BLASTX nr result

ID: Forsythia21_contig00020237 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Forsythia21_contig00020237
         (203 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CDP18627.1| unnamed protein product [Coffea canephora]            103   6e-20
ref|XP_009798737.1| PREDICTED: probable E3 ubiquitin-protein lig...   100   5e-19
emb|CDP06319.1| unnamed protein product [Coffea canephora]            100   6e-19
ref|XP_010112096.1| E3 ubiquitin ligase BIG BROTHER [Morus notab...    99   1e-18
ref|XP_009769247.1| PREDICTED: uncharacterized protein LOC104220...    98   2e-18
emb|CBI20761.3| unnamed protein product [Vitis vinifera]               97   3e-18
ref|XP_002280551.1| PREDICTED: E3 ubiquitin-protein ligase RLIM ...    97   3e-18
ref|XP_009600408.1| PREDICTED: E3 ubiquitin-protein ligase MBR1 ...    97   4e-18
gb|KGN60171.1| hypothetical protein Csa_3G881840 [Cucumis sativus]     97   5e-18
ref|XP_004136311.1| PREDICTED: uncharacterized protein LOC101218...    97   5e-18
ref|XP_009618305.1| PREDICTED: E3 ubiquitin-protein ligase MBR2 ...    96   9e-18
ref|XP_007011597.1| RING/U-box superfamily protein, putative iso...    96   1e-17
ref|XP_012449263.1| PREDICTED: uncharacterized protein LOC105772...    95   2e-17
ref|XP_010928687.1| PREDICTED: E3 ubiquitin-protein ligase RNF12...    95   2e-17
gb|KHG19601.1| RING finger protein [Gossypium arboreum]                95   2e-17
ref|XP_008466306.1| PREDICTED: probable GPI-anchored adhesin-lik...    95   2e-17
ref|XP_010456473.1| PREDICTED: uncharacterized RING finger prote...    95   2e-17
ref|XP_010422822.1| PREDICTED: E3 ubiquitin-protein ligase RLIM-...    95   2e-17
emb|CDX78393.1| BnaA03g03050D [Brassica napus]                         95   2e-17
dbj|BAH19781.1| AT5G10650 [Arabidopsis thaliana]                       95   2e-17

>emb|CDP18627.1| unnamed protein product [Coffea canephora]
          Length = 551

 Score =  103 bits (256), Expect = 6e-20
 Identities = 43/62 (69%), Positives = 51/62 (82%)
 Frame = -2

Query: 196 TGSFGNDNDIKCCICQEEFVYGDEIGKLGCQHGYHVACIEQWLRLKNWCPICKVFASRPK 17
           +G   ++ DIKC ICQEE+  GDEIGKLGC+HGYHVACI+QWLRLKNWCPICK  A+  +
Sbjct: 487 SGCSEDEADIKCSICQEEYAVGDEIGKLGCEHGYHVACIQQWLRLKNWCPICKASAATSQ 546

Query: 16  SS 11
           SS
Sbjct: 547 SS 548


>ref|XP_009798737.1| PREDICTED: probable E3 ubiquitin-protein ligase HIP1 [Nicotiana
           sylvestris]
          Length = 535

 Score =  100 bits (248), Expect = 5e-19
 Identities = 41/58 (70%), Positives = 48/58 (82%)
 Frame = -2

Query: 184 GNDNDIKCCICQEEFVYGDEIGKLGCQHGYHVACIEQWLRLKNWCPICKVFASRPKSS 11
           G+ +DIKC ICQEE+V GDEIGKLGC+HGYH+ CI QW RLKNWCPICK  A+  +SS
Sbjct: 474 GDGDDIKCSICQEEYVIGDEIGKLGCEHGYHLECITQWFRLKNWCPICKATAAPSESS 531


>emb|CDP06319.1| unnamed protein product [Coffea canephora]
          Length = 344

