BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Forsythia21_contig00014429
         (1327 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011080766.1| PREDICTED: RNA-directed DNA methylation 4 [S...   389   e-105
ref|XP_009768480.1| PREDICTED: RNA-directed DNA methylation 4 is...   343   2e-91
ref|XP_009768479.1| PREDICTED: RNA-directed DNA methylation 4 is...   342   5e-91
ref|XP_009621890.1| PREDICTED: RNA-directed DNA methylation 4 is...   342   5e-91
ref|XP_009621889.1| PREDICTED: RNA-directed DNA methylation 4 is...   339   2e-90
emb|CDP04072.1| unnamed protein product [Coffea canephora]            337   9e-90
ref|XP_009768481.1| PREDICTED: RNA-directed DNA methylation 4 is...   335   4e-89
ref|XP_009621891.1| PREDICTED: RNA-directed DNA methylation 4 is...   333   2e-88
ref|XP_006350874.1| PREDICTED: RNA-directed DNA methylation 4-li...   331   7e-88
ref|XP_006350873.1| PREDICTED: RNA-directed DNA methylation 4-li...   331   9e-88
ref|XP_004242490.1| PREDICTED: RNA-directed DNA methylation 4 [S...   323   2e-85
ref|XP_010650841.1| PREDICTED: RNA-directed DNA methylation 4 is...   315   4e-83
emb|CBI15854.3| unnamed protein product [Vitis vinifera]              315   4e-83
ref|XP_010650840.1| PREDICTED: RNA-directed DNA methylation 4 is...   312   3e-82
ref|XP_010256965.1| PREDICTED: RNA-directed DNA methylation 4 is...   300   1e-78
ref|XP_002520100.1| conserved hypothetical protein [Ricinus comm...   292   5e-76
ref|XP_012839144.1| PREDICTED: RNA-directed DNA methylation 4 is...   289   3e-75
ref|XP_006431976.1| hypothetical protein CICLE_v10001595mg [Citr...   287   1e-74
ref|XP_008230242.1| PREDICTED: RNA-directed DNA methylation 4 is...   286   2e-74
ref|XP_006468138.1| PREDICTED: RNA-directed DNA methylation 4-li...   286   2e-74

>ref|XP_011080766.1| PREDICTED: RNA-directed DNA methylation 4 [Sesamum indicum]
          Length = 371

 Score =  389 bits (998), Expect = e-105
 Identities = 214/351 (60%), Positives = 248/351 (70%), Gaps = 6/351 (1%)
 Frame = -3

Query: 1241 MDDSTAIPAKTDKPVIVRVKRKASQSLLDAFWLEINERPIKRPLLDFEKLXXXXXXXSRV 1062
            M +S++     DKPVIVRVKRKA QS +DAFWLEI ERP+KRPLLDF KL       SRV
Sbjct: 1    MAESSSSAPSIDKPVIVRVKRKAFQSAIDAFWLEILERPLKRPLLDFGKLSISDACSSRV 60

Query: 1061 EELKTKKVLVRHVETVISSEVTVDVLRSFVPNSTDALKGR------RCTFKTENKQEQLL 900
            EELKTKK+LVRHVETV SSE T DVLRSFVPN  D LK +      R   KT  KQ+QLL
Sbjct: 61   EELKTKKILVRHVETVTSSEDTFDVLRSFVPNPYDELKSKEKNEEGRRNIKTGKKQDQLL 120

Query: 899  VKARQRQEVLSKNARFEQIWRSRKGKKEAVEDDAVYEMCRLYDXXXXXXXXXXXXXXXXX 720
            VKA+Q +EV+S+NARFEQIWRSRKGKKE  ED+A+YEMCRLYD                 
Sbjct: 121  VKAKQSREVISRNARFEQIWRSRKGKKETPEDEAIYEMCRLYDVVRVDVEELEVKVQKEK 180

Query: 719  XXXXEDHRMMAQYLPLLREVLPTAAVEIEDDIHNYASRRAFSDDYVYDFYAVKGDANITE 540
                +D RMMA YLPLL+EVLPTAA+EIE DIH+Y S++A +DDYVYDFYA K +A++ E
Sbjct: 181  DVDVDDCRMMADYLPLLKEVLPTAALEIEHDIHDYMSKQASADDYVYDFYAFKEEASVME 240

Query: 539  ADSASQFPLVQVXXXXXXXXXXXDSEYETDDSNAENNPLNEYPDEETSEDEDEVISRSSD 360
             DSA  FPLVQV           DSEY +DDSNAENNPLN+YPDEE SEDEDEV S +SD
Sbjct: 241  GDSARLFPLVQVDDDDDYYDGPDDSEYGSDDSNAENNPLNDYPDEEISEDEDEVTSTASD 300

Query: 359  EKSEVESRSSKNQSEEFESGSHTFYNEHEDTGPYDWSDNADSLLEDGMCFD 207
            +KS+VES++S +QSEE  SGS   Y   E +G    S+NAD  LED  CFD
Sbjct: 301  KKSQVESQTSGSQSEELGSGSEVSY---EHSGHCCRSNNADQFLEDDWCFD 348


>ref|XP_009768480.1| PREDICTED: RNA-directed DNA methylation 4 isoform X2 [Nicotiana
            sylvestris]
          Length = 358

 Score =  343 bits (879), Expect = 2e-91
 Identities = 192/342 (56%), Positives = 241/342 (70%), Gaps = 5/342 (1%)
 Frame = -3

Query: 1235 DSTAIPAKTDKPVIVRVKRKASQSLLDAFWLEINERPIKRPLLDFEKLXXXXXXXSRVEE 1056
            +S+++P+K DKPVIVRVKRKA QS +DAFWLEINERP+KRPLLDFEKL       SRVEE
Sbjct: 6    ESSSVPSKEDKPVIVRVKRKAFQSRVDAFWLEINERPLKRPLLDFEKL-SISDSSSRVEE 64

Query: 1055 LKTKKVLVRHVETVISSEVTVDVLRSFVPNSTDALKGR-----RCTFKTENKQEQLLVKA 891
            LK++KVLVRHVETV SS+VTVD+L+SF     D+ + +     R +F+ ENKQ+QLL KA
Sbjct: 65   LKSRKVLVRHVETVTSSKVTVDILKSFASAPVDSSEVKEKAEIRRSFRAENKQDQLLAKA 124

Query: 890  RQRQEVLSKNARFEQIWRSRKGKKEAVEDDAVYEMCRLYDXXXXXXXXXXXXXXXXXXXX 711
            +Q+QE LSKNARFEQIW+SRK K++ + D+ + EMCRLYD                    
Sbjct: 125  KQKQEDLSKNARFEQIWKSRKEKEKLMHDEELNEMCRLYD-VIRVDTEEKKHEVQEETTD 183

Query: 710  XEDHRMMAQYLPLLREVLPTAAVEIEDDIHNYASRRAFSDDYVYDFYAVKGDANITEADS 531
             EDHRMM+QYLPLLREV+P+AA EIE +IHNY +++  SD YVYD+YAVK D N T+ D 
Sbjct: 184  LEDHRMMSQYLPLLREVMPSAAEEIESEIHNYKAKQGSSDGYVYDYYAVKDDTN-TDEDI 242

Query: 530  ASQFPLVQVXXXXXXXXXXXDSEYETDDSNAENNPLNEYPDEETSEDEDEVISRSSDEKS 351
            AS FPLVQV            S+ ++DDSNAE+NP N+YPDEE SEDEDE  ++SS +KS
Sbjct: 243  ASPFPLVQVDDDDDYYDGPDYSDDDSDDSNAEHNPWNDYPDEEESEDEDEDETQSSGDKS 302

