BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Forsythia21_contig00014326
         (2064 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN67403.1| hypothetical protein VITISV_025614 [Vitis vinifera]   434   e-174
emb|CAN59952.1| hypothetical protein VITISV_006720 [Vitis vinifera]   432   e-166
emb|CCH50966.1| T4.5 [Malus x robusta]                                411   e-161
emb|CAN81355.1| hypothetical protein VITISV_039158 [Vitis vinifera]   412   e-160
gb|AAN06870.1| Putative gag-pol polyprotein [Oryza sativa Japoni...   395   e-158
gb|AAC02664.1| polyprotein [Arabidopsis thaliana]                     385   e-157
pir||T02087 gag/pol polyprotein - maize retrotransposon Hopscotc...   387   e-157
gb|AAC02669.1| polyprotein [Arabidopsis thaliana]                     388   e-156
gb|AAC02666.1| polyprotein [Arabidopsis thaliana]                     385   e-156
emb|CAN65591.1| hypothetical protein VITISV_042091 [Vitis vinifera]   398   e-155
gb|AAR88589.1| putative copia-like retrotransposon protein [Oryz...   383   e-154
gb|AAL66754.1|AF464738_5 putative copia-like retrotransposon Hop...   382   e-154
gb|ABA98049.1| retrotransposon protein, putative, Ty1-copia subc...   388   e-154
gb|ACY72569.1| unknown [Oryza sativa Japonica Group]                  386   e-153
ref|XP_006494841.1| PREDICTED: uncharacterized protein LOC102608...   372   e-152
gb|AAT85031.1| putative polyprotein [Oryza sativa Japonica Group...   378   e-151
dbj|BAB90546.1| putative rice retrotransposon retrofit gag/pol p...   380   e-150
emb|CAN67247.1| hypothetical protein VITISV_008682 [Vitis vinifera]   378   e-150
emb|CAN75478.1| hypothetical protein VITISV_020209 [Vitis vinifera]   384   e-149
gb|KHN17953.1| Retrovirus-related Pol polyprotein from transposo...   380   e-149

>emb|CAN67403.1| hypothetical protein VITISV_025614 [Vitis vinifera]
          Length = 1271

 Score =  434 bits (1116), Expect(2) = e-174
 Identities = 234/514 (45%), Positives = 317/514 (61%), Gaps = 11/514 (2%)
 Frame = -3

Query: 2062 FLRPYNRHKVGFHTSRCVFLGYSNKHKGYRYLQP-NGRIFIAQSVTFDEYSFPFSLNFVT 1886
            ++RPYN++K+ + +S+CVFLGYS+ HKGY  L P  GR+++ + V F E  FPF      
Sbjct: 561  YIRPYNKNKLSYRSSQCVFLGYSSNHKGYMCLNPLTGRLYVTRHVVFHETVFPF------ 614

Query: 1885 SPVSPHTDHISSQLLPDF*ISTLIDISNKVDHTEACSSLVIVPH--IFPNQSPVLES--P 1718
                        Q  PD                   SS+V +P     P  SP + S   
Sbjct: 615  ------------QSTPD-----------------QSSSVVTIPTPAFLPCSSPPVSSLRS 645

Query: 1717 HSSHNSDTPAVAAERITQTNLPSTVEQ-----QNSSPKQAIHH-MQTRAKSGIHKPKKFA 1556
            H++ ++ +P +     +  +LP  ++        S P     H M TRAK+GI K K + 
Sbjct: 646  HTTPSTSSPPLTNMPSSTISLPDLIQVPFADISTSEPHPTNQHPMVTRAKNGISKKKVYF 705

Query: 1555 FLTSSNHKSLEPPCVKEALSSPEWVEAMTAELHALKSNNTWSLVPATSNMHVLGCKWVFK 1376
                S+H S EP    +A+    WV AM  E  AL+ NNTW LVP  SN +++GCKWV+K
Sbjct: 706  ----SSHIS-EPTTFTQAVKDSNWVLAMEKEFSALQRNNTWHLVPPPSNGNIIGCKWVYK 760

Query: 1375 MKMKDDGSTERYKARLVAKGFQQTPGLDYFETFSPVIKLSTIRVILTLAVTYGWDIQQVD 1196
            +K K DG+ +RYKARLVA+GF QT GL+YFETFSPV+K STIR+IL +A+++ W + Q+D
Sbjct: 761  LKYKPDGTVDRYKARLVAQGFTQTLGLBYFETFSPVVKASTIRIILAVALSFNWSVHQLD 820

Query: 1195 INNAFLNGDLQETVYMSQPDGFVNPQLPTHVCKLHKALYGLKQAPRAWFEKLKQALFNWG 1016
            + NAFL+GDL+E V+M QP GF+N Q P+HVCKL+KALYGLKQAPRAW+ KL  +L  WG
Sbjct: 821  VQNAFLHGDLEEHVFMQQPPGFINSQYPSHVCKLNKALYGLKQAPRAWYNKLSTSLLGWG 880

Query: 1015 FQNSRTDTSLFVSTSGGKFVFVLIYVDDILITGYDNTQVLKLVHDLHSQFALKMLGSLRY 836
            FQ SR D+S+F+  S    + +LIYVDDIL+TG  + QV   +  L+S FAL+ LG + Y
Sbjct: 881  FQASRADSSMFIHHSTHDVLILLIYVDDILVTGSSSAQVSSFITRLNSSFALRDLGYVNY 940

Query: 835  FLGFEAHRDSLGIYLTQHKYVMDLLAKTKMLEAKGCDTSMCQNRKLSLNDSSHFDLSTTY 656
            FLG E  R     +L+QHKY  DLL++T ML++K   T     + LS  D   F  +T Y
Sbjct: 941  FLGIEVVRSGTMFHLSQHKYTQDLLSRTAMLDSKPATTPGLLGQTLSHLDGEPFSDATLY 1000

Query: 655  RSTIGALQYLTMTKPDVAFAVNKLSQFLHAPTVT 554
            RST+GALQYLT+T+PD++FAVNK  QF+  PT T
Sbjct: 1001 RSTVGALQYLTLTRPDISFAVNKACQFMATPTTT 1034



 Score =  209 bits (531), Expect(2) = e-174
 Identities = 102/180 (56%), Positives = 133/180 (73%)
 Frame = -1

Query: 555  HWQACKRILRYLTNTPNIGLHFTTATSLTLEAFSDADWAGNIDDMRSTTGYCIFLGGNLI 376
            HW A KRILRYL  T + G+    +TSL +  ++DADWA   DD RST GY IFLG NL+
Sbjct: 1035 HWLAVKRILRYLKGTLSYGIQMQQSTSLDIHGYTDADWASCPDDRRSTGGYGIFLGPNLV 1094

Query: 375  KWISRKQKVVDRTSTESEYRALANAATDILWLQSLFDDLGLTISSCLVLWCDNISAGSLA 196
             W S KQKVV R+S ESEYRALA+A ++++W+Q +  +L L+ SS  +LWCDN SA  LA
Sbjct: 1095 SWSSNKQKVVSRSSAESEYRALASATSEMIWIQYVLQELCLSSSSPPLLWCDNKSAAHLA 1154

Query: 195  SNPVFHQRTKHIKLDVHFVREKVLAKQLVVQ*INTEEQVADILTKALASSKFTQFRDKLT 16
            +NPVFH RTKHI++D+HF+R+ VL KQLV+Q + + EQVADI TK ++SS+F  FR KL+
Sbjct: 1155 ANPVFHARTKHIEMDLHFIRDHVLRKQLVIQYLPSAEQVADIFTKHISSSQFLSFRTKLS 1214


>emb|CAN59952.1| hypothetical protein VITISV_006720 [Vitis vinifera]
          Length = 1365

 Score =  432 bits (1112), Expect(2) = e-166
 Identities = 226/504 (44%), Positives = 309/504 (61%), Gaps = 1/504 (0%)
 Frame = -3

Query: 2062 FLRPYNRHKVGFHTSRCVFLGYSNKHKGYRYLQP-NGRIFIAQSVTFDEYSFPFSLNFVT 1886
            F+RPYN HK+ + + +CVFLGYS  HKGY  L    GR++++  V FDE  FPF+ N  +
Sbjct: 666  FIRPYNNHKLQYRSLKCVFLGYSLHHKGYLCLDNLTGRVYVSPHVVFDETQFPFAQNISS 725