 Score = 99.8 bits (247), Expect = 6e-19
 Identities = 42/61 (68%), Positives = 49/61 (80%)
 Frame = -2

Query: 193 GSFGNDNDIKCCICQEEFVYGDEIGKLGCQHGYHVACIEQWLRLKNWCPICKVFASRPKS 14
           G   ++ DI+C ICQEE+V GDEIGKLGC+HGYHV CI QWLRLKNWCPICK  A+  +S
Sbjct: 281 GCSDDEADIRCGICQEEYVAGDEIGKLGCEHGYHVVCIHQWLRLKNWCPICKASAAPSQS 340

Query: 13  S 11
           S
Sbjct: 341 S 341


>ref|XP_010112096.1| E3 ubiquitin ligase BIG BROTHER [Morus notabilis]
           gi|587946382|gb|EXC32721.1| E3 ubiquitin ligase BIG
           BROTHER [Morus notabilis]
          Length = 555

 Score = 98.6 bits (244), Expect = 1e-18
 Identities = 40/63 (63%), Positives = 52/63 (82%)
 Frame = -2

Query: 199 VTGSFGNDNDIKCCICQEEFVYGDEIGKLGCQHGYHVACIEQWLRLKNWCPICKVFASRP 20
           V+G  G+++D+KC ICQEE+V GDE+G+L C+H YHVACI+QWLRLKNWCP+CK  A+  
Sbjct: 483 VSGRNGDNDDVKCSICQEEYVGGDEVGRLQCEHRYHVACIQQWLRLKNWCPVCKSSAAPS 542

Query: 19  KSS 11
            SS
Sbjct: 543 PSS 545


>ref|XP_009769247.1| PREDICTED: uncharacterized protein LOC104220129 [Nicotiana
           sylvestris]
          Length = 525

 Score = 98.2 bits (243), Expect = 2e-18
 Identities = 40/61 (65%), Positives = 50/61 (81%)
 Frame = -2

Query: 193 GSFGNDNDIKCCICQEEFVYGDEIGKLGCQHGYHVACIEQWLRLKNWCPICKVFASRPKS 14
           GS GN+++IKC ICQEE++ GDEIG+L C+HGYHV C++QWLR KNWCPICK  AS  + 
Sbjct: 461 GSDGNEDEIKCTICQEEYMIGDEIGRLECEHGYHVECVQQWLRHKNWCPICKSSASPSQP 520

Query: 13  S 11
           S
Sbjct: 521 S 521


>emb|CBI20761.3| unnamed protein product [Vitis vinifera]
          Length = 403

 Score = 97.4 bits (241), Expect = 3e-18
 Identities = 37/53 (69%), Positives = 46/53 (86%)
 Frame = -2

Query: 184 GNDNDIKCCICQEEFVYGDEIGKLGCQHGYHVACIEQWLRLKNWCPICKVFAS 26
           G+ +D+KC ICQEE++ GDE+GKL C+HGYHVACI QWLRLKNWCP+CK  A+
Sbjct: 350 GDGDDVKCSICQEEYMVGDEVGKLQCEHGYHVACIHQWLRLKNWCPVCKASAA 402


>ref|XP_002280551.1| PREDICTED: E3 ubiquitin-protein ligase RLIM [Vitis vinifera]
           gi|731385191|ref|XP_010648413.1| PREDICTED: E3
           ubiquitin-protein ligase RLIM [Vitis vinifera]
          Length = 550

 Score = 97.4 bits (241), Expect = 3e-18
 Identities = 37/53 (69%), Positives = 46/53 (86%)
 Frame = -2

Query: 184 GNDNDIKCCICQEEFVYGDEIGKLGCQHGYHVACIEQWLRLKNWCPICKVFAS 26
           G+ +D+KC ICQEE++ GDE+GKL C+HGYHVACI QWLRLKNWCP+CK  A+
Sbjct: 497 GDGDDVKCSICQEEYMVGDEVGKLQCEHGYHVACIHQWLRLKNWCPVCKASAA 549


