BLASTX nr result
ID: Forsythia21_contig00016781
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Forsythia21_contig00016781
(421 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_011097709.1| PREDICTED: probable RNA polymerase II transc... 217 3e-54
ref|XP_011097708.1| PREDICTED: probable RNA polymerase II transc... 217 3e-54
ref|XP_010327201.1| PREDICTED: probable RNA polymerase II transc... 204 2e-50
ref|XP_009758565.1| PREDICTED: probable RNA polymerase II transc... 201 1e-49
ref|XP_004248296.1| PREDICTED: probable RNA polymerase II transc... 201 2e-49
ref|XP_009602018.1| PREDICTED: probable RNA polymerase II transc... 200 4e-49
ref|XP_006352543.1| PREDICTED: probable RNA polymerase II transc... 200 4e-49
emb|CDP20682.1| unnamed protein product [Coffea canephora] 199 6e-49
ref|XP_011097710.1| PREDICTED: probable RNA polymerase II transc... 198 1e-48
gb|EPS73151.1| hypothetical protein M569_01605, partial [Genlise... 197 2e-48
ref|XP_012841835.1| PREDICTED: probable RNA polymerase II transc... 194 1e-47
ref|XP_010644655.1| PREDICTED: probable RNA polymerase II transc... 176 7e-42
ref|XP_002276057.1| PREDICTED: probable RNA polymerase II transc... 176 7e-42
emb|CAN79528.1| hypothetical protein VITISV_026261 [Vitis vinifera] 176 7e-42
gb|KCW51965.1| hypothetical protein EUGRSUZ_J01409 [Eucalyptus g... 166 7e-39
ref|XP_010032566.1| PREDICTED: probable RNA polymerase II transc... 166 7e-39
gb|KCW51963.1| hypothetical protein EUGRSUZ_J01409 [Eucalyptus g... 166 7e-39
ref|XP_008457279.1| PREDICTED: probable RNA polymerase II transc... 163 5e-38
ref|XP_008457278.1| PREDICTED: probable RNA polymerase II transc... 163 5e-38
ref|XP_010246174.1| PREDICTED: LOW QUALITY PROTEIN: probable RNA... 162 6e-38
>ref|XP_011097709.1| PREDICTED: probable RNA polymerase II transcription factor B
subunit 1-1 isoform X2 [Sesamum indicum]
Length = 592
Score = 217 bits (552), Expect = 3e-54
Identities = 107/137 (78%), Positives = 118/137 (86%)
Frame = -3
Query: 413 MADGQVMKRAKYKSSVKDPGVPGVIKMTRERLVFMPNDPNSSRKLNVEFRMIKGHKFTKE 234
MAD QV+KRAKYKSSVKDPGV GV+KM+ ER VFMPNDP S+ KLNVEFRMIKGHKFTKE
Sbjct: 1 MADKQVIKRAKYKSSVKDPGVAGVLKMSIERFVFMPNDPKSTTKLNVEFRMIKGHKFTKE 60
Query: 233 GSSKQALLNLTQDQGGNYIFEFDSFADRDICREFVAAAIAFHGETGKATSEKPAAPLQDE 54
GSSKQALLNLTQDQGGNYIFEFDSFADRD+CREFVA AIAFH E G+ +K A P+ +E