Query: 350  EVESRSSKNQSEEFESGSHTFYNEHEDTGPYDWSDNADSLLE 225
            EV S +S++Q      G  +F N  ED G  DWSD AD L++
Sbjct: 303  EVLSSTSQDQYGSETVGVISFQN--EDVGREDWSDYADPLVD 342


>ref|XP_009768479.1| PREDICTED: RNA-directed DNA methylation 4 isoform X1 [Nicotiana
            sylvestris]
          Length = 359

 Score =  342 bits (876), Expect = 5e-91
 Identities = 193/343 (56%), Positives = 242/343 (70%), Gaps = 6/343 (1%)
 Frame = -3

Query: 1235 DSTAIPAKTDKPVIVRVKRKASQSLLDAFWLEINERPIKRPLLDFEKLXXXXXXXSRVEE 1056
            +S+++P+K DKPVIVRVKRKA QS +DAFWLEINERP+KRPLLDFEKL       SRVEE
Sbjct: 6    ESSSVPSKEDKPVIVRVKRKAFQSRVDAFWLEINERPLKRPLLDFEKL-SISDSSSRVEE 64

Query: 1055 LKTKKVLVRHVETVISSEVTVDVLRSF---VPNSTDALKGR---RCTFKTENKQEQLLVK 894
            LK++KVLVRHVETV SS+VTVD+L+SF    P  +  +K +   R +F+ ENKQ+QLL K
Sbjct: 65   LKSRKVLVRHVETVTSSKVTVDILKSFAQSAPVDSSEVKEKAEIRRSFRAENKQDQLLAK 124

Query: 893  ARQRQEVLSKNARFEQIWRSRKGKKEAVEDDAVYEMCRLYDXXXXXXXXXXXXXXXXXXX 714
            A+Q+QE LSKNARFEQIW+SRK K++ + D+ + EMCRLYD                   
Sbjct: 125  AKQKQEDLSKNARFEQIWKSRKEKEKLMHDEELNEMCRLYD-VIRVDTEEKKHEVQEETT 183

Query: 713  XXEDHRMMAQYLPLLREVLPTAAVEIEDDIHNYASRRAFSDDYVYDFYAVKGDANITEAD 534
              EDHRMM+QYLPLLREV+P+AA EIE +IHNY +++  SD YVYD+YAVK D N T+ D
Sbjct: 184  DLEDHRMMSQYLPLLREVMPSAAEEIESEIHNYKAKQGSSDGYVYDYYAVKDDTN-TDED 242

Query: 533  SASQFPLVQVXXXXXXXXXXXDSEYETDDSNAENNPLNEYPDEETSEDEDEVISRSSDEK 354
             AS FPLVQV            S+ ++DDSNAE+NP N+YPDEE SEDEDE  ++SS +K
Sbjct: 243  IASPFPLVQVDDDDDYYDGPDYSDDDSDDSNAEHNPWNDYPDEEESEDEDEDETQSSGDK 302

Query: 353  SEVESRSSKNQSEEFESGSHTFYNEHEDTGPYDWSDNADSLLE 225
            SEV S +S++Q      G  +F N  ED G  DWSD AD L++
Sbjct: 303  SEVLSSTSQDQYGSETVGVISFQN--EDVGREDWSDYADPLVD 343


>ref|XP_009621890.1| PREDICTED: RNA-directed DNA methylation 4 isoform X2 [Nicotiana
            tomentosiformis]
          Length = 356

 Score =  342 bits (876), Expect = 5e-91
 Identities = 199/361 (55%), Positives = 239/361 (66%), Gaps = 5/361 (1%)
 Frame = -3

Query: 1235 DSTAIPAKTDKPVIVRVKRKASQSLLDAFWLEINERPIKRPLLDFEKLXXXXXXXSRVEE 1056
            +S++ P+K DKPVIVRVKRK  QS LDAFWLEINERP+KRPLLDFEKL        RVEE
Sbjct: 6    ESSSAPSKEDKPVIVRVKRKTFQSRLDAFWLEINERPLKRPLLDFEKLSISDSSS-RVEE 64

Query: 1055 LKTKKVLVRHVETVISSEVTVDVLRSFVPNSTDALKGR-----RCTFKTENKQEQLLVKA 891
            LK++KVLVRHVETV SSEVTVD+L+SF     DA + +     R +F+ ENKQ+QLL KA
Sbjct: 65   LKSRKVLVRHVETVTSSEVTVDILKSFASAPADASEVKEKAEIRRSFRAENKQDQLLAKA 124

Query: 890  RQRQEVLSKNARFEQIWRSRKGKKEAVEDDAVYEMCRLYDXXXXXXXXXXXXXXXXXXXX 711
            +Q+QE LSKNARFEQIW+SRK KK+ + D+ + EMCRLYD                    
Sbjct: 125  KQKQEDLSKNARFEQIWKSRKEKKKLMHDEELNEMCRLYDVIRVDTEETKHEVQEGTTEL 184

Query: 710  XEDHRMMAQYLPLLREVLPTAAVEIEDDIHNYASRRAFSDDYVYDFYAVKGDANITEADS 531
              DHRMM+QYLPLLREV+P+AA EIE +IHNY +++  SD YVYD+YAVKGD N T  D 
Sbjct: 185  E-DHRMMSQYLPLLREVMPSAAEEIESEIHNYKAKQVSSDGYVYDYYAVKGDTN-TGEDI 242

Query: 530  ASQFPLVQVXXXXXXXXXXXDSEYETDDSNAENNPLNEYPDEETSEDEDEVISRSSDEKS 351
            AS FPLVQV            S+ E+DDSNAE+NP N+YPDEE SEDEDE       + S
Sbjct: 243  ASPFPLVQVDDDDDYCDGPDYSDNESDDSNAEHNPWNDYPDEEESEDEDE--DEDETQSS 300

Query: 350  EVESRSSKNQSEEFESGSHTFYNEHEDTGPYDWSDNADSLLEDGMCFDGIYDMGCPSDED 171
            EV S +S++Q      G  +F N  ED G  DWSD AD L+ DG      YD     DED
Sbjct: 301  EVLSSTSQDQYGSETVGVISFQN--EDVGREDWSDYADPLV-DGESDSEAYD---DDDED 354

Query: 170  L 168
            +
Sbjct: 355  I 355


>ref|XP_009621889.1| PREDICTED: RNA-directed DNA methylation 4 isoform X1 [Nicotiana
            tomentosiformis]
          Length = 357

 Score =  339 bits (870), Expect = 2e-90
 Identities = 199/362 (54%), Positives = 239/362 (66%), Gaps = 6/362 (1%)
 Frame = -3

Query: 1235 DSTAIPAKTDKPVIVRVKRKASQSLLDAFWLEINERPIKRPLLDFEKLXXXXXXXSRVEE 1056
            +S++ P+K DKPVIVRVKRK  QS LDAFWLEINERP+KRPLLDFEKL        RVEE
Sbjct: 6    ESSSAPSKEDKPVIVRVKRKTFQSRLDAFWLEINERPLKRPLLDFEKLSISDSSS-RVEE 64

Query: 1055 LKTKKVLVRHVETVISSEVTVDVLRSFV---PNSTDALKGR---RCTFKTENKQEQLLVK 894
            LK++KVLVRHVETV SSEVTVD+L+SF    P     +K +   R +F+ ENKQ+QLL K
Sbjct: 65   LKSRKVLVRHVETVTSSEVTVDILKSFAQSAPADASEVKEKAEIRRSFRAENKQDQLLAK 124