Query: 1885 SPVSPHTDHISSQLLPDF*ISTLIDISNKVDHTEACSSLVIVPHIFPNQSPVLESPHSSH 1706
            SP    +D     ++P   +S+     +      + +S        PN +  L  P    
Sbjct: 726  SPSKDASDE---SVIPAIIVSSNPSTLSFHGSNHSMAS--------PNLTSALTHPTPPT 774

Query: 1705 NSDTPAVAAERITQTNLPSTVEQQNSSPKQAIHHMQTRAKSGIHKPKKFAFLTSSNHKSL 1526
            ++ T     E + +  +    +QQ   P   +    TR+ SGI K K    L +   K  
Sbjct: 775  DTPTTRSLREXVLEAEVTLPAQQQVVVPPPRV---TTRSMSGITKRKHIFNLAA--FKIS 829

Query: 1525 EPPCVKEALSSPEWVEAMTAELHALKSNNTWSLVPATSNMHVLGCKWVFKMKMKDDGSTE 1346
            EP  +K+A+  P W EAM  E+ AL  N TW LV    +++++GCKWV+K+K K DGS +
Sbjct: 830  EPTTLKQAIKDPNWAEAMQTEIAALHKNQTWDLVDPPKDVNIIGCKWVYKLKYKPDGSVD 889

Query: 1345 RYKARLVAKGFQQTPGLDYFETFSPVIKLSTIRVILTLAVTYGWDIQQVDINNAFLNGDL 1166
            RYKARLVA+GF QT GLDYFETFSPV+K +TIR++LT+A++Y W+++Q+D+ N FLNGDL
Sbjct: 890  RYKARLVARGFNQTFGLDYFETFSPVVKAATIRIVLTIALSYRWELRQLDVQNXFLNGDL 949

Query: 1165 QETVYMSQPDGFVNPQLPTHVCKLHKALYGLKQAPRAWFEKLKQALFNWGFQNSRTDTSL 986
             E VYM+ P GF++P  P  VCKL KALYGLKQ+PRAWF K   AL +WGF +SR D+S+
Sbjct: 950  VEQVYMAXPPGFLHPNHPNKVCKLKKALYGLKQSPRAWFTKXSSALLSWGFNSSRXDSSM 1009

Query: 985  FVSTSGGKFVFVLIYVDDILITGYDNTQVLKLVHDLHSQFALKMLGSLRYFLGFEAHRDS 806
            FV       + VL+YVDDI++TG     + +L+H LHS FAL+ LG L YFLG E   D 
Sbjct: 1010 FVHFGTHSTLIVLVYVDDIIVTGSSPVLIQQLIHKLHSLFALRDLGQLSYFLGIEVTYDG 1069

Query: 805  LGIYLTQHKYVMDLLAKTKMLEAKGCDTSMCQNRKLSLNDSSHFDLSTTYRSTIGALQYL 626
              ++L+Q KY+ DLL +T ML++K   T       LS  D    D  T YRS +GALQY 
Sbjct: 1070 GSMHLSQSKYITDLLQRTSMLDSKAAATPGTVGLSLSQFDGDLMDDVTMYRSVVGALQYA 1129

Query: 625  TMTKPDVAFAVNKLSQFLHAPTVT 554
            T+T+PD+AF+VNK  QF+H PT T
Sbjct: 1130 TLTRPDIAFSVNKACQFMHRPTST 1153



 Score =  183 bits (464), Expect(2) = e-166
 Identities = 88/179 (49%), Positives = 122/179 (68%)
 Frame = -1

Query: 555  HWQACKRILRYLTNTPNIGLHFTTATSLTLEAFSDADWAGNIDDMRSTTGYCIFLGGNLI 376
            HW + KRILRYL  T   GL    +   T++A++DADW    DD RS++GY ++LG NL+
Sbjct: 1154 HWSSVKRILRYLKGTTTHGLXLQPSAHFTVQAYTDADWGAQPDDRRSSSGYLVYLGNNLV 1213

Query: 375  KWISRKQKVVDRTSTESEYRALANAATDILWLQSLFDDLGLTISSCLVLWCDNISAGSLA 196
             W + KQKVV  +S ESEYR LA A  +I+W Q+L  +L ++++S   L+ DNISA  +A
Sbjct: 1214 SWTASKQKVVSXSSAESEYRGLAIATXEIIWTQALLSELCISJTSIPTLYYDNISAYYMA 1273

Query: 195  SNPVFHQRTKHIKLDVHFVREKVLAKQLVVQ*INTEEQVADILTKALASSKFTQFRDKL 19
             NPVFH RTKHI++D+HF+R++VL  +L +Q I + +Q ADILTK L SS+F   R  L
Sbjct: 1274 KNPVFHARTKHIEIDLHFIRDQVLHNKLQLQYIPSTDQPADILTKHLTSSRFLSLRSHL 1332


>emb|CCH50966.1| T4.5 [Malus x robusta]
          Length = 1670

 Score =  411 bits (1057), Expect(2) = e-161
 Identities = 230/516 (44%), Positives = 315/516 (61%), Gaps = 16/516 (3%)
 Frame = -3

Query: 2062 FLRPYNRHKVGFHTSRCVFLGYSNKHKGYRYLQP-NGRIFIAQSVTFDEYSFPFSLNFVT 1886
            +L+PY+R K+ F + +CVFLGYS  H GYR   P + R++I++ V FDE  FP+    ++
Sbjct: 965  WLQPYSRDKLDFKSKQCVFLGYSLNHSGYRCWDPISNRLYISRHVVFDESLFPYKS--LS 1022

Query: 1885 SPVSPHTDHISSQLLPDF*ISTLIDISNKVDHTEACSSL----VIVPHIFPNQSPVLESP 1718
            S  S H+  +SS L P   +   + +S+    +   ++L       P IF   +      
Sbjct: 1023 SQASHHSPCVSSPLHPPMSLHLPLPVSHLEQQSSPAAALEGRNASPPSIFSTAAHTTIPS 1082

Query: 1717 HSSHNSDTPAVAAERITQTNLPSTVEQQNSSPKQAIHHMQTRAKSGIHKPKKFAFLTSSN 1538
             +  +  TP V++       LP  +           H M TRAK+GIHKPK F   T++ 
Sbjct: 1083 SAQESLHTPPVSSSPAEPPPLPPPIPVNT-------HTMITRAKAGIHKPKVF---TATK 1132

Query: 1537 HK------SLE-----PPCVKEALSSPEWVEAMTAELHALKSNNTWSLVPATSNMHVLGC 1391
            H+      SL      P    +A  S  W+EAM  E  AL+S  TW LVP  S  +++GC
Sbjct: 1133 HQLPSTVDSLTALPPTPSTFLQASKSSHWMEAMQFEFQALQSTGTWELVPNHSTYNIVGC 1192

Query: 1390 KWVFKMKMKDDGSTERYKARLVAKGFQQTPGLDYFETFSPVIKLSTIRVILTLAVTYGWD 1211
            KWVFK+K K DG+ ERYKARLVAKGF Q  GLD+ ETFSPV K +TIR++L++AV+Y W 
Sbjct: 1193 KWVFKVKHKPDGTIERYKARLVAKGFHQQEGLDFSETFSPVAKPTTIRILLSIAVSYYWF 1252

Query: 1210 IQQVDINNAFLNGDLQETVYMSQPDGFVNPQLPTHVCKLHKALYGLKQAPRAWFEKLKQA 1031
            I Q+D++NAFL+G L+E VYM QP GFV+P  P HVCKL K+LYGLKQAPRAW+E    A
Sbjct: 1253 IHQLDVSNAFLHGHLKEDVYMVQPPGFVDPSKPHHVCKLRKSLYGLKQAPRAWYEAFYTA 1312

Query: 1030 LFNWGFQNSRTDTSLFVSTSGGKFVFVLIYVDDILITGYDNTQVLKLVHDLHSQFALKML 851
            + + GF +S +DTSLF+        F+L+YVDDI+ITG   T+   ++  L + F +K L
Sbjct: 1313 ILSLGFSSSHSDTSLFIKRD-TSITFILVYVDDIIITGSSVTECQSIISQLQTMFPVKDL 1371