Sbjct: 61 GSSKQALLNLTQDQGGNYIFEFDSFADRDVCREFVANAIAFHAEAGRVVPDKSAPPVNNE 120
Query: 53 QLSTAEMDHRIKLLQED 3
QLS E + RIKLLQE+
Sbjct: 121 QLSREETERRIKLLQEN 137
>ref|XP_011097708.1| PREDICTED: probable RNA polymerase II transcription factor B
subunit 1-1 isoform X1 [Sesamum indicum]
Length = 600
Score = 217 bits (552), Expect = 3e-54
Identities = 107/137 (78%), Positives = 118/137 (86%)
Frame = -3
Query: 413 MADGQVMKRAKYKSSVKDPGVPGVIKMTRERLVFMPNDPNSSRKLNVEFRMIKGHKFTKE 234
MAD QV+KRAKYKSSVKDPGV GV+KM+ ER VFMPNDP S+ KLNVEFRMIKGHKFTKE
Sbjct: 1 MADKQVIKRAKYKSSVKDPGVAGVLKMSIERFVFMPNDPKSTTKLNVEFRMIKGHKFTKE 60
Query: 233 GSSKQALLNLTQDQGGNYIFEFDSFADRDICREFVAAAIAFHGETGKATSEKPAAPLQDE 54
GSSKQALLNLTQDQGGNYIFEFDSFADRD+CREFVA AIAFH E G+ +K A P+ +E
Sbjct: 61 GSSKQALLNLTQDQGGNYIFEFDSFADRDVCREFVANAIAFHAEAGRVVPDKSAPPVNNE 120
Query: 53 QLSTAEMDHRIKLLQED 3
QLS E + RIKLLQE+
Sbjct: 121 QLSREETERRIKLLQEN 137
>ref|XP_010327201.1| PREDICTED: probable RNA polymerase II transcription factor B
subunit 1-1 isoform X1 [Solanum lycopersicum]
Length = 608
Score = 204 bits (519), Expect = 2e-50
Identities = 104/139 (74%), Positives = 118/139 (84%)
Frame = -3
Query: 419 SSMADGQVMKRAKYKSSVKDPGVPGVIKMTRERLVFMPNDPNSSRKLNVEFRMIKGHKFT 240
SSMADG+V+KRAKYK+SVK PGVPGV+K+T+ER FMPNDP + KLNVEF++IKGHK +
Sbjct: 8 SSMADGKVVKRAKYKTSVKVPGVPGVLKLTKERFYFMPNDPTLTTKLNVEFKLIKGHKSS 67
Query: 239 KEGSSKQALLNLTQDQGGNYIFEFDSFADRDICREFVAAAIAFHGETGKATSEKPAAPLQ 60
KE SSKQALLNLTQ QGGNY+FEFDSF DRD CR+FVA+AIA GE GKATSEKPA P
Sbjct: 68 KECSSKQALLNLTQAQGGNYLFEFDSFPDRDQCRDFVASAIAACGEIGKATSEKPAVP-H 126
Query: 59 DEQLSTAEMDHRIKLLQED 3
DEQLS EM RIKLLQE+
Sbjct: 127 DEQLSATEMGRRIKLLQEN 145
>ref|XP_009758565.1| PREDICTED: probable RNA polymerase II transcription factor B
subunit 1-1 isoform X1 [Nicotiana sylvestris]
Length = 599
Score = 201 bits (512), Expect = 1e-49
Identities = 102/137 (74%), Positives = 116/137 (84%)
Frame = -3
Query: 413 MADGQVMKRAKYKSSVKDPGVPGVIKMTRERLVFMPNDPNSSRKLNVEFRMIKGHKFTKE 234
MADG+V+KRAKYKSSVKDPGVPGV+K+T+ER FMPNDP S+ KLNVEF++IKGH+ +KE
Sbjct: 1 MADGKVVKRAKYKSSVKDPGVPGVLKLTKERFFFMPNDPTSTTKLNVEFKLIKGHRSSKE 60
Query: 233 GSSKQALLNLTQDQGGNYIFEFDSFADRDICREFVAAAIAFHGETGKATSEKPAAPLQDE 54
GSSKQALLNL DQG +YIFEFDSF DRD CREFVA+AIA GE KA SEKPA P DE
Sbjct: 61 GSSKQALLNLMHDQGRSYIFEFDSFPDRDKCREFVASAIAACGEVVKAASEKPAVP-HDE 119
Query: 53 QLSTAEMDHRIKLLQED 3
QLS AEM RIKLLQ++
Sbjct: 120 QLSAAEMGRRIKLLQDN 136
