BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Forsythia21_contig00016663
         (1366 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_009589062.1| PREDICTED: RNA pseudouridine synthase 5 isof...   559   e-156
ref|XP_011084348.1| PREDICTED: RNA pseudouridine synthase 5 isof...   556   e-155
ref|XP_009803600.1| PREDICTED: RNA pseudouridine synthase 5 isof...   555   e-155
ref|XP_012834924.1| PREDICTED: RNA pseudouridine synthase 5 [Ery...   555   e-155
ref|XP_009589060.1| PREDICTED: RNA pseudouridine synthase 5 isof...   553   e-154
ref|XP_009803599.1| PREDICTED: RNA pseudouridine synthase 5 isof...   547   e-153
ref|XP_006346977.1| PREDICTED: RNA pseudouridine synthase 5-like...   546   e-152
ref|XP_010317225.1| PREDICTED: RNA pseudouridine synthase 5 isof...   545   e-152
ref|XP_010317224.1| PREDICTED: RNA pseudouridine synthase 5 isof...   545   e-152
ref|XP_004233537.1| PREDICTED: RNA pseudouridine synthase 5 isof...   545   e-152
ref|XP_010658419.1| PREDICTED: RNA pseudouridine synthase 5 isof...   540   e-151
ref|XP_006346975.1| PREDICTED: RNA pseudouridine synthase 5-like...   540   e-151
ref|XP_011031774.1| PREDICTED: RNA pseudouridine synthase 5 isof...   540   e-150
ref|XP_008233344.1| PREDICTED: RNA pseudouridine synthase 5 isof...   538   e-150
ref|XP_004307403.1| PREDICTED: RNA pseudouridine synthase 5 [Fra...   536   e-149
ref|XP_011031773.1| PREDICTED: RNA pseudouridine synthase 5 isof...   536   e-149
ref|XP_009589057.1| PREDICTED: RNA pseudouridine synthase 5 isof...   535   e-149
ref|XP_002312025.1| hypothetical protein POPTR_0008s04160g [Popu...   535   e-149
ref|XP_007009784.1| Pseudouridine synthase family protein [Theob...   533   e-148
ref|XP_009589063.1| PREDICTED: RNA pseudouridine synthase 5 isof...   531   e-148

>ref|XP_009589062.1| PREDICTED: RNA pseudouridine synthase 5 isoform X6 [Nicotiana
            tomentosiformis]
          Length = 381

 Score =  559 bits (1441), Expect = e-156
 Identities = 277/361 (76%), Positives = 312/361 (86%), Gaps = 1/361 (0%)
 Frame = -3

Query: 1346 FGEPWPELNDGLNYRDLLRSSDAGLKLIEFYSKKYKNSAPLLGWLQRIHNKQITIDGDAV 1167
            FGEPWPE NDGL Y D++R  DAGL LIEFYS+KYK+SAPL GWLQRI NKQIT+D   V
Sbjct: 16   FGEPWPEFNDGLTYHDMVRPIDAGLTLIEFYSRKYKSSAPLQGWLQRIQNKQITVDSKVV 75

Query: 1166 TKPDTILREGMELIYYRLPWKEPDAPYLLEILYEDDDVIALNKPSGLQVLPGGLFQQRTV 987
            T PDT LR G EL+Y+RLPW+EPDAPYLL++L+EDD +IALNKPSGLQVLPGGLFQQRTV
Sbjct: 76   TIPDTELRAGTELVYHRLPWREPDAPYLLQVLFEDDYLIALNKPSGLQVLPGGLFQQRTV 135

Query: 986  LTQLQWRSLK-RTSSSAFQEPPPVPVHRLGRGTSGILLCAKTKVAKSRLAAYFADGTSVV 810
            LTQLQW   K  TSSS  ++  PVPVHRLGRGTSGILLCAKTK+AKSRLAAYFA+GTSVV
Sbjct: 136  LTQLQWHVSKLTTSSSGCRKTHPVPVHRLGRGTSGILLCAKTKLAKSRLAAYFAEGTSVV 195

Query: 809  GVSRHTNSELKTMRKITKIYRALASGVINEDEVVVEQPIGQIRYPGVAKGLYVASPSGKP 630
               ++TNSE K MRKI+KIYRAL SGVI+ DEV+++QPIG I+YPGVAKGLYVASPSGKP
Sbjct: 196  E-DKYTNSECKKMRKISKIYRALVSGVIDMDEVLIKQPIGTIKYPGVAKGLYVASPSGKP 254

Query: 629  SFSRVGVLERNIHSNCTLVQVEIQSGRPHQIRIHLSFIGHPLIGDPLYVAGGQPKCFDPE 450
            + S V VLER++ +N TLVQVEIQSGRPHQIRIHLSFIG PLIGDPLYV+GGQPKCFDPE
Sbjct: 255  ALSSVHVLERDLENNSTLVQVEIQSGRPHQIRIHLSFIGLPLIGDPLYVSGGQPKCFDPE 314

Query: 449  VMDESFVHDGGYQRPEKPVPGDCGYHLHAHRSVFPHPITDEVIDITASLPYILQTQEESK 270
            +MDESF  DGGYQRPE PVPGDCGY+LHAH+ V  HPIT+E+I ITA LP ILQT+EE K
Sbjct: 315  LMDESFEKDGGYQRPENPVPGDCGYNLHAHQIVLIHPITNELIKITAPLPSILQTREERK 374

Query: 269  A 267
            A
Sbjct: 375  A 375


>ref|XP_011084348.1| PREDICTED: RNA pseudouridine synthase 5 isoform X1 [Sesamum indicum]
          Length = 380

 Score =  556 bits (1433), Expect = e-155
 Identities = 272/363 (74%), Positives = 310/363 (85%)
 Frame = -3

Query: 1355 MQSFGEPWPELNDGLNYRDLLRSSDAGLKLIEFYSKKYKNSAPLLGWLQRIHNKQITIDG 1176
            M SFGEPWPE NDG+ YRDL+R+S +G  LIEFYS+KY++SAPL GWLQRIHNKQITIDG
Sbjct: 1    MVSFGEPWPEFNDGIYYRDLVRASGSGATLIEFYSRKYESSAPLHGWLQRIHNKQITIDG 60

Query: 1175 DAVTKPDTILREGMELIYYRLPWKEPDAPYLLEILYEDDDVIALNKPSGLQVLPGGLFQQ 996
               T P+TILREG EL+Y+RLPWKEPDAPYLLEILYED+DVIALNKPSGLQVLPGGLFQQ
Sbjct: 61   CLATDPNTILREGAELVYHRLPWKEPDAPYLLEILYEDNDVIALNKPSGLQVLPGGLFQQ 120

Query: 995  RTVLTQLQWRSLKRTSSSAFQEPPPVPVHRLGRGTSGILLCAKTKVAKSRLAAYFADGTS 816
            RTVLTQLQ R+   T+S   QE  PVPVHRLGRGTSGILLCAKTK+AKSRLAA+FADGTS
Sbjct: 121  RTVLTQLQLRAGNLTTSGC-QEAHPVPVHRLGRGTSGILLCAKTKLAKSRLAAFFADGTS 179

Query: 815  VVGVSRHTNSELKTMRKITKIYRALASGVINEDEVVVEQPIGQIRYPGVAKGLYVASPSG 636
             VG+ R  + + K  R ITKIYRAL SG+I EDE+++EQPIG +RYPGVAKGLYVASPSG
Sbjct: 180  NVGIYRRNDPQQKAGRSITKIYRALVSGIIIEDEIIIEQPIGLVRYPGVAKGLYVASPSG 239

Query: 635  KPSFSRVGVLERNIHSNCTLVQVEIQSGRPHQIRIHLSFIGHPLIGDPLYVAGGQPKCFD 456
            KP+ S+V VLER++    TLVQVEIQSGRPHQIRIH+SFIGHPL+GDPLY  GGQPKC +
Sbjct: 240  KPALSKVVVLERDMLRKSTLVQVEIQSGRPHQIRIHVSFIGHPLVGDPLYGTGGQPKCSN 299

Query: 455  PEVMDESFVHDGGYQRPEKPVPGDCGYHLHAHRSVFPHPITDEVIDITASLPYILQTQEE 276
             EV+++SF  DGGY+RP KPVPGDCGYHLHAHR VFPHP+T+E+I IT+ LP IL T EE
Sbjct: 300  HEVVNQSFAEDGGYERPGKPVPGDCGYHLHAHRLVFPHPVTNEIIKITSPLPSILLTTEE 359