Query: 850  GSLRYFLGFEAHRDSLGIYLTQHKYVMDLLAKTKMLEAKGCDTSMCQNRKLSLNDSSHFD 671
            G + YFLG E H+   G+ L Q KY +DLL KT ML AK C T +    KL  + +   D
Sbjct: 1372 GDINYFLGIEVHKSDQGLLLHQAKYALDLLKKTDMLGAKPCATPV-STSKLDHSGTLLSD 1430

Query: 670  LSTTYRSTIGALQYLTMTKPDVAFAVNKLSQFLHAP 563
              T+YRST+GALQYLT T+PD+AFAVN++ Q++H+P
Sbjct: 1431 -PTSYRSTVGALQYLTWTRPDLAFAVNQVCQYMHSP 1465



 Score =  186 bits (473), Expect(2) = e-161
 Identities = 95/187 (50%), Positives = 126/187 (67%)
 Frame = -1

Query: 564  QQLHWQACKRILRYLTNTPNIGLHFTTATSLTLEAFSDADWAGNIDDMRSTTGYCIFLGG 385
            Q +H QA KRILRYL  T ++GL FT   S  L A+SDADWAG   D RST+GYC+FLG 
Sbjct: 1466 QTIHLQAVKRILRYLKGTVDLGLWFTKG-SQCLTAWSDADWAGCPVDRRSTSGYCVFLGS 1524

Query: 384  NLIKWISRKQKVVDRTSTESEYRALANAATDILWLQSLFDDLGLTISSCLVLWCDNISAG 205
            NLI W ++KQ  V R+STE+EYR+LAN A +I W+  +  D+   +    V++CDN S  
Sbjct: 1525 NLISWSAKKQATVARSSTEAEYRSLANTAAEITWVCKILHDISFPLLKTPVIYCDNKSVI 1584

Query: 204  SLASNPVFHQRTKHIKLDVHFVREKVLAKQLVVQ*INTEEQVADILTKALASSKFTQFRD 25
            +LA NPVFH RTKH+++D H++REKVL   + VQ + +  Q+ADI TK LA+ +F     
Sbjct: 1585 ALAFNPVFHARTKHVEIDYHYIREKVLLGHIGVQHVASLLQIADIFTKPLAADRFAALTS 1644

Query: 24   KLTRTSP 4
            KL+  SP
Sbjct: 1645 KLSVRSP 1651


>emb|CAN81355.1| hypothetical protein VITISV_039158 [Vitis vinifera]
          Length = 1402

 Score =  412 bits (1059), Expect(2) = e-160
 Identities = 220/504 (43%), Positives = 304/504 (60%), Gaps = 1/504 (0%)
 Frame = -3

Query: 2062 FLRPYNRHKVGFHTSRCVFLGYSNKHKGYRYLQP-NGRIFIAQSVTFDEYSFPFSLNFVT 1886
            F+RPYN HK+ + + +CVFLGYS  HKGY  L    GR++++  V FDE  FPF+ N  +
Sbjct: 716  FIRPYNNHKLQYRSLKCVFLGYSLHHKGYLCLDNLTGRVYVSPHVVFDETQFPFAQNISS 775

Query: 1885 SPVSPHTDHISSQLLPDF*ISTLIDISNKVDHTEACSSLVIVPHIFPNQSPVLESPHSSH 1706
            SP    +D     ++P   +S+     +      + +S        PN +  L  P S  
Sbjct: 776  SPSKDASDE---SIIPXIIVSSNPSTLSFHGSNHSMAS--------PNLTSTLTHPTSPT 824

Query: 1705 NSDTPAVAAERITQTNLPSTVEQQNSSPKQAIHHMQTRAKSGIHKPKKFAFLTSSNHKSL 1526
            ++ T   + E + +  +    +QQ   P   +    TR+ SGI K K    L +S  K  
Sbjct: 825  DTPTTRXSREPVLEAEVXLPAQQQVVVPPPRV---TTRSMSGITKRKPIFNLAAS--KIS 879

Query: 1525 EPPCVKEALSSPEWVEAMTAELHALKSNNTWSLVPATSNMHVLGCKWVFKMKMKDDGSTE 1346
            EP  +K+A+  P W EAM  E+ AL  N TW LV    +++++GCKWV+K+K K DGS +
Sbjct: 880  EPTTLKQAIKDPNWAEAMHTEIAALHKNQTWDLVDPPKDVNIIGCKWVYKLKYKXDGSVD 939

Query: 1345 RYKARLVAKGFQQTPGLDYFETFSPVIKLSTIRVILTLAVTYGWDIQQVDINNAFLNGDL 1166
            RYKARLVA+GF QT GLDYFETFSPV+K +TIR++LT+ ++Y W+++Q+D          
Sbjct: 940  RYKARLVARGFNQTFGLDYFETFSPVVKAATIRIVLTIXLSYRWELRQLD---------- 989

Query: 1165 QETVYMSQPDGFVNPQLPTHVCKLHKALYGLKQAPRAWFEKLKQALFNWGFQNSRTDTSL 986
               VYM+QP GF++P  P  VCKL KALYGLKQ+PRAWF KL  AL + GF +SRTD+S+
Sbjct: 990  ---VYMAQPPGFLHPNHPNKVCKLKKALYGLKQSPRAWFTKLSSALLSXGFNSSRTDSSM 1046

Query: 985  FVSTSGGKFVFVLIYVDDILITGYDNTQVLKLVHDLHSQFALKMLGSLRYFLGFEAHRDS 806
            FV       + VL+YVDDI++TG     + +L+H LHS FAL+ LG L YFLG E   D 
Sbjct: 1047 FVHFGRHSTLIVLVYVDDIIVTGSSPILIQQLIHKLHSLFALRDLGQLSYFLGIEVTYDG 1106

Query: 805  LGIYLTQHKYVMDLLAKTKMLEAKGCDTSMCQNRKLSLNDSSHFDLSTTYRSTIGALQYL 626
              ++L+Q KY+ DLL +T ML++K   T       LS  D    D  T YRS +GALQY 
Sbjct: 1107 GSLHLSQRKYITDLLQRTSMLDSKAAATPGTVGLSLSQFDGDLMDDVTMYRSVVGALQYA 1166

Query: 625  TMTKPDVAFAVNKLSQFLHAPTVT 554
            T+T+PD+AF++NK  QF+H PT T
Sbjct: 1167 TLTRPDIAFSINKACQFMHRPTST 1190



 Score =  184 bits (467), Expect(2) = e-160
 Identities = 90/179 (50%), Positives = 123/179 (68%)
 Frame = -1

Query: 555  HWQACKRILRYLTNTPNIGLHFTTATSLTLEAFSDADWAGNIDDMRSTTGYCIFLGGNLI 376
            HW + KRILRYL  T   GL    +   T++A++DADW    DD RS++GY ++LG NL+
Sbjct: 1191 HWSSVKRILRYLKGTITHGLLLQPSAHFTIQAYTDADWGAQPDDRRSSSGYLVYLGNNLV 1250

Query: 375  KWISRKQKVVDRTSTESEYRALANAATDILWLQSLFDDLGLTISSCLVLWCDNISAGSLA 196
             W + KQKVV R+S ESEYR LA A  +I+W Q+L  +L ++I+S   L+ DNISA  +A
Sbjct: 1251 SWTASKQKVVSRSSAESEYRGLAIATAEIIWTQALLRELCISITSIPTLYYDNISAYYMA 1310

Query: 195  SNPVFHQRTKHIKLDVHFVREKVLAKQLVVQ*INTEEQVADILTKALASSKFTQFRDKL 19
             NPVFH RTKHI++D+HF+R++VL  +L +Q I + +Q ADILTK L SS+F   R  L
Sbjct: 1311 KNPVFHARTKHIEIDLHFIRDQVLHNKLQLQYIPSTDQPADILTKHLTSSRFLSLRSHL 1369


>gb|AAN06870.1| Putative gag-pol polyprotein [Oryza sativa Japonica Group]
            gi|108706314|gb|ABF94109.1| retrotransposon protein,
            putative, Ty1-copia subclass [Oryza sativa Japonica
            Group]
          Length = 1247