>ref|XP_004248296.1| PREDICTED: probable RNA polymerase II transcription factor B
subunit 1-1 isoform X2 [Solanum lycopersicum]
Length = 599
Score = 201 bits (511), Expect = 2e-49
Identities = 102/137 (74%), Positives = 116/137 (84%)
Frame = -3
Query: 413 MADGQVMKRAKYKSSVKDPGVPGVIKMTRERLVFMPNDPNSSRKLNVEFRMIKGHKFTKE 234
MADG+V+KRAKYK+SVK PGVPGV+K+T+ER FMPNDP + KLNVEF++IKGHK +KE
Sbjct: 1 MADGKVVKRAKYKTSVKVPGVPGVLKLTKERFYFMPNDPTLTTKLNVEFKLIKGHKSSKE 60
Query: 233 GSSKQALLNLTQDQGGNYIFEFDSFADRDICREFVAAAIAFHGETGKATSEKPAAPLQDE 54
SSKQALLNLTQ QGGNY+FEFDSF DRD CR+FVA+AIA GE GKATSEKPA P DE
Sbjct: 61 CSSKQALLNLTQAQGGNYLFEFDSFPDRDQCRDFVASAIAACGEIGKATSEKPAVP-HDE 119
Query: 53 QLSTAEMDHRIKLLQED 3
QLS EM RIKLLQE+
Sbjct: 120 QLSATEMGRRIKLLQEN 136
>ref|XP_009602018.1| PREDICTED: probable RNA polymerase II transcription factor B
subunit 1-1 [Nicotiana tomentosiformis]
Length = 599
Score = 200 bits (508), Expect = 4e-49
Identities = 102/137 (74%), Positives = 114/137 (83%)
Frame = -3
Query: 413 MADGQVMKRAKYKSSVKDPGVPGVIKMTRERLVFMPNDPNSSRKLNVEFRMIKGHKFTKE 234
MADG+V+KR KYKSSVKDPGV GV+K+T+ER FMPNDP S+ KLNVEF++IKGH+ +KE
Sbjct: 1 MADGKVVKRVKYKSSVKDPGVSGVLKLTKERFFFMPNDPTSTTKLNVEFKLIKGHRSSKE 60
Query: 233 GSSKQALLNLTQDQGGNYIFEFDSFADRDICREFVAAAIAFHGETGKATSEKPAAPLQDE 54
GSSKQALLNL DQG NYIFEFDSF DRD CREFVA+AIA GE KA SEKPA P DE
Sbjct: 61 GSSKQALLNLMHDQGRNYIFEFDSFPDRDKCREFVASAIAACGEVVKAASEKPAVP-HDE 119
Query: 53 QLSTAEMDHRIKLLQED 3
QLS AEM RIKLLQE+
Sbjct: 120 QLSAAEMGRRIKLLQEN 136
>ref|XP_006352543.1| PREDICTED: probable RNA polymerase II transcription factor B
subunit 1-1-like [Solanum tuberosum]
Length = 599
Score = 200 bits (508), Expect = 4e-49
Identities = 101/137 (73%), Positives = 116/137 (84%)
Frame = -3
Query: 413 MADGQVMKRAKYKSSVKDPGVPGVIKMTRERLVFMPNDPNSSRKLNVEFRMIKGHKFTKE 234
MADG+++KRAKYK+SVK PGVPGV+K+T+ER FMPNDP + KLNVEF++IKGHK +KE
Sbjct: 1 MADGKLVKRAKYKTSVKVPGVPGVLKLTKERFYFMPNDPTLTTKLNVEFKLIKGHKSSKE 60
Query: 233 GSSKQALLNLTQDQGGNYIFEFDSFADRDICREFVAAAIAFHGETGKATSEKPAAPLQDE 54
SSKQALLNLTQ QGGNY+FEFDSF DRD CR+FVA+AIA GE GKATSEKPA P DE
Sbjct: 61 CSSKQALLNLTQAQGGNYLFEFDSFPDRDQCRDFVASAIAACGEIGKATSEKPAVP-HDE 119
Query: 53 QLSTAEMDHRIKLLQED 3
QLS EM RIKLLQE+
Sbjct: 120 QLSATEMGRRIKLLQEN 136
>emb|CDP20682.1| unnamed protein product [Coffea canephora]
Length = 601
Score = 199 bits (506), Expect = 6e-49