Query: 275  SKA 267
            S A
Sbjct: 360  SNA 362


>ref|XP_009803600.1| PREDICTED: RNA pseudouridine synthase 5 isoform X2 [Nicotiana
            sylvestris]
          Length = 384

 Score =  555 bits (1430), Expect = e-155
 Identities = 276/361 (76%), Positives = 311/361 (86%), Gaps = 1/361 (0%)
 Frame = -3

Query: 1346 FGEPWPELNDGLNYRDLLRSSDAGLKLIEFYSKKYKNSAPLLGWLQRIHNKQITIDGDAV 1167
            FGE W E NDGL Y D++R  DAGL LIEFYS+KYK+SAPL GWLQRI NKQIT+DG  V
Sbjct: 19   FGETWREFNDGLTYHDIVRRIDAGLTLIEFYSRKYKSSAPLQGWLQRIQNKQITVDGKVV 78

Query: 1166 TKPDTILREGMELIYYRLPWKEPDAPYLLEILYEDDDVIALNKPSGLQVLPGGLFQQRTV 987
            T PDT LR G EL+Y+RLPW+EPDAPYLL++L+ED+ +IALNKPSGLQVLPGGLFQQRTV
Sbjct: 79   TIPDTELRAGTELVYHRLPWREPDAPYLLQVLFEDNYLIALNKPSGLQVLPGGLFQQRTV 138

Query: 986  LTQLQWRSLK-RTSSSAFQEPPPVPVHRLGRGTSGILLCAKTKVAKSRLAAYFADGTSVV 810
            LTQLQW   K  TSSS  ++  PVPVHRLGRGTSGILLCAKTK+AKSRLAAYFA+GTSVV
Sbjct: 139  LTQLQWHVSKLTTSSSGCRKTHPVPVHRLGRGTSGILLCAKTKLAKSRLAAYFAEGTSVV 198

Query: 809  GVSRHTNSELKTMRKITKIYRALASGVINEDEVVVEQPIGQIRYPGVAKGLYVASPSGKP 630
               ++TNSE K MRKI+KIYRAL SGVI+ DEVV++QPIG I+YPGVAKGLYVASPSGKP
Sbjct: 199  E-DKYTNSECKKMRKISKIYRALVSGVIDMDEVVIKQPIGTIKYPGVAKGLYVASPSGKP 257

Query: 629  SFSRVGVLERNIHSNCTLVQVEIQSGRPHQIRIHLSFIGHPLIGDPLYVAGGQPKCFDPE 450
            + S V VLER++ +N TLVQVEIQSGRPHQIRIHLSFIG PLIGDPLYV+GGQPKCFDPE
Sbjct: 258  ALSSVRVLERDLENNSTLVQVEIQSGRPHQIRIHLSFIGLPLIGDPLYVSGGQPKCFDPE 317

Query: 449  VMDESFVHDGGYQRPEKPVPGDCGYHLHAHRSVFPHPITDEVIDITASLPYILQTQEESK 270
            +MDESF  DGGYQRPE PVPGDCGY+LHAH+ V  HPIT+E+I ITA LP ILQT+EE K
Sbjct: 318  LMDESFEKDGGYQRPENPVPGDCGYNLHAHQIVLIHPITNELIQITAPLPSILQTREEGK 377

Query: 269  A 267
            A
Sbjct: 378  A 378


>ref|XP_012834924.1| PREDICTED: RNA pseudouridine synthase 5 [Erythranthe guttatus]
            gi|604335938|gb|EYU39826.1| hypothetical protein
            MIMGU_mgv1a008941mg [Erythranthe guttata]
          Length = 357

 Score =  555 bits (1429), Expect = e-155
 Identities = 268/356 (75%), Positives = 308/356 (86%)
 Frame = -3

Query: 1355 MQSFGEPWPELNDGLNYRDLLRSSDAGLKLIEFYSKKYKNSAPLLGWLQRIHNKQITIDG 1176
            M SFG+PWPE NDG+ YRDLLR SD G  LIEFYS+KY++SAPL GWLQRIHNKQIT++G
Sbjct: 1    MVSFGDPWPEFNDGIYYRDLLRPSDDGATLIEFYSRKYQSSAPLHGWLQRIHNKQITVNG 60

Query: 1175 DAVTKPDTILREGMELIYYRLPWKEPDAPYLLEILYEDDDVIALNKPSGLQVLPGGLFQQ 996
              VT P+TILR G EL+Y+RLPWKEPDAP+L+EILYEDDDVIALNKPSGLQVLPGGLFQQ
Sbjct: 61   GVVTDPNTILRGGAELVYHRLPWKEPDAPHLVEILYEDDDVIALNKPSGLQVLPGGLFQQ 120

Query: 995  RTVLTQLQWRSLKRTSSSAFQEPPPVPVHRLGRGTSGILLCAKTKVAKSRLAAYFADGTS 816
            RTVLTQLQ        +   QEP PVPVHRLGRGTSGILLCAKTK+AKSRLAA+FADGTS
Sbjct: 121  RTVLTQLQ------RHAGGCQEPHPVPVHRLGRGTSGILLCAKTKLAKSRLAAFFADGTS 174

Query: 815  VVGVSRHTNSELKTMRKITKIYRALASGVINEDEVVVEQPIGQIRYPGVAKGLYVASPSG 636
            VVGV R  + + K+ R ITK+YRALASG+I EDEVV++QPIG ++YPGVA GLYVASPSG
Sbjct: 175  VVGVCRENDQQQKSTRNITKLYRALASGIIIEDEVVIDQPIGLVKYPGVANGLYVASPSG 234

Query: 635  KPSFSRVGVLERNIHSNCTLVQVEIQSGRPHQIRIHLSFIGHPLIGDPLYVAGGQPKCFD 456
            KP++S+V VLERN+ +N TLVQVEIQSGRPHQIRIHLSFIGHPLIGDPLY  GGQPKC D
Sbjct: 235  KPAWSKVVVLERNMLNNSTLVQVEIQSGRPHQIRIHLSFIGHPLIGDPLYSTGGQPKCSD 294

Query: 455  PEVMDESFVHDGGYQRPEKPVPGDCGYHLHAHRSVFPHPITDEVIDITASLPYILQ 288
             E++D+SF  DGGY+RPEKPVPGDCGYHLHAHR +F HP+++E+I+ITA LP IL+
Sbjct: 295  HELVDQSFAEDGGYERPEKPVPGDCGYHLHAHRVLFTHPVSNEIIEITAPLPSILR 350


>ref|XP_009589060.1| PREDICTED: RNA pseudouridine synthase 5 isoform X5 [Nicotiana
            tomentosiformis]
          Length = 386

 Score =  553 bits (1425), Expect = e-154
 Identities = 277/366 (75%), Positives = 312/366 (85%), Gaps = 6/366 (1%)
 Frame = -3

Query: 1346 FGEPWPELNDGLNYRDLLRSSDAGLKLIEFYSKKYKNSAPLLGWLQRIHNKQITIDGDAV 1167
            FGEPWPE NDGL Y D++R  DAGL LIEFYS+KYK+SAPL GWLQRI NKQIT+D   V
Sbjct: 16   FGEPWPEFNDGLTYHDMVRPIDAGLTLIEFYSRKYKSSAPLQGWLQRIQNKQITVDSKVV 75

Query: 1166 TKPDTIL-----REGMELIYYRLPWKEPDAPYLLEILYEDDDVIALNKPSGLQVLPGGLF 1002
            T PDT L     R G EL+Y+RLPW+EPDAPYLL++L+EDD +IALNKPSGLQVLPGGLF
Sbjct: 76   TIPDTELSFWMSRAGTELVYHRLPWREPDAPYLLQVLFEDDYLIALNKPSGLQVLPGGLF 135

Query: 1001 QQRTVLTQLQWRSLK-RTSSSAFQEPPPVPVHRLGRGTSGILLCAKTKVAKSRLAAYFAD 825
            QQRTVLTQLQW   K  TSSS  ++  PVPVHRLGRGTSGILLCAKTK+AKSRLAAYFA+
Sbjct: 136  QQRTVLTQLQWHVSKLTTSSSGCRKTHPVPVHRLGRGTSGILLCAKTKLAKSRLAAYFAE 195