 Score =  395 bits (1014), Expect(2) = e-158
 Identities = 234/574 (40%), Positives = 323/574 (56%), Gaps = 74/574 (12%)
 Frame = -3

Query: 2059 LRPYNRHKVGFHTSRCVFLGYSNKHKGYRYLQPN-GRIFIAQSVTFDEYSFPF-SLN--- 1895
            LRPYN  K+ F + +C FLGYS  HKG++ L P+ GR++I+  V FDE  FPF SL+   
Sbjct: 488  LRPYNARKLQFRSKQCTFLGYSPLHKGFKCLDPSTGRVYISHDVIFDENVFPFASLHPNA 547

Query: 1894 --FVTSPVSPHTDHISSQLLPDF--*ISTLIDISNKVDHTEACSSLVIVPHIFPN----- 1742
               + S +     H+   ++P      +T+ ++     +  +   L +  +   N     
Sbjct: 548  GAKLRSEILLLPSHLDIPIIPGVQQMSTTVANVPTNPANQISGDELSLQENSAANNAAPD 607

Query: 1741 ---------QSPVLESPHSS-------------------------HNSDTPAVAAERITQ 1664
                     + P  +SPH+S                         H   TPA +   +  
Sbjct: 608  GADAATAATKDPAADSPHTSDAASSSVLQRRVEATAESSCSPDRLHVELTPAHSPVAMQS 667

Query: 1663 TNLPSTVEQQNS---------------SPKQAIHHM----QTRAKSGIHKPKKFA----- 1556
             +  S     NS                 +Q  HH+     TR +SGI K K +      
Sbjct: 668  PDATSPTASSNSQEPSTSLDASVAGEVDTQQQQHHVISRPATRLQSGIRKEKVYTDGTVK 727

Query: 1555 FLTSSNHKSLEPPCVKEALSSPEWVEAMTAELHALKSNNTWSLVPATSNMHVLGCKWVFK 1376
            + T+    + EP  + +AL    W +AM AE  AL++N TW LVP     +V+ CKWV+K
Sbjct: 728  YRTTFLTVTGEPENLDDALKDNNWKKAMDAEFMALQNNKTWHLVPPQKGRNVIDCKWVYK 787

Query: 1375 MKMKDDGSTERYKARLVAKGFQQTPGLDYFETFSPVIKLSTIRVILTLAVTYGWDIQQVD 1196
            +K K DGS +RYKARLVAKGF+Q  G+DY +TFSPV+K +TIR+IL++AV+ GW ++Q+D
Sbjct: 788  IKRKQDGSLDRYKARLVAKGFKQRYGIDYEDTFSPVVKAATIRIILSIAVSKGWCMRQLD 847

Query: 1195 INNAFLNGDLQETVYMSQPDGFVNPQLPTHVCKLHKALYGLKQAPRAWFEKLKQALFNWG 1016
            + NAFL+G L+E VYM QP G+ +  LP +VCKL KALYGLKQAPRAW+ +L + L++ G
Sbjct: 848  VQNAFLHGVLEEEVYMKQPPGYEDSSLPGYVCKLDKALYGLKQAPRAWYSRLSKKLYDMG 907

Query: 1015 FQNSRTDTSLFVSTSGGKFVFVLIYVDDILITGYDNTQVLKLVHDLHSQFALKMLGSLRY 836
            FQ S+ DTSLF    G   +FVLIYVDDI++T      V  L+ DL  +FALK LG L Y
Sbjct: 908  FQGSKADTSLFFYNKGDLIIFVLIYVDDIIVTSSRQEAVPALLRDLQKEFALKDLGDLHY 967

Query: 835  FLGFEAHRDSLGIYLTQHKYVMDLLAKTKMLEAKGCDTSMCQNRKLSLNDSSHF--DLST 662
            FLG E  + S GI LTQ KYV DLL +  M + K   T +  + KLS+N+      + +T
Sbjct: 968  FLGIEVTKVSGGIVLTQDKYVNDLLRRVNMFDCKPVSTPLSTSEKLSINEGDPLGPNDAT 1027

Query: 661  TYRSTIGALQYLTMTKPDVAFAVNKLSQFLHAPT 560
             YRS +GALQYLT+T+PD+AF VNK+ QFLHAPT
Sbjct: 1028 HYRSVVGALQYLTLTRPDIAFPVNKVCQFLHAPT 1061



 Score =  192 bits (489), Expect(2) = e-158
 Identities = 92/179 (51%), Positives = 124/179 (69%)
 Frame = -1

Query: 555  HWQACKRILRYLTNTPNIGLHFTTATSLTLEAFSDADWAGNIDDMRSTTGYCIFLGGNLI 376
            HW A KRILRYL     +GL  + + S+ + A+SDADWAG++DD RST G+ +FLG NL+
Sbjct: 1064 HWAAVKRILRYLKQCTRLGLKLSKSRSMLVSAYSDADWAGSLDDRRSTGGFAVFLGDNLV 1123

Query: 375  KWISRKQKVVDRTSTESEYRALANAATDILWLQSLFDDLGLTISSCLVLWCDNISAGSLA 196
             W +RKQ  V R+STESEY+ALANA  +I+W+Q+L  +L +   S   LWCDN+ A  L+
Sbjct: 1124 SWSARKQATVSRSSTESEYKALANATAEIMWVQTLLAELQVESPSMAKLWCDNLGAKYLS 1183

Query: 195  SNPVFHQRTKHIKLDVHFVREKVLAKQLVVQ*INTEEQVADILTKALASSKFTQFRDKL 19
            +NPVFH RTKHI++D HFVRE+V  K L +  + T +QVAD  TKAL+  +   F+  L
Sbjct: 1184 ANPVFHARTKHIEVDYHFVRERVSRKLLEIDFVPTGDQVADGFTKALSVRQLENFKYNL 1242


>gb|AAC02664.1| polyprotein [Arabidopsis thaliana]
          Length = 1451

 Score =  385 bits (990), Expect(2) = e-157
 Identities = 235/563 (41%), Positives = 312/563 (55%), Gaps = 62/563 (11%)
 Frame = -3

Query: 2062 FLRPYNRHKVGFHTSRCVFLGYSNKHKGYRYL-QPNGRIFIAQSVTFDEYSFPFS----- 1901
            +LRPY  HK+   +  CV LGYS     Y  L +  GR++ ++ V F E SFPFS     
Sbjct: 700  WLRPYTAHKLDNRSVPCVLLGYSLSQSAYLCLDRATGRVYTSRHVQFAESSFPFSTTSPS 759

Query: 1900 --------LNFVTSPVS--------------------PHTDHISSQ-------LLPDF*I 1826
                    L+  T PVS                    PH     S+       L P   +
Sbjct: 760  VTPPSDPPLSQDTRPVSVPLLARPLTTAPPSSPSCSAPHRSPSQSENLSPPAPLQPSLSL 819

Query: 1825 STLIDISNK-------VDHTEACSSLVIVPHIFPN------QSPVLESPHSSH---NSDT 1694
            S    I++        V H          P + P       QSP   SPHSS    NS  
Sbjct: 820  SPTSPITSPSLSEESLVGHNSETGPTGSSPPLSPQPQRPQPQSPQSTSPHSSSPQPNSPN 879

Query: 1693 PAVAAERITQT--NLPSTVEQQNSSPKQAIHHMQTRAKSGIHKPK-KFAFLTSSNH--KS 1529
            P  +   +T T  + PS     N +P    H M+TR+K+ I KP  KFA L +     K 
Sbjct: 880  PQHSPRSLTPTLTSSPSPSPPPNPNPPPIQHTMRTRSKNNIVKPNPKFANLATKPTPLKP 939

Query: 1528 LEPPCVKEALSSPEWVEAMTAELHALKSNNTWSLVPATSNMHVLGCKWVFKMKMKDDGST 1349
            + P  V EAL  P W +AM  E++A   N T+ LVP   N +V+GCKWVF +K   +G  
Sbjct: 940  IIPKTVVEALLDPNWRQAMCDEINAQTRNGTFDLVPPAPNQNVVGCKWVFTLKYLSNGVL 999

Query: 1348 ERYKARLVAKGFQQTPGLDYFETFSPVIKLSTIRVILTLAVTYGWDIQQVDINNAFLNGD 1169
            +RYKARLVAKGF Q  G D+ ETFSPVIK +T+R +L +AV+ GW I+Q+D+NNAFL G 
Sbjct: 1000 DRYKARLVAKGFHQQYGHDFKETFSPVIKSTTVRSVLHIAVSKGWSIRQIDVNNAFLQGT 1059

Query: 1168 LQETVYMSQPDGFVNPQLPTHVCKLHKALYGLKQAPRAWFEKLKQALFNWGFQNSRTDTS 989
            L + VY++QP GFV+     HVC+L+KALYGLKQAPRAW+++L+  L   GF NS  DTS
Sbjct: 1060 LSDEVYVTQPPGFVDKDNAHHVCRLYKALYGLKQAPRAWYQELRSYLLTQGFVNSVADTS 1119

Query: 988  LFVSTSGGKFVFVLIYVDDILITGYDNTQVLKLVHDLHSQFALKMLGSLRYFLGFEAHRD 809
            LF        ++VL+YVDD+LITG D   + + + +L ++F+LK LG + YFLG EA R 
Sbjct: 1120 LFTLRHERTILYVLVYVDDMLITGSDTNIITRFIANLAARFSLKDLGEMSYFLGIEATRT 1179

Query: 808  SLGIYLTQHKYVMDLLAKTKMLEAKGCDTSMCQNRKLSLNDSSHFDLSTTYRSTIGALQY 629
            S G++L Q +YV+DLL KT ML A    T M    KLSL      D  + YR+ +G+LQY
Sbjct: 1180 SKGLHLMQKRYVLDLLEKTNMLAAHPVLTPMSPTPKLSLTSGKPLDKPSEYRAVLGSLQY 1239

Query: 628  LTMTKPDVAFAVNKLSQFLHAPT 560
            L  T+PD+A+AVN+LSQ++H PT
Sbjct: 1240 LLFTRPDIAYAVNRLSQYMHCPT 1262



 Score =  199 bits (506), Expect(2) = e-157
 Identities = 99/180 (55%), Positives = 127/180 (70%)
 Frame = -1

Query: 558  LHWQACKRILRYLTNTPNIGLHFTTATSLTLEAFSDADWAGNIDDMRSTTGYCIFLGGNL 379
            LHWQA KRILRYL  TP+ G+     T LTL A+SDADWAG+ID+  ST  Y ++LG N 
Sbjct: 1264 LHWQAAKRILRYLAGTPSHGIFIRADTPLTLHAYSDADWAGDIDNYNSTNAYILYLGSNP 1323

Query: 378  IKWISRKQKVVDRTSTESEYRALANAATDILWLQSLFDDLGLTISSCLVLWCDNISAGSL 199
            I W S+KQK V R+STE+EYRA+ANA ++I W+ SL  +LG+T+SS  V++CDN+ A  L
Sbjct: 1324 ISWSSKKQKGVARSSTEAEYRAVANATSEIRWVCSLLTELGITLSSPPVVYCDNVGATYL 1383

Query: 198  ASNPVFHQRTKHIKLDVHFVREKVLAKQLVVQ*INTEEQVADILTKALASSKFTQFRDKL 19
            ++NPVFH R KHI LD HFVRE V A  L V  ++T++Q+AD LTK L    FT    K+
Sbjct: 1384 SANPVFHSRMKHIALDFHFVRESVQAGALRVTHVSTKDQLADALTKPLPRQPFTTLISKI 1443


>pir||T02087 gag/pol polyprotein - maize retrotransposon Hopscotch
            gi|531389|gb|AAA57005.1| copia-like retrotransposon
            Hopscotch polyprotein [Zea mays]
          Length = 1439

 Score =  387 bits (995), Expect(2) = e-157
 Identities = 236/558 (42%), Positives = 318/558 (56%), Gaps = 58/558 (10%)
 Frame = -3

Query: 2059 LRPYNRHKVGFHTSRCVFLGYSNKHKGYRYLQ-PNGRIFIAQSVTFDEYSFPF-SLNF-- 1892
            LRPYN+HK+ F ++RCVFLGYSN HKG++ L    GRI+I++ V FDE+ FPF SLN   
Sbjct: 690  LRPYNQHKLQFRSTRCVFLGYSNMHKGFKCLDISTGRIYISRDVVFDEHVFPFASLNKNA 749

Query: 1891 ---VTSPVS--PH--------TDHI-----SSQLLPDF*ISTLIDIS------------- 1805
                TS V   PH        TDH      SS  LP      L   S             
Sbjct: 750  GVKYTSEVLLLPHDSCGNNMLTDHANNLPGSSSPLPFLAQHFLQGNSEVPTSNNTAMALP 809

Query: 1804 ----NKVDHTEACSSLVIVPHIFPNQSPVLES----PHSSHNSDTPAVAAERIT------ 1667
                N+V    A     +VP   P  + V  +    P +   S  P VA E +T      
Sbjct: 810  ASGPNEVSVPPALVPSSLVPAASPAPTGVSANAEPAPEADSLSSGPPVATESVTGVPDAD 869

Query: 1666 ---QTNLPSTVEQQNSSPKQAIHHMQTRAKSGIHKPKKFAFLT----SSNHKSLEPPCVK 1508
               Q    S   Q   S   +    +TR + GI KPK+F   T    ++  +  EP  V 
Sbjct: 870  PLLQAPGSSVAHQTPDSAPLSAAAPRTRLQHGISKPKQFTDGTVRYGNAAARITEPSSVS 929

Query: 1507 EALSSPEWVEAMTAELHALKSNNTWSLVPATSNMHVLGCKWVFKMKMKDDGSTERYKARL 1328
            EAL+ P+W  AM AE  AL+ NNTW+LVP     +++ CKWVFK+K   DGS +R KARL
Sbjct: 930  EALADPQWRAAMEAEFQALQKNNTWTLVPPDRTRNLIDCKWVFKVKYNADGSIDRLKARL 989

Query: 1327 VAKGFQQTPGLDYFETFSPVIKLSTIRVILTLAVTYGWDIQQVDINNAFLNGDLQETVYM 1148
            VAKGF+Q  G+DY +TFSPV+K STIR++L+LAV+  W ++Q+D+ NAFL+G L+ETVYM
Sbjct: 990  VAKGFKQQYGIDYDDTFSPVVKHSTIRLVLSLAVSQKWSLRQLDVQNAFLHGILEETVYM 1049

Query: 1147 SQPDGFVNPQLPTHVCKLHKALYGLKQAPRAWFEKLKQALFNWGFQNSRTDTSLFVSTSG 968
             QP GF +   P + C L K+LYGLKQ PRAW+ +L + L + GF  S+ D SLF+  + 
Sbjct: 1050 KQPPGFADTTHPNYHCHLQKSLYGLKQRPRAWYSRLSEKLQSLGFVPSKADVSLFIYNAH 1109

Query: 967  GKFVFVLIYVDDILITGYDNTQVLKLVHDLHSQFALKMLGSLRYFLGFEAHRDSLGIYLT 788
               +++L+YVDDI+ITG     +  ++  L   FA+K LG L YFLG E HR   G+ L 
Sbjct: 1110 STAIYILVYVDDIIITGSSPHAIDNVLAKLKDDFAIKDLGDLHYFLGIEVHRKGDGLLLC 1169

Query: 787  QHKYVMDLLAKTKMLEAKGCDTSMCQNRKLSLNDSSHF--DLSTTYRSTIGALQYLTMTK 614
            Q KY  DLL +  M   K   T +  + KLS +  +    + +T YRS +GALQYLT+T+
Sbjct: 1170 QEKYARDLLKRVGMECCKPVHTPVATSEKLSASAGTLLSPEETTKYRSVVGALQYLTLTR 1229

Query: 613  PDVAFAVNKLSQFLHAPT 560
            PD+++A+N++ QFLHAPT
Sbjct: 1230 PDLSYAINRVCQFLHAPT 1247



 Score =  197 bits (501), Expect(2) = e-157
 Identities = 94/177 (53%), Positives = 128/177 (72%)
 Frame = -1

Query: 558  LHWQACKRILRYLTNTPNIGLHFTTATSLTLEAFSDADWAGNIDDMRSTTGYCIFLGGNL 379
            LHW A KRILR + +T  +GL    + SL L AFSDADWAG  DD +ST GY +FLG NL
Sbjct: 1249 LHWTAVKRILRNIQHTIGLGLTIRPSLSLMLSAFSDADWAGCPDDRKSTGGYALFLGPNL 1308

Query: 378  IKWISRKQKVVDRTSTESEYRALANAATDILWLQSLFDDLGLTISSCLVLWCDNISAGSL 199
            I W S+KQ  V R+STE+EY+A+ANA  +++WLQSL  +LG+ ++    LWCDN+ A  L
Sbjct: 1309 ISWNSKKQSTVSRSSTEAEYKAMANATAEVIWLQSLLHELGIRLTGIPRLWCDNLGATYL 1368

Query: 198  ASNPVFHQRTKHIKLDVHFVREKVLAKQLVVQ*INTEEQVADILTKALASSKFTQFR 28
            +S P+F+ RTKHI++D HFVR++VL+K+L ++ I+T +QVAD  TKAL   +  +FR
Sbjct: 1369 SSKPIFNARTKHIEVDFHFVRDRVLSKKLDIRLISTNDQVADGFTKALTIGRLNEFR 1425


>gb|AAC02669.1| polyprotein [Arabidopsis thaliana]
          Length = 1451

 Score =  388 bits (996), Expect(2) = e-156
 Identities = 236/563 (41%), Positives = 313/563 (55%), Gaps = 62/563 (11%)
 Frame = -3

Query: 2062 FLRPYNRHKVGFHTSRCVFLGYSNKHKGYRYL-QPNGRIFIAQSVTFDEYSFPFS----- 1901
            +LRPY  HK+   +  CV LGYS     Y  L +  GR++ ++ V F E SFPFS     
Sbjct: 700  WLRPYTAHKLDNRSVPCVLLGYSLSQSAYLCLDRATGRVYTSRHVQFAESSFPFSTTSPS 759

Query: 1900 --------LNFVTSPVS--------------------PHTDHISSQ-------LLPDF*I 1826
                    L+  T PVS                    PH     S+       L P   +
Sbjct: 760  VTPPSDPPLSQDTRPVSVPLLARPLTTAPPSSPSCSAPHRSPSQSENLSPPAPLQPSLSL 819

Query: 1825 STLIDISNK-------VDHTEACSSLVIVPHIFPN------QSPVLESPHSSH---NSDT 1694
            S    I++        V H          P + P       QSP   SPHSS    NS  
Sbjct: 820  SPTSPITSPSLSEESLVGHNSETGPTGSSPPLSPQPQRPQPQSPQSTSPHSSSPQPNSPN 879

Query: 1693 PAVAAERITQT--NLPSTVEQQNSSPKQAIHHMQTRAKSGIHKPK-KFAFLTSSNH--KS 1529
            P  +   +T T  + PS     N +P    H M+TR+K+ I KP  KFA L +     K 
Sbjct: 880  PQHSPRSLTPTLTSSPSPSPPPNPNPPPIQHTMRTRSKNNIVKPNPKFANLATKPTPLKP 939

Query: 1528 LEPPCVKEALSSPEWVEAMTAELHALKSNNTWSLVPATSNMHVLGCKWVFKMKMKDDGST 1349
            + P  V EAL  P W +AM  E++A   N T+ LVP   N +V+GCKWVF +K   +G  
Sbjct: 940  IIPKTVVEALLDPNWRQAMCDEINAQTRNGTFDLVPPAPNQNVVGCKWVFTLKYLSNGVL 999

Query: 1348 ERYKARLVAKGFQQTPGLDYFETFSPVIKLSTIRVILTLAVTYGWDIQQVDINNAFLNGD 1169
            +RYKARLVAKGF Q  G D+ ETFSPVIKL+T+R +L +AV+ GW I+Q+D+NNAFL G 
Sbjct: 1000 DRYKARLVAKGFHQQYGHDFKETFSPVIKLTTVRSVLHIAVSKGWSIRQIDVNNAFLQGT 1059

Query: 1168 LQETVYMSQPDGFVNPQLPTHVCKLHKALYGLKQAPRAWFEKLKQALFNWGFQNSRTDTS 989
            L + VY++QP GFV+     HVC+L+KALYGLKQAPRAW+++L+  L   GF NS  DTS
Sbjct: 1060 LSDEVYVTQPPGFVDKDNAHHVCRLYKALYGLKQAPRAWYQELRSYLLTQGFVNSVADTS 1119

Query: 988  LFVSTSGGKFVFVLIYVDDILITGYDNTQVLKLVHDLHSQFALKMLGSLRYFLGFEAHRD 809
            LF        ++VL+YVDD+LITG D   + + + +L ++F+LK LG + YFLG EA R 
Sbjct: 1120 LFTLRHERTILYVLVYVDDMLITGSDTNIITRFIANLAARFSLKDLGEMSYFLGIEATRT 1179

Query: 808  SLGIYLTQHKYVMDLLAKTKMLEAKGCDTSMCQNRKLSLNDSSHFDLSTTYRSTIGALQY 629
            S G++L Q +YV+DLL KT ML A    T M    KLSL      D  + YR+ +G+LQY
Sbjct: 1180 SKGLHLMQKRYVLDLLEKTNMLAAHPVLTPMSPTPKLSLTSGKPLDKPSEYRAVLGSLQY 1239

Query: 628  LTMTKPDVAFAVNKLSQFLHAPT 560
            L  T+PD+A+AVN+LSQ++H PT
Sbjct: 1240 LLFTRPDIAYAVNRLSQYMHCPT 1262



 Score =  196 bits (497), Expect(2) = e-156
 Identities = 98/180 (54%), Positives = 126/180 (70%)
 Frame = -1

Query: 558  LHWQACKRILRYLTNTPNIGLHFTTATSLTLEAFSDADWAGNIDDMRSTTGYCIFLGGNL 379
            LHWQA KRILRYL  TP+ G+     T LTL A+SDADWAG+ID+  ST  Y ++LG N 
Sbjct: 1264 LHWQAAKRILRYLAGTPSHGIFIRADTPLTLHAYSDADWAGDIDNYNSTNAYILYLGSNP 1323

Query: 378  IKWISRKQKVVDRTSTESEYRALANAATDILWLQSLFDDLGLTISSCLVLWCDNISAGSL 199
            I W S+KQK V R+STE+EYRA+ANA ++I W+ SL  +LG+T+SS  V++CDN+ A  L
Sbjct: 1324 ISWSSKKQKGVARSSTEAEYRAVANATSEIRWVCSLLTELGITLSSPPVVYCDNVGATYL 1383

Query: 198  ASNPVFHQRTKHIKLDVHFVREKVLAKQLVVQ*INTEEQVADILTKALASSKFTQFRDKL 19
            ++NPVF  R KHI LD HFVRE V A  L V  ++T++Q+AD LTK L    FT    K+
Sbjct: 1384 SANPVFDSRMKHIALDFHFVRESVQAGALRVTHVSTKDQLADALTKPLPRQPFTTLISKI 1443


>gb|AAC02666.1| polyprotein [Arabidopsis thaliana]
          Length = 1451

 Score =  385 bits (990), Expect(2) = e-156
 Identities = 235/563 (41%), Positives = 312/563 (55%), Gaps = 62/563 (11%)
 Frame = -3

Query: 2062 FLRPYNRHKVGFHTSRCVFLGYSNKHKGYRYL-QPNGRIFIAQSVTFDEYSFPFS----- 1901
            +LRPY  HK+   +  CV LGYS     Y  L +  GR++ ++ V F E SFPFS     
Sbjct: 700  WLRPYTAHKLDNRSVPCVLLGYSLSQSAYLCLDRATGRVYTSRHVQFAESSFPFSTTSPS 759

Query: 1900 --------LNFVTSPVS--------------------PHTDHISSQ-------LLPDF*I 1826
                    L+  T PVS                    PH     S+       L P   +
Sbjct: 760  VTPPSDPPLSQDTRPVSVPLLARPLTTAPPSSPSCSAPHRSPSQSENLSPPAPLQPSLSL 819

Query: 1825 STLIDISNK-------VDHTEACSSLVIVPHIFPN------QSPVLESPHSSH---NSDT 1694
            S    I++        V H          P + P       QSP   SPHSS    NS  
Sbjct: 820  SPTSPITSPSLSEESLVGHNSETGPTGSSPPLSPQPQRPQPQSPQSTSPHSSSPQPNSPN 879

Query: 1693 PAVAAERITQT--NLPSTVEQQNSSPKQAIHHMQTRAKSGIHKPK-KFAFLTSSNH--KS 1529
            P  +   +T T  + PS     N +P    H M+TR+K+ I KP  KFA L +     K 
Sbjct: 880  PQHSPRSLTPTLTSSPSPSPPPNPNPPPIQHTMRTRSKNNIVKPNPKFANLATKPTPLKP 939

Query: 1528 LEPPCVKEALSSPEWVEAMTAELHALKSNNTWSLVPATSNMHVLGCKWVFKMKMKDDGST 1349
            + P  V EAL  P W +AM  E++A   N T+ LVP   N +V+GCKWVF +K   +G  
Sbjct: 940  IIPKTVVEALLDPNWRQAMCDEINAQTRNGTFDLVPPAPNQNVVGCKWVFTLKYLSNGVL 999

Query: 1348 ERYKARLVAKGFQQTPGLDYFETFSPVIKLSTIRVILTLAVTYGWDIQQVDINNAFLNGD 1169
            +RYKARLVAKGF Q  G D+ ETFSPVIK +T+R +L +AV+ GW I+Q+D+NNAFL G 
Sbjct: 1000 DRYKARLVAKGFHQQYGHDFKETFSPVIKSTTVRSVLHIAVSKGWSIRQIDVNNAFLQGT 1059

Query: 1168 LQETVYMSQPDGFVNPQLPTHVCKLHKALYGLKQAPRAWFEKLKQALFNWGFQNSRTDTS 989
            L + VY++QP GFV+     HVC+L+KALYGLKQAPRAW+++L+  L   GF NS  DTS
Sbjct: 1060 LSDEVYVTQPPGFVDKDNAHHVCRLYKALYGLKQAPRAWYQELRSYLLTQGFVNSVADTS 1119

Query: 988  LFVSTSGGKFVFVLIYVDDILITGYDNTQVLKLVHDLHSQFALKMLGSLRYFLGFEAHRD 809
            LF        ++VL+YVDD+LITG D   + + + +L ++F+LK LG + YFLG EA R 
Sbjct: 1120 LFTLRHERTILYVLVYVDDMLITGSDTNIITRFIANLAARFSLKDLGEMSYFLGIEATRT 1179

Query: 808  SLGIYLTQHKYVMDLLAKTKMLEAKGCDTSMCQNRKLSLNDSSHFDLSTTYRSTIGALQY 629
            S G++L Q +YV+DLL KT ML A    T M    KLSL      D  + YR+ +G+LQY
Sbjct: 1180 SKGLHLMQKRYVLDLLEKTNMLAAHPVLTPMSPTPKLSLTSGKPLDKPSEYRAVLGSLQY 1239

Query: 628  LTMTKPDVAFAVNKLSQFLHAPT 560
            L  T+PD+A+AVN+LSQ++H PT
Sbjct: 1240 LLFTRPDIAYAVNRLSQYMHCPT 1262



 Score =  196 bits (497), Expect(2) = e-156
 Identities = 98/180 (54%), Positives = 126/180 (70%)
 Frame = -1

Query: 558  LHWQACKRILRYLTNTPNIGLHFTTATSLTLEAFSDADWAGNIDDMRSTTGYCIFLGGNL 379
            LHWQA KRILRYL  TP+ G+     T LTL A+SDADWAG+ID+  ST  Y ++LG N 
Sbjct: 1264 LHWQAAKRILRYLAGTPSHGIFIRADTPLTLHAYSDADWAGDIDNYNSTNAYILYLGSNP 1323

Query: 378  IKWISRKQKVVDRTSTESEYRALANAATDILWLQSLFDDLGLTISSCLVLWCDNISAGSL 199
            I W S+KQK V R+STE+EYRA+ANA ++I W+ SL  +LG+T+SS  V++CDN+ A  L
Sbjct: 1324 ISWSSKKQKGVARSSTEAEYRAVANATSEIRWVCSLLTELGITLSSPPVVYCDNVGATYL 1383

Query: 198  ASNPVFHQRTKHIKLDVHFVREKVLAKQLVVQ*INTEEQVADILTKALASSKFTQFRDKL 19
            ++NPVF  R KHI LD HFVRE V A  L V  ++T++Q+AD LTK L    FT    K+
Sbjct: 1384 SANPVFDSRMKHIALDFHFVRESVQAGALRVTHVSTKDQLADALTKPLPRQPFTTLISKI 1443


>emb|CAN65591.1| hypothetical protein VITISV_042091 [Vitis vinifera]
          Length = 1427

 Score =  398 bits (1023), Expect(2) = e-155
 Identities = 229/540 (42%), Positives = 323/540 (59%), Gaps = 37/540 (6%)
 Frame = -3

Query: 2062 FLRPYNRHKVGFHTSRCVFLGYSNKHKGYRYLQ-PNGRIFIAQSVTFDEYSFPFSLNFVT 1886
            ++RPY+ HK+   +  CVFLGYSN H  Y+ L   + R++I++ V F E+ FPF+ N   
Sbjct: 684  WMRPYSDHKLDKRSKPCVFLGYSNTHNAYKCLDLSSNRVYISRHVQFIEHKFPFASNTTP 743

Query: 1885 SPVSPHTDHISS------QLLPDF*ISTLIDISNKVDHTEACSSLVIVPH--IFPNQSPV 1730
            + +       SS       + P F +   +  S+K    +A S     P+  +  + SP 
Sbjct: 744  TDLBQAISTWSSCSPALAAIQPSFFV---VPTSSKSFPHQAPSCTNTGPNQELISSLSPT 800

Query: 1729 LESPHSSHNSDTPAVAAER---ITQTNLPSTVEQQN-SSPKQAI---------------- 1610
              SP ++ ++   A  A     ++ ++LP + +  N SSP  ++                
Sbjct: 801  SSSPPTTASAPLSACDAPPRYDLSLSSLPVSFDSSNISSPSLSLSPPTQPQGSNPLPEPS 860

Query: 1609 HHMQTRAKSGIHKPKKFAFLTSSNH-------KSLEPPCVKEALSSPEWVEAMTAELHAL 1451
            H + TR+++ IH PK+F    +S H        SLEP    +AL  P+W   M  EL AL
Sbjct: 861  HRIVTRSQNNIHCPKQFPDFKTSFHVTKHPLPXSLEPTTASQALKDPKWCAXMDDELAAL 920

Query: 1450 KSNNTWSLVPATSNMHVLGCKWVFKMKMKDDGSTERYKARLVAKGFQQTPGLDYFETFSP 1271
              N TW LVP  SN +++GCKWVF++K   DGS  RYKARLVAKGF Q PG+DY +TFSP
Sbjct: 921  ARNCTWVLVPPPSNHNIVGCKWVFRIKRNPDGSISRYKARLVAKGFHQRPGVDYHDTFSP 980

Query: 1270 VIKLSTIRVILTLAVTYGWDIQQVDINNAFLNGDLQETVYMSQPDGFVNPQLPTHVCKLH 1091
            V+K +TIRV+L++A++  W I Q+D+NN FL+G L E VYM+QP G+V+   PTHVC+L 
Sbjct: 981  VVKPTTIRVVLSIALSNXWXISQLDVNNXFLHGTLTEDVYMAQPPGYVDQANPTHVCRLQ 1040

Query: 1090 KALYGLKQAPRAWFEKLKQALFNWGFQNSRTDTSLFVSTSGGKFVFVLIYVDDILITGYD 911
            KALYGLKQAPRAW+ +L+  L  +GF NS+ DTSLF+       ++ L+YVDD+L+TG  
Sbjct: 1041 KALYGLKQAPRAWYMELRTFLLTFGFINSKXDTSLFIYQXRSATIYFLVYVDDLLVTGNC 1100

Query: 910  NTQVLKLVHDLHSQFALKMLGSLRYFLGFE-AHRDSLGIYLTQHKYVMDLLAKTKMLEAK 734
            +  + + +  L  +F+LK LG L YFLG E A   S G++L+QH+YV DLLAK  +   K
Sbjct: 1101 SQSIRRFIDALAHRFSLKDLGPLSYFLGVEGAISTSDGMFLSQHQYVRDLLAKFNLEGIK 1160

Query: 733  GCDTSMCQNRKLSLNDSSHFDLSTTYRSTIGALQYLTMTKPDVAFAVNKLSQFLHAPTVT 554
               T M     L+LND S    +T +RS IG LQYL +T+ D+AFAVNKL+QF+HAPT T
Sbjct: 1161 DSSTPMSSTGHLTLNDGSPPXNATQFRSLIGGLQYLQLTRLDIAFAVNKLAQFMHAPTQT 1220



 Score =  180 bits (456), Expect(2) = e-155
 Identities = 88/185 (47%), Positives = 120/185 (64%), Gaps = 12/185 (6%)
 Frame = -1

Query: 561  QLHWQACKRILRYLTNTPNIGLHFT------------TATSLTLEAFSDADWAGNIDDMR 418
            Q HW A KR+LRYL +T ++GL F                 L L A+SDADWAG+ D  +
Sbjct: 1219 QTHWTAAKRLLRYLKHTIHLGLTFRRXQPLHLQAYSDVTPPLDLRAYSDADWAGDPDSYK 1278

Query: 417  STTGYCIFLGGNLIKWISRKQKVVDRTSTESEYRALANAATDILWLQSLFDDLGLTISSC 238
            STT + +FLGG+ I W S+KQK V R+STE+EYRA+A+ A ++ W+  L  +LG+T+   
Sbjct: 1279 STTAFVLFLGGHPISWCSKKQKTVARSSTEAEYRAVASTAAEVTWVSHLLSELGITLQQS 1338

Query: 237  LVLWCDNISAGSLASNPVFHQRTKHIKLDVHFVREKVLAKQLVVQ*INTEEQVADILTKA 58
              ++CDN+SA  L  NP+FH R KH+ LD HFVREKV    L V  +NT+ Q+AD+LTK 
Sbjct: 1339 PTIYCDNLSATYLCVNPLFHSRMKHVALDYHFVREKVXDGSLKVSHVNTQSQLADVLTKP 1398

Query: 57   LASSK 43
            L+ S+
Sbjct: 1399 LSKSR 1403


>gb|AAR88589.1| putative copia-like retrotransposon protein [Oryza sativa Japonica
            Group]
          Length = 1399

 Score =  383 bits (984), Expect(2) = e-154
 Identities = 222/564 (39%), Positives = 315/564 (55%), Gaps = 62/564 (10%)
 Frame = -3

Query: 2059 LRPYNRHKVGFHTSRCVFLGYSNKHKGYRYLQ-PNGRIFIAQSVTFDEYSFPFS------ 1901
            LRPYN+HK+ F + RCVFLGYSN HKG++ L+   GR+++++ VTFDE  FPFS      
Sbjct: 652  LRPYNKHKLAFRSKRCVFLGYSNLHKGFKCLEIATGRVYVSRDVTFDESIFPFSELHSNA 711

Query: 1900 -------LNFVTSPVSPHTDHISSQLLPDF*ISTLIDISNKVDHTEACSSLVIVPHIFPN 1742
                   ++ +   + PH   +  +   +  ++   +++++     A     IV +   N
Sbjct: 712  GARLRAEISLLPPSLVPHLSSLGGE-QNNHVLNYPPNVTDQFGEENAEIGEEIVANGEEN 770

Query: 1741 QSPVLE-----SPHSSHNSDTPAVAAERITQTNLPST------VEQQNSSPKQAIHHMQ- 1598
             +   +     + +     D   VA +   + + P T        +Q+ +P Q  H +Q 
Sbjct: 771  AAAAADENAAAAANGGAQDDVHGVAYDASPEHSSPVTDDAMASAAEQHGNPIQEEHLVQA 830

Query: 1597 -----------TRAKSGIH-----------------------KPKKFAFLTSSNHKSLEP 1520
                         + +G+H                       +PK          KSLE 
Sbjct: 831  SPQTASSTSPSVASSAGVHDDVTTDQSDQTDQAMPEAAVAPIRPKTRLQSGIRKEKSLE- 889

Query: 1519 PCVKEALSSPEWVEAMTAELHALKSNNTWSLVPATSNMHVLGCKWVFKMKMKDDGSTERY 1340
                EA+++  W EAM AE  AL  N TW LVP     +V+ CKWV+K+K K DGS +RY
Sbjct: 890  ----EAVNNKHWKEAMDAEYMALIENKTWHLVPPQKGRNVIDCKWVYKVKRKADGSLDRY 945

Query: 1339 KARLVAKGFQQTPGLDYFETFSPVIKLSTIRVILTLAVTYGWDIQQVDINNAFLNGDLQE 1160
            KARLVAKGF+Q  G+DY +TFSPV+K +TIR++L+LAV+ GW ++Q+D+ NAFL+G L+E
Sbjct: 946  KARLVAKGFKQRYGIDYEDTFSPVVKAATIRIVLSLAVSRGWSLRQLDVKNAFLHGVLEE 1005

Query: 1159 TVYMSQPDGFVNPQLPTHVCKLHKALYGLKQAPRAWFEKLKQALFNWGFQNSRTDTSLFV 980
             VYM QP G+    +P +VCKL KALYGLKQAPRAW+ +L   L   GF  S+ DTSLF 
Sbjct: 1006 EVYMKQPPGYEKKSMPNYVCKLDKALYGLKQAPRAWYSRLSTKLSELGFVPSKADTSLFF 1065

Query: 979  STSGGKFVFVLIYVDDILITGYDNTQVLKLVHDLHSQFALKMLGSLRYFLGFEAHRDSLG 800
               G   +F+LIYVDDI++          L+ +L   FALK LG L YFLG E H+   G
Sbjct: 1066 YKKGQVSIFLLIYVDDIIVASSVPDATSTLLQELSKDFALKDLGDLHYFLGIEVHKVKDG 1125

Query: 799  IYLTQHKYVMDLLAKTKMLEAKGCDTSMCQNRKLSLNDSSHF--DLSTTYRSTIGALQYL 626
            + L+Q KY  DLL +  M E K   T +  + KLS+N+ +      ST YRS +GALQYL
Sbjct: 1126 LMLSQEKYASDLLRRVGMYECKPVSTPLSTSEKLSVNEGTLLGPQDSTQYRSVVGALQYL 1185

Query: 625  TMTKPDVAFAVNKLSQFLHAPTVT 554
            T+T+PD++F++NK+ QFLHAPT T
Sbjct: 1186 TLTRPDISFSINKVCQFLHAPTTT 1209



 Score =  191 bits (486), Expect(2) = e-154
 Identities = 91/179 (50%), Positives = 123/179 (68%)
 Frame = -1

Query: 555  HWQACKRILRYLTNTPNIGLHFTTATSLTLEAFSDADWAGNIDDMRSTTGYCIFLGGNLI 376
            HW A KRILRY+  T + GL F    SL +  FSDADWAG+ DD RST G+ +FLG NL+
Sbjct: 1210 HWAAVKRILRYVKYTVDTGLKFCRNPSLLVSGFSDADWAGSPDDRRSTGGFAVFLGPNLV 1269

Query: 375  KWISRKQKVVDRTSTESEYRALANAATDILWLQSLFDDLGLTISSCLVLWCDNISAGSLA 196
             W +RKQ  V R+S E+EY+ALANA  +I+W+Q+L  +LG+       LWCDN+ A  L+
Sbjct: 1270 SWSARKQATVSRSSIEAEYKALANATAEIMWVQTLLQELGVESPRAAKLWCDNLGAKYLS 1329

Query: 195  SNPVFHQRTKHIKLDVHFVREKVLAKQLVVQ*INTEEQVADILTKALASSKFTQFRDKL 19
            +NP+FH RTKHI++D HFVRE+V  K L +  I+T++QVAD  TKA+   +   F++ L
Sbjct: 1330 ANPIFHARTKHIEVDFHFVRERVARKLLEIAYISTKDQVADGFTKAIPVRQMEMFKNNL 1388


>gb|AAL66754.1|AF464738_5 putative copia-like retrotransposon Hