BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Forsythia21_contig00016936
         (2026 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011087492.1| PREDICTED: RNA polymerase II-associated prot...   590   e-165
ref|XP_011087491.1| PREDICTED: RNA polymerase II-associated prot...   583   e-163
ref|XP_012840399.1| PREDICTED: RNA polymerase II-associated prot...   541   e-151
ref|XP_012840398.1| PREDICTED: RNA polymerase II-associated prot...   536   e-149
gb|EYU34893.1| hypothetical protein MIMGU_mgv1a005743mg [Erythra...   512   e-142
ref|XP_009767310.1| PREDICTED: RNA polymerase II-associated prot...   505   e-140
emb|CDP18255.1| unnamed protein product [Coffea canephora]            501   e-139
ref|XP_009611909.1| PREDICTED: RNA polymerase II-associated prot...   499   e-138
ref|XP_009767318.1| PREDICTED: RNA polymerase II-associated prot...   497   e-137
ref|XP_009767301.1| PREDICTED: RNA polymerase II-associated prot...   493   e-136
ref|XP_009611910.1| PREDICTED: RNA polymerase II-associated prot...   491   e-136
ref|XP_009767326.1| PREDICTED: RNA polymerase II-associated prot...   483   e-133
ref|XP_009611912.1| PREDICTED: RNA polymerase II-associated prot...   481   e-133
ref|XP_009611911.1| PREDICTED: RNA polymerase II-associated prot...   479   e-132
ref|XP_009767331.1| PREDICTED: RNA polymerase II-associated prot...   479   e-132
ref|XP_006339932.1| PREDICTED: RNA polymerase II-associated prot...   478   e-132
ref|XP_009767339.1| PREDICTED: RNA polymerase II-associated prot...   476   e-131
ref|XP_004248819.1| PREDICTED: RNA polymerase II-associated prot...   476   e-131
ref|XP_006339933.1| PREDICTED: RNA polymerase II-associated prot...   474   e-131
ref|XP_010327507.1| PREDICTED: RNA polymerase II-associated prot...   472   e-130

>ref|XP_011087492.1| PREDICTED: RNA polymerase II-associated protein 3 isoform X2 [Sesamum
            indicum]
          Length = 470

 Score =  590 bits (1521), Expect = e-165
 Identities = 318/477 (66%), Positives = 363/477 (76%), Gaps = 4/477 (0%)
 Frame = -1

Query: 1906 MAKVPSKHSRDQFQDFEGLLNNLQDWEXXXXXXXXXXXXXXXXXXXXXLPAQRHSMNSAS 1727
            MA+VPSKHSRDQ QDFEGLLNNLQDWE                        +   +  AS
Sbjct: 1    MARVPSKHSRDQAQDFEGLLNNLQDWELSFKDKDKKLRSDGVSE------GKLDLLGQAS 54

Query: 1726 QLSNGTGVNGKQPVGKTTASDNLGSGRQYDYLKDYDAISRLSGGFTAEES-VDANSEKEL 1550
            + +    VNGKQ + K+ +SDN  + RQYDYL +Y+A+SRLSGG  ++ES VDANSEKEL
Sbjct: 55   RSTASARVNGKQTMEKSPSSDNTSAVRQYDYLTEYEALSRLSGGIQSQESFVDANSEKEL 114

Query: 1549 GNEFFKQKKFNEAIDCYSRSIVFSPTAVAYANRAMAYIKVKRFQEAENDCTEALNLDDRY 1370
            GNEFFKQKKF +AIDCYSRSI  SPTAVAYANRAMAYIK+KRFQEAENDCTEALNLDDRY
Sbjct: 115  GNEFFKQKKFVDAIDCYSRSIALSPTAVAYANRAMAYIKLKRFQEAENDCTEALNLDDRY 174

Query: 1369 IKAYSRRSTARKELGKLKESFDDAAFALRLEPHNQEIKKQYAEVKSLLEKGILKKTSGAT 1190
            IKAYSRRSTARKELGKLKES DDA FALRLEP NQEIKKQYAE+KSLL+K ILKK SG  
Sbjct: 175  IKAYSRRSTARKELGKLKESIDDAEFALRLEPQNQEIKKQYAELKSLLQKEILKKASGGL 234

Query: 1189 QGSSQGVERAGKLKVDKSKPIHKVQSVSTSSPAGGVAEILKDNSEN---REVPAETSMEV 1019
             GS +G +  GK +VDK+K + K+Q+VSTSSP G VAEIL+++ E    R+V AETSMEV
Sbjct: 235  AGSVRGAQ-PGKPEVDKNKNVQKLQAVSTSSPEGRVAEILEEHPEGNNIRDVAAETSMEV 293

Query: 1018 ESSSLRTHRSHVDTGLVTVKSKHKNGRQELKPSVQXXXXXXXXXXXXXXXXNIVPPNSAY 839
            E++++R+     DTG  T K K K+ +QEL+ SVQ                NIVPPNSAY
Sbjct: 294  ETNNIRSTGFKPDTGSGTAKKKTKDTKQELRASVQELAAKAASLAKAEAAKNIVPPNSAY 353

Query: 838  QFEVSWRGLSGDRNLQARLLKVTPATALPGIFKNALSAPMLVDIIRCIATFFMEDMDLGV 659
            QFEVSWRG SGDR+LQARLLKVT  TALPGIFKNALSA +LVD+IRCIATFF EDM LGV
Sbjct: 354  QFEVSWRGFSGDRDLQARLLKVTSPTALPGIFKNALSASILVDVIRCIATFFTEDMALGV 413

Query: 658  KYLENLTKVPRFDMIIMCLSPSDKADLHKIWNEAFSKGTPDYAEKLGNLRSRYGVKQ 488
            +YL+NL K+PRFDMIIMCLSP DKADL KIWNE FSKG  DY + LGNLR RYG+KQ
Sbjct: 414  EYLQNLAKIPRFDMIIMCLSPLDKADLSKIWNEVFSKGMTDYTDILGNLRLRYGIKQ 470


>ref|XP_011087491.1| PREDICTED: RNA polymerase II-associated protein 3 isoform X1 [Sesamum
            indicum]
          Length = 476

 Score =  583 bits (1504), Expect = e-163
 Identities = 318/483 (65%), Positives = 363/483 (75%), Gaps = 10/483 (2%)
 Frame = -1

Query: 1906 MAKVPSKHSRDQFQD------FEGLLNNLQDWEXXXXXXXXXXXXXXXXXXXXXLPAQRH 1745
            MA+VPSKHSRDQ QD      FEGLLNNLQDWE                        +  
Sbjct: 1    MARVPSKHSRDQAQDCLTGQDFEGLLNNLQDWELSFKDKDKKLRSDGVSE------GKLD 54

Query: 1744 SMNSASQLSNGTGVNGKQPVGKTTASDNLGSGRQYDYLKDYDAISRLSGGFTAEES-VDA 1568
             +  AS+ +    VNGKQ + K+ +SDN  + RQYDYL +Y+A+SRLSGG  ++ES VDA
Sbjct: 55   LLGQASRSTASARVNGKQTMEKSPSSDNTSAVRQYDYLTEYEALSRLSGGIQSQESFVDA 114

Query: 1567 NSEKELGNEFFKQKKFNEAIDCYSRSIVFSPTAVAYANRAMAYIKVKRFQEAENDCTEAL 1388
            NSEKELGNEFFKQKKF +AIDCYSRSI  SPTAVAYANRAMAYIK+KRFQEAENDCTEAL
Sbjct: 115  NSEKELGNEFFKQKKFVDAIDCYSRSIALSPTAVAYANRAMAYIKLKRFQEAENDCTEAL 174

Query: 1387 NLDDRYIKAYSRRSTARKELGKLKESFDDAAFALRLEPHNQEIKKQYAEVKSLLEKGILK 1208
            NLDDRYIKAYSRRSTARKELGKLKES DDA FALRLEP NQEIKKQYAE+KSLL+K ILK
Sbjct: 175  NLDDRYIKAYSRRSTARKELGKLKESIDDAEFALRLEPQNQEIKKQYAELKSLLQKEILK 234

Query: 1207 KTSGATQGSSQGVERAGKLKVDKSKPIHKVQSVSTSSPAGGVAEILKDNSEN---REVPA 1037
            K SG   GS +G +  GK +VDK+K + K+Q+VSTSSP G VAEIL+++ E    R+V A
Sbjct: 235  KASGGLAGSVRGAQ-PGKPEVDKNKNVQKLQAVSTSSPEGRVAEILEEHPEGNNIRDVAA 293

Query: 1036 ETSMEVESSSLRTHRSHVDTGLVTVKSKHKNGRQELKPSVQXXXXXXXXXXXXXXXXNIV 857
            ETSMEVE++++R+     DTG  T K K K+ +QEL+ SVQ                NIV
Sbjct: 294  ETSMEVETNNIRSTGFKPDTGSGTAKKKTKDTKQELRASVQELAAKAASLAKAEAAKNIV 353

Query: 856  PPNSAYQFEVSWRGLSGDRNLQARLLKVTPATALPGIFKNALSAPMLVDIIRCIATFFME 677
            PPNSAYQFEVSWRG SGDR+LQARLLKVT  TALPGIFKNALSA +LVD+IRCIATFF E
Sbjct: 354  PPNSAYQFEVSWRGFSGDRDLQARLLKVTSPTALPGIFKNALSASILVDVIRCIATFFTE 413

Query: 676  DMDLGVKYLENLTKVPRFDMIIMCLSPSDKADLHKIWNEAFSKGTPDYAEKLGNLRSRYG 497
            DM LGV+YL+NL K+PRFDMIIMCLSP DKADL KIWNE FSKG  DY + LGNLR RYG
Sbjct: 414  DMALGVEYLQNLAKIPRFDMIIMCLSPLDKADLSKIWNEVFSKGMTDYTDILGNLRLRYG 473