Query: 824  GTSVVGVSRHTNSELKTMRKITKIYRALASGVINEDEVVVEQPIGQIRYPGVAKGLYVAS 645
            GTSVV   ++TNSE K MRKI+KIYRAL SGVI+ DEV+++QPIG I+YPGVAKGLYVAS
Sbjct: 196  GTSVVE-DKYTNSECKKMRKISKIYRALVSGVIDMDEVLIKQPIGTIKYPGVAKGLYVAS 254

Query: 644  PSGKPSFSRVGVLERNIHSNCTLVQVEIQSGRPHQIRIHLSFIGHPLIGDPLYVAGGQPK 465
            PSGKP+ S V VLER++ +N TLVQVEIQSGRPHQIRIHLSFIG PLIGDPLYV+GGQPK
Sbjct: 255  PSGKPALSSVHVLERDLENNSTLVQVEIQSGRPHQIRIHLSFIGLPLIGDPLYVSGGQPK 314

Query: 464  CFDPEVMDESFVHDGGYQRPEKPVPGDCGYHLHAHRSVFPHPITDEVIDITASLPYILQT 285
            CFDPE+MDESF  DGGYQRPE PVPGDCGY+LHAH+ V  HPIT+E+I ITA LP ILQT
Sbjct: 315  CFDPELMDESFEKDGGYQRPENPVPGDCGYNLHAHQIVLIHPITNELIKITAPLPSILQT 374

Query: 284  QEESKA 267
            +EE KA
Sbjct: 375  REERKA 380


>ref|XP_009803599.1| PREDICTED: RNA pseudouridine synthase 5 isoform X1 [Nicotiana
            sylvestris]
          Length = 393

 Score =  547 bits (1410), Expect = e-153
 Identities = 276/370 (74%), Positives = 311/370 (84%), Gaps = 10/370 (2%)
 Frame = -3

Query: 1346 FGEPWPELNDGLNYRDLLRSSDAG---------LKLIEFYSKKYKNSAPLLGWLQRIHNK 1194
            FGE W E NDGL Y D++R  DAG         L LIEFYS+KYK+SAPL GWLQRI NK
Sbjct: 19   FGETWREFNDGLTYHDIVRRIDAGFLFCAKSTGLTLIEFYSRKYKSSAPLQGWLQRIQNK 78

Query: 1193 QITIDGDAVTKPDTILREGMELIYYRLPWKEPDAPYLLEILYEDDDVIALNKPSGLQVLP 1014
            QIT+DG  VT PDT LR G EL+Y+RLPW+EPDAPYLL++L+ED+ +IALNKPSGLQVLP
Sbjct: 79   QITVDGKVVTIPDTELRAGTELVYHRLPWREPDAPYLLQVLFEDNYLIALNKPSGLQVLP 138

Query: 1013 GGLFQQRTVLTQLQWRSLK-RTSSSAFQEPPPVPVHRLGRGTSGILLCAKTKVAKSRLAA 837
            GGLFQQRTVLTQLQW   K  TSSS  ++  PVPVHRLGRGTSGILLCAKTK+AKSRLAA
Sbjct: 139  GGLFQQRTVLTQLQWHVSKLTTSSSGCRKTHPVPVHRLGRGTSGILLCAKTKLAKSRLAA 198

Query: 836  YFADGTSVVGVSRHTNSELKTMRKITKIYRALASGVINEDEVVVEQPIGQIRYPGVAKGL 657
            YFA+GTSVV   ++TNSE K MRKI+KIYRAL SGVI+ DEVV++QPIG I+YPGVAKGL
Sbjct: 199  YFAEGTSVVE-DKYTNSECKKMRKISKIYRALVSGVIDMDEVVIKQPIGTIKYPGVAKGL 257

Query: 656  YVASPSGKPSFSRVGVLERNIHSNCTLVQVEIQSGRPHQIRIHLSFIGHPLIGDPLYVAG 477
            YVASPSGKP+ S V VLER++ +N TLVQVEIQSGRPHQIRIHLSFIG PLIGDPLYV+G
Sbjct: 258  YVASPSGKPALSSVRVLERDLENNSTLVQVEIQSGRPHQIRIHLSFIGLPLIGDPLYVSG 317

Query: 476  GQPKCFDPEVMDESFVHDGGYQRPEKPVPGDCGYHLHAHRSVFPHPITDEVIDITASLPY 297
            GQPKCFDPE+MDESF  DGGYQRPE PVPGDCGY+LHAH+ V  HPIT+E+I ITA LP 
Sbjct: 318  GQPKCFDPELMDESFEKDGGYQRPENPVPGDCGYNLHAHQIVLIHPITNELIQITAPLPS 377

Query: 296  ILQTQEESKA 267
            ILQT+EE KA
Sbjct: 378  ILQTREEGKA 387


>ref|XP_006346977.1| PREDICTED: RNA pseudouridine synthase 5-like isoform X3 [Solanum
            tuberosum]
          Length = 374

 Score =  546 bits (1408), Expect = e-152
 Identities = 270/361 (74%), Positives = 307/361 (85%), Gaps = 1/361 (0%)
 Frame = -3

Query: 1346 FGEPWPELNDGLNYRDLLRSSDAGLKLIEFYSKKYKNSAPLLGWLQRIHNKQITIDGDAV 1167
            FG  WPELN+GL Y D++R +DAGL LIEFY +KYKNSAPL GWLQRI NKQITIDG  V
Sbjct: 14   FGVSWPELNEGLTYHDIVRPTDAGLMLIEFYFRKYKNSAPLQGWLQRIQNKQITIDGKVV 73

Query: 1166 TKPDTILREGMELIYYRLPWKEPDAPYLLEILYEDDDVIALNKPSGLQVLPGGLFQQRTV 987
              PDT LR G EL+Y+RLPW+EPDAPYLLE+L++DD +I +NKPSGLQVLPGGL+QQRTV
Sbjct: 74   ILPDTELRAGAELVYHRLPWREPDAPYLLEVLFQDDYLIVVNKPSGLQVLPGGLYQQRTV 133

Query: 986  LTQLQWRSLK-RTSSSAFQEPPPVPVHRLGRGTSGILLCAKTKVAKSRLAAYFADGTSVV 810
            LTQLQW + K  T+SS  Q+  PVPVHRLGRGTSGILLCAKTK+ KSRLAAYFA+GTSVV
Sbjct: 134  LTQLQWHACKPTTTSSGCQKTHPVPVHRLGRGTSGILLCAKTKLCKSRLAAYFAEGTSVV 193

Query: 809  GVSRHTNSELKTMRKITKIYRALASGVINEDEVVVEQPIGQIRYPGVAKGLYVASPSGKP 630
               + TNSE  TMRKI KIYRAL SGV++ DEVV++QPIG I+YPGVAKGLYVASPSGKP
Sbjct: 194  E-DKCTNSECNTMRKICKIYRALVSGVMDMDEVVIKQPIGTIKYPGVAKGLYVASPSGKP 252

Query: 629  SFSRVGVLERNIHSNCTLVQVEIQSGRPHQIRIHLSFIGHPLIGDPLYVAGGQPKCFDPE 450
            + S V VLER+  +NCTLVQVEIQSGRPHQIRIHLSFIG+PLIGDPLYV+GGQPKCF PE
Sbjct: 253  ALSSVRVLERDSENNCTLVQVEIQSGRPHQIRIHLSFIGYPLIGDPLYVSGGQPKCFHPE 312

Query: 449  VMDESFVHDGGYQRPEKPVPGDCGYHLHAHRSVFPHPITDEVIDITASLPYILQTQEESK 270
            +MDESF  DGGYQRPE PVPGDCGY+LHAH+    HPIT+E+I ITA LP ILQT+EE +
Sbjct: 313  LMDESFEKDGGYQRPENPVPGDCGYNLHAHQIGLIHPITNELIKITAPLPAILQTREERE 372

Query: 269  A 267
            A
Sbjct: 373  A 373


>ref|XP_010317225.1| PREDICTED: RNA pseudouridine synthase 5 isoform X3 [Solanum
            lycopersicum] gi|723677756|ref|XP_010317226.1| PREDICTED:
            RNA pseudouridine synthase 5 isoform X3 [Solanum
            lycopersicum] gi|723677759|ref|XP_010317227.1| PREDICTED:
            RNA pseudouridine synthase 5 isoform X3 [Solanum
            lycopersicum]
          Length = 379

 Score =  545 bits (1404), Expect = e-152
 Identities = 268/361 (74%), Positives = 307/361 (85%), Gaps = 1/361 (0%)
 Frame = -3

Query: 1346 FGEPWPELNDGLNYRDLLRSSDAGLKLIEFYSKKYKNSAPLLGWLQRIHNKQITIDGDAV 1167
            FG PWP+ N+GL+Y D++R +DAGL LIEFY +KYKNSAPL GWLQRI NKQITIDG  V
Sbjct: 14   FGVPWPQRNEGLSYHDIVRPTDAGLTLIEFYFRKYKNSAPLQGWLQRIQNKQITIDGKVV 73

Query: 1166 TKPDTILREGMELIYYRLPWKEPDAPYLLEILYEDDDVIALNKPSGLQVLPGGLFQQRTV 987
              PDT LR G EL+Y+RLPW+EPDAPYLLE+L+EDD +I +NKPSGLQVLPGGL+QQRTV
Sbjct: 74   ILPDTELRAGAELVYHRLPWREPDAPYLLEVLFEDDYLIVVNKPSGLQVLPGGLYQQRTV 133

Query: 986  LTQLQWRSLK-RTSSSAFQEPPPVPVHRLGRGTSGILLCAKTKVAKSRLAAYFADGTSVV 810
            LTQLQW + K  T+SS  Q+  PVPVHRLGRGTSGILLCAKTK+ KSRLAAYFA+GTSVV
Sbjct: 134  LTQLQWHACKLTTTSSGCQKTHPVPVHRLGRGTSGILLCAKTKLCKSRLAAYFAEGTSVV 193

Query: 809  GVSRHTNSELKTMRKITKIYRALASGVINEDEVVVEQPIGQIRYPGVAKGLYVASPSGKP 630
               + TNSE  TMRKI KIYRAL SGV++ DE V++QPIG I+YPGVAKGLYVASPSGKP
Sbjct: 194  E-EKCTNSECNTMRKICKIYRALVSGVMDMDEAVIKQPIGTIKYPGVAKGLYVASPSGKP 252

Query: 629  SFSRVGVLERNIHSNCTLVQVEIQSGRPHQIRIHLSFIGHPLIGDPLYVAGGQPKCFDPE 450
            + S V VLER+  SNCTLVQVEIQSGRPHQIRIHLSFIG+PLIGDPLYV+GGQPKCF PE
Sbjct: 253  ALSSVRVLERDSESNCTLVQVEIQSGRPHQIRIHLSFIGYPLIGDPLYVSGGQPKCFHPE 312

Query: 449  VMDESFVHDGGYQRPEKPVPGDCGYHLHAHRSVFPHPITDEVIDITASLPYILQTQEESK 270
            ++DESF  DGGYQRPE PVPGDCGY+LHAH+    HPIT+E+I ITA LP ILQT++E +
Sbjct: 313  LLDESFEKDGGYQRPENPVPGDCGYNLHAHQIGLIHPITNELIKITAPLPAILQTRDERE 372

Query: 269  A 267
            A
Sbjct: 373  A 373


>ref|XP_010317224.1| PREDICTED: RNA pseudouridine synthase 5 isoform X2 [Solanum
            lycopersicum]
          Length = 393

 Score =  545 bits (1404), Expect = e-152
 Identities = 268/361 (74%), Positives = 307/361 (85%), Gaps = 1/361 (0%)
 Frame = -3

Query: 1346 FGEPWPELNDGLNYRDLLRSSDAGLKLIEFYSKKYKNSAPLLGWLQRIHNKQITIDGDAV 1167
            FG PWP+ N+GL+Y D++R +DAGL LIEFY +KYKNSAPL GWLQRI NKQITIDG  V
Sbjct: 28   FGVPWPQRNEGLSYHDIVRPTDAGLTLIEFYFRKYKNSAPLQGWLQRIQNKQITIDGKVV 87

Query: 1166 TKPDTILREGMELIYYRLPWKEPDAPYLLEILYEDDDVIALNKPSGLQVLPGGLFQQRTV 987
              PDT LR G EL+Y+RLPW+EPDAPYLLE+L+EDD +I +NKPSGLQVLPGGL+QQRTV
Sbjct: 88   ILPDTELRAGAELVYHRLPWREPDAPYLLEVLFEDDYLIVVNKPSGLQVLPGGLYQQRTV 147

Query: 986  LTQLQWRSLK-RTSSSAFQEPPPVPVHRLGRGTSGILLCAKTKVAKSRLAAYFADGTSVV 810
            LTQLQW + K  T+SS  Q+  PVPVHRLGRGTSGILLCAKTK+ KSRLAAYFA+GTSVV
Sbjct: 148  LTQLQWHACKLTTTSSGCQKTHPVPVHRLGRGTSGILLCAKTKLCKSRLAAYFAEGTSVV 207

Query: 809  GVSRHTNSELKTMRKITKIYRALASGVINEDEVVVEQPIGQIRYPGVAKGLYVASPSGKP 630
               + TNSE  TMRKI KIYRAL SGV++ DE V++QPIG I+YPGVAKGLYVASPSGKP
Sbjct: 208  E-EKCTNSECNTMRKICKIYRALVSGVMDMDEAVIKQPIGTIKYPGVAKGLYVASPSGKP 266

Query: 629  SFSRVGVLERNIHSNCTLVQVEIQSGRPHQIRIHLSFIGHPLIGDPLYVAGGQPKCFDPE 450
            + S V VLER+  SNCTLVQVEIQSGRPHQIRIHLSFIG+PLIGDPLYV+GGQPKCF PE
Sbjct: 267  ALSSVRVLERDSESNCTLVQVEIQSGRPHQIRIHLSFIGYPLIGDPLYVSGGQPKCFHPE 326

Query: 449  VMDESFVHDGGYQRPEKPVPGDCGYHLHAHRSVFPHPITDEVIDITASLPYILQTQEESK 270
            ++DESF  DGGYQRPE PVPGDCGY+LHAH+    HPIT+E+I ITA LP ILQT++E +
Sbjct: 327  LLDESFEKDGGYQRPENPVPGDCGYNLHAHQIGLIHPITNELIKITAPLPAILQTRDERE 386

Query: 269  A 267
            A
Sbjct: 387  A 387


>ref|XP_004233537.1| PREDICTED: RNA pseudouridine synthase 5 isoform X1 [Solanum
            lycopersicum]
          Length = 402

 Score =  545 bits (1404), Expect = e-152
 Identities = 268/361 (74%), Positives = 307/361 (85%), Gaps = 1/361 (0%)
 Frame = -3

Query: 1346 FGEPWPELNDGLNYRDLLRSSDAGLKLIEFYSKKYKNSAPLLGWLQRIHNKQITIDGDAV 1167
            FG PWP+ N+GL+Y D++R +DAGL LIEFY +KYKNSAPL GWLQRI NKQITIDG  V
Sbjct: 37   FGVPWPQRNEGLSYHDIVRPTDAGLTLIEFYFRKYKNSAPLQGWLQRIQNKQITIDGKVV 96

Query: 1166 TKPDTILREGMELIYYRLPWKEPDAPYLLEILYEDDDVIALNKPSGLQVLPGGLFQQRTV 987
              PDT LR G EL+Y+RLPW+EPDAPYLLE+L+EDD +I +NKPSGLQVLPGGL+QQRTV
Sbjct: 97   ILPDTELRAGAELVYHRLPWREPDAPYLLEVLFEDDYLIVVNKPSGLQVLPGGLYQQRTV 156

Query: 986  LTQLQWRSLK-RTSSSAFQEPPPVPVHRLGRGTSGILLCAKTKVAKSRLAAYFADGTSVV 810
            LTQLQW + K  T+SS  Q+  PVPVHRLGRGTSGILLCAKTK+ KSRLAAYFA+GTSVV
Sbjct: 157  LTQLQWHACKLTTTSSGCQKTHPVPVHRLGRGTSGILLCAKTKLCKSRLAAYFAEGTSVV 216

Query: 809  GVSRHTNSELKTMRKITKIYRALASGVINEDEVVVEQPIGQIRYPGVAKGLYVASPSGKP 630
               + TNSE  TMRKI KIYRAL SGV++ DE V++QPIG I+YPGVAKGLYVASPSGKP
Sbjct: 217  E-EKCTNSECNTMRKICKIYRALVSGVMDMDEAVIKQPIGTIKYPGVAKGLYVASPSGKP 275

Query: 629  SFSRVGVLERNIHSNCTLVQVEIQSGRPHQIRIHLSFIGHPLIGDPLYVAGGQPKCFDPE 450
            + S V VLER+  SNCTLVQVEIQSGRPHQIRIHLSFIG+PLIGDPLYV+GGQPKCF PE
Sbjct: 276  ALSSVRVLERDSESNCTLVQVEIQSGRPHQIRIHLSFIGYPLIGDPLYVSGGQPKCFHPE 335

Query: 449  VMDESFVHDGGYQRPEKPVPGDCGYHLHAHRSVFPHPITDEVIDITASLPYILQTQEESK 270
            ++DESF  DGGYQRPE PVPGDCGY+LHAH+    HPIT+E+I ITA LP ILQT++E +
Sbjct: 336  LLDESFEKDGGYQRPENPVPGDCGYNLHAHQIGLIHPITNELIKITAPLPAILQTRDERE 395

Query: 269  A 267
            A
Sbjct: 396  A 396


>ref|XP_010658419.1| PREDICTED: RNA pseudouridine synthase 5 isoform X1 [Vitis vinifera]
          Length = 393

 Score =  540 bits (1392), Expect = e-151
 Identities = 256/365 (70%), Positives = 309/365 (84%)
 Frame = -3

Query: 1352 QSFGEPWPELNDGLNYRDLLRSSDAGLKLIEFYSKKYKNSAPLLGWLQRIHNKQITIDGD 1173
            ++FG PWP+ NDGL Y D++ +SD+ L LI++YS K+KNSAPL GWLQRI+  QIT+DG 
Sbjct: 3    KTFGVPWPDFNDGLTYNDVVSASDSELTLIDYYSSKHKNSAPLQGWLQRINKGQITVDGT 62

Query: 1172 AVTKPDTILREGMELIYYRLPWKEPDAPYLLEILYEDDDVIALNKPSGLQVLPGGLFQQR 993
             VT+P TILR G +L+Y+RLPW+EPDAPYLLEILYEDDDVIALNKPSGLQVLPGGLFQQR
Sbjct: 63   VVTEPKTILRAGSKLVYHRLPWQEPDAPYLLEILYEDDDVIALNKPSGLQVLPGGLFQQR 122

Query: 992  TVLTQLQWRSLKRTSSSAFQEPPPVPVHRLGRGTSGILLCAKTKVAKSRLAAYFADGTSV 813
            TVLTQLQWR+ K+ S  A QE   VPVHRLGRGTSGILLCAKTK+AK+RLAAYFADGTSV
Sbjct: 123  TVLTQLQWRANKQNSLPACQESHSVPVHRLGRGTSGILLCAKTKLAKTRLAAYFADGTSV 182

Query: 812  VGVSRHTNSELKTMRKITKIYRALASGVINEDEVVVEQPIGQIRYPGVAKGLYVASPSGK 633
            VG +R  + + +TMRKI+KIYRAL +G++++DE+V+EQPIG ++YPGVAKGLYVASPSGK
Sbjct: 183  VGGNRDADMKSRTMRKISKIYRALVNGILDKDEIVIEQPIGMVQYPGVAKGLYVASPSGK 242

Query: 632  PSFSRVGVLERNIHSNCTLVQVEIQSGRPHQIRIHLSFIGHPLIGDPLYVAGGQPKCFDP 453
            P+ S+V +LER++  +  +VQVEIQSGRPHQIRIHLSFIGHPL+GDPLYV GGQPKC D 
Sbjct: 243  PALSKVSILERDVQGDHMIVQVEIQSGRPHQIRIHLSFIGHPLLGDPLYVPGGQPKCCDA 302

Query: 452  EVMDESFVHDGGYQRPEKPVPGDCGYHLHAHRSVFPHPITDEVIDITASLPYILQTQEES 273
            E  +ES+  DGGYQRP KPVPGDCGYHLHAH+ V  HP T+EVI ITA LP +L+T+ E 
Sbjct: 303  EFTNESYALDGGYQRPVKPVPGDCGYHLHAHQLVLSHPTTNEVIKITAPLPPVLRTRGEE 362

Query: 272  KAIKQ 258
            + + +
Sbjct: 363  EELTE 367


>ref|XP_006346975.1| PREDICTED: RNA pseudouridine synthase 5-like isoform X1 [Solanum
            tuberosum] gi|565360441|ref|XP_006346976.1| PREDICTED:
            RNA pseudouridine synthase 5-like isoform X2 [Solanum
            tuberosum]
          Length = 379

 Score =  540 bits (1392), Expect = e-151
 Identities = 270/366 (73%), Positives = 307/366 (83%), Gaps = 6/366 (1%)
 Frame = -3

Query: 1346 FGEPWPELNDGLNYRDLLRSSDAGLKLIEFYSKKYKNSAPLLGWLQRIHNKQITIDGDAV 1167
            FG  WPELN+GL Y D++R +DAGL LIEFY +KYKNSAPL GWLQRI NKQITIDG  V
Sbjct: 14   FGVSWPELNEGLTYHDIVRPTDAGLMLIEFYFRKYKNSAPLQGWLQRIQNKQITIDGKVV 73

Query: 1166 TKPDTIL-----REGMELIYYRLPWKEPDAPYLLEILYEDDDVIALNKPSGLQVLPGGLF 1002
              PDT L     R G EL+Y+RLPW+EPDAPYLLE+L++DD +I +NKPSGLQVLPGGL+
Sbjct: 74   ILPDTELSFWMCRAGAELVYHRLPWREPDAPYLLEVLFQDDYLIVVNKPSGLQVLPGGLY 133

Query: 1001 QQRTVLTQLQWRSLK-RTSSSAFQEPPPVPVHRLGRGTSGILLCAKTKVAKSRLAAYFAD 825
            QQRTVLTQLQW + K  T+SS  Q+  PVPVHRLGRGTSGILLCAKTK+ KSRLAAYFA+
Sbjct: 134  QQRTVLTQLQWHACKPTTTSSGCQKTHPVPVHRLGRGTSGILLCAKTKLCKSRLAAYFAE 193

Query: 824  GTSVVGVSRHTNSELKTMRKITKIYRALASGVINEDEVVVEQPIGQIRYPGVAKGLYVAS 645
            GTSVV   + TNSE  TMRKI KIYRAL SGV++ DEVV++QPIG I+YPGVAKGLYVAS
Sbjct: 194  GTSVVE-DKCTNSECNTMRKICKIYRALVSGVMDMDEVVIKQPIGTIKYPGVAKGLYVAS 252

Query: 644  PSGKPSFSRVGVLERNIHSNCTLVQVEIQSGRPHQIRIHLSFIGHPLIGDPLYVAGGQPK 465
            PSGKP+ S V VLER+  +NCTLVQVEIQSGRPHQIRIHLSFIG+PLIGDPLYV+GGQPK
Sbjct: 253  PSGKPALSSVRVLERDSENNCTLVQVEIQSGRPHQIRIHLSFIGYPLIGDPLYVSGGQPK 312

Query: 464  CFDPEVMDESFVHDGGYQRPEKPVPGDCGYHLHAHRSVFPHPITDEVIDITASLPYILQT 285
            CF PE+MDESF  DGGYQRPE PVPGDCGY+LHAH+    HPIT+E+I ITA LP ILQT
Sbjct: 313  CFHPELMDESFEKDGGYQRPENPVPGDCGYNLHAHQIGLIHPITNELIKITAPLPAILQT 372

Query: 284  QEESKA 267
            +EE +A
Sbjct: 373  REEREA 378


>ref|XP_011031774.1| PREDICTED: RNA pseudouridine synthase 5 isoform X2 [Populus
            euphratica]
          Length = 378

 Score =  540 bits (1391), Expect = e-150
 Identities = 261/365 (71%), Positives = 306/365 (83%), Gaps = 3/365 (0%)
 Frame = -3