Identities = 98/140 (70%), Positives = 118/140 (84%), Gaps = 3/140 (2%)
Frame = -3
Query: 413 MADGQ---VMKRAKYKSSVKDPGVPGVIKMTRERLVFMPNDPNSSRKLNVEFRMIKGHKF 243
MAD Q V+KRA++KSSVKDPG PGV+K+T++R FMPNDP+S K NVEFR IKGHKF
Sbjct: 1 MADKQQQVVVKRARHKSSVKDPGTPGVLKLTKDRFTFMPNDPSSPVKHNVEFRTIKGHKF 60
Query: 242 TKEGSSKQALLNLTQDQGGNYIFEFDSFADRDICREFVAAAIAFHGETGKATSEKPAAPL 63
TK+G+ KQALLNLTQDQGGNYIFEF++F DR++C++FVA+AIA GE G+ EKPA P+
Sbjct: 61 TKDGT-KQALLNLTQDQGGNYIFEFENFPDRNVCKDFVASAIALSGEAGRTVPEKPAVPI 119
Query: 62 QDEQLSTAEMDHRIKLLQED 3
QDEQLS AEM+ RIKLLQED
Sbjct: 120 QDEQLSAAEMERRIKLLQED 139
>ref|XP_011097710.1| PREDICTED: probable RNA polymerase II transcription factor B
subunit 1-1 isoform X3 [Sesamum indicum]
Length = 591
Score = 198 bits (503), Expect = 1e-48
Identities = 101/137 (73%), Positives = 112/137 (81%)
Frame = -3
Query: 413 MADGQVMKRAKYKSSVKDPGVPGVIKMTRERLVFMPNDPNSSRKLNVEFRMIKGHKFTKE 234
MAD QV+KRAKYKSSVKDPGV GV+KM+ ER VFMPNDP S+ KLNVEFRMIKGHKFTKE
Sbjct: 1 MADKQVIKRAKYKSSVKDPGVAGVLKMSIERFVFMPNDPKSTTKLNVEFRMIKGHKFTKE 60
Query: 233 GSSKQALLNLTQDQGGNYIFEFDSFADRDICREFVAAAIAFHGETGKATSEKPAAPLQDE 54
GSSKQALLNLTQDQGGNYIFEFDSFADRD+CREFVA G+ +K A P+ +E
Sbjct: 61 GSSKQALLNLTQDQGGNYIFEFDSFADRDVCREFVA---------GRVVPDKSAPPVNNE 111
Query: 53 QLSTAEMDHRIKLLQED 3
QLS E + RIKLLQE+
Sbjct: 112 QLSREETERRIKLLQEN 128
>gb|EPS73151.1| hypothetical protein M569_01605, partial [Genlisea aurea]
Length = 281
Score = 197 bits (501), Expect = 2e-48
Identities = 95/137 (69%), Positives = 113/137 (82%)
Frame = -3
Query: 413 MADGQVMKRAKYKSSVKDPGVPGVIKMTRERLVFMPNDPNSSRKLNVEFRMIKGHKFTKE 234
MAD QV+KRAKYKS+VKDPGVPGVIKM E ++F+PNDP S+ KL V+ R++KGHKFTKE
Sbjct: 1 MADKQVVKRAKYKSTVKDPGVPGVIKMNMETIIFLPNDPKSAMKLKVDCRLLKGHKFTKE 60
Query: 233 GSSKQALLNLTQDQGGNYIFEFDSFADRDICREFVAAAIAFHGETGKATSEKPAAPLQDE 54
GSSKQA+LNLT +QGGNYIFEF+ F DRD CREFVA AIA H E GK+ +E+ AP E
Sbjct: 61 GSSKQAMLNLTMEQGGNYIFEFECFPDRDACREFVANAIALHAEPGKSVAERVDAPATGE 120
Query: 53 QLSTAEMDHRIKLLQED 3
QLS AE++ RIKLLQE+
Sbjct: 121 QLSRAELERRIKLLQEN 137
>ref|XP_012841835.1| PREDICTED: probable RNA polymerase II transcription factor B
subunit 1-1 [Erythranthe guttatus]
Length = 590
Score = 194 bits (494), Expect = 1e-47
Identities = 97/137 (70%), Positives = 116/137 (84%)
Frame = -3
Query: 413 MADGQVMKRAKYKSSVKDPGVPGVIKMTRERLVFMPNDPNSSRKLNVEFRMIKGHKFTKE 234
MA QV+KRAKYKS+VKDPGVPG++++T ER VF PNDP S+ KLNVEF++IKGHKFTK+