>ref|XP_009600408.1| PREDICTED: E3 ubiquitin-protein ligase MBR1 [Nicotiana
           tomentosiformis]
          Length = 543

 Score = 97.1 bits (240), Expect = 4e-18
 Identities = 40/64 (62%), Positives = 50/64 (78%)
 Frame = -2

Query: 202 EVTGSFGNDNDIKCCICQEEFVYGDEIGKLGCQHGYHVACIEQWLRLKNWCPICKVFASR 23
           E + + G+ +DIKC ICQEE+V GDEIG LGC+HGYH+ CI+QW  LKNWCPICK  A+ 
Sbjct: 476 ETSEADGDGDDIKCSICQEEYVIGDEIGNLGCEHGYHLECIKQWFGLKNWCPICKAAAAP 535

Query: 22  PKSS 11
            +SS
Sbjct: 536 SESS 539


>gb|KGN60171.1| hypothetical protein Csa_3G881840 [Cucumis sativus]
          Length = 563

 Score = 96.7 bits (239), Expect = 5e-18
 Identities = 38/53 (71%), Positives = 46/53 (86%)
 Frame = -2

Query: 184 GNDNDIKCCICQEEFVYGDEIGKLGCQHGYHVACIEQWLRLKNWCPICKVFAS 26
           G  +D+KCCICQEE+V GDE+G+L C+H YHVACI+QWLRLKNWCPICK  A+
Sbjct: 505 GELSDVKCCICQEEYVSGDEVGRLQCEHQYHVACIQQWLRLKNWCPICKSSAA 557


>ref|XP_004136311.1| PREDICTED: uncharacterized protein LOC101218753 [Cucumis sativus]
           gi|778687228|ref|XP_011652530.1| PREDICTED:
           uncharacterized protein LOC101218753 [Cucumis sativus]
          Length = 537

 Score = 96.7 bits (239), Expect = 5e-18
 Identities = 38/53 (71%), Positives = 46/53 (86%)
 Frame = -2

Query: 184 GNDNDIKCCICQEEFVYGDEIGKLGCQHGYHVACIEQWLRLKNWCPICKVFAS 26
           G  +D+KCCICQEE+V GDE+G+L C+H YHVACI+QWLRLKNWCPICK  A+
Sbjct: 479 GELSDVKCCICQEEYVSGDEVGRLQCEHQYHVACIQQWLRLKNWCPICKSSAA 531


>ref|XP_009618305.1| PREDICTED: E3 ubiquitin-protein ligase MBR2 [Nicotiana
           tomentosiformis]
          Length = 519

 Score = 95.9 bits (237), Expect = 9e-18
 Identities = 38/56 (67%), Positives = 47/56 (83%)
 Frame = -2

Query: 193 GSFGNDNDIKCCICQEEFVYGDEIGKLGCQHGYHVACIEQWLRLKNWCPICKVFAS 26
           GS GN+++IKC ICQEE++ GDEIG+L C HGYHV C++QWLR KNWCPICK  A+
Sbjct: 461 GSDGNEDEIKCTICQEEYMIGDEIGRLECDHGYHVECVQQWLRHKNWCPICKSSAA 516


>ref|XP_007011597.1| RING/U-box superfamily protein, putative isoform 1 [Theobroma
           cacao] gi|508781960|gb|EOY29216.1| RING/U-box
           superfamily protein, putative isoform 1 [Theobroma
           cacao]
          Length = 494

 Score = 95.5 bits (236), Expect = 1e-17
 Identities = 38/58 (65%), Positives = 47/58 (81%)
 Frame = -2

Query: 184 GNDNDIKCCICQEEFVYGDEIGKLGCQHGYHVACIEQWLRLKNWCPICKVFASRPKSS 11
           G  +D+KC ICQEE+V GDE+G+L C+H YHVACI+QWLR+KNWCPICK  A   +SS
Sbjct: 433 GEKDDVKCSICQEEYVIGDEVGRLQCEHRYHVACIQQWLRVKNWCPICKASAEPMQSS 490


>ref|XP_012449263.1| PREDICTED: uncharacterized protein LOC105772518 isoform X1
           [Gossypium raimondii] gi|823233255|ref|XP_012449264.1|
           PREDICTED: uncharacterized protein LOC105772518 isoform
           X1 [Gossypium raimondii]
           gi|823233257|ref|XP_012449265.1| PREDICTED:
           uncharacterized protein LOC105772518 isoform X1
           [Gossypium raimondii] gi|823233259|ref|XP_012449266.1|
           PREDICTED: uncharacterized protein LOC105772518 isoform
           X1 [Gossypium raimondii] gi|763799010|gb|KJB65965.1|
           hypothetical protein B456_010G122800 [Gossypium
           raimondii] gi|763799012|gb|KJB65967.1| hypothetical
           protein B456_010G122800 [Gossypium raimondii]
           gi|763799013|gb|KJB65968.1| hypothetical protein
           B456_010G122800 [Gossypium raimondii]
           gi|763799014|gb|KJB65969.1| hypothetical protein
           B456_010G122800 [Gossypium raimondii]
          Length = 552

 Score = 95.1 bits (235), Expect = 2e-17
 Identities = 35/55 (63%), Positives = 46/55 (83%)
 Frame = -2

Query: 184 GNDNDIKCCICQEEFVYGDEIGKLGCQHGYHVACIEQWLRLKNWCPICKVFASRP 20
           G  +D+KC ICQEE+V GDE+G+L C+H YHVAC++QWLR+KNWCPICK  + +P
Sbjct: 489 GEKDDVKCSICQEEYVNGDEVGRLQCEHRYHVACVQQWLRVKNWCPICKASSEKP 543


>ref|XP_010928687.1| PREDICTED: E3 ubiquitin-protein ligase RNF12-like isoform X1
           [Elaeis guineensis] gi|743809673|ref|XP_010928689.1|
           PREDICTED: E3 ubiquitin-protein ligase RNF12-like
           isoform X1 [Elaeis guineensis]
          Length = 584

 Score = 95.1 bits (235), Expect = 2e-17
 Identities = 39/57 (68%), Positives = 44/57 (77%)
 Frame = -2

Query: 199 VTGSFGNDNDIKCCICQEEFVYGDEIGKLGCQHGYHVACIEQWLRLKNWCPICKVFA 29
           V+G  G + DIKC ICQEE+V GDE+GKL C+H YHV CI QWLR KNWCPICK  A
Sbjct: 524 VSGFTGYEEDIKCSICQEEYVVGDEVGKLACEHRYHVTCIHQWLRQKNWCPICKASA 580


>gb|KHG19601.1| RING finger protein [Gossypium arboreum]
          Length = 502

 Score = 95.1 bits (235), Expect = 2e-17
 Identities = 37/57 (64%), Positives = 46/57 (80%)
 Frame = -2

Query: 184 GNDNDIKCCICQEEFVYGDEIGKLGCQHGYHVACIEQWLRLKNWCPICKVFASRPKS 14
           G  NDIKC ICQEE+V GDE+G+L C+H YH+ACI++WLR+KNWCPICK  A   +S
Sbjct: 438 GEKNDIKCSICQEEYVIGDEVGRLHCEHRYHIACIQKWLRMKNWCPICKASAEPTQS 494


>ref|XP_008466306.1| PREDICTED: probable GPI-anchored adhesin-like protein PGA55
           [Cucumis melo]
          Length = 537

 Score = 95.1 bits (235), Expect = 2e-17
 Identities = 37/53 (69%), Positives = 47/53 (88%)
 Frame = -2

Query: 184 GNDNDIKCCICQEEFVYGDEIGKLGCQHGYHVACIEQWLRLKNWCPICKVFAS 26
           G+ +D+KCCICQEE+V GDE+G+L C+H +HVACI+QWLRLKNWCPICK  A+
Sbjct: 479 GDLSDVKCCICQEEYVSGDEVGRLRCEHKHHVACIQQWLRLKNWCPICKSSAT 531


>ref|XP_010456473.1| PREDICTED: uncharacterized RING finger protein C4G3.12c-like
           [Camelina sativa]
          Length = 629

 Score = 94.7 bits (234), Expect = 2e-17
 Identities = 38/59 (64%), Positives = 46/59 (77%)
 Frame = -2

Query: 190 SFGNDNDIKCCICQEEFVYGDEIGKLGCQHGYHVACIEQWLRLKNWCPICKVFASRPKS 14
           S   D+DIKC ICQEE+V GDE+G + CQH YHV+C++QWLR+KNWCPICK  A   KS
Sbjct: 525 SLVKDDDIKCSICQEEYVDGDEVGTMPCQHMYHVSCVQQWLRMKNWCPICKTSAEEEKS 583



 Score = 76.3 bits (186), Expect = 8e-12
 Identities = 32/58 (55%), Positives = 40/58 (68%), Gaps = 8/58 (13%)
 Frame = -2

Query: 163 CCICQ--------EEFVYGDEIGKLGCQHGYHVACIEQWLRLKNWCPICKVFASRPKS 14
           C IC+        EE+V GDE+G + CQH YHV+C++QWLR+KNWCPICK  A   KS
Sbjct: 571 CPICKTSAEEEKSEEYVDGDEVGTMPCQHMYHVSCVQQWLRMKNWCPICKTSAEEEKS 628


>ref|XP_010422822.1| PREDICTED: E3 ubiquitin-protein ligase RLIM-like [Camelina sativa]
          Length = 585

 Score = 94.7 bits (234), Expect = 2e-17
 Identities = 38/59 (64%), Positives = 46/59 (77%)
 Frame = -2

Query: 190 SFGNDNDIKCCICQEEFVYGDEIGKLGCQHGYHVACIEQWLRLKNWCPICKVFASRPKS 14
           S   D+DIKC ICQEE+V GDE+G + CQH YHV+C++QWLR+KNWCPICK  A   KS
Sbjct: 526 SLVKDDDIKCSICQEEYVDGDEVGTMPCQHMYHVSCVQQWLRMKNWCPICKTSAEEEKS 584


>emb|CDX78393.1| BnaA03g03050D [Brassica napus]
          Length = 494

 Score = 94.7 bits (234), Expect = 2e-17
 Identities = 37/59 (62%), Positives = 46/59 (77%)
 Frame = -2

Query: 190 SFGNDNDIKCCICQEEFVYGDEIGKLGCQHGYHVACIEQWLRLKNWCPICKVFASRPKS 14
           S   D+DIKC ICQEE+V GDE+G + C+H YHV+C++QWLR+KNWCPICK  A   KS
Sbjct: 435 SLNKDDDIKCSICQEEYVDGDEVGTMPCEHMYHVSCVQQWLRMKNWCPICKTSAEEEKS 493


>dbj|BAH19781.1| AT5G10650 [Arabidopsis thaliana]
          Length = 525

 Score = 94.7 bits (234), Expect = 2e-17
 Identities = 40/63 (63%), Positives = 48/63 (76%), Gaps = 2/63 (3%)
 Frame = -2

Query: 196 TGSFG--NDNDIKCCICQEEFVYGDEIGKLGCQHGYHVACIEQWLRLKNWCPICKVFASR 23
           TGS     D+DIKC ICQEE+V GDE+G + CQH YHV+C++QWLR+KNWCPICK  A  
Sbjct: 462 TGSISLYKDDDIKCSICQEEYVDGDELGTIPCQHMYHVSCVQQWLRMKNWCPICKTSAEE 521

Query: 22  PKS 14
            KS
Sbjct: 522 EKS 524


Top