLRLRSIHPLDMPQLSK 86


>ref|XP_002515912.1| RNA polymerase II mediator complex subunit, putative [Ricinus
           communis] gi|223544817|gb|EEF46332.1| RNA polymerase II
           mediator complex subunit, putative [Ricinus communis]
          Length = 251

 Score =  110 bits (276), Expect = 3e-22
 Identities = 54/75 (72%), Positives = 58/75 (77%)
 Frame = +2

Query: 2   NFDGVXXXXXXXXXXXGTDMTRICFRDQLWLNTYPLDRHLVFDYFALSQFYDYTCNNEQL 181
           NFDG            GTDMT ICFRDQLWLNTYPLDR+L+FDYFALS FYD+TCNNEQL
Sbjct: 9   NFDG-NPLAPAPPQPPGTDMTGICFRDQLWLNTYPLDRNLIFDYFALSPFYDWTCNNEQL 67

Query: 182 RLRSIHPLDHSQLLK 226
           RL+SIHPLD S L K
Sbjct: 68  RLQSIHPLDLSHLSK 82


>ref|XP_006372643.1| RNA polymerase transcriptional regulation mediator-related family
           protein [Populus trichocarpa]
           gi|550319272|gb|ERP50440.1| RNA polymerase
           transcriptional regulation mediator-related family
           protein [Populus trichocarpa]
          Length = 259

 Score =  110 bits (276), Expect = 3e-22
 Identities = 51/59 (86%), Positives = 54/59 (91%)
 Frame = +2

Query: 50  GTDMTRICFRDQLWLNTYPLDRHLVFDYFALSQFYDYTCNNEQLRLRSIHPLDHSQLLK 226
           GTDMT ICFRDQLWLNTYPLDR+LVFDYFALS FYD+TCNNEQLR +SIHPLD S LLK
Sbjct: 31  GTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRSQSIHPLDLSHLLK 89


>ref|XP_004252362.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           6-like [Solanum lycopersicum]
          Length = 251

 Score =  110 bits (276), Expect = 3e-22
 Identities = 55/75 (73%), Positives = 57/75 (76%)
 Frame = +2

Query: 2   NFDGVXXXXXXXXXXXGTDMTRICFRDQLWLNTYPLDRHLVFDYFALSQFYDYTCNNEQL 181
           NFDG            GTDMT ICFRDQLWLNTYPLDR+LVFDYFALS FYD+TCNNEQL
Sbjct: 14  NFDG---GAPALPPQPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQL 70

Query: 182 RLRSIHPLDHSQLLK 226
           R RSIHPLD S L K
Sbjct: 71  RSRSIHPLDTSHLSK 85


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