Query: 1349 SFGEPWPELNDGLNYRDLLR-SSDAGLKLIEFYSKKYKNSAPLLGWLQRIHNKQITIDGD 1173
            SFG PWP+LNDGL Y D++  SSD+GL LI FYS KYKNSAPL GWLQRIHN QITIDG+
Sbjct: 13   SFGSPWPDLNDGLFYNDVVSTSSDSGLTLIHFYSSKYKNSAPLQGWLQRIHNGQITIDGE 72

Query: 1172 AVTKPDTILREGMELIYYRLPWKEPDAPYLLEILYEDDDVIALNKPSGLQVLPGGLFQQR 993
             V +P  ILR+GMEL+Y+RLPW+EPDAPYLL++LYEDDD+IALNKP GLQVLPGGLFQQR
Sbjct: 73   VVKEPKAILRDGMELVYHRLPWREPDAPYLLQVLYEDDDMIALNKPPGLQVLPGGLFQQR 132

Query: 992  TVLTQLQWRSLKRTSSSAFQEPPPVPVHRLGRGTSGILLCAKTKVAKSRLAAYFADGTSV 813
            TVL QLQWR+ K +SS A Q   PVPVHRLGRGTSGILLCAKTKVAK+ LAAYFADGTS+
Sbjct: 133  TVLMQLQWRASKGSSSLAIQGSHPVPVHRLGRGTSGILLCAKTKVAKTSLAAYFADGTSL 192

Query: 812  VGVSRHTNSELKTMRKITKIYRALASGVINEDEVVVEQPIGQIRYPGVAKGLYVASPSGK 633
            +G S + N E    RKI+K+YRAL +G++N+D+++++QPIG +RYPGVAKGLYVASPSGK
Sbjct: 193  IGDSSNANMEKSKTRKISKVYRALVNGILNQDKIIIKQPIGTMRYPGVAKGLYVASPSGK 252

Query: 632  PSFSRVGVLERNIHSNCTLVQVEIQSGRPHQIRIHLSFIGHPLIGDPLYVAGGQPKCFDP 453
            P+ S+V VLER+   N TLVQVEI+SGRPHQIRIHLSFIGHPL+GDPLY  GGQP+CFD 
Sbjct: 253  PALSKVEVLERDSQLNQTLVQVEIESGRPHQIRIHLSFIGHPLLGDPLYDVGGQPRCFDS 312

Query: 452  EVMDESFVHDGGYQRPEKPVPGDCGYHLHAHRSVF--PHPITDEVIDITASLPYILQTQE 279
            E  DESF  DGGY+RP KPVPGDCGY+LHAH+ V   PHP  +EVI ITA LP IL+TQ 
Sbjct: 313  EHEDESFAEDGGYERPAKPVPGDCGYYLHAHQLVLSHPHPSKNEVIKITAPLPSILRTQA 372

Query: 278  ESKAI 264
            E++ +
Sbjct: 373  ETEEL 377


>ref|XP_008233344.1| PREDICTED: RNA pseudouridine synthase 5 isoform X1 [Prunus mume]
          Length = 393

 Score =  538 bits (1387), Expect = e-150
 Identities = 256/363 (70%), Positives = 307/363 (84%)
 Frame = -3

Query: 1352 QSFGEPWPELNDGLNYRDLLRSSDAGLKLIEFYSKKYKNSAPLLGWLQRIHNKQITIDGD 1173
            Q+FG PWP+LN GL Y D++R+SD+ L LIEFYS KYKNSAPL GWLQRI N QIT+DG+
Sbjct: 11   QTFGLPWPDLNHGLLYNDVVRASDSELTLIEFYSSKYKNSAPLQGWLQRIRNGQITVDGE 70

Query: 1172 AVTKPDTILREGMELIYYRLPWKEPDAPYLLEILYEDDDVIALNKPSGLQVLPGGLFQQR 993
             V  P TILR G+EL+Y+RLPW+EPDAPYLLE+LYEDDD+IALNKPSGLQVLPGGLFQQR
Sbjct: 71   VVKDPSTILRVGLELVYHRLPWREPDAPYLLEVLYEDDDMIALNKPSGLQVLPGGLFQQR 130

Query: 992  TVLTQLQWRSLKRTSSSAFQEPPPVPVHRLGRGTSGILLCAKTKVAKSRLAAYFADGTSV 813
            TVLTQL W++ K+ S  + QEP PVPVHRLGRGTSGILLCAKTK AK++LAAYFADGTS 
Sbjct: 131  TVLTQLLWQATKKISPLSCQEPHPVPVHRLGRGTSGILLCAKTKHAKTQLAAYFADGTSN 190

Query: 812  VGVSRHTNSELKTMRKITKIYRALASGVINEDEVVVEQPIGQIRYPGVAKGLYVASPSGK 633
            +G   +T+ E   +RKI+KIYRAL +G++ ED+V+V+QPIG +RYPGVAKGLYVAS +GK
Sbjct: 191  IGDDSNTSMEAHAVRKISKIYRALVTGILCEDKVIVKQPIGVVRYPGVAKGLYVASATGK 250

Query: 632  PSFSRVGVLERNIHSNCTLVQVEIQSGRPHQIRIHLSFIGHPLIGDPLYVAGGQPKCFDP 453
            P+ S+V VLER IH N TLVQVEIQSGRPHQIRIHLS+IGHPL+GDPLYV GGQPKC D 
Sbjct: 251  PALSKVEVLEREIHKNRTLVQVEIQSGRPHQIRIHLSYIGHPLLGDPLYVLGGQPKCLDS 310

Query: 452  EVMDESFVHDGGYQRPEKPVPGDCGYHLHAHRSVFPHPITDEVIDITASLPYILQTQEES 273
            + +DESF  DGG+ RP KPVPGDCGY+LHAH+ +  HP ++EVI +TA LP IL+TQ+E+
Sbjct: 311  DFVDESFAVDGGFLRPTKPVPGDCGYNLHAHQVILSHPSSNEVIKVTAPLPAILRTQQET 370

Query: 272  KAI 264
            + +
Sbjct: 371  EEL 373


>ref|XP_004307403.1| PREDICTED: RNA pseudouridine synthase 5 [Fragaria vesca subsp. vesca]
          Length = 375

 Score =  536 bits (1382), Expect = e-149
 Identities = 258/368 (70%), Positives = 308/368 (83%)
 Frame = -3

Query: 1361 LIMQSFGEPWPELNDGLNYRDLLRSSDAGLKLIEFYSKKYKNSAPLLGWLQRIHNKQITI 1182
            L  Q+FG PWP+LNDGL+Y D+++SSD+ L LIEFYS KYK+SAPL GWLQRI N QIT+
Sbjct: 8    LSTQTFGLPWPDLNDGLSYNDVVKSSDSELTLIEFYSSKYKSSAPLQGWLQRIRNGQITV 67

Query: 1181 DGDAVTKPDTILREGMELIYYRLPWKEPDAPYLLEILYEDDDVIALNKPSGLQVLPGGLF 1002
            DG+ V   DTILR G EL+Y+RLPW EPDAPYLLE+LYEDDD+IALNKP GLQVLPGGLF
Sbjct: 68   DGEVVRDSDTILRVGSELVYHRLPWGEPDAPYLLEVLYEDDDMIALNKPGGLQVLPGGLF 127

Query: 1001 QQRTVLTQLQWRSLKRTSSSAFQEPPPVPVHRLGRGTSGILLCAKTKVAKSRLAAYFADG 822
            QQRTVLTQL WR  ++    A Q+   VPVHRLGRGTSGILLCAKTK AK++LAAYFADG
Sbjct: 128  QQRTVLTQLLWRESQKFDHLACQKSHLVPVHRLGRGTSGILLCAKTKHAKTQLAAYFADG 187

Query: 821  TSVVGVSRHTNSELKTMRKITKIYRALASGVINEDEVVVEQPIGQIRYPGVAKGLYVASP 642
            TS +G    TN++L T RKITKIYRAL +G+I EDEV+V+QPIG +RYPGVAKGLY+ASP
Sbjct: 188  TSHIGDDSTTNTKLHTTRKITKIYRALVTGIICEDEVIVKQPIGTVRYPGVAKGLYIASP 247

Query: 641  SGKPSFSRVGVLERNIHSNCTLVQVEIQSGRPHQIRIHLSFIGHPLIGDPLYVAGGQPKC 462
            +GKP+ S+V VL+R+I  N T+VQVEIQSGRPHQIRIHLSFIGHPL+GDPLYVAGGQPKC
Sbjct: 248  AGKPALSKVEVLDRDIQKNHTIVQVEIQSGRPHQIRIHLSFIGHPLLGDPLYVAGGQPKC 307

Query: 461  FDPEVMDESFVHDGGYQRPEKPVPGDCGYHLHAHRSVFPHPITDEVIDITASLPYILQTQ 282
               +++DESF  DGG++RP KPVPGDCGY+LHAH+ V  HP ++EVI ITA LP +L+T+
Sbjct: 308  LGSDLVDESFADDGGFKRPTKPVPGDCGYNLHAHQVVLSHPSSNEVIKITAPLPLVLRTR 367

Query: 281  EESKAIKQ 258
            EE + ++Q
Sbjct: 368  EEIEELRQ 375


>ref|XP_011031773.1| PREDICTED: RNA pseudouridine synthase 5 isoform X1 [Populus
            euphratica]
          Length = 379

 Score =  536 bits (1380), Expect = e-149
 Identities = 259/366 (70%), Positives = 305/366 (83%), Gaps = 4/366 (1%)
 Frame = -3

Query: 1349 SFGEPWPELNDGLNYRDLLR-SSDAGLKLIEFYSKKYKNSAPLLGWLQRIHNKQITIDGD 1173
            SFG PWP+LNDGL Y D++  SSD+GL LI FYS KYKNSAPL GWLQRIHN QITIDG+
Sbjct: 13   SFGSPWPDLNDGLFYNDVVSTSSDSGLTLIHFYSSKYKNSAPLQGWLQRIHNGQITIDGE 72

Query: 1172 AVTKPDTILREGMELIYYRLPWKEPDAPYLLEILYEDDDVIALNKPSGLQVLPGGLFQQR 993
             V +P  ILR+GMEL+Y+RLPW+EPDAPYLL++LYEDDD+IALNKP GLQVLPGGLFQQR
Sbjct: 73   VVKEPKAILRDGMELVYHRLPWREPDAPYLLQVLYEDDDMIALNKPPGLQVLPGGLFQQR 132

Query: 992  TVLTQLQWRSLKRTSSSAFQEPPPVPVHRLGRGTSGILLCAKTKVAKSRLAAYFADGTSV 813
            TVL QLQWR+ K +SS A Q   PVPVHRLGRGTSGILLCAKTKVAK+ LAAYFADGTS+
Sbjct: 133  TVLMQLQWRASKGSSSLAIQGSHPVPVHRLGRGTSGILLCAKTKVAKTSLAAYFADGTSL 192

Query: 812  VGVSRHTNSELKTMRKITKIYRALASGVINEDEVVVEQPIGQIRYPGVAKGLYVASPSGK 633
            +G S + N E    RKI+K+YRAL +G++N+D+++++QPIG +RYPGVAKGLYVASPSGK
Sbjct: 193  IGDSSNANMEKSKTRKISKVYRALVNGILNQDKIIIKQPIGTMRYPGVAKGLYVASPSGK 252

Query: 632  PSFSRVGVLERNIHSNCTLVQVEIQSGRPHQIRIHLSFIGHPLIGDPLYVAGGQPKCFDP 453
            P+ S+V VLER+   N TLVQVEI+SGRPHQIRIHLSFIGHPL+GDPLY  GGQP+CFD 
Sbjct: 253  PALSKVEVLERDSQLNQTLVQVEIESGRPHQIRIHLSFIGHPLLGDPLYDVGGQPRCFDS 312

Query: 452  EVMDESFVHDGGYQRPEKPVPGDCGYHLHAHRSVFPHP---ITDEVIDITASLPYILQTQ 282
            E  DESF  DGGY+RP KPVPGDCGY+LHAH+ V  HP     ++VI ITA LP IL+TQ
Sbjct: 313  EHEDESFAEDGGYERPAKPVPGDCGYYLHAHQLVLSHPHPSKNEQVIKITAPLPSILRTQ 372

Query: 281  EESKAI 264
             E++ +
Sbjct: 373  AETEEL 378


>ref|XP_009589057.1| PREDICTED: RNA pseudouridine synthase 5 isoform X2 [Nicotiana
            tomentosiformis]
          Length = 436

 Score =  535 bits (1379), Expect = e-149
 Identities = 263/341 (77%), Positives = 296/341 (86%), Gaps = 1/341 (0%)
 Frame = -3

Query: 1346 FGEPWPELNDGLNYRDLLRSSDAGLKLIEFYSKKYKNSAPLLGWLQRIHNKQITIDGDAV 1167
            FGEPWPE NDGL Y D++R  DAGL LIEFYS+KYK+SAPL GWLQRI NKQIT+D   V
Sbjct: 16   FGEPWPEFNDGLTYHDMVRPIDAGLTLIEFYSRKYKSSAPLQGWLQRIQNKQITVDSKVV 75

Query: 1166 TKPDTILREGMELIYYRLPWKEPDAPYLLEILYEDDDVIALNKPSGLQVLPGGLFQQRTV 987
            T PDT LR G EL+Y+RLPW+EPDAPYLL++L+EDD +IALNKPSGLQVLPGGLFQQRTV
Sbjct: 76   TIPDTELRAGTELVYHRLPWREPDAPYLLQVLFEDDYLIALNKPSGLQVLPGGLFQQRTV 135

Query: 986  LTQLQWRSLK-RTSSSAFQEPPPVPVHRLGRGTSGILLCAKTKVAKSRLAAYFADGTSVV 810
            LTQLQW   K  TSSS  ++  PVPVHRLGRGTSGILLCAKTK+AKSRLAAYFA+GTSVV
Sbjct: 136  LTQLQWHVSKLTTSSSGCRKTHPVPVHRLGRGTSGILLCAKTKLAKSRLAAYFAEGTSVV 195

Query: 809  GVSRHTNSELKTMRKITKIYRALASGVINEDEVVVEQPIGQIRYPGVAKGLYVASPSGKP 630
               ++TNSE K MRKI+KIYRAL SGVI+ DEV+++QPIG I+YPGVAKGLYVASPSGKP
Sbjct: 196  E-DKYTNSECKKMRKISKIYRALVSGVIDMDEVLIKQPIGTIKYPGVAKGLYVASPSGKP 254

Query: 629  SFSRVGVLERNIHSNCTLVQVEIQSGRPHQIRIHLSFIGHPLIGDPLYVAGGQPKCFDPE 450
            + S V VLER++ +N TLVQVEIQSGRPHQIRIHLSFIG PLIGDPLYV+GGQPKCFDPE
Sbjct: 255  ALSSVHVLERDLENNSTLVQVEIQSGRPHQIRIHLSFIGLPLIGDPLYVSGGQPKCFDPE 314

Query: 449  VMDESFVHDGGYQRPEKPVPGDCGYHLHAHRSVFPHPITDE 327
            +MDESF  DGGYQRPE PVPGDCGY+LHAH+ V  HPIT+E
Sbjct: 315  LMDESFEKDGGYQRPENPVPGDCGYNLHAHQIVLIHPITNE 355


>ref|XP_002312025.1| hypothetical protein POPTR_0008s04160g [Populus trichocarpa]
            gi|222851845|gb|EEE89392.1| hypothetical protein
            POPTR_0008s04160g [Populus trichocarpa]
          Length = 377

 Score =  535 bits (1378), Expect = e-149
 Identities = 259/364 (71%), Positives = 304/364 (83%), Gaps = 2/364 (0%)
 Frame = -3

Query: 1349 SFGEPWPELNDGLNYRDLLR-SSDAGLKLIEFYSKKYKNSAPLLGWLQRIHNKQITIDGD 1173
            SFG PWP+LN+GL Y D++  SSD+GL LI FYS KYKNSAPL GWLQRIHN QITIDG+
Sbjct: 13   SFGSPWPDLNEGLFYNDVVSTSSDSGLTLIHFYSSKYKNSAPLQGWLQRIHNGQITIDGE 72

Query: 1172 AVTKPDTILREGMELIYYRLPWKEPDAPYLLEILYEDDDVIALNKPSGLQVLPGGLFQQR 993
             V +P  ILR+GMEL+Y+RLPW+EPDAPYLL++LYEDDD++ALNKP GLQVLPGGLFQQR
Sbjct: 73   VVKEPKAILRDGMELVYHRLPWREPDAPYLLQVLYEDDDMVALNKPPGLQVLPGGLFQQR 132

Query: 992  TVLTQLQWRSLKRTSSSAFQEPPPVPVHRLGRGTSGILLCAKTKVAKSRLAAYFADGTSV 813
            TVL QLQWR+ K +SS A Q   PVPVHRLGRGTSGILLCAKTKVAK+ LAAYFADGTS+
Sbjct: 133  TVLMQLQWRASKGSSSLAIQGSHPVPVHRLGRGTSGILLCAKTKVAKTSLAAYFADGTSL 192

Query: 812  VGVSRHTNSELKTMRKITKIYRALASGVINEDEVVVEQPIGQIRYPGVAKGLYVASPSGK 633
            +G S + N E    RKI+KIYRAL +G++N+D+++++QPIG +RYPGVAKGLYVASPSGK
Sbjct: 193  IGDSSNANMEQSKRRKISKIYRALVNGILNQDKIIIKQPIGTMRYPGVAKGLYVASPSGK 252

Query: 632  PSFSRVGVLERNIHSNCTLVQVEIQSGRPHQIRIHLSFIGHPLIGDPLYVAGGQPKCFDP 453
            P+ S+V VLER+   N TLVQVEI+SGRPHQIRIHLSFIGHPL+GDPLY  GGQP CFD 
Sbjct: 253  PALSKVEVLERDSQLNQTLVQVEIESGRPHQIRIHLSFIGHPLLGDPLYDVGGQPMCFDS 312

Query: 452  EVMDESFVHDGGYQRPEKPVPGDCGYHLHAHRSVFPHPITDE-VIDITASLPYILQTQEE 276
            E  DESF  DGGY+RP KPVPGDCGY+LHAH+ V  HP  +E VI ITA LP IL+TQ E
Sbjct: 313  EHEDESFAEDGGYERPAKPVPGDCGYYLHAHQLVLSHPTKNEQVIKITAPLPSILRTQAE 372

Query: 275  SKAI 264
            ++ +
Sbjct: 373  TEEL 376


>ref|XP_007009784.1| Pseudouridine synthase family protein [Theobroma cacao]
            gi|508726697|gb|EOY18594.1| Pseudouridine synthase family
            protein [Theobroma cacao]
          Length = 378

 Score =  533 bits (1372), Expect = e-148
 Identities = 253/363 (69%), Positives = 301/363 (82%)
 Frame = -3

Query: 1346 FGEPWPELNDGLNYRDLLRSSDAGLKLIEFYSKKYKNSAPLLGWLQRIHNKQITIDGDAV 1167
            FG PWPELNDGL Y D+++ SD+ L LIEFYS KYKNSAP  GWLQRI N QI++DG  V
Sbjct: 12   FGLPWPELNDGLFYDDVIKPSDSELTLIEFYSSKYKNSAPSQGWLQRIQNGQISVDGRVV 71

Query: 1166 TKPDTILREGMELIYYRLPWKEPDAPYLLEILYEDDDVIALNKPSGLQVLPGGLFQQRTV 987
              P+TILR   EL+Y+RLPWKEPDAP+ LE+LYEDDD+IALNKPSGLQVLPGGLFQQRTV
Sbjct: 72   RDPNTILRGSSELVYHRLPWKEPDAPHALEVLYEDDDMIALNKPSGLQVLPGGLFQQRTV 131

Query: 986  LTQLQWRSLKRTSSSAFQEPPPVPVHRLGRGTSGILLCAKTKVAKSRLAAYFADGTSVVG 807
            LTQL WR  K+TSS A QE  PVPVHRLGRGTSGILLCAKTK AK+ LAAYFADGTS++G
Sbjct: 132  LTQLSWRMRKQTSSLASQESHPVPVHRLGRGTSGILLCAKTKAAKTCLAAYFADGTSLIG 191

Query: 806  VSRHTNSELKTMRKITKIYRALASGVINEDEVVVEQPIGQIRYPGVAKGLYVASPSGKPS 627
             + +   +    RKI+KIYRAL +G++ ED+VV+ QPIG ++YPGVAKGLYVASPSGKP+
Sbjct: 192  ANSNRKMQPSCTRKISKIYRALVTGILGEDKVVINQPIGIVQYPGVAKGLYVASPSGKPA 251

Query: 626  FSRVGVLERNIHSNCTLVQVEIQSGRPHQIRIHLSFIGHPLIGDPLYVAGGQPKCFDPEV 447
             S+V VLE++   N TLVQV+I+SGRPHQIRIHLSFIGHPL+GDPLY+AGGQP+CFD E 
Sbjct: 252  LSKVEVLEKDEQQNHTLVQVQIESGRPHQIRIHLSFIGHPLLGDPLYIAGGQPRCFDSEF 311

Query: 446  MDESFVHDGGYQRPEKPVPGDCGYHLHAHRSVFPHPITDEVIDITASLPYILQTQEESKA 267
            +DE++  DGGYQRP  PVPGDCGY+LHAHR +  HP TDE+I+ITA LP +LQTQ+E + 
Sbjct: 312  VDENYAQDGGYQRPVNPVPGDCGYYLHAHRLLLSHPTTDEIINITAPLPPVLQTQDEVRR 371

Query: 266  IKQ 258
             ++
Sbjct: 372  SRE 374


>ref|XP_009589063.1| PREDICTED: RNA pseudouridine synthase 5 isoform X7 [Nicotiana
            tomentosiformis]
          Length = 367

 Score =  531 bits (1369), Expect = e-148
 Identities = 263/349 (75%), Positives = 299/349 (85%), Gaps = 6/349 (1%)
 Frame = -3

Query: 1346 FGEPWPELNDGLNYRDLLRSSDAGLKLIEFYSKKYKNSAPLLGWLQRIHNKQITIDGDAV 1167
            FGEPWPE NDGL Y D++R  DAGL LIEFYS+KYK+SAPL GWLQRI NKQIT+D   V
Sbjct: 16   FGEPWPEFNDGLTYHDMVRPIDAGLTLIEFYSRKYKSSAPLQGWLQRIQNKQITVDSKVV 75

Query: 1166 TKPDTIL-----REGMELIYYRLPWKEPDAPYLLEILYEDDDVIALNKPSGLQVLPGGLF 1002
            T PDT L     R G EL+Y+RLPW+EPDAPYLL++L+EDD +IALNKPSGLQVLPGGLF
Sbjct: 76   TIPDTELSFWMSRAGTELVYHRLPWREPDAPYLLQVLFEDDYLIALNKPSGLQVLPGGLF 135

Query: 1001 QQRTVLTQLQWRSLK-RTSSSAFQEPPPVPVHRLGRGTSGILLCAKTKVAKSRLAAYFAD 825
            QQRTVLTQLQW   K  TSSS  ++  PVPVHRLGRGTSGILLCAKTK+AKSRLAAYFA+
Sbjct: 136  QQRTVLTQLQWHVSKLTTSSSGCRKTHPVPVHRLGRGTSGILLCAKTKLAKSRLAAYFAE 195

Query: 824  GTSVVGVSRHTNSELKTMRKITKIYRALASGVINEDEVVVEQPIGQIRYPGVAKGLYVAS 645
            GTSVV   ++TNSE K MRKI+KIYRAL SGVI+ DEV+++QPIG I+YPGVAKGLYVAS
Sbjct: 196  GTSVVE-DKYTNSECKKMRKISKIYRALVSGVIDMDEVLIKQPIGTIKYPGVAKGLYVAS 254

Query: 644  PSGKPSFSRVGVLERNIHSNCTLVQVEIQSGRPHQIRIHLSFIGHPLIGDPLYVAGGQPK 465
            PSGKP+ S V VLER++ +N TLVQVEIQSGRPHQIRIHLSFIG PLIGDPLYV+GGQPK
Sbjct: 255  PSGKPALSSVHVLERDLENNSTLVQVEIQSGRPHQIRIHLSFIGLPLIGDPLYVSGGQPK 314

Query: 464  CFDPEVMDESFVHDGGYQRPEKPVPGDCGYHLHAHRSVFPHPITDEVID 318
            CFDPE+MDESF  DGGYQRPE PVPGDCGY+LHAH+ V  HPIT+E+++
Sbjct: 315  CFDPELMDESFEKDGGYQRPENPVPGDCGYNLHAHQIVLIHPITNEILN 363