Sbjct: 1 MAAKQVIKRAKYKSAVKDPGVPGILELTIERFVFRPNDPKSTTKLNVEFKLIKGHKFTKD 60
Query: 233 GSSKQALLNLTQDQGGNYIFEFDSFADRDICREFVAAAIAFHGETGKATSEKPAAPLQDE 54
G SKQALLNLTQDQGGNYIFEF +FADRD+C+EFVA A+AFH E+GK EK P+ +E
Sbjct: 61 G-SKQALLNLTQDQGGNYIFEFTNFADRDVCKEFVANALAFHSESGKTIPEKSDVPV-NE 118
Query: 53 QLSTAEMDHRIKLLQED 3
LSTAE + RIKLLQE+
Sbjct: 119 HLSTAETEQRIKLLQEN 135
>ref|XP_010644655.1| PREDICTED: probable RNA polymerase II transcription factor B
subunit 1-1 isoform X2 [Vitis vinifera]
Length = 576
Score = 176 bits (445), Expect = 7e-42
Identities = 87/136 (63%), Positives = 108/136 (79%), Gaps = 2/136 (1%)
Frame = -3
Query: 404 GQVMKRAKYKSSVKDPGVPGVIKMTRERLVFMPNDPNSSRKLNVEFRMIKGHKFTKEGSS 225
G+V+KRA+YK+SVKD GV GV+KMT ++ VFMPNDP SS + +VEFR IKGHKF+K GS+
Sbjct: 3 GEVLKRARYKTSVKDSGVAGVLKMTEDKFVFMPNDPTSSARFDVEFRFIKGHKFSKGGSN 62
Query: 224 KQALLNLTQD--QGGNYIFEFDSFADRDICREFVAAAIAFHGETGKATSEKPAAPLQDEQ 51
K ALLNLTQD +GG YIFEF+++ DR++CREFV A+A E KA SE+ A L DEQ
Sbjct: 63 KPALLNLTQDSEKGGGYIFEFENYPDREVCREFVGRALAKFSEASKAGSEQSAVKLFDEQ 122
Query: 50 LSTAEMDHRIKLLQED 3
LST EM+ RIKLL+ED
Sbjct: 123 LSTIEMERRIKLLRED 138
>ref|XP_002276057.1| PREDICTED: probable RNA polymerase II transcription factor B
subunit 1-1 isoform X1 [Vitis vinifera]
gi|296090002|emb|CBI39821.3| unnamed protein product
[Vitis vinifera]
Length = 602
Score = 176 bits (445), Expect = 7e-42
Identities = 87/136 (63%), Positives = 108/136 (79%), Gaps = 2/136 (1%)
Frame = -3
Query: 404 GQVMKRAKYKSSVKDPGVPGVIKMTRERLVFMPNDPNSSRKLNVEFRMIKGHKFTKEGSS 225
G+V+KRA+YK+SVKD GV GV+KMT ++ VFMPNDP SS + +VEFR IKGHKF+K GS+
Sbjct: 3 GEVLKRARYKTSVKDSGVAGVLKMTEDKFVFMPNDPTSSARFDVEFRFIKGHKFSKGGSN 62
Query: 224 KQALLNLTQD--QGGNYIFEFDSFADRDICREFVAAAIAFHGETGKATSEKPAAPLQDEQ 51
K ALLNLTQD +GG YIFEF+++ DR++CREFV A+A E KA SE+ A L DEQ
Sbjct: 63 KPALLNLTQDSEKGGGYIFEFENYPDREVCREFVGRALAKFSEASKAGSEQSAVKLFDEQ 122
Query: 50 LSTAEMDHRIKLLQED 3
LST EM+ RIKLL+ED
Sbjct: 123 LSTIEMERRIKLLRED 138
>emb|CAN79528.1| hypothetical protein VITISV_026261 [Vitis vinifera]
Length = 735
Score = 176 bits (445), Expect = 7e-42
Identities = 87/136 (63%), Positives = 108/136 (79%), Gaps = 2/136 (1%)
Frame = -3
Query: 404 GQVMKRAKYKSSVKDPGVPGVIKMTRERLVFMPNDPNSSRKLNVEFRMIKGHKFTKEGSS 225
G+V+KRA+YK+SVKD GV GV+KMT ++ VFMPNDP SS + +VEFR IKGHKF+K GS+
Sbjct: 3 GEVLKRARYKTSVKDSGVAGVLKMTEDKFVFMPNDPTSSARFDVEFRFIKGHKFSKGGSN 62
Query: 224 KQALLNLTQD--QGGNYIFEFDSFADRDICREFVAAAIAFHGETGKATSEKPAAPLQDEQ 51
K ALLNLTQD +GG YIFEF+++ DR++CREFV A+A E KA SE+ A L DEQ
Sbjct: 63 KPALLNLTQDSEKGGGYIFEFENYPDREVCREFVGKALAKFSEASKAGSEQSAVKLFDEQ 122
Query: 50 LSTAEMDHRIKLLQED 3
LST EM+ RIKLL+ED
Sbjct: 123 LSTIEMERRIKLLRED 138
>gb|KCW51965.1| hypothetical protein EUGRSUZ_J01409 [Eucalyptus grandis]
Length = 552
Score = 166 bits (419), Expect = 7e-39
Identities = 83/137 (60%), Positives = 102/137 (74%)
Frame = -3
Query: 413 MADGQVMKRAKYKSSVKDPGVPGVIKMTRERLVFMPNDPNSSRKLNVEFRMIKGHKFTKE 234
MA QV+KRAKYK++VKDPG GV+KM +R +F PN PNS+ L+VEFR IKGHK TKE
Sbjct: 1 MASAQVIKRAKYKTTVKDPGTAGVLKMAWDRFIFTPNHPNSASNLDVEFRFIKGHKNTKE 60
Query: 233 GSSKQALLNLTQDQGGNYIFEFDSFADRDICREFVAAAIAFHGETGKATSEKPAAPLQDE 54
GS+K LNLT DQGG+YIFEF+S+ D CR+FV +I GET A S K A L DE
Sbjct: 61 GSNKPPWLNLTNDQGGSYIFEFESYPDLHTCRDFVGKSIGRSGETPTAASGKTDASLPDE 120
Query: 53 QLSTAEMDHRIKLLQED 3
Q+STAE++ RIKLL+E+
Sbjct: 121 QISTAELELRIKLLREN 137
>ref|XP_010032566.1| PREDICTED: probable RNA polymerase II transcription factor B
subunit 1-1 [Eucalyptus grandis]
gi|629085607|gb|KCW51964.1| hypothetical protein
EUGRSUZ_J01409 [Eucalyptus grandis]
Length = 596
Score = 166 bits (419), Expect = 7e-39
Identities = 83/137 (60%), Positives = 102/137 (74%)
Frame = -3
Query: 413 MADGQVMKRAKYKSSVKDPGVPGVIKMTRERLVFMPNDPNSSRKLNVEFRMIKGHKFTKE 234
MA QV+KRAKYK++VKDPG GV+KM +R +F PN PNS+ L+VEFR IKGHK TKE
Sbjct: 1 MASAQVIKRAKYKTTVKDPGTAGVLKMAWDRFIFTPNHPNSASNLDVEFRFIKGHKNTKE 60
Query: 233 GSSKQALLNLTQDQGGNYIFEFDSFADRDICREFVAAAIAFHGETGKATSEKPAAPLQDE 54
GS+K LNLT DQGG+YIFEF+S+ D CR+FV +I GET A S K A L DE
Sbjct: 61 GSNKPPWLNLTNDQGGSYIFEFESYPDLHTCRDFVGKSIGRSGETPTAASGKTDASLPDE 120
Query: 53 QLSTAEMDHRIKLLQED 3
Q+STAE++ RIKLL+E+
Sbjct: 121 QISTAELELRIKLLREN 137
>gb|KCW51963.1| hypothetical protein EUGRSUZ_J01409 [Eucalyptus grandis]
Length = 591
Score = 166 bits (419), Expect = 7e-39
Identities = 83/137 (60%), Positives = 102/137 (74%)
Frame = -3
Query: 413 MADGQVMKRAKYKSSVKDPGVPGVIKMTRERLVFMPNDPNSSRKLNVEFRMIKGHKFTKE 234
MA QV+KRAKYK++VKDPG GV+KM +R +F PN PNS+ L+VEFR IKGHK TKE
Sbjct: 1 MASAQVIKRAKYKTTVKDPGTAGVLKMAWDRFIFTPNHPNSASNLDVEFRFIKGHKNTKE 60
Query: 233 GSSKQALLNLTQDQGGNYIFEFDSFADRDICREFVAAAIAFHGETGKATSEKPAAPLQDE 54
GS+K LNLT DQGG+YIFEF+S+ D CR+FV +I GET A S K A L DE
Sbjct: 61 GSNKPPWLNLTNDQGGSYIFEFESYPDLHTCRDFVGKSIGRSGETPTAASGKTDASLPDE 120