Query: 893  ARQRQEVLSKNARFEQIWRSRKGKKEAVEDDAVYEMCRLYDXXXXXXXXXXXXXXXXXXX 714
            A+Q+QE LSKNARFEQIW+SRK KK+ + D+ + EMCRLYD                   
Sbjct: 125  AKQKQEDLSKNARFEQIWKSRKEKKKLMHDEELNEMCRLYDVIRVDTEETKHEVQEGTTE 184

Query: 713  XXEDHRMMAQYLPLLREVLPTAAVEIEDDIHNYASRRAFSDDYVYDFYAVKGDANITEAD 534
               DHRMM+QYLPLLREV+P+AA EIE +IHNY +++  SD YVYD+YAVKGD N T  D
Sbjct: 185  LE-DHRMMSQYLPLLREVMPSAAEEIESEIHNYKAKQVSSDGYVYDYYAVKGDTN-TGED 242

Query: 533  SASQFPLVQVXXXXXXXXXXXDSEYETDDSNAENNPLNEYPDEETSEDEDEVISRSSDEK 354
             AS FPLVQV            S+ E+DDSNAE+NP N+YPDEE SEDEDE       + 
Sbjct: 243  IASPFPLVQVDDDDDYCDGPDYSDNESDDSNAEHNPWNDYPDEEESEDEDE--DEDETQS 300

Query: 353  SEVESRSSKNQSEEFESGSHTFYNEHEDTGPYDWSDNADSLLEDGMCFDGIYDMGCPSDE 174
            SEV S +S++Q      G  +F N  ED G  DWSD AD L+ DG      YD     DE
Sbjct: 301  SEVLSSTSQDQYGSETVGVISFQN--EDVGREDWSDYADPLV-DGESDSEAYD---DDDE 354

Query: 173  DL 168
            D+
Sbjct: 355  DI 356


>emb|CDP04072.1| unnamed protein product [Coffea canephora]
          Length = 360

 Score =  337 bits (865), Expect = 9e-90
 Identities = 198/359 (55%), Positives = 248/359 (69%), Gaps = 7/359 (1%)
 Frame = -3

Query: 1232 STAIPAKTDKPVIVRVKRKASQSLLDAFWLEINERPIKRPLLDFEKLXXXXXXXSRVEEL 1053
            S++ PA+ DKPVIVR+KRKASQS +DAFWLEINERP+KRPLLDFEKL        +VEEL
Sbjct: 7    SSSTPAENDKPVIVRIKRKASQSRIDAFWLEINERPLKRPLLDFEKLSISDSST-KVEEL 65

Query: 1052 KTKKVLVRHVETVISSEVTVDVLRSFVPNSTDA--LKGR---RCTFKTENKQEQLLVKAR 888
            K++KV VRHVETV +SEVTVD+L++ V N  D   LKG+   +  FKTENKQE+LL KA+
Sbjct: 66   KSRKVFVRHVETVTTSEVTVDILQTLVSNPADEVELKGKNEIKRKFKTENKQEKLLSKAK 125

Query: 887  QRQEVLSKNARFEQIWRSRKGKKEAVEDDAVYEMCRLYDXXXXXXXXXXXXXXXXXXXXX 708
            ++QE+ SKNARFEQIWRSRK K E   DDA+ EMCRLYD                     
Sbjct: 126  EQQEISSKNARFEQIWRSRKQKNEYANDDALQEMCRLYD--VVRVDVEKKSEVNVDYSEL 183

Query: 707  EDHRMMAQYLPLLREVLPTAAVEIEDDIHNYASRRAFSDDYVYDFYAVKGDANITEADSA 528
            ED RMM++YLPLLRE LP+ AVEIE DI    ++    D YVYD+YAV+ D +ITE ++A
Sbjct: 184  EDCRMMSEYLPLLREALPSVAVEIEADIVGCMAKGELPDKYVYDYYAVQDDMDITEENAA 243

Query: 527  SQFPLVQVXXXXXXXXXXXDSEYETDDSNAENNPLNEYPDEETSEDEDEVISRSSDEKSE 348
            S FPL+QV           DSEYETDDSNAENNPLN+YPDE++S+ ED+V S+ S++ SE
Sbjct: 244  SPFPLLQV-EDDDCYDGPDDSEYETDDSNAENNPLNDYPDEQSSDVEDDVGSKCSEDDSE 302

Query: 347  VESRSSKNQSEEFESGSHTFYNEHEDTGPYDWSDNADSLLEDGMCFDGI--YDMGCPSD 177
            ++ RSS +QSEE ES S     E   +G +DWS+  D + +D   +DG+  YD G  SD
Sbjct: 303  IDGRSSCHQSEEAESISQKSI-ESGLSGQHDWSE--DEMYDD---YDGVESYDYGDFSD 355


>ref|XP_009768481.1| PREDICTED: RNA-directed DNA methylation 4 isoform X3 [Nicotiana
            sylvestris]
          Length = 356

 Score =  335 bits (860), Expect = 4e-89
 Identities = 193/343 (56%), Positives = 240/343 (69%), Gaps = 6/343 (1%)
 Frame = -3

Query: 1235 DSTAIPAKTDKPVIVRVKRKASQSLLDAFWLEINERPIKRPLLDFEKLXXXXXXXSRVEE 1056
            +S+++P+K DKPVIVRVKRKA QS +DAFWLEINERP+KRPLLDFEKL       SRVEE
Sbjct: 6    ESSSVPSKEDKPVIVRVKRKAFQSRVDAFWLEINERPLKRPLLDFEKL-SISDSSSRVEE 64

Query: 1055 LKTKKVLVRHVETVISSEVTVDVLRSF---VPNSTDALKGR---RCTFKTENKQEQLLVK 894
            LK++KVLVRHVETV SS+VTVD+L+SF    P  +  +K +   R +F+ ENKQ+QLL K
Sbjct: 65   LKSRKVLVRHVETVTSSKVTVDILKSFAQSAPVDSSEVKEKAEIRRSFRAENKQDQLLAK 124

Query: 893  ARQRQEVLSKNARFEQIWRSRKGKKEAVEDDAVYEMCRLYDXXXXXXXXXXXXXXXXXXX 714
            A+Q+QE LSKNARFEQIW+SRK K++ + D+ + EMCRLYD                   
Sbjct: 125  AKQKQEDLSKNARFEQIWKSRKEKEKLMHDEELNEMCRLYD-VIRVDTEEKKHEVQEETT 183

Query: 713  XXEDHRMMAQYLPLLREVLPTAAVEIEDDIHNYASRRAFSDDYVYDFYAVKGDANITEAD 534
              EDHRMM+QYLPLLREV+P+AA EIE +IHNY   +A  D YVYD+YAVK D N T+ D
Sbjct: 184  DLEDHRMMSQYLPLLREVMPSAAEEIESEIHNY---KAKQDGYVYDYYAVKDDTN-TDED 239

Query: 533  SASQFPLVQVXXXXXXXXXXXDSEYETDDSNAENNPLNEYPDEETSEDEDEVISRSSDEK 354
             AS FPLVQV            S+ ++DDSNAE+NP N+YPDEE SEDEDE  ++SS +K
Sbjct: 240  IASPFPLVQVDDDDDYYDGPDYSDDDSDDSNAEHNPWNDYPDEEESEDEDEDETQSSGDK 299

Query: 353  SEVESRSSKNQSEEFESGSHTFYNEHEDTGPYDWSDNADSLLE 225
            SEV S +S++Q      G  +F N  ED G  DWSD AD L++
Sbjct: 300  SEVLSSTSQDQYGSETVGVISFQN--EDVGREDWSDYADPLVD 340