Query: 496  VKQ 488
            +KQ
Sbjct: 474  IKQ 476


>ref|XP_012840399.1| PREDICTED: RNA polymerase II-associated protein 3 isoform X2
            [Erythranthe guttatus]
          Length = 469

 Score =  541 bits (1395), Expect = e-151
 Identities = 296/476 (62%), Positives = 347/476 (72%), Gaps = 4/476 (0%)
 Frame = -1

Query: 1906 MAKVPSKHSRDQFQDFEGLLNNLQDWEXXXXXXXXXXXXXXXXXXXXXLPAQRHSMNSAS 1727
            MAK PSKHSRD  Q+ EGLLNNLQDWE                         + S N+  
Sbjct: 1    MAKTPSKHSRDLPQELEGLLNNLQDWELSFKEKDKKMRSDAVGKAKLKDQLGQPSGNNVG 60

Query: 1726 QLSNGTGVNGKQPVGKTTASDNLGSGRQYDYLKDYDAISRLSGGFTAEES-VDANSEKEL 1550
            +  +   V+ KQ + KT + +N  + +QYD+LK+Y+A+SRLS    + ES VDANSEKEL
Sbjct: 61   RPYDSAKVHRKQTMEKTPSYENPSTVKQYDHLKEYEALSRLSSAVPSTESFVDANSEKEL 120

Query: 1549 GNEFFKQKKFNEAIDCYSRSIVFSPTAVAYANRAMAYIKVKRFQEAENDCTEALNLDDRY 1370
            GNEFFKQKKF EAIDCYSRSI  SP+AVAYANRAMAYIK++RFQEAENDCTEALNLDDRY
Sbjct: 121  GNEFFKQKKFTEAIDCYSRSIALSPSAVAYANRAMAYIKIRRFQEAENDCTEALNLDDRY 180

Query: 1369 IKAYSRRSTARKELGKLKESFDDAAFALRLEPHNQEIKKQYAEVKSLLEKGILKKTSGAT 1190
            IKAYSRRSTARKELGKLKES DDA FALRLEP NQEIKKQ+AE KSLLEK ILKK SGA 
Sbjct: 181  IKAYSRRSTARKELGKLKESMDDAEFALRLEPQNQEIKKQFAESKSLLEKAILKKVSGAL 240

Query: 1189 QGSSQGVERAGKLKVDKSKPIHKVQSVSTSSPAGGVAEILKDN---SENREVPAETSMEV 1019
             GS +G +  GK +VDK+  + K  S       G V EIL++N   +++REV A+TSME+
Sbjct: 241  TGSVEGAQ-PGKSEVDKNNNVQKPLS-------GRVTEILEENPKGNKSREVTADTSMEI 292

Query: 1018 ESSSLRTHRSHVDTGLVTVKSKHKNGRQELKPSVQXXXXXXXXXXXXXXXXNIVPPNSAY 839
            + +S+R++ S V T   T K+K KNG+Q+LK SVQ                NIVPPNSAY
Sbjct: 293  KQNSVRSNGSDVITDSETAKTKPKNGKQQLKASVQELAAKAANLAKAEAAKNIVPPNSAY 352

Query: 838  QFEVSWRGLSGDRNLQARLLKVTPATALPGIFKNALSAPMLVDIIRCIATFFMEDMDLGV 659
            QFEVSWRGLS DRNLQ RLL+VT   ALPGIFKNALSAP+LVDIIRCIATFF+EDM L V
Sbjct: 353  QFEVSWRGLSNDRNLQTRLLQVTSPAALPGIFKNALSAPILVDIIRCIATFFVEDMALAV 412

Query: 658  KYLENLTKVPRFDMIIMCLSPSDKADLHKIWNEAFSKGTPDYAEKLGNLRSRYGVK 491
             YL+NLTK+PRFDMIIMCLS +DK+D+ KIW+E F KGT DY E L +LR RYG+K
Sbjct: 413  DYLQNLTKIPRFDMIIMCLSSADKSDVSKIWDEVFIKGTADYGEILRDLRIRYGIK 468


>ref|XP_012840398.1| PREDICTED: RNA polymerase II-associated protein 3 isoform X1
            [Erythranthe guttatus] gi|604329640|gb|EYU34894.1|
            hypothetical protein MIMGU_mgv1a005743mg [Erythranthe
            guttata]
          Length = 472

 Score =  536 bits (1381), Expect = e-149
 Identities = 296/479 (61%), Positives = 347/479 (72%), Gaps = 7/479 (1%)
 Frame = -1

Query: 1906 MAKVPSKHSRDQFQDFEGLLNNLQDWEXXXXXXXXXXXXXXXXXXXXXLPAQRHSMNSAS 1727
            MAK PSKHSRD  Q+ EGLLNNLQDWE                         + S N+  
Sbjct: 1    MAKTPSKHSRDLPQELEGLLNNLQDWELSFKEKDKKMRSDAVGKAKLKDQLGQPSGNNVG 60

Query: 1726 QLSNGTGVNGKQPVGKTTASDNLGSGRQYDYLKDYDAISRLSGGFTAEES-VDANSEKEL 1550
            +  +   V+ KQ + KT + +N  + +QYD+LK+Y+A+SRLS    + ES VDANSEKEL
Sbjct: 61   RPYDSAKVHRKQTMEKTPSYENPSTVKQYDHLKEYEALSRLSSAVPSTESFVDANSEKEL 120

Query: 1549 GNEFFKQKKFNEAIDCYSRSIVFSPTAVAYANRAMAYIKVKRFQEAENDCTEALNLDDRY 1370
            GNEFFKQKKF EAIDCYSRSI  SP+AVAYANRAMAYIK++RFQEAENDCTEALNLDDRY
Sbjct: 121  GNEFFKQKKFTEAIDCYSRSIALSPSAVAYANRAMAYIKIRRFQEAENDCTEALNLDDRY 180

Query: 1369 IKAYSRRSTARKELGKLKESFDDAAFALRLEPHNQEIKKQYAEVKSLLEKGILKKTSGAT 1190
            IKAYSRRSTARKELGKLKES DDA FALRLEP NQEIKKQ+AE KSLLEK ILKK SGA 
Sbjct: 181  IKAYSRRSTARKELGKLKESMDDAEFALRLEPQNQEIKKQFAESKSLLEKAILKKVSGAL 240

Query: 1189 QGSSQGVERAGKLKVDKSKPIHKVQSVSTSSPAGGVAEILKDN---SENREVPAETSMEV 1019
             GS +G +  GK +VDK+  + K  S       G V EIL++N   +++REV A+TSME+
Sbjct: 241  TGSVEGAQ-PGKSEVDKNNNVQKPLS-------GRVTEILEENPKGNKSREVTADTSMEI 292

Query: 1018 ESSSLRTHRSHVDTGLVTVK---SKHKNGRQELKPSVQXXXXXXXXXXXXXXXXNIVPPN 848
            + +S+R++ S V T   T K   +K KNG+Q+LK SVQ                NIVPPN
Sbjct: 293  KQNSVRSNGSDVITDSETAKLSQTKPKNGKQQLKASVQELAAKAANLAKAEAAKNIVPPN 352

Query: 847  SAYQFEVSWRGLSGDRNLQARLLKVTPATALPGIFKNALSAPMLVDIIRCIATFFMEDMD 668
            SAYQFEVSWRGLS DRNLQ RLL+VT   ALPGIFKNALSAP+LVDIIRCIATFF+EDM 
Sbjct: 353  SAYQFEVSWRGLSNDRNLQTRLLQVTSPAALPGIFKNALSAPILVDIIRCIATFFVEDMA 412

Query: 667  LGVKYLENLTKVPRFDMIIMCLSPSDKADLHKIWNEAFSKGTPDYAEKLGNLRSRYGVK 491
            L V YL+NLTK+PRFDMIIMCLS +DK+D+ KIW+E F KGT DY E L +LR RYG+K
Sbjct: 413  LAVDYLQNLTKIPRFDMIIMCLSSADKSDVSKIWDEVFIKGTADYGEILRDLRIRYGIK 471


>gb|EYU34893.1| hypothetical protein MIMGU_mgv1a005743mg [Erythranthe guttata]
          Length = 462

 Score =  512 bits (1319), Expect = e-142
 Identities = 288/479 (60%), Positives = 338/479 (70%), Gaps = 7/479 (1%)
 Frame = -1

Query: 1906 MAKVPSKHSRDQFQDFEGLLNNLQDWEXXXXXXXXXXXXXXXXXXXXXLPAQRHSMNSAS 1727
            MAK PSKHSRD            QDWE                         + S N+  
Sbjct: 1    MAKTPSKHSRDL----------PQDWELSFKEKDKKMRSDAVGKAKLKDQLGQPSGNNVG 50

Query: 1726 QLSNGTGVNGKQPVGKTTASDNLGSGRQYDYLKDYDAISRLSGGFTAEES-VDANSEKEL 1550
            +  +   V+ KQ + KT + +N  + +QYD+LK+Y+A+SRLS    + ES VDANSEKEL
Sbjct: 51   RPYDSAKVHRKQTMEKTPSYENPSTVKQYDHLKEYEALSRLSSAVPSTESFVDANSEKEL 110

Query: 1549 GNEFFKQKKFNEAIDCYSRSIVFSPTAVAYANRAMAYIKVKRFQEAENDCTEALNLDDRY 1370
            GNEFFKQKKF EAIDCYSRSI  SP+AVAYANRAMAYIK++RFQEAENDCTEALNLDDRY
Sbjct: 111  GNEFFKQKKFTEAIDCYSRSIALSPSAVAYANRAMAYIKIRRFQEAENDCTEALNLDDRY 170

Query: 1369 IKAYSRRSTARKELGKLKESFDDAAFALRLEPHNQEIKKQYAEVKSLLEKGILKKTSGAT 1190
            IKAYSRRSTARKELGKLKES DDA FALRLEP NQEIKKQ+AE KSLLEK ILKK SGA 
Sbjct: 171  IKAYSRRSTARKELGKLKESMDDAEFALRLEPQNQEIKKQFAESKSLLEKAILKKVSGAL 230

Query: 1189 QGSSQGVERAGKLKVDKSKPIHKVQSVSTSSPAGGVAEILKDN---SENREVPAETSMEV 1019
             GS +G +  GK +VDK+  + K  S       G V EIL++N   +++REV A+TSME+
Sbjct: 231  TGSVEGAQ-PGKSEVDKNNNVQKPLS-------GRVTEILEENPKGNKSREVTADTSMEI 282

Query: 1018 ESSSLRTHRSHVDTGLVTVK---SKHKNGRQELKPSVQXXXXXXXXXXXXXXXXNIVPPN 848
            + +S+R++ S V T   T K   +K KNG+Q+LK SVQ                NIVPPN
Sbjct: 283  KQNSVRSNGSDVITDSETAKLSQTKPKNGKQQLKASVQELAAKAANLAKAEAAKNIVPPN 342

Query: 847  SAYQFEVSWRGLSGDRNLQARLLKVTPATALPGIFKNALSAPMLVDIIRCIATFFMEDMD 668
            SAYQFEVSWRGLS DRNLQ RLL+VT   ALPGIFKNALSAP+LVDIIRCIATFF+EDM 
Sbjct: 343  SAYQFEVSWRGLSNDRNLQTRLLQVTSPAALPGIFKNALSAPILVDIIRCIATFFVEDMA 402

Query: 667  LGVKYLENLTKVPRFDMIIMCLSPSDKADLHKIWNEAFSKGTPDYAEKLGNLRSRYGVK 491
            L V YL+NLTK+PRFDMIIMCLS +DK+D+ KIW+E F KGT DY E L +LR RYG+K
Sbjct: 403  LAVDYLQNLTKIPRFDMIIMCLSSADKSDVSKIWDEVFIKGTADYGEILRDLRIRYGIK 461


>ref|XP_009767310.1| PREDICTED: RNA polymerase II-associated protein 3 isoform X2
            [Nicotiana sylvestris]
          Length = 464

 Score =  505 bits (1301), Expect = e-140
 Identities = 282/477 (59%), Positives = 329/477 (68%), Gaps = 6/477 (1%)
 Frame = -1

Query: 1906 MAKVPSKHSRDQFQDFEGLLNNLQDWEXXXXXXXXXXXXXXXXXXXXXLPAQRHSMNSAS 1727
            MA+VP KH+RDQFQD +GLLNNLQDWE                         R   +  S
Sbjct: 1    MARVPGKHTRDQFQDMQGLLNNLQDWELSLKDKDKKMKSQARGKEKL-----REDWSHTS 55

Query: 1726 QLSNGTGVNGKQPVGKTTASDNLGSGRQYDYLKDYDAISRLSGGFTAEES-VDANSEKEL 1550
            +L  G  VNG Q VGK+T     G+   YDY K Y+  S LS    +EES +DANSEKEL
Sbjct: 56   ELPTGPQVNGTQRVGKSTLIS--GAAGPYDYSKKYNPTSHLSSEMLSEESNIDANSEKEL 113

Query: 1549 GNEFFKQKKFNEAIDCYSRSIVFSPTAVAYANRAMAYIKVKRFQEAENDCTEALNLDDRY 1370
            GNEFFKQKKF EAIDCYSRSI  SPTAVAYANRAMAY+K+KRFQEAENDCTEALNLDDRY
Sbjct: 114  GNEFFKQKKFKEAIDCYSRSIALSPTAVAYANRAMAYLKLKRFQEAENDCTEALNLDDRY 173

Query: 1369 IKAYSRRSTARKELGKLKESFDDAAFALRLEPHNQEIKKQYAEVKSLLEKGILKKTSGAT 1190
            IKAYSRRSTARKELGKLKES +DA FA RLEP NQEIKKQY EVK+L EK ILK+ SGAT
Sbjct: 174  IKAYSRRSTARKELGKLKESIEDAEFASRLEPQNQEIKKQYGEVKALYEKEILKRVSGAT 233

Query: 1189 QGSSQGVERAGKLKVDKSKPIHKVQSVSTSSPAGGVAEILKDNSENREVPAETSMEVESS 1010
              S+QG +  G  K +K+ P+  +QSV +S     V +I    S +R+VP  T+MEVE +
Sbjct: 234  GVSAQGAQNTG--KTNKTGPV--IQSVGSSQKVAEVRKIPAKES-SRDVPG-TAMEVEDT 287

Query: 1009 SLRTHRSHVDTG-----LVTVKSKHKNGRQELKPSVQXXXXXXXXXXXXXXXXNIVPPNS 845
             ++ +    D       L   K  HKN +QELK SVQ                NI PPNS
Sbjct: 288  HMQINSKGSDASATVPTLNPAKRPHKNSKQELKESVQELAARAASLAKAEAAKNIAPPNS 347

Query: 844  AYQFEVSWRGLSGDRNLQARLLKVTPATALPGIFKNALSAPMLVDIIRCIATFFMEDMDL 665
            AYQFEVSWRGLSGDR+LQ  LLKVT  + LP IFKNALSAPML+DI+RC+ATF +EDMDL
Sbjct: 348  AYQFEVSWRGLSGDRDLQTHLLKVTSPSMLPQIFKNALSAPMLMDIVRCVATFSIEDMDL 407

Query: 664  GVKYLENLTKVPRFDMIIMCLSPSDKADLHKIWNEAFSKGTPDYAEKLGNLRSRYGV 494
             ++YLENLTKVPRFDMIIMCLS +DKA+L KIW+E F KG  +++  LG LR +YG+
Sbjct: 408  AIRYLENLTKVPRFDMIIMCLSSTDKAELVKIWDEVFCKGAEEHSATLGALRLKYGL 464


>emb|CDP18255.1| unnamed protein product [Coffea canephora]
          Length = 466

 Score =  501 bits (1290), Expect = e-139
 Identities = 272/481 (56%), Positives = 337/481 (70%), Gaps = 12/481 (2%)
 Frame = -1

Query: 1906 MAKVPSKHSRDQFQDFEGLLNNLQDWEXXXXXXXXXXXXXXXXXXXXXLPAQRHSMNSAS 1727
            M++VPSKHSRDQ QDFEGLLNNLQDWE                     L AQRH++ +A+
Sbjct: 1    MSRVPSKHSRDQAQDFEGLLNNLQDWELSFKDKDKKLKSQSRGKEKADLLAQRHNVANAN 60

Query: 1726 QLSNGTGVNGKQPVGKTTASDNLGSGRQYDYLKDYDAISRLSGGFTAEES-VDANSEKEL 1550
            QLS+ + V  +  V K    D   + ++YDYL++YDA+ +LS  F  EES VDANSEKEL
Sbjct: 61   QLSSSSRVGERHAVEKNANEDIGDAAKKYDYLRNYDAMRQLSSSFMTEESSVDANSEKEL 120

Query: 1549 GNEFFKQKKFNEAIDCYSRSIVFSPTAVAYANRAMAYIKVKRFQEAENDCTEALNLDDRY 1370
            GNE+FK KKFNEAIDCYSRSI                     F+EAE+DCTEALNLDDRY
Sbjct: 121  GNEYFKHKKFNEAIDCYSRSIAL-------------------FEEAESDCTEALNLDDRY 161

Query: 1369 IKAYSRRSTARKELGKLKESFDDAAFALRLEPHNQEIKKQYAEVKSLLEKGILKKTSGAT 1190
            IKAYSRRSTARKELGKLKE++DDA FALRLEP NQEIKKQYAE KSLL+K ILKK S A+
Sbjct: 162  IKAYSRRSTARKELGKLKEAYDDAEFALRLEPQNQEIKKQYAEAKSLLDKEILKKVSRAS 221

Query: 1189 QGSSQGVERAGKLKVDKSKPIHKVQSVSTSSPAGGVAEILKDNSE--NREVPAETSMEVE 1016
              S QG+++AGK KV+ +K ++ V+ VS+   +G VAE+  D+++  N E+P +T+M ++
Sbjct: 222  TSSVQGLQKAGKSKVETNKAVNGVKPVSSDFNSGMVAEVQDDHTKGNNGEIPLKTAMRLD 281

Query: 1015 SSSLRT--------HRSHV-DTGLVTVKSKHKNGRQELKPSVQXXXXXXXXXXXXXXXXN 863
             +S+++        H S + +T L T K    NG+ ELK SVQ                 
Sbjct: 282  GTSMKSKDQNGNASHESALQNTALETTKRSSTNGKHELKTSVQELAARAATLAKAEAAKI 341

Query: 862  IVPPNSAYQFEVSWRGLSGDRNLQARLLKVTPATALPGIFKNALSAPMLVDIIRCIATFF 683
            I PPNSAYQFEVSWRGLSGDR+LQA+LLK TP T+LP IFKNALSA +L+DI+ CIATFF
Sbjct: 342  IAPPNSAYQFEVSWRGLSGDRSLQAQLLKATPPTSLPQIFKNALSASLLMDILGCIATFF 401

Query: 682  MEDMDLGVKYLENLTKVPRFDMIIMCLSPSDKADLHKIWNEAFSKGTPDYAEKLGNLRSR 503
            +ED+DL VK+LENLTK+PRFDMI+MCLS +DKADL ++WNE FS+ TP+YAE L  LRSR
Sbjct: 402  IEDVDLAVKFLENLTKIPRFDMIVMCLSSADKADLFRMWNEVFSQTTPEYAEILSRLRSR 461

Query: 502  Y 500
            Y
Sbjct: 462  Y 462


>ref|XP_009611909.1| PREDICTED: RNA polymerase II-associated protein 3 isoform X1
            [Nicotiana tomentosiformis]
          Length = 465

 Score =  499 bits (1286), Expect = e-138
 Identities = 279/477 (58%), Positives = 321/477 (67%), Gaps = 6/477 (1%)
 Frame = -1

Query: 1906 MAKVPSKHSRDQFQDFEGLLNNLQDWEXXXXXXXXXXXXXXXXXXXXXLPAQRHSMNSAS 1727
            MA+VPSKHSRDQFQD +GLLN LQDWE                         R   +  S
Sbjct: 1    MARVPSKHSRDQFQDMQGLLNTLQDWELSLKDKDKKMKSQARGKEKL-----REDWSHTS 55

Query: 1726 QLSNGTGVNGKQPVGKTTASDNLGSGRQYDYLKDYDAISRLSGGFTAEES-VDANSEKEL 1550
            +L  G  V G Q VGK+T+  +      YDY K Y+  S LS    +EES +DANSEKEL
Sbjct: 56   ELPTGPQVTGTQRVGKSTSISSAAG--PYDYSKKYNPTSHLSSEMLSEESNIDANSEKEL 113

Query: 1549 GNEFFKQKKFNEAIDCYSRSIVFSPTAVAYANRAMAYIKVKRFQEAENDCTEALNLDDRY 1370
            GNEFFKQKKF EAI CYSRSI  SPTAVAYANRAMAY+K+KRFQEAENDCTEALNLDDRY
Sbjct: 114  GNEFFKQKKFKEAIICYSRSIALSPTAVAYANRAMAYLKIKRFQEAENDCTEALNLDDRY 173

Query: 1369 IKAYSRRSTARKELGKLKESFDDAAFALRLEPHNQEIKKQYAEVKSLLEKGILKKTSGAT 1190
            IKAYSRRSTARKELGKLKES +DA FA RLEP NQEIKKQY EVK+L EK ILK+ S AT
Sbjct: 174  IKAYSRRSTARKELGKLKESIEDAEFASRLEPQNQEIKKQYGEVKALYEKEILKRVSAAT 233

Query: 1189 QGSSQGVERAGKLKVDKSKPIHKVQSVSTSSPAGGVAEILKDNSENREVPAETSMEVESS 1010
              S+QG ++ G  K +K+ P+  +QSVS SS        +     NR+VP  T+MEVE +
Sbjct: 234  GVSAQGAQKTG--KTNKTGPV--IQSVSGSSQKVAEVRKIPAKENNRDVPG-TAMEVEDT 288

Query: 1009 SLRTHRSHVDTG-----LVTVKSKHKNGRQELKPSVQXXXXXXXXXXXXXXXXNIVPPNS 845
             ++ +    D       L   K  HKN +QELK SVQ                NI PPNS
Sbjct: 289  HMQINSKDSDASATVPTLNPAKRTHKNSKQELKESVQELAARAASLAKAEAAKNIAPPNS 348

Query: 844  AYQFEVSWRGLSGDRNLQARLLKVTPATALPGIFKNALSAPMLVDIIRCIATFFMEDMDL 665
            AYQFEVSWRGLSGDRNLQ  LLKVT    LP IFKNALSAPML+DI+RC+ATF +EDMDL
Sbjct: 349  AYQFEVSWRGLSGDRNLQTHLLKVTSPATLPQIFKNALSAPMLMDIVRCVATFSIEDMDL 408

Query: 664  GVKYLENLTKVPRFDMIIMCLSPSDKADLHKIWNEAFSKGTPDYAEKLGNLRSRYGV 494
             ++YLENLTKVPRFDMIIMCLS +DKA+L KIW+E F KG  ++   L  LR  YG+
Sbjct: 409  AIRYLENLTKVPRFDMIIMCLSSTDKAELVKIWDEVFCKGAEEHTATLSALRLNYGL 465


>ref|XP_009767318.1| PREDICTED: RNA polymerase II-associated protein 3 isoform X3
            [Nicotiana sylvestris]
          Length = 461

 Score =  497 bits (1279), Expect = e-137
 Identities = 281/477 (58%), Positives = 327/477 (68%), Gaps = 6/477 (1%)
 Frame = -1

Query: 1906 MAKVPSKHSRDQFQDFEGLLNNLQDWEXXXXXXXXXXXXXXXXXXXXXLPAQRHSMNSAS 1727
            MA+VP KH+RDQFQ   GLLNNLQDWE                         R   +  S
Sbjct: 1    MARVPGKHTRDQFQ---GLLNNLQDWELSLKDKDKKMKSQARGKEKL-----REDWSHTS 52

Query: 1726 QLSNGTGVNGKQPVGKTTASDNLGSGRQYDYLKDYDAISRLSGGFTAEES-VDANSEKEL 1550
            +L  G  VNG Q VGK+T     G+   YDY K Y+  S LS    +EES +DANSEKEL
Sbjct: 53   ELPTGPQVNGTQRVGKSTLIS--GAAGPYDYSKKYNPTSHLSSEMLSEESNIDANSEKEL 110

Query: 1549 GNEFFKQKKFNEAIDCYSRSIVFSPTAVAYANRAMAYIKVKRFQEAENDCTEALNLDDRY 1370
            GNEFFKQKKF EAIDCYSRSI  SPTAVAYANRAMAY+K+KRFQEAENDCTEALNLDDRY
Sbjct: 111  GNEFFKQKKFKEAIDCYSRSIALSPTAVAYANRAMAYLKLKRFQEAENDCTEALNLDDRY 170

Query: 1369 IKAYSRRSTARKELGKLKESFDDAAFALRLEPHNQEIKKQYAEVKSLLEKGILKKTSGAT 1190
            IKAYSRRSTARKELGKLKES +DA FA RLEP NQEIKKQY EVK+L EK ILK+ SGAT
Sbjct: 171  IKAYSRRSTARKELGKLKESIEDAEFASRLEPQNQEIKKQYGEVKALYEKEILKRVSGAT 230

Query: 1189 QGSSQGVERAGKLKVDKSKPIHKVQSVSTSSPAGGVAEILKDNSENREVPAETSMEVESS 1010
              S+QG +  G  K +K+ P+  +QSV +S     V +I    S +R+VP  T+MEVE +
Sbjct: 231  GVSAQGAQNTG--KTNKTGPV--IQSVGSSQKVAEVRKIPAKES-SRDVPG-TAMEVEDT 284

Query: 1009 SLRTHRSHVDTG-----LVTVKSKHKNGRQELKPSVQXXXXXXXXXXXXXXXXNIVPPNS 845
             ++ +    D       L   K  HKN +QELK SVQ                NI PPNS
Sbjct: 285  HMQINSKGSDASATVPTLNPAKRPHKNSKQELKESVQELAARAASLAKAEAAKNIAPPNS 344

Query: 844  AYQFEVSWRGLSGDRNLQARLLKVTPATALPGIFKNALSAPMLVDIIRCIATFFMEDMDL 665
            AYQFEVSWRGLSGDR+LQ  LLKVT  + LP IFKNALSAPML+DI+RC+ATF +EDMDL
Sbjct: 345  AYQFEVSWRGLSGDRDLQTHLLKVTSPSMLPQIFKNALSAPMLMDIVRCVATFSIEDMDL 404

Query: 664  GVKYLENLTKVPRFDMIIMCLSPSDKADLHKIWNEAFSKGTPDYAEKLGNLRSRYGV 494
             ++YLENLTKVPRFDMIIMCLS +DKA+L KIW+E F KG  +++  LG LR +YG+
Sbjct: 405  AIRYLENLTKVPRFDMIIMCLSSTDKAELVKIWDEVFCKGAEEHSATLGALRLKYGL 461


>ref|XP_009767301.1| PREDICTED: RNA polymerase II-associated protein 3 isoform X1
            [Nicotiana sylvestris]
          Length = 484

 Score =  493 bits (1270), Expect = e-136
 Identities = 282/497 (56%), Positives = 329/497 (66%), Gaps = 26/497 (5%)
 Frame = -1

Query: 1906 MAKVPSKHSRDQFQ--------------------DFEGLLNNLQDWEXXXXXXXXXXXXX 1787
            MA+VP KH+RDQFQ                    D +GLLNNLQDWE             
Sbjct: 1    MARVPGKHTRDQFQGFICSILSGLWFYWHYLADQDMQGLLNNLQDWELSLKDKDKKMKSQ 60

Query: 1786 XXXXXXXXLPAQRHSMNSASQLSNGTGVNGKQPVGKTTASDNLGSGRQYDYLKDYDAISR 1607
                        R   +  S+L  G  VNG Q VGK+T     G+   YDY K Y+  S 
Sbjct: 61   ARGKEKL-----REDWSHTSELPTGPQVNGTQRVGKSTLIS--GAAGPYDYSKKYNPTSH 113

Query: 1606 LSGGFTAEES-VDANSEKELGNEFFKQKKFNEAIDCYSRSIVFSPTAVAYANRAMAYIKV 1430
            LS    +EES +DANSEKELGNEFFKQKKF EAIDCYSRSI  SPTAVAYANRAMAY+K+
Sbjct: 114  LSSEMLSEESNIDANSEKELGNEFFKQKKFKEAIDCYSRSIALSPTAVAYANRAMAYLKL 173

Query: 1429 KRFQEAENDCTEALNLDDRYIKAYSRRSTARKELGKLKESFDDAAFALRLEPHNQEIKKQ 1250
            KRFQEAENDCTEALNLDDRYIKAYSRRSTARKELGKLKES +DA FA RLEP NQEIKKQ
Sbjct: 174  KRFQEAENDCTEALNLDDRYIKAYSRRSTARKELGKLKESIEDAEFASRLEPQNQEIKKQ 233

Query: 1249 YAEVKSLLEKGILKKTSGATQGSSQGVERAGKLKVDKSKPIHKVQSVSTSSPAGGVAEIL 1070
            Y EVK+L EK ILK+ SGAT  S+QG +  G  K +K+ P+  +QSV +S     V +I 
Sbjct: 234  YGEVKALYEKEILKRVSGATGVSAQGAQNTG--KTNKTGPV--IQSVGSSQKVAEVRKIP 289

Query: 1069 KDNSENREVPAETSMEVESSSLRTHRSHVDTG-----LVTVKSKHKNGRQELKPSVQXXX 905
               S +R+VP  T+MEVE + ++ +    D       L   K  HKN +QELK SVQ   
Sbjct: 290  AKES-SRDVPG-TAMEVEDTHMQINSKGSDASATVPTLNPAKRPHKNSKQELKESVQELA 347

Query: 904  XXXXXXXXXXXXXNIVPPNSAYQFEVSWRGLSGDRNLQARLLKVTPATALPGIFKNALSA 725
                         NI PPNSAYQFEVSWRGLSGDR+LQ  LLKVT  + LP IFKNALSA
Sbjct: 348  ARAASLAKAEAAKNIAPPNSAYQFEVSWRGLSGDRDLQTHLLKVTSPSMLPQIFKNALSA 407

Query: 724  PMLVDIIRCIATFFMEDMDLGVKYLENLTKVPRFDMIIMCLSPSDKADLHKIWNEAFSKG 545
            PML+DI+RC+ATF +EDMDL ++YLENLTKVPRFDMIIMCLS +DKA+L KIW+E F KG
Sbjct: 408  PMLMDIVRCVATFSIEDMDLAIRYLENLTKVPRFDMIIMCLSSTDKAELVKIWDEVFCKG 467

Query: 544  TPDYAEKLGNLRSRYGV 494
              +++  LG LR +YG+
Sbjct: 468  AEEHSATLGALRLKYGL 484


>ref|XP_009611910.1| PREDICTED: RNA polymerase II-associated protein 3 isoform X2
            [Nicotiana tomentosiformis]
          Length = 462

 Score =  491 bits (1264), Expect = e-136
 Identities = 278/477 (58%), Positives = 319/477 (66%), Gaps = 6/477 (1%)
 Frame = -1

Query: 1906 MAKVPSKHSRDQFQDFEGLLNNLQDWEXXXXXXXXXXXXXXXXXXXXXLPAQRHSMNSAS 1727
            MA+VPSKHSRDQFQ   GLLN LQDWE                         R   +  S
Sbjct: 1    MARVPSKHSRDQFQ---GLLNTLQDWELSLKDKDKKMKSQARGKEKL-----REDWSHTS 52

Query: 1726 QLSNGTGVNGKQPVGKTTASDNLGSGRQYDYLKDYDAISRLSGGFTAEES-VDANSEKEL 1550
            +L  G  V G Q VGK+T+  +      YDY K Y+  S LS    +EES +DANSEKEL
Sbjct: 53   ELPTGPQVTGTQRVGKSTSISSAAG--PYDYSKKYNPTSHLSSEMLSEESNIDANSEKEL 110

Query: 1549 GNEFFKQKKFNEAIDCYSRSIVFSPTAVAYANRAMAYIKVKRFQEAENDCTEALNLDDRY 1370
            GNEFFKQKKF EAI CYSRSI  SPTAVAYANRAMAY+K+KRFQEAENDCTEALNLDDRY
Sbjct: 111  GNEFFKQKKFKEAIICYSRSIALSPTAVAYANRAMAYLKIKRFQEAENDCTEALNLDDRY 170

Query: 1369 IKAYSRRSTARKELGKLKESFDDAAFALRLEPHNQEIKKQYAEVKSLLEKGILKKTSGAT 1190
            IKAYSRRSTARKELGKLKES +DA FA RLEP NQEIKKQY EVK+L EK ILK+ S AT
Sbjct: 171  IKAYSRRSTARKELGKLKESIEDAEFASRLEPQNQEIKKQYGEVKALYEKEILKRVSAAT 230

Query: 1189 QGSSQGVERAGKLKVDKSKPIHKVQSVSTSSPAGGVAEILKDNSENREVPAETSMEVESS 1010
              S+QG ++ G  K +K+ P+  +QSVS SS        +     NR+VP  T+MEVE +
Sbjct: 231  GVSAQGAQKTG--KTNKTGPV--IQSVSGSSQKVAEVRKIPAKENNRDVPG-TAMEVEDT 285

Query: 1009 SLRTHRSHVDTG-----LVTVKSKHKNGRQELKPSVQXXXXXXXXXXXXXXXXNIVPPNS 845
             ++ +    D       L   K  HKN +QELK SVQ                NI PPNS
Sbjct: 286  HMQINSKDSDASATVPTLNPAKRTHKNSKQELKESVQELAARAASLAKAEAAKNIAPPNS 345

Query: 844  AYQFEVSWRGLSGDRNLQARLLKVTPATALPGIFKNALSAPMLVDIIRCIATFFMEDMDL 665
            AYQFEVSWRGLSGDRNLQ  LLKVT    LP IFKNALSAPML+DI+RC+ATF +EDMDL
Sbjct: 346  AYQFEVSWRGLSGDRNLQTHLLKVTSPATLPQIFKNALSAPMLMDIVRCVATFSIEDMDL 405

Query: 664  GVKYLENLTKVPRFDMIIMCLSPSDKADLHKIWNEAFSKGTPDYAEKLGNLRSRYGV 494
             ++YLENLTKVPRFDMIIMCLS +DKA+L KIW+E F KG  ++   L  LR  YG+
Sbjct: 406  AIRYLENLTKVPRFDMIIMCLSSTDKAELVKIWDEVFCKGAEEHTATLSALRLNYGL 462


>ref|XP_009767326.1| PREDICTED: RNA polymerase II-associated protein 3 isoform X4
            [Nicotiana sylvestris]
          Length = 454

 Score =  483 bits (1242), Expect = e-133
 Identities = 275/477 (57%), Positives = 325/477 (68%), Gaps = 6/477 (1%)
 Frame = -1

Query: 1906 MAKVPSKHSRDQFQDFEGLLNNLQDWEXXXXXXXXXXXXXXXXXXXXXLPAQRHSMNSAS 1727
            MA+VP KH+RDQFQD+E    +L+D +                         R   +  S
Sbjct: 1    MARVPGKHTRDQFQDWE---LSLKDKDKKMKSQARGKEKL------------REDWSHTS 45

Query: 1726 QLSNGTGVNGKQPVGKTTASDNLGSGRQYDYLKDYDAISRLSGGFTAEES-VDANSEKEL 1550
            +L  G  VNG Q VGK+T     G+   YDY K Y+  S LS    +EES +DANSEKEL
Sbjct: 46   ELPTGPQVNGTQRVGKSTLIS--GAAGPYDYSKKYNPTSHLSSEMLSEESNIDANSEKEL 103

Query: 1549 GNEFFKQKKFNEAIDCYSRSIVFSPTAVAYANRAMAYIKVKRFQEAENDCTEALNLDDRY 1370
            GNEFFKQKKF EAIDCYSRSI  SPTAVAYANRAMAY+K+KRFQEAENDCTEALNLDDRY
Sbjct: 104  GNEFFKQKKFKEAIDCYSRSIALSPTAVAYANRAMAYLKLKRFQEAENDCTEALNLDDRY 163

Query: 1369 IKAYSRRSTARKELGKLKESFDDAAFALRLEPHNQEIKKQYAEVKSLLEKGILKKTSGAT 1190
            IKAYSRRSTARKELGKLKES +DA FA RLEP NQEIKKQY EVK+L EK ILK+ SGAT
Sbjct: 164  IKAYSRRSTARKELGKLKESIEDAEFASRLEPQNQEIKKQYGEVKALYEKEILKRVSGAT 223

Query: 1189 QGSSQGVERAGKLKVDKSKPIHKVQSVSTSSPAGGVAEILKDNSENREVPAETSMEVESS 1010
              S+QG +  G  K +K+ P+  +QSV +S     V +I    S +R+VP  T+MEVE +
Sbjct: 224  GVSAQGAQNTG--KTNKTGPV--IQSVGSSQKVAEVRKIPAKES-SRDVPG-TAMEVEDT 277

Query: 1009 SLRTHRSHVDTG-----LVTVKSKHKNGRQELKPSVQXXXXXXXXXXXXXXXXNIVPPNS 845
             ++ +    D       L   K  HKN +QELK SVQ                NI PPNS
Sbjct: 278  HMQINSKGSDASATVPTLNPAKRPHKNSKQELKESVQELAARAASLAKAEAAKNIAPPNS 337

Query: 844  AYQFEVSWRGLSGDRNLQARLLKVTPATALPGIFKNALSAPMLVDIIRCIATFFMEDMDL 665
            AYQFEVSWRGLSGDR+LQ  LLKVT  + LP IFKNALSAPML+DI+RC+ATF +EDMDL
Sbjct: 338  AYQFEVSWRGLSGDRDLQTHLLKVTSPSMLPQIFKNALSAPMLMDIVRCVATFSIEDMDL 397

Query: 664  GVKYLENLTKVPRFDMIIMCLSPSDKADLHKIWNEAFSKGTPDYAEKLGNLRSRYGV 494
             ++YLENLTKVPRFDMIIMCLS +DKA+L KIW+E F KG  +++  LG LR +YG+
Sbjct: 398  AIRYLENLTKVPRFDMIIMCLSSTDKAELVKIWDEVFCKGAEEHSATLGALRLKYGL 454


>ref|XP_009611912.1| PREDICTED: RNA polymerase II-associated protein 3 isoform X4
            [Nicotiana tomentosiformis]
          Length = 427

 Score =  481 bits (1238), Expect = e-133
 Identities = 274/472 (58%), Positives = 312/472 (66%), Gaps = 1/472 (0%)
 Frame = -1

Query: 1906 MAKVPSKHSRDQFQDFEGLLNNLQDWEXXXXXXXXXXXXXXXXXXXXXLPAQRHSMNSAS 1727
            MA+VPSKHSRDQFQD +GLLN LQDWE                         R   +  S
Sbjct: 1    MARVPSKHSRDQFQDMQGLLNTLQDWELSLKDKDKKMKSQARGKEKL-----REDWSHTS 55

Query: 1726 QLSNGTGVNGKQPVGKTTASDNLGSGRQYDYLKDYDAISRLSGGFTAEES-VDANSEKEL 1550
            +L  G  V G Q VGK+T+  +      YDY K Y+  S LS    +EES +DANSEKEL
Sbjct: 56   ELPTGPQVTGTQRVGKSTSISSAAG--PYDYSKKYNPTSHLSSEMLSEESNIDANSEKEL 113

Query: 1549 GNEFFKQKKFNEAIDCYSRSIVFSPTAVAYANRAMAYIKVKRFQEAENDCTEALNLDDRY 1370
            GNEFFKQKKF EAI CYSRSI  SPTAVAYANRAMAY+K+KRFQEAENDCTEALNLDDRY
Sbjct: 114  GNEFFKQKKFKEAIICYSRSIALSPTAVAYANRAMAYLKIKRFQEAENDCTEALNLDDRY 173

Query: 1369 IKAYSRRSTARKELGKLKESFDDAAFALRLEPHNQEIKKQYAEVKSLLEKGILKKTSGAT 1190
            IKAYSRRSTARKELGKLKES +DA FA RLEP NQEIKKQY EVK+L EK ILK+ S AT
Sbjct: 174  IKAYSRRSTARKELGKLKESIEDAEFASRLEPQNQEIKKQYGEVKALYEKEILKRVSAAT 233

Query: 1189 QGSSQGVERAGKLKVDKSKPIHKVQSVSTSSPAGGVAEILKDNSENREVPAETSMEVESS 1010
              S+QG ++ G  K +K+ P+  +QSVS SS    VAE+       R++PA         
Sbjct: 234  GVSAQGAQKTG--KTNKTGPV--IQSVSGSSQK--VAEV-------RKIPA--------- 271

Query: 1009 SLRTHRSHVDTGLVTVKSKHKNGRQELKPSVQXXXXXXXXXXXXXXXXNIVPPNSAYQFE 830
                            K  HKN +QELK SVQ                NI PPNSAYQFE
Sbjct: 272  ----------------KRTHKNSKQELKESVQELAARAASLAKAEAAKNIAPPNSAYQFE 315

Query: 829  VSWRGLSGDRNLQARLLKVTPATALPGIFKNALSAPMLVDIIRCIATFFMEDMDLGVKYL 650
            VSWRGLSGDRNLQ  LLKVT    LP IFKNALSAPML+DI+RC+ATF +EDMDL ++YL
Sbjct: 316  VSWRGLSGDRNLQTHLLKVTSPATLPQIFKNALSAPMLMDIVRCVATFSIEDMDLAIRYL 375

Query: 649  ENLTKVPRFDMIIMCLSPSDKADLHKIWNEAFSKGTPDYAEKLGNLRSRYGV 494
            ENLTKVPRFDMIIMCLS +DKA+L KIW+E F KG  ++   L  LR  YG+
Sbjct: 376  ENLTKVPRFDMIIMCLSSTDKAELVKIWDEVFCKGAEEHTATLSALRLNYGL 427


>ref|XP_009611911.1| PREDICTED: RNA polymerase II-associated protein 3 isoform X3
            [Nicotiana tomentosiformis]
          Length = 455

 Score =  479 bits (1233), Expect = e-132
 Identities = 273/477 (57%), Positives = 318/477 (66%), Gaps = 6/477 (1%)
 Frame = -1

Query: 1906 MAKVPSKHSRDQFQDFEGLLNNLQDWEXXXXXXXXXXXXXXXXXXXXXLPAQRHSMNSAS 1727
            MA+VPSKHSRDQFQD+E    +L+D +                         R   +  S
Sbjct: 1    MARVPSKHSRDQFQDWE---LSLKDKDKKMKSQARGKEKL------------REDWSHTS 45

Query: 1726 QLSNGTGVNGKQPVGKTTASDNLGSGRQYDYLKDYDAISRLSGGFTAEES-VDANSEKEL 1550
            +L  G  V G Q VGK+T+  +      YDY K Y+  S LS    +EES +DANSEKEL
Sbjct: 46   ELPTGPQVTGTQRVGKSTSISSAAG--PYDYSKKYNPTSHLSSEMLSEESNIDANSEKEL 103

Query: 1549 GNEFFKQKKFNEAIDCYSRSIVFSPTAVAYANRAMAYIKVKRFQEAENDCTEALNLDDRY 1370
            GNEFFKQKKF EAI CYSRSI  SPTAVAYANRAMAY+K+KRFQEAENDCTEALNLDDRY
Sbjct: 104  GNEFFKQKKFKEAIICYSRSIALSPTAVAYANRAMAYLKIKRFQEAENDCTEALNLDDRY 163

Query: 1369 IKAYSRRSTARKELGKLKESFDDAAFALRLEPHNQEIKKQYAEVKSLLEKGILKKTSGAT 1190
            IKAYSRRSTARKELGKLKES +DA FA RLEP NQEIKKQY EVK+L EK ILK+ S AT
Sbjct: 164  IKAYSRRSTARKELGKLKESIEDAEFASRLEPQNQEIKKQYGEVKALYEKEILKRVSAAT 223

Query: 1189 QGSSQGVERAGKLKVDKSKPIHKVQSVSTSSPAGGVAEILKDNSENREVPAETSMEVESS 1010
              S+QG ++ G  K +K+ P+  +QSVS SS        +     NR+VP  T+MEVE +
Sbjct: 224  GVSAQGAQKTG--KTNKTGPV--IQSVSGSSQKVAEVRKIPAKENNRDVPG-TAMEVEDT 278

Query: 1009 SLRTHRSHVDTG-----LVTVKSKHKNGRQELKPSVQXXXXXXXXXXXXXXXXNIVPPNS 845
             ++ +    D       L   K  HKN +QELK SVQ                NI PPNS
Sbjct: 279  HMQINSKDSDASATVPTLNPAKRTHKNSKQELKESVQELAARAASLAKAEAAKNIAPPNS 338

Query: 844  AYQFEVSWRGLSGDRNLQARLLKVTPATALPGIFKNALSAPMLVDIIRCIATFFMEDMDL 665
            AYQFEVSWRGLSGDRNLQ  LLKVT    LP IFKNALSAPML+DI+RC+ATF +EDMDL
Sbjct: 339  AYQFEVSWRGLSGDRNLQTHLLKVTSPATLPQIFKNALSAPMLMDIVRCVATFSIEDMDL 398

Query: 664  GVKYLENLTKVPRFDMIIMCLSPSDKADLHKIWNEAFSKGTPDYAEKLGNLRSRYGV 494
             ++YLENLTKVPRFDMIIMCLS +DKA+L KIW+E F KG  ++   L  LR  YG+
Sbjct: 399  AIRYLENLTKVPRFDMIIMCLSSTDKAELVKIWDEVFCKGAEEHTATLSALRLNYGL 455


>ref|XP_009767331.1| PREDICTED: RNA polymerase II-associated protein 3 isoform X5
            [Nicotiana sylvestris]
          Length = 449

 Score =  479 bits (1232), Expect = e-132
 Identities = 270/461 (58%), Positives = 315/461 (68%), Gaps = 6/461 (1%)
 Frame = -1

Query: 1858 EGLLNNLQDWEXXXXXXXXXXXXXXXXXXXXXLPAQRHSMNSASQLSNGTGVNGKQPVGK 1679
            +GLLNNLQDWE                         R   +  S+L  G  VNG Q VGK
Sbjct: 2    QGLLNNLQDWELSLKDKDKKMKSQARGKEKL-----REDWSHTSELPTGPQVNGTQRVGK 56

Query: 1678 TTASDNLGSGRQYDYLKDYDAISRLSGGFTAEES-VDANSEKELGNEFFKQKKFNEAIDC 1502
            +T     G+   YDY K Y+  S LS    +EES +DANSEKELGNEFFKQKKF EAIDC
Sbjct: 57   STLIS--GAAGPYDYSKKYNPTSHLSSEMLSEESNIDANSEKELGNEFFKQKKFKEAIDC 114

Query: 1501 YSRSIVFSPTAVAYANRAMAYIKVKRFQEAENDCTEALNLDDRYIKAYSRRSTARKELGK 1322
            YSRSI  SPTAVAYANRAMAY+K+KRFQEAENDCTEALNLDDRYIKAYSRRSTARKELGK
Sbjct: 115  YSRSIALSPTAVAYANRAMAYLKLKRFQEAENDCTEALNLDDRYIKAYSRRSTARKELGK 174

Query: 1321 LKESFDDAAFALRLEPHNQEIKKQYAEVKSLLEKGILKKTSGATQGSSQGVERAGKLKVD 1142
            LKES +DA FA RLEP NQEIKKQY EVK+L EK ILK+ SGAT  S+QG +  G  K +
Sbjct: 175  LKESIEDAEFASRLEPQNQEIKKQYGEVKALYEKEILKRVSGATGVSAQGAQNTG--KTN 232

Query: 1141 KSKPIHKVQSVSTSSPAGGVAEILKDNSENREVPAETSMEVESSSLRTHRSHVDTG---- 974
            K+ P+  +QSV +S     V +I    S +R+VP  T+MEVE + ++ +    D      
Sbjct: 233  KTGPV--IQSVGSSQKVAEVRKIPAKES-SRDVPG-TAMEVEDTHMQINSKGSDASATVP 288

Query: 973  -LVTVKSKHKNGRQELKPSVQXXXXXXXXXXXXXXXXNIVPPNSAYQFEVSWRGLSGDRN 797
             L   K  HKN +QELK SVQ                NI PPNSAYQFEVSWRGLSGDR+
Sbjct: 289  TLNPAKRPHKNSKQELKESVQELAARAASLAKAEAAKNIAPPNSAYQFEVSWRGLSGDRD 348

Query: 796  LQARLLKVTPATALPGIFKNALSAPMLVDIIRCIATFFMEDMDLGVKYLENLTKVPRFDM 617
            LQ  LLKVT  + LP IFKNALSAPML+DI+RC+ATF +EDMDL ++YLENLTKVPRFDM
Sbjct: 349  LQTHLLKVTSPSMLPQIFKNALSAPMLMDIVRCVATFSIEDMDLAIRYLENLTKVPRFDM 408

Query: 616  IIMCLSPSDKADLHKIWNEAFSKGTPDYAEKLGNLRSRYGV 494
            IIMCLS +DKA+L KIW+E F KG  +++  LG LR +YG+
Sbjct: 409  IIMCLSSTDKAELVKIWDEVFCKGAEEHSATLGALRLKYGL 449


>ref|XP_006339932.1| PREDICTED: RNA polymerase II-associated protein 3-like isoform X1
            [Solanum tuberosum]
          Length = 468

 Score =  478 bits (1231), Expect = e-132
 Identities = 270/480 (56%), Positives = 321/480 (66%), Gaps = 8/480 (1%)
 Frame = -1

Query: 1906 MAKVPSKHSRDQFQDFEGLLNNLQDWEXXXXXXXXXXXXXXXXXXXXXLPAQRHSMNSAS 1727
            MAKVPSKHSRDQFQD +GLLNNLQDWE                         R   +  S
Sbjct: 1    MAKVPSKHSRDQFQDMQGLLNNLQDWELSLKGKDKKMKSQAHGKETL-----REDWSRTS 55

Query: 1726 QLSNGTGVNGKQPVGKTTASDNLGSGRQYDYLKDYDAISRLSGGFTAEES-VDANSEKEL 1550
            +L     VNG + VGK+T+  +      Y+Y K+Y+ IS LS    +EES ++ANSEKEL
Sbjct: 56   ELLTSPQVNGTR-VGKSTSIRSAAG--PYNYSKNYNPISHLSSELISEESNINANSEKEL 112

Query: 1549 GNEFFKQKKFNEAIDCYSRSIVFSPTAVAYANRAMAYIKVKRFQEAENDCTEALNLDDRY 1370
            GNE FKQKKFNEAIDCYSRSI  SPTAV+YANRAMAY+K+KRFQEAENDCTEALNLDDRY
Sbjct: 113  GNECFKQKKFNEAIDCYSRSIALSPTAVSYANRAMAYLKIKRFQEAENDCTEALNLDDRY 172

Query: 1369 IKAYSRRSTARKELGKLKESFDDAAFALRLEPHNQEIKKQYAEVKSLLEKGILKKTSGAT 1190
            IKAYSRRST+RKELGKLKES +DA FALRLEP N EIKKQY EVK+L EK I K+ SGAT
Sbjct: 173  IKAYSRRSTSRKELGKLKESIEDAEFALRLEPQNPEIKKQYGEVKALYEKEIRKRVSGAT 232

Query: 1189 QGSSQGVERAGKLKVDKSKPIHKVQSVSTSSPAGGVAEILKDNSENREVPAETSMEVESS 1010
              S+Q  +++G  K  KS P+  +QSVS+SS        +     NR+VP    +E    
Sbjct: 233  DVSAQRAQKSG--KTIKSGPV--IQSVSSSSQKMAEVWTIPAKENNRDVPGTAKVEDTHM 288

Query: 1009 SLRTHRSH-------VDTGLVTVKSKHKNGRQELKPSVQXXXXXXXXXXXXXXXXNIVPP 851
             +    S        ++    T K  HK  +QEL+ SVQ                NI  P
Sbjct: 289  QINNKDSDASPTVPTLNPAFGTAKKTHKISKQELEESVQELAARAAGLAKTEAAKNIAAP 348

Query: 850  NSAYQFEVSWRGLSGDRNLQARLLKVTPATALPGIFKNALSAPMLVDIIRCIATFFMEDM 671
            NSAYQFEVSWRGLSGDRNLQ +LLKVT    LP IFKNALSAPML+DI+RC+ATFF+EDM
Sbjct: 349  NSAYQFEVSWRGLSGDRNLQTQLLKVTSPAMLPRIFKNALSAPMLMDIVRCVATFFIEDM 408

Query: 670  DLGVKYLENLTKVPRFDMIIMCLSPSDKADLHKIWNEAFSKGTPDYAEKLGNLRSRYGVK 491
            +L ++YLE+LTKVPRFDMIIMCLS +DK++L KIW E F K   +++  LG LR  YG+K
Sbjct: 409  NLAIRYLEDLTKVPRFDMIIMCLSSTDKSELLKIWEEIFCKEAEEHSATLGALRVPYGLK 468


>ref|XP_009767339.1| PREDICTED: RNA polymerase II-associated protein 3 isoform X6
            [Nicotiana sylvestris]
          Length = 446

 Score =  476 bits (1225), Expect = e-131
 Identities = 275/492 (55%), Positives = 317/492 (64%), Gaps = 21/492 (4%)
 Frame = -1

Query: 1906 MAKVPSKHSRDQFQ--------------------DFEGLLNNLQDWEXXXXXXXXXXXXX 1787
            MA+VP KH+RDQFQ                    D +GLLNNLQDWE             
Sbjct: 1    MARVPGKHTRDQFQGFICSILSGLWFYWHYLADQDMQGLLNNLQDWELSLKDKDKKMKSQ 60

Query: 1786 XXXXXXXXLPAQRHSMNSASQLSNGTGVNGKQPVGKTTASDNLGSGRQYDYLKDYDAISR 1607
                        R   +  S+L  G  VNG Q VGK+T     G+   YDY K Y+  S 
Sbjct: 61   ARGKEKL-----REDWSHTSELPTGPQVNGTQRVGKSTLIS--GAAGPYDYSKKYNPTSH 113

Query: 1606 LSGGFTAEES-VDANSEKELGNEFFKQKKFNEAIDCYSRSIVFSPTAVAYANRAMAYIKV 1430
            LS    +EES +DANSEKELGNEFFKQKKF EAIDCYSRSI  SPTAVAYANRAMAY+K+
Sbjct: 114  LSSEMLSEESNIDANSEKELGNEFFKQKKFKEAIDCYSRSIALSPTAVAYANRAMAYLKL 173

Query: 1429 KRFQEAENDCTEALNLDDRYIKAYSRRSTARKELGKLKESFDDAAFALRLEPHNQEIKKQ 1250
            KRFQEAENDCTEALNLDDRYIKAYSRRSTARKELGKLKES +DA FA RLEP NQEIKKQ
Sbjct: 174  KRFQEAENDCTEALNLDDRYIKAYSRRSTARKELGKLKESIEDAEFASRLEPQNQEIKKQ 233

Query: 1249 YAEVKSLLEKGILKKTSGATQGSSQGVERAGKLKVDKSKPIHKVQSVSTSSPAGGVAEIL 1070
            Y EVK+L EK ILK+ SGAT  S+QG +  G  K +K+ P+  +QSV +S     VAE+ 
Sbjct: 234  YGEVKALYEKEILKRVSGATGVSAQGAQNTG--KTNKTGPV--IQSVGSSQK---VAEV- 285

Query: 1069 KDNSENREVPAETSMEVESSSLRTHRSHVDTGLVTVKSKHKNGRQELKPSVQXXXXXXXX 890
                  R++PA                         K  HKN +QELK SVQ        
Sbjct: 286  ------RKIPA-------------------------KRPHKNSKQELKESVQELAARAAS 314

Query: 889  XXXXXXXXNIVPPNSAYQFEVSWRGLSGDRNLQARLLKVTPATALPGIFKNALSAPMLVD 710
                    NI PPNSAYQFEVSWRGLSGDR+LQ  LLKVT  + LP IFKNALSAPML+D
Sbjct: 315  LAKAEAAKNIAPPNSAYQFEVSWRGLSGDRDLQTHLLKVTSPSMLPQIFKNALSAPMLMD 374

Query: 709  IIRCIATFFMEDMDLGVKYLENLTKVPRFDMIIMCLSPSDKADLHKIWNEAFSKGTPDYA 530
            I+RC+ATF +EDMDL ++YLENLTKVPRFDMIIMCLS +DKA+L KIW+E F KG  +++
Sbjct: 375  IVRCVATFSIEDMDLAIRYLENLTKVPRFDMIIMCLSSTDKAELVKIWDEVFCKGAEEHS 434

Query: 529  EKLGNLRSRYGV 494
              LG LR +YG+
Sbjct: 435  ATLGALRLKYGL 446


>ref|XP_004248819.1| PREDICTED: RNA polymerase II-associated protein 3 isoform X1 [Solanum
            lycopersicum]
          Length = 470

 Score =  476 bits (1224), Expect = e-131
 Identities = 270/481 (56%), Positives = 317/481 (65%), Gaps = 8/481 (1%)
 Frame = -1

Query: 1906 MAKVPSKHSRDQFQDFEGLLNNLQDWEXXXXXXXXXXXXXXXXXXXXXLPAQRHSMNSAS 1727
            MA+VPS HSRDQFQD +GL NNLQDWE                         R S    S
Sbjct: 1    MARVPSNHSRDQFQDMQGLFNNLQDWELALKGKDKKMKSQAGGKETLKEDWSRTSEPLTS 60

Query: 1726 QLSNGTGVNGKQPVGKTTASDNLGSGRQYDYLKDYDAISRLSGGFTAEES-VDANSEKEL 1550
              +NGT     Q VGK+T+  N      Y Y K+Y+ IS LS    +EES ++ANSEKEL
Sbjct: 61   PQANGT-----QQVGKSTSIRNAAG--PYSYSKNYNPISHLSSELISEESNINANSEKEL 113

Query: 1549 GNEFFKQKKFNEAIDCYSRSIVFSPTAVAYANRAMAYIKVKRFQEAENDCTEALNLDDRY 1370
            GNE FKQKKFNEAIDCYSRSI  SPTAV+YANRAMAY+K+KRFQEAENDCTEALNLDDRY
Sbjct: 114  GNECFKQKKFNEAIDCYSRSIALSPTAVSYANRAMAYLKIKRFQEAENDCTEALNLDDRY 173

Query: 1369 IKAYSRRSTARKELGKLKESFDDAAFALRLEPHNQEIKKQYAEVKSLLEKGILKKTSGAT 1190
            IKAYSRRST+RKELGKLKES +DA FAL LEP N EIKKQY EVK+L EK ILK+ SGAT
Sbjct: 174  IKAYSRRSTSRKELGKLKESIEDAEFALWLEPRNPEIKKQYGEVKALYEKEILKRVSGAT 233

Query: 1189 QGSSQGVERAGKLKVDKSKPIHKVQSVSTSSPAGGVAEILKDNSENREVPAETSMEVESS 1010
              S+QG +++G  K  K  P+  +QSVS+SS        +     NR+V     +E    
Sbjct: 234  DVSAQGPQKSG--KTIKIGPV--IQSVSSSSQKVAEVRTIPAKENNRDVLGTAKVEDTHM 289

Query: 1009 SLRTHRSH-------VDTGLVTVKSKHKNGRQELKPSVQXXXXXXXXXXXXXXXXNIVPP 851
             +    S        ++    T K  HK  +QEL+ SVQ                NI  P
Sbjct: 290  QISNKDSDASPTVPTLNLAFGTAKKTHKISKQELEESVQELAARAAGLAKTEAAKNIAAP 349

Query: 850  NSAYQFEVSWRGLSGDRNLQARLLKVTPATALPGIFKNALSAPMLVDIIRCIATFFMEDM 671
            NSAYQFEVSWRGLSGDRNLQ +LLKVT    LP IFKNALSAPML+DI+RCIATFF+EDM
Sbjct: 350  NSAYQFEVSWRGLSGDRNLQTQLLKVTSPAMLPRIFKNALSAPMLMDIVRCIATFFIEDM 409

Query: 670  DLGVKYLENLTKVPRFDMIIMCLSPSDKADLHKIWNEAFSKGTPDYAEKLGNLRSRYGVK 491
            +L ++YLE+LTKVPRFDMIIMCLS +DK++L KIW E F K   +++  LG LR  YG+K
Sbjct: 410  NLAIRYLEDLTKVPRFDMIIMCLSSADKSELLKIWEEIFCKVAEEHSATLGALRVSYGLK 469

Query: 490  Q 488
            Q
Sbjct: 470  Q 470


>ref|XP_006339933.1| PREDICTED: RNA polymerase II-associated protein 3-like isoform X2
            [Solanum tuberosum]
          Length = 467

 Score =  474 bits (1221), Expect = e-131
 Identities = 270/480 (56%), Positives = 321/480 (66%), Gaps = 8/480 (1%)
 Frame = -1

Query: 1906 MAKVPSKHSRDQFQDFEGLLNNLQDWEXXXXXXXXXXXXXXXXXXXXXLPAQRHSMNSAS 1727
            MAKVPSKHSRDQFQD +GLLNNLQDWE                         R   +  S
Sbjct: 1    MAKVPSKHSRDQFQDMQGLLNNLQDWELSLKGKDKKMKSQAHGKETL-----REDWSRTS 55

Query: 1726 QLSNGTGVNGKQPVGKTTASDNLGSGRQYDYLKDYDAISRLSGGFTAEES-VDANSEKEL 1550
            +L     VNG + VGK+T+  +      Y+Y K+Y+ IS LS    +EES ++ANSEKEL
Sbjct: 56   ELLTSPQVNGTR-VGKSTSIRSAAG--PYNYSKNYNPISHLSSELISEESNINANSEKEL 112

Query: 1549 GNEFFKQKKFNEAIDCYSRSIVFSPTAVAYANRAMAYIKVKRFQEAENDCTEALNLDDRY 1370
            GNE FKQKKFNEAIDCYSRSI  SPTAV+YANRAMAY+K+KRFQEAENDCTEALNLDDRY
Sbjct: 113  GNECFKQKKFNEAIDCYSRSIALSPTAVSYANRAMAYLKIKRFQEAENDCTEALNLDDRY 172

Query: 1369 IKAYSRRSTARKELGKLKESFDDAAFALRLEPHNQEIKKQYAEVKSLLEKGILKKTSGAT 1190
            IKAYSRRST+RKELGKLKES +DA FALRLEP N EIKKQY EVK+L EK I K+ SGAT
Sbjct: 173  IKAYSRRSTSRKELGKLKESIEDAEFALRLEPQNPEIKKQYGEVKALYEK-IRKRVSGAT 231

Query: 1189 QGSSQGVERAGKLKVDKSKPIHKVQSVSTSSPAGGVAEILKDNSENREVPAETSMEVESS 1010
              S+Q  +++G  K  KS P+  +QSVS+SS        +     NR+VP    +E    
Sbjct: 232  DVSAQRAQKSG--KTIKSGPV--IQSVSSSSQKMAEVWTIPAKENNRDVPGTAKVEDTHM 287

Query: 1009 SLRTHRSH-------VDTGLVTVKSKHKNGRQELKPSVQXXXXXXXXXXXXXXXXNIVPP 851
             +    S        ++    T K  HK  +QEL+ SVQ                NI  P
Sbjct: 288  QINNKDSDASPTVPTLNPAFGTAKKTHKISKQELEESVQELAARAAGLAKTEAAKNIAAP 347

Query: 850  NSAYQFEVSWRGLSGDRNLQARLLKVTPATALPGIFKNALSAPMLVDIIRCIATFFMEDM 671
            NSAYQFEVSWRGLSGDRNLQ +LLKVT    LP IFKNALSAPML+DI+RC+ATFF+EDM
Sbjct: 348  NSAYQFEVSWRGLSGDRNLQTQLLKVTSPAMLPRIFKNALSAPMLMDIVRCVATFFIEDM 407

Query: 670  DLGVKYLENLTKVPRFDMIIMCLSPSDKADLHKIWNEAFSKGTPDYAEKLGNLRSRYGVK 491
            +L ++YLE+LTKVPRFDMIIMCLS +DK++L KIW E F K   +++  LG LR  YG+K
Sbjct: 408  NLAIRYLEDLTKVPRFDMIIMCLSSTDKSELLKIWEEIFCKEAEEHSATLGALRVPYGLK 467


>ref|XP_010327507.1| PREDICTED: RNA polymerase II-associated protein 3 isoform X2 [Solanum
            lycopersicum]
          Length = 469

 Score =  472 bits (1214), Expect = e-130
 Identities = 270/481 (56%), Positives = 317/481 (65%), Gaps = 8/481 (1%)
 Frame = -1

Query: 1906 MAKVPSKHSRDQFQDFEGLLNNLQDWEXXXXXXXXXXXXXXXXXXXXXLPAQRHSMNSAS 1727
            MA+VPS HSRDQFQD +GL NNLQDWE                         R S    S
Sbjct: 1    MARVPSNHSRDQFQDMQGLFNNLQDWELALKGKDKKMKSQAGGKETLKEDWSRTSEPLTS 60

Query: 1726 QLSNGTGVNGKQPVGKTTASDNLGSGRQYDYLKDYDAISRLSGGFTAEES-VDANSEKEL 1550
              +NGT     Q VGK+T+  N      Y Y K+Y+ IS LS    +EES ++ANSEKEL
Sbjct: 61   PQANGT-----QQVGKSTSIRNAAG--PYSYSKNYNPISHLSSELISEESNINANSEKEL 113

Query: 1549 GNEFFKQKKFNEAIDCYSRSIVFSPTAVAYANRAMAYIKVKRFQEAENDCTEALNLDDRY 1370
            GNE FKQKKFNEAIDCYSRSI  SPTAV+YANRAMAY+K+KRFQEAENDCTEALNLDDRY
Sbjct: 114  GNECFKQKKFNEAIDCYSRSIALSPTAVSYANRAMAYLKIKRFQEAENDCTEALNLDDRY 173

Query: 1369 IKAYSRRSTARKELGKLKESFDDAAFALRLEPHNQEIKKQYAEVKSLLEKGILKKTSGAT 1190
            IKAYSRRST+RKELGKLKES +DA FAL LEP N EIKKQY EVK+L EK ILK+ SGAT
Sbjct: 174  IKAYSRRSTSRKELGKLKESIEDAEFALWLEPRNPEIKKQYGEVKALYEK-ILKRVSGAT 232

Query: 1189 QGSSQGVERAGKLKVDKSKPIHKVQSVSTSSPAGGVAEILKDNSENREVPAETSMEVESS 1010
              S+QG +++G  K  K  P+  +QSVS+SS        +     NR+V     +E    
Sbjct: 233  DVSAQGPQKSG--KTIKIGPV--IQSVSSSSQKVAEVRTIPAKENNRDVLGTAKVEDTHM 288

Query: 1009 SLRTHRSH-------VDTGLVTVKSKHKNGRQELKPSVQXXXXXXXXXXXXXXXXNIVPP 851
             +    S        ++    T K  HK  +QEL+ SVQ                NI  P
Sbjct: 289  QISNKDSDASPTVPTLNLAFGTAKKTHKISKQELEESVQELAARAAGLAKTEAAKNIAAP 348

Query: 850  NSAYQFEVSWRGLSGDRNLQARLLKVTPATALPGIFKNALSAPMLVDIIRCIATFFMEDM 671
            NSAYQFEVSWRGLSGDRNLQ +LLKVT    LP IFKNALSAPML+DI+RCIATFF+EDM
Sbjct: 349  NSAYQFEVSWRGLSGDRNLQTQLLKVTSPAMLPRIFKNALSAPMLMDIVRCIATFFIEDM 408

Query: 670  DLGVKYLENLTKVPRFDMIIMCLSPSDKADLHKIWNEAFSKGTPDYAEKLGNLRSRYGVK 491
            +L ++YLE+LTKVPRFDMIIMCLS +DK++L KIW E F K   +++  LG LR  YG+K
Sbjct: 409  NLAIRYLEDLTKVPRFDMIIMCLSSADKSELLKIWEEIFCKVAEEHSATLGALRVSYGLK 468

Query: 490  Q 488
            Q
Sbjct: 469  Q 469