Query: 53 QLSTAEMDHRIKLLQED 3
Q+STAE++ RIKLL+E+
Sbjct: 121 QISTAELELRIKLLREN 137
>ref|XP_008457279.1| PREDICTED: probable RNA polymerase II transcription factor B
subunit 1-1 isoform X2 [Cucumis melo]
Length = 533
Score = 163 bits (412), Expect = 5e-38
Identities = 81/137 (59%), Positives = 102/137 (74%)
Frame = -3
Query: 413 MADGQVMKRAKYKSSVKDPGVPGVIKMTRERLVFMPNDPNSSRKLNVEFRMIKGHKFTKE 234
M V K AKYK+SVKDPG PGV++MT + VF P+DP S+ KL+VEFR IKGHK TKE
Sbjct: 1 MGTKYVHKSAKYKTSVKDPGTPGVLEMTECKFVFRPSDPTSASKLDVEFRFIKGHKNTKE 60
Query: 233 GSSKQALLNLTQDQGGNYIFEFDSFADRDICREFVAAAIAFHGETGKATSEKPAAPLQDE 54
GS+K LNLT+DQGG+YIFEF +F+D +CREFV +A+A GE +A SE+P A E
Sbjct: 61 GSNKPPWLNLTKDQGGSYIFEFKNFSDLHVCREFVGSALAKLGEAAQAPSERPVAAFPHE 120
Query: 53 QLSTAEMDHRIKLLQED 3
QLS +EM+ R++ LQED
Sbjct: 121 QLSKSEMELRMRCLQED 137
>ref|XP_008457278.1| PREDICTED: probable RNA polymerase II transcription factor B
subunit 1-1 isoform X1 [Cucumis melo]
Length = 595
Score = 163 bits (412), Expect = 5e-38
Identities = 81/137 (59%), Positives = 102/137 (74%)
Frame = -3
Query: 413 MADGQVMKRAKYKSSVKDPGVPGVIKMTRERLVFMPNDPNSSRKLNVEFRMIKGHKFTKE 234
M V K AKYK+SVKDPG PGV++MT + VF P+DP S+ KL+VEFR IKGHK TKE
Sbjct: 1 MGTKYVHKSAKYKTSVKDPGTPGVLEMTECKFVFRPSDPTSASKLDVEFRFIKGHKNTKE 60
Query: 233 GSSKQALLNLTQDQGGNYIFEFDSFADRDICREFVAAAIAFHGETGKATSEKPAAPLQDE 54
GS+K LNLT+DQGG+YIFEF +F+D +CREFV +A+A GE +A SE+P A E
Sbjct: 61 GSNKPPWLNLTKDQGGSYIFEFKNFSDLHVCREFVGSALAKLGEAAQAPSERPVAAFPHE 120
Query: 53 QLSTAEMDHRIKLLQED 3
QLS +EM+ R++ LQED
Sbjct: 121 QLSKSEMELRMRCLQED 137
>ref|XP_010246174.1| PREDICTED: LOW QUALITY PROTEIN: probable RNA polymerase II
transcription factor B subunit 1-1 [Nelumbo nucifera]
Length = 611
Score = 162 bits (411), Expect = 6e-38
Identities = 85/146 (58%), Positives = 108/146 (73%), Gaps = 9/146 (6%)
Frame = -3
Query: 413 MADGQVMKRAKYK-SSVKDPGVPGVIKMTRERLVFMPNDPNSSRKLNVEFRMIKGHKFTK 237
MA GQV+ AKYK +S K+PG+PG+++MT ++ VF PN+P SS KL+V F IKGHKFTK
Sbjct: 1 MAAGQVVMNAKYKKTSPKEPGIPGILRMTEDKFVFTPNEPMSSGKLSVSFGSIKGHKFTK 60
Query: 236 EGSSKQALLNLTQD--QGGNYIFEFDSFADRDICREFVA------AAIAFHGETGKATSE 81
EG SKQALLNLTQD GG YIFEFD F+DRD+CR+FV ++ G+ +A SE
Sbjct: 61 EG-SKQALLNLTQDPEMGGGYIFEFDKFSDRDVCRDFVGKVLGKIQSMVSSGQDARAVSE 119
Query: 80 KPAAPLQDEQLSTAEMDHRIKLLQED 3
+ A + DEQLST EM+HR+KLL+ED
Sbjct: 120 RSAVAVHDEQLSTREMEHRMKLLRED 145