>ref|XP_009621891.1| PREDICTED: RNA-directed DNA methylation 4 isoform X3 [Nicotiana
            tomentosiformis]
          Length = 354

 Score =  333 bits (854), Expect = 2e-88
 Identities = 200/362 (55%), Positives = 238/362 (65%), Gaps = 6/362 (1%)
 Frame = -3

Query: 1235 DSTAIPAKTDKPVIVRVKRKASQSLLDAFWLEINERPIKRPLLDFEKLXXXXXXXSRVEE 1056
            +S++ P+K DKPVIVRVKRK  QS LDAFWLEINERP+KRPLLDFEKL        RVEE
Sbjct: 6    ESSSAPSKEDKPVIVRVKRKTFQSRLDAFWLEINERPLKRPLLDFEKLSISDSSS-RVEE 64

Query: 1055 LKTKKVLVRHVETVISSEVTVDVLRSFV---PNSTDALKGR---RCTFKTENKQEQLLVK 894
            LK++KVLVRHVETV SSEVTVD+L+SF    P     +K +   R +F+ ENKQ+QLL K
Sbjct: 65   LKSRKVLVRHVETVTSSEVTVDILKSFAQSAPADASEVKEKAEIRRSFRAENKQDQLLAK 124

Query: 893  ARQRQEVLSKNARFEQIWRSRKGKKEAVEDDAVYEMCRLYDXXXXXXXXXXXXXXXXXXX 714
            A+Q+QE LSKNARFEQIW+SRK KK+ + D+ + EMCRLYD                   
Sbjct: 125  AKQKQEDLSKNARFEQIWKSRKEKKKLMHDEELNEMCRLYD-VIRVDTEETKHEVQEGTT 183

Query: 713  XXEDHRMMAQYLPLLREVLPTAAVEIEDDIHNYASRRAFSDDYVYDFYAVKGDANITEAD 534
              EDHRMM+QYLPLLREV+P+AA EIE +IHNY   +A  D YVYD+YAVKGD N T  D
Sbjct: 184  ELEDHRMMSQYLPLLREVMPSAAEEIESEIHNY---KAKQDGYVYDYYAVKGDTN-TGED 239

Query: 533  SASQFPLVQVXXXXXXXXXXXDSEYETDDSNAENNPLNEYPDEETSEDEDEVISRSSDEK 354
             AS FPLVQV            S+ E+DDSNAE+NP N+YPDEE SEDEDE       + 
Sbjct: 240  IASPFPLVQVDDDDDYCDGPDYSDNESDDSNAEHNPWNDYPDEEESEDEDE--DEDETQS 297

Query: 353  SEVESRSSKNQSEEFESGSHTFYNEHEDTGPYDWSDNADSLLEDGMCFDGIYDMGCPSDE 174
            SEV S +S++Q      G  +F N  ED G  DWSD AD L+ DG      YD     DE
Sbjct: 298  SEVLSSTSQDQYGSETVGVISFQN--EDVGREDWSDYADPLV-DGESDSEAYD---DDDE 351

Query: 173  DL 168
            D+
Sbjct: 352  DI 353


>ref|XP_006350874.1| PREDICTED: RNA-directed DNA methylation 4-like isoform X2 [Solanum
            tuberosum]
          Length = 436

 Score =  331 bits (849), Expect = 7e-88
 Identities = 186/352 (52%), Positives = 237/352 (67%), Gaps = 5/352 (1%)
 Frame = -3

Query: 1265 FRPPLPDSMDDSTAIPAKTDKPVIVRVKRKASQSLLDAFWLEINERPIKRPLLDFEKLXX 1086
            F P    ++ +S+++PAK DK V+VRVKRK  QS LDAFWLEINERP KRPLLDF KL  
Sbjct: 73   FFPASMAAVGESSSVPAKEDKLVVVRVKRKTFQSRLDAFWLEINERPAKRPLLDFAKLSI 132

Query: 1085 XXXXXSRVEELKTKKVLVRHVETVISSEVTVDVLRSFVPNSTDALK-----GRRCTFKTE 921
                  RVEELK++KVLV+HVETV SSEVTVD+++ FV    D+ +       R +F+TE
Sbjct: 133  DESSS-RVEELKSRKVLVQHVETVTSSEVTVDIVKFFVSAPADSSEVEEKSDARRSFRTE 191

Query: 920  NKQEQLLVKARQRQEVLSKNARFEQIWRSRKGKKEAVEDDAVYEMCRLYDXXXXXXXXXX 741
             KQ+QLL KA+Q+QE LSKNARFEQIW+SRK K++ + ++ + EMCRLYD          
Sbjct: 192  KKQDQLLAKAKQKQEDLSKNARFEQIWKSRKEKRKLMHNEELNEMCRLYDVIRVDTEEKS 251

Query: 740  XXXXXXXXXXXEDHRMMAQYLPLLREVLPTAAVEIEDDIHNYASRRAFSDDYVYDFYAVK 561
                        DH+MM+QYLPLLREV+P+AA EIE +IHNY S++A SD YVYD+Y VK
Sbjct: 252  HEVQEETTELE-DHKMMSQYLPLLREVMPSAAEEIESEIHNYVSKQASSDGYVYDYYTVK 310

Query: 560  GDANITEADSASQFPLVQVXXXXXXXXXXXDSEYETDDSNAENNPLNEYPDEETSEDEDE 381
             D N  + D AS FPLVQV            S+YE+DDSNAE+NP N+YPDEE SEDEDE
Sbjct: 311  NDTN-PDKDIASPFPLVQVDEDDDYYDGPDHSDYESDDSNAEHNPWNDYPDEEESEDEDE 369

Query: 380  VISRSSDEKSEVESRSSKNQSEEFESGSHTFYNEHEDTGPYDWSDNADSLLE 225
              +++S+++SE  S +S+ Q      G  +F N  ED G  DW+D AD +LE
Sbjct: 370  --TQASNDESEASSSTSEEQYGSETVGVISFTN--EDVGREDWTDYADPILE 417


>ref|XP_006350873.1| PREDICTED: RNA-directed DNA methylation 4-like isoform X1 [Solanum
            tuberosum]
          Length = 438

 Score =  331 bits (848), Expect = 9e-88
 Identities = 186/353 (52%), Positives = 237/353 (67%), Gaps = 6/353 (1%)
 Frame = -3

Query: 1265 FRPPLPDSMDDSTAIPAKTDKPVIVRVKRKASQSLLDAFWLEINERPIKRPLLDFEKLXX 1086
            F P    ++ +S+++PAK DK V+VRVKRK  QS LDAFWLEINERP KRPLLDF KL  
Sbjct: 73   FFPASMAAVGESSSVPAKEDKLVVVRVKRKTFQSRLDAFWLEINERPAKRPLLDFAKLSI 132

Query: 1085 XXXXXSRVEELKTKKVLVRHVETVISSEVTVDVLRSFVPNSTDALK-----GRRCTFKTE 921
                  RVEELK++KVLV+HVETV SSEVTVD+++ FV    D+ +       R +F+TE
Sbjct: 133  DESSS-RVEELKSRKVLVQHVETVTSSEVTVDIVKFFVSAPADSSEVEEKSDARRSFRTE 191

Query: 920  NKQEQLLVKARQRQEVLSKNARFEQIWRSRKGKKEAVEDDAVYEMCRLYDXXXXXXXXXX 741
             KQ+QLL KA+Q+QE LSKNARFEQIW+SRK K++ + ++ + EMCRLYD          
Sbjct: 192  KKQDQLLAKAKQKQEDLSKNARFEQIWKSRKEKRKLMHNEELNEMCRLYDVIRVDTEEKS 251

Query: 740  XXXXXXXXXXXE-DHRMMAQYLPLLREVLPTAAVEIEDDIHNYASRRAFSDDYVYDFYAV 564
                         DH+MM+QYLPLLREV+P+AA EIE +IHNY S++A SD YVYD+Y V
Sbjct: 252  HEVQEECRTTELEDHKMMSQYLPLLREVMPSAAEEIESEIHNYVSKQASSDGYVYDYYTV 311

Query: 563  KGDANITEADSASQFPLVQVXXXXXXXXXXXDSEYETDDSNAENNPLNEYPDEETSEDED 384
            K D N  + D AS FPLVQV            S+YE+DDSNAE+NP N+YPDEE SEDED
Sbjct: 312  KNDTN-PDKDIASPFPLVQVDEDDDYYDGPDHSDYESDDSNAEHNPWNDYPDEEESEDED 370

Query: 383  EVISRSSDEKSEVESRSSKNQSEEFESGSHTFYNEHEDTGPYDWSDNADSLLE 225
            E  +++S+++SE  S +S+ Q      G  +F N  ED G  DW+D AD +LE
Sbjct: 371  E--TQASNDESEASSSTSEEQYGSETVGVISFTN--EDVGREDWTDYADPILE 419


>ref|XP_004242490.1| PREDICTED: RNA-directed DNA methylation 4 [Solanum lycopersicum]
          Length = 359

 Score =  323 bits (828), Expect = 2e-85
 Identities = 183/348 (52%), Positives = 234/348 (67%), Gaps = 5/348 (1%)
 Frame = -3

Query: 1244 SMDDSTAIPAKTDKPVIVRVKRKASQSLLDAFWLEINERPIKRPLLDFEKLXXXXXXXSR 1065
            ++ +S+++PAK DK V+VRVKRKA QS LDAFWLEINERP KRPLLDF KL        R
Sbjct: 3    AVGESSSVPAKEDKLVVVRVKRKAFQSRLDAFWLEINERPAKRPLLDFAKLSIDESSS-R 61

Query: 1064 VEELKTKKVLVRHVETVISSEVTVDVLRSFVP-----NSTDALKGRRCTFKTENKQEQLL 900
            VEELK++KVLV+HVETV SSEVTVD+++SFV      +  +     R +F+TE KQ+QLL
Sbjct: 62   VEELKSRKVLVQHVETVTSSEVTVDIVKSFVSAPAVSSEVEEKSEVRRSFRTEKKQDQLL 121

Query: 899  VKARQRQEVLSKNARFEQIWRSRKGKKEAVEDDAVYEMCRLYDXXXXXXXXXXXXXXXXX 720
             KA+Q QE LSKNARFEQIW+SRK K++ + ++ + EMC+LYD                 
Sbjct: 122  AKAKQTQEDLSKNARFEQIWKSRKEKRKLMHNEELNEMCKLYDVIRVDTEEKGREVQEET 181

Query: 719  XXXXEDHRMMAQYLPLLREVLPTAAVEIEDDIHNYASRRAFSDDYVYDFYAVKGDANITE 540
                 DH+MM+QYLPLLREV+P+AA EIE +IHNY  ++A SD YVYD+Y VK D N  E
Sbjct: 182  TELE-DHKMMSQYLPLLREVMPSAAEEIESEIHNYVVKQASSDGYVYDYYTVKTDNNPDE 240

Query: 539  ADSASQFPLVQVXXXXXXXXXXXDSEYETDDSNAENNPLNEYPDEETSEDEDEVISRSSD 360
             D A  FPLVQV            S+YE+DDSNAE+NP N+YPDEE SEDEDE  +++S+
Sbjct: 241  -DIACPFPLVQVDEDDDYYDGPDHSDYESDDSNAEHNPWNDYPDEEESEDEDE--TQASN 297

Query: 359  EKSEVESRSSKNQSEEFESGSHTFYNEHEDTGPYDWSDNADSLLEDGM 216
            ++SE  S +S+ Q      G  +F  + ED    DW+D AD +LED M
Sbjct: 298  DESEASSSTSEEQFGSETVGVISF--KTEDVDREDWTDYADPILEDDM 343


>ref|XP_010650841.1| PREDICTED: RNA-directed DNA methylation 4 isoform X2 [Vitis vinifera]
          Length = 382

 Score =  315 bits (808), Expect = 4e-83
 Identities = 172/308 (55%), Positives = 215/308 (69%), Gaps = 7/308 (2%)
 Frame = -3

Query: 1205 KPVIVRVKRKASQSLLDAFWLEINERPIKRPLLDFEKLXXXXXXXSRVEELKTKKVLVRH 1026
            KPVIVRVKRKA QSLL+AFWLEINERP+KRPLLD EKL          EE+KTKKVLV+H
Sbjct: 40   KPVIVRVKRKAFQSLLEAFWLEINERPLKRPLLDLEKLSISDSSGK--EEVKTKKVLVQH 97

Query: 1025 VETVISSEVTVDVLRSFVPNSTDALKG------RRCTFKTENKQEQLLVKARQRQEVLSK 864
            +ETV +SE   ++L+SF PNS  AL        RR TFK EN Q+QLLVKARQ QE+L+K
Sbjct: 98   LETVSTSEAAYNILQSFAPNSDGALDSKTKSDERRHTFKKENIQDQLLVKARQEQEILAK 157

Query: 863  NARFEQIWRSRKGKKEAVEDDAVYEMCRLYDXXXXXXXXXXXXXXXXXXXXXEDHRMMAQ 684
            NARFEQIWRSRKGK EA +D A++EMC LYD                      D  ++  
Sbjct: 158  NARFEQIWRSRKGKNEAAQDKALHEMCHLYDVVRVDVEETSSQVQEDMSLE--DQMILCN 215

Query: 683  YLPLLREVLPTAAVEIEDDIHNYASRRAFSDDYVYDFYAVKGDANITEADSASQFPLVQV 504
            YLPL+R+ +P+AA EIE DIH Y S++A  D+YVYD YAVK D NIT+ D+ + FPLVQV
Sbjct: 216  YLPLIRDFIPSAAAEIESDIHAYMSKQASPDEYVYDLYAVKDDMNITDEDALNPFPLVQV 275

Query: 503  XXXXXXXXXXXDSEYETDDSNAENNPLNEYPDEETSEDEDEVISRSSDEKS-EVESRSSK 327
                       +SE+E+DDSNAE+NPLN+YPDEETSEDE++  SR+SD++S E +S S+ 
Sbjct: 276  DEDDEFYAGPPESEFESDDSNAEDNPLNDYPDEETSEDEEDSDSRASDDESGEPKSDSAS 335

Query: 326  NQSEEFES 303
            ++S + E+
Sbjct: 336  DRSLDSEN 343


>emb|CBI15854.3| unnamed protein product [Vitis vinifera]
          Length = 355

 Score =  315 bits (808), Expect = 4e-83
 Identities = 172/308 (55%), Positives = 215/308 (69%), Gaps = 7/308 (2%)
 Frame = -3

Query: 1205 KPVIVRVKRKASQSLLDAFWLEINERPIKRPLLDFEKLXXXXXXXSRVEELKTKKVLVRH 1026
            KPVIVRVKRKA QSLL+AFWLEINERP+KRPLLD EKL          EE+KTKKVLV+H
Sbjct: 13   KPVIVRVKRKAFQSLLEAFWLEINERPLKRPLLDLEKLSISDSSGK--EEVKTKKVLVQH 70

Query: 1025 VETVISSEVTVDVLRSFVPNSTDALKG------RRCTFKTENKQEQLLVKARQRQEVLSK 864
            +ETV +SE   ++L+SF PNS  AL        RR TFK EN Q+QLLVKARQ QE+L+K
Sbjct: 71   LETVSTSEAAYNILQSFAPNSDGALDSKTKSDERRHTFKKENIQDQLLVKARQEQEILAK 130

Query: 863  NARFEQIWRSRKGKKEAVEDDAVYEMCRLYDXXXXXXXXXXXXXXXXXXXXXEDHRMMAQ 684
            NARFEQIWRSRKGK EA +D A++EMC LYD                      D  ++  
Sbjct: 131  NARFEQIWRSRKGKNEAAQDKALHEMCHLYDVVRVDVEETSSQVQEDMSLE--DQMILCN 188

Query: 683  YLPLLREVLPTAAVEIEDDIHNYASRRAFSDDYVYDFYAVKGDANITEADSASQFPLVQV 504
            YLPL+R+ +P+AA EIE DIH Y S++A  D+YVYD YAVK D NIT+ D+ + FPLVQV
Sbjct: 189  YLPLIRDFIPSAAAEIESDIHAYMSKQASPDEYVYDLYAVKDDMNITDEDALNPFPLVQV 248

Query: 503  XXXXXXXXXXXDSEYETDDSNAENNPLNEYPDEETSEDEDEVISRSSDEKS-EVESRSSK 327
                       +SE+E+DDSNAE+NPLN+YPDEETSEDE++  SR+SD++S E +S S+ 
Sbjct: 249  DEDDEFYAGPPESEFESDDSNAEDNPLNDYPDEETSEDEEDSDSRASDDESGEPKSDSAS 308

Query: 326  NQSEEFES 303
            ++S + E+
Sbjct: 309  DRSLDSEN 316


>ref|XP_010650840.1| PREDICTED: RNA-directed DNA methylation 4 isoform X1 [Vitis vinifera]
          Length = 383

 Score =  312 bits (800), Expect = 3e-82
 Identities = 172/309 (55%), Positives = 216/309 (69%), Gaps = 8/309 (2%)
 Frame = -3

Query: 1205 KPVIVRVKRKASQSLLDAFWLEINERPIKRPLLDFEKLXXXXXXXSRVEELKTKKVLVRH 1026
            KPVIVRVKRKA QSLL+AFWLEINERP+KRPLLD EKL          EE+KTKKVLV+H
Sbjct: 40   KPVIVRVKRKAFQSLLEAFWLEINERPLKRPLLDLEKLSISDSSGK--EEVKTKKVLVQH 97

Query: 1025 VETVISSEVTVDVLRSFVPNSTDALKG------RRCTFKTENK-QEQLLVKARQRQEVLS 867
            +ETV +SE   ++L+SF PNS  AL        RR TFK EN+ Q+QLLVKARQ QE+L+
Sbjct: 98   LETVSTSEAAYNILQSFAPNSDGALDSKTKSDERRHTFKKENQIQDQLLVKARQEQEILA 157

Query: 866  KNARFEQIWRSRKGKKEAVEDDAVYEMCRLYDXXXXXXXXXXXXXXXXXXXXXEDHRMMA 687
            KNARFEQIWRSRKGK EA +D A++EMC LYD                      D  ++ 
Sbjct: 158  KNARFEQIWRSRKGKNEAAQDKALHEMCHLYDVVRVDVEETSSQVQEDMSLE--DQMILC 215

Query: 686  QYLPLLREVLPTAAVEIEDDIHNYASRRAFSDDYVYDFYAVKGDANITEADSASQFPLVQ 507
             YLPL+R+ +P+AA EIE DIH Y S++A  D+YVYD YAVK D NIT+ D+ + FPLVQ
Sbjct: 216  NYLPLIRDFIPSAAAEIESDIHAYMSKQASPDEYVYDLYAVKDDMNITDEDALNPFPLVQ 275

Query: 506  VXXXXXXXXXXXDSEYETDDSNAENNPLNEYPDEETSEDEDEVISRSSDEKS-EVESRSS 330
            V           +SE+E+DDSNAE+NPLN+YPDEETSEDE++  SR+SD++S E +S S+
Sbjct: 276  VDEDDEFYAGPPESEFESDDSNAEDNPLNDYPDEETSEDEEDSDSRASDDESGEPKSDSA 335

Query: 329  KNQSEEFES 303
             ++S + E+
Sbjct: 336  SDRSLDSEN 344


>ref|XP_010256965.1| PREDICTED: RNA-directed DNA methylation 4 isoform X1 [Nelumbo
            nucifera]
          Length = 353

 Score =  300 bits (769), Expect = 1e-78
 Identities = 173/339 (51%), Positives = 220/339 (64%), Gaps = 11/339 (3%)
 Frame = -3

Query: 1253 LPDSMDDSTAIPAK--TDKPVIVRVKRKASQSLLDAFWLEINERPIKRPLLDFEKLXXXX 1080
            + D  + S++  +K   +KPVIVRVKRK+SQS LDAFWLEINERP+K+PLLDF KL    
Sbjct: 1    MEDICEGSSSFSSKIMNEKPVIVRVKRKSSQSRLDAFWLEINERPLKKPLLDFGKLSISD 60

Query: 1079 XXXSRVEELKTKKVLVRHVETVISSEVTVDVLRSFVPNSTDA------LKGRRCTFKTEN 918
                  EELKTKKV V+H++TV SSE T+D+L+SFVPN++DA      L+ RR TFK +N
Sbjct: 61   STGK--EELKTKKVFVQHLDTVTSSEATIDILQSFVPNASDASELRTKLEERRHTFKQDN 118

Query: 917  KQEQLLVKARQRQEVLSKNARFEQIWRSRKGKKEAVEDDAVYEMCRLYD---XXXXXXXX 747
            KQ QLL KARQ+ EVLSKNARFEQIW+ RKG+K+ + DD++ E+C LYD           
Sbjct: 119  KQNQLLSKARQKHEVLSKNARFEQIWKRRKGRKDTMPDDSLNEICHLYDVVCVDVEEEIS 178

Query: 746  XXXXXXXXXXXXXEDHRMMAQYLPLLREVLPTAAVEIEDDIHNYASRRAFSDDYVYDFYA 567
                         ED+ ++  YLPLLRE +P+AA EIE DI  Y S +   DDYVYD Y 
Sbjct: 179  SEVEEQKCSETSLEDNAILLNYLPLLREFVPSAAAEIESDISAYKSEQDLKDDYVYDLYM 238

Query: 566  VKGDANITEADSASQFPLVQVXXXXXXXXXXXDSEYETDDSNAENNPLNEYPDEETSEDE 387
            +K   +  E DS S +PLVQV            SE+E+DDSNAE+NPLN+YPDEETSEDE
Sbjct: 239  MKDGLSYEECDSNS-YPLVQVDDEDDFYGGPIQSEFESDDSNAEDNPLNDYPDEETSEDE 297

Query: 386  DEVISRSSDEKSEVESRSSKNQSEEFESGSHTFYNEHED 270
             ++   SS ++S+   R+    SEE E    T+YN H D
Sbjct: 298  PQI---SSHDESQENGRAFDGDSEEVE--DETYYN-HSD 330


>ref|XP_002520100.1| conserved hypothetical protein [Ricinus communis]
            gi|223540728|gb|EEF42289.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 363

 Score =  292 bits (747), Expect = 5e-76
 Identities = 169/356 (47%), Positives = 225/356 (63%), Gaps = 10/356 (2%)
 Frame = -3

Query: 1244 SMDDSTAIPAKT--DKPVIVRVKRKASQSLLDAFWLEINERPIKRPLLDFEKLXXXXXXX 1071
            SM +S++ P  T  +KP++VRVKRK+SQ  LDA WLEINERP KRPL DF+KL       
Sbjct: 3    SMGESSSTPKCTTIEKPLVVRVKRKSSQFRLDALWLEINERPSKRPLFDFQKLSISDDSA 62

Query: 1070 SR-VEELKTKKVLVRHVETVISSEVTVDVLRSFVPNSTDAL---KGRRCTFKTENKQEQL 903
             + VEE KTKKV V H+ TV SS+V  D+L+SFVP+S +A+   + R+ TFK +NKQEQL
Sbjct: 63   HKKVEESKTKKVFVHHITTVSSSDVITDILQSFVPSSAEAIPKSEERKQTFKKDNKQEQL 122

Query: 902  LVKARQRQEVLSKNARFEQIWRSRKGKKEAVEDDAVYEMCRLYDXXXXXXXXXXXXXXXX 723
            L KARQ QE+ ++NARFEQIWRSR+G KEA +D A+++MC  YD                
Sbjct: 123  LSKARQSQEISAQNARFEQIWRSRRGNKEASDDRALHDMCHFYDVVRVDVGGRSTVMQEQ 182

Query: 722  XXXXXEDHRMMAQYLPLLREVLPTAAVEIEDDIHNYASRRAFSDDYVYDFYAVKGDANIT 543
                 ED ++++ YLPLLRE +P+AA +IE DI+N  S+    DDYVYD+Y V+ D  + 
Sbjct: 183  EVMSLEDQKILSSYLPLLREFIPSAAADIECDINNCMSK---PDDYVYDYYTVRDDMGMG 239

Query: 542  EADSASQFPLVQVXXXXXXXXXXXDSEYETDDSNAENNPLNEYPDEETSEDEDEVISRSS 363
            + DS S FPLVQV           +SEYE++DSNAE++P N+YPDE + E+++E I  SS
Sbjct: 240  DEDSLSPFPLVQVEDEDFYDGPDDESEYESEDSNAEHHPRNDYPDEASEEEDEEEIEASS 299

Query: 362  DEKSEVESRSSKNQSEEFESGSHTFYNE----HEDTGPYDWSDNADSLLEDGMCFD 207
            +E  E +  S+   S EFE   H    +    HED G YD  D+     ED   F+
Sbjct: 300  NESEEHDDTST--GSSEFEECLHGLSEDAVPSHED-GLYDDDDDDAFYYEDDDDFE 352


>ref|XP_012839144.1| PREDICTED: RNA-directed DNA methylation 4 isoform X1 [Erythranthe
            guttatus] gi|604347446|gb|EYU45683.1| hypothetical
            protein MIMGU_mgv1a009018mg [Erythranthe guttata]
          Length = 355

 Score =  289 bits (740), Expect = 3e-75
 Identities = 173/353 (49%), Positives = 223/353 (63%), Gaps = 20/353 (5%)
 Frame = -3

Query: 1241 MDD--STAIPAKTDKPVIVRVKRKASQSLLDAFWLEINERPIKRPLLDFEKLXXXXXXXS 1068
            MDD  + A  A   KP++V VKRKA  S LDAFWLEI ERP+K+P +D  KL       S
Sbjct: 1    MDDVVTLAPAANAVKPIVVSVKRKAFHSPLDAFWLEIQERPLKKPTIDIAKLSISGASSS 60

Query: 1067 RVEELKTKKVLVRHVETVISSEVTVDVLRSFVPNSTDALKG------------RRCTFKT 924
            RVEE   +K+LV+H+ETV SSE T+DVLRSF+PNS+  LK             RR  F  
Sbjct: 61   RVEEPGPQKILVQHLETVESSEHTLDVLRSFMPNSSGELKSKDIDEKRRRSLERRRRFPI 120

Query: 923  ENKQEQLLVKARQRQEVLSKNARFEQIWRSRKGKKEAVEDDAVYEMCRLYDXXXXXXXXX 744
             NK +QL++KA++R+E +++N+RFEQIWRSRK      ED A+++MCRLY+         
Sbjct: 121  LNKLDQLMIKAKERKEGVARNSRFEQIWRSRKPGTIDTEDKAIHDMCRLYEVIRVDKEPE 180

Query: 743  XXXXXXXXXXXXEDHRMMAQYLPLLREVLPTAAVEIEDDIHNYASRRAFSDD---YVYDF 573
                         D +M+A+YLPL+RE+LP+AA EIE DI N   +   SD+   YVYDF
Sbjct: 181  IEEQQESRMDLDGDCKMVAEYLPLMREILPSAASEIESDIQNRMFKEDSSDEDDFYVYDF 240

Query: 572  YAVKGDANITEADSASQFPLVQVXXXXXXXXXXXDSEYETDDSNAENNPLNEYPDEE--T 399
            Y VK DAN+T +DS   FPL+ V           DSEYETDDSNAENN  N+YP+EE  T
Sbjct: 241  YVVKEDANVTVSDSEVPFPLIHV--EDDFYDGRDDSEYETDDSNAENNIRNDYPEEEETT 298

Query: 398  SEDEDEVI-SRSSDEKSEVESRSSKNQSEEFESGSHTFYNEHEDTGPYDWSDN 243
             +DEDEV+ SRSSDE+SE ES++S +QSEE +      + E+E+    DWSDN
Sbjct: 299  EDDEDEVMSSRSSDEESERESKTSGSQSEEEDKSRSKLHKEYEEE-LGDWSDN 350


>ref|XP_006431976.1| hypothetical protein CICLE_v10001595mg [Citrus clementina]
            gi|557534098|gb|ESR45216.1| hypothetical protein
            CICLE_v10001595mg [Citrus clementina]
          Length = 364

 Score =  287 bits (734), Expect = 1e-74
 Identities = 178/369 (48%), Positives = 226/369 (61%), Gaps = 11/369 (2%)
 Frame = -3

Query: 1238 DDSTAIPAKT-DKPVIVRVKRKASQSLLDAFWLEINERPIKRPLLDFEKLXXXXXXXSRV 1062
            + S+A+P  T DKPVIVRVKRKAS+  L+AFWLEINERP+KRPLLDFEKL         +
Sbjct: 7    ESSSALPKPTNDKPVIVRVKRKASRPPLEAFWLEINERPLKRPLLDFEKLSISSSSG--I 64

Query: 1061 EELKTKKVLVRHVETVISSEVTVDVLRSFVPNSTDALKG----RRCTFKTENKQEQLLVK 894
            EELK +KV V+HVET  +SE  +D+++SFVPN TD LK     RR  FK +N+ +Q L K
Sbjct: 65   EELKARKVFVQHVETATTSEANIDIVQSFVPNFTDVLKTKSEERRLAFKKDNRHDQNLSK 124

Query: 893  ARQRQEVLSKNARFEQIWRSRKGKKEAVEDDAVYEMCRLYDXXXXXXXXXXXXXXXXXXX 714
            ARQ+QEVL+KNARFEQIWRSRKG KE +    + EMC  YD                   
Sbjct: 125  ARQQQEVLAKNARFEQIWRSRKGHKEELHHKELREMCHFYD--VVRVDGEEKSNEVQRDM 182

Query: 713  XXEDHRMMAQYLPLLREVLPTAAVEIEDDIHNYASRRAFSDDYVYDFYAVKGDANITEAD 534
              ED R+++ YLP+LRE LP AA EIE D+  Y S++   DDYVYD+YAV  D N+ E D
Sbjct: 183  SLEDQRLLSSYLPMLREFLPGAAAEIESDMCAYLSKQ---DDYVYDYYAVNDDMNVDE-D 238

Query: 533  SASQFPLVQVXXXXXXXXXXXDSEYETDDSNAENNPLNEYPDEETSEDEDEVISRSSDEK 354
            ++S FPLVQV           +SEY+++DSNAE+NP NEYPDE + E E+E      +E 
Sbjct: 239  ASSPFPLVQV-DDEEFYDGPDESEYDSEDSNAEDNPRNEYPDEISDEQEEEEEEEEEEEV 297

Query: 353  SE--VESRSSKNQSEEFES---GSHTFYNEHEDTGPYDWSDNADSLLEDGMCFDGIYDMG 189
             E  VES++++N  +E E     S       ED   YD  +N      D  CFD + D  
Sbjct: 298  DEDGVESKATENSEDESERAGIASRDIDRFLEDEIYYDDFEN------DDHCFDNLDDEK 351

Query: 188  CPSD-EDLR 165
              +D ED R
Sbjct: 352  NDADGEDWR 360


>ref|XP_008230242.1| PREDICTED: RNA-directed DNA methylation 4 isoform X2 [Prunus mume]
          Length = 357

 Score =  286 bits (732), Expect = 2e-74
 Identities = 177/348 (50%), Positives = 221/348 (63%), Gaps = 15/348 (4%)
 Frame = -3

Query: 1235 DSTAIPAKT--DKPVIVRVKRKASQSLLDAFWLEINERPIKRPLLDFEKLXXXXXXXSRV 1062
            +S++  AK+  DKPVIVRVKRKA QS LDAFWLEINERP KRPLLDFE L        + 
Sbjct: 6    ESSSALAKSPEDKPVIVRVKRKALQSPLDAFWLEINERPQKRPLLDFENLSMSDLAA-KA 64

Query: 1061 EELKTKKVLVRHVETVISSEVTVDVLRSFVP-NSTDAL------KGRRCTFKTENKQEQL 903
            EELKTKKV V+HVETV S   TVDV++SFV  NS D        + R+ TFK ENKQ+Q+
Sbjct: 65   EELKTKKVFVQHVETVSSFHTTVDVVKSFVDLNSNDVCDRKTRNEERKHTFKKENKQDQI 124

Query: 902  LVKARQRQEVLSKNARFEQIWRSRKGKKEAVEDDAVYEMCRLYDXXXXXXXXXXXXXXXX 723
            L KARQ+QEV++KNARFEQIWRSRKG KE    + ++EMC  YD                
Sbjct: 125  LSKARQKQEVVAKNARFEQIWRSRKGNKET-SHEKLHEMCHFYDVVRVDVEERSNELQQE 183

Query: 722  XXXXXEDHRMMAQYLPLLREVLPTAAVEIEDDIHNYASRRAFSDDYVYDFYAVKGDANIT 543
                 ED RM+  YLPLLRE +P+AA EIE D+   +S++A  D YVYD YAVK + +I 
Sbjct: 184  DEISLEDQRMLNSYLPLLREFIPSAASEIESDLSANSSKQASEDGYVYDLYAVKEEMDID 243

Query: 542  EADSASQFPLVQVXXXXXXXXXXXDSEYETDDSNAENNPLNEYPDEETSEDEDEVISRSS 363
              DS+  FPLVQV           +SEY+TDDSNAENNPLN+YP EE SE+E E  S +S
Sbjct: 244  TEDSSKPFPLVQV-DDKDLYDGPDESEYDTDDSNAENNPLNDYP-EEISEEESE--SDTS 299

Query: 362  DEKSEVESRSSKNQS-----EEFESGSHTFYNEHEDTGPYDWS-DNAD 237
            D++SE    SS+  S     E+ +      Y+E++D   +D+  D +D
Sbjct: 300  DDESEENESSSEKSSEPKGLEDNDLLEDDMYDENDDGDDFDYDVDQSD 347


>ref|XP_006468138.1| PREDICTED: RNA-directed DNA methylation 4-like isoform X1 [Citrus
            sinensis] gi|568827600|ref|XP_006468139.1| PREDICTED:
            RNA-directed DNA methylation 4-like isoform X2 [Citrus
            sinensis] gi|568827602|ref|XP_006468140.1| PREDICTED:
            RNA-directed DNA methylation 4-like isoform X3 [Citrus
            sinensis] gi|568827604|ref|XP_006468141.1| PREDICTED:
            RNA-directed DNA methylation 4-like isoform X4 [Citrus
            sinensis] gi|568827606|ref|XP_006468142.1| PREDICTED:
            RNA-directed DNA methylation 4-like isoform X5 [Citrus
            sinensis]
          Length = 364

 Score =  286 bits (732), Expect = 2e-74
 Identities = 174/362 (48%), Positives = 222/362 (61%), Gaps = 11/362 (3%)
 Frame = -3

Query: 1253 LPDSMDDSTAIPAK--TDKPVIVRVKRKASQSLLDAFWLEINERPIKRPLLDFEKLXXXX 1080
            +  S  +S++ P K   DKPVIVRVKRKAS+  L+AFWLEINERP+KRPLLDFEKL    
Sbjct: 1    MASSHGESSSAPPKPTNDKPVIVRVKRKASRPPLEAFWLEINERPLKRPLLDFEKLSISS 60

Query: 1079 XXXSRVEELKTKKVLVRHVETVISSEVTVDVLRSFVPNSTDALKG----RRCTFKTENKQ 912
                 +EELK +KV V+HVET  +SE  +D+++SFVPN TD LK     RR  FK +N+ 
Sbjct: 61   SSG--IEELKARKVFVQHVETATTSEANIDIVQSFVPNFTDVLKTKSEERRLAFKKDNRH 118

Query: 911  EQLLVKARQRQEVLSKNARFEQIWRSRKGKKEAVEDDAVYEMCRLYDXXXXXXXXXXXXX 732
            +Q L KARQ+QEVL+KNARFEQIWRSRKG KE +    + EMC  YD             
Sbjct: 119  DQNLSKARQQQEVLAKNARFEQIWRSRKGHKEELHHKELREMCHFYD--VVRVDGEEKSN 176

Query: 731  XXXXXXXXEDHRMMAQYLPLLREVLPTAAVEIEDDIHNYASRRAFSDDYVYDFYAVKGDA 552
                    ED R+++ YLP+LRE LP AA EIE D+  Y S++   DDYVYD+YAV  D 
Sbjct: 177  EVQRDMSLEDQRLLSSYLPMLREFLPGAAAEIESDMWAYLSKQ---DDYVYDYYAVNDDM 233

Query: 551  NITEADSASQFPLVQVXXXXXXXXXXXDSEYETDDSNAENNPLNEYPDEETSEDEDEVIS 372
            N+ E D++S FPLVQV           +SEY+++DSNAE+NP NEYPDE + E E+E   
Sbjct: 234  NVDE-DASSPFPLVQV-DDEEFYDGPDESEYDSEDSNAEDNPRNEYPDEISDEQEEEEEE 291

Query: 371  RSSDEKSE--VESRSSKNQSEEFESG---SHTFYNEHEDTGPYDWSDNADSLLEDGMCFD 207
               +E  E  VES++++N  +E E G   S       ED   YD  +N      D  CFD
Sbjct: 292  EEEEEVDEDGVESKATENSEDESERGGIASRDVDRFLEDEIYYDDFEN------DDHCFD 345

Query: 206  GI 201
             +
Sbjct: 346  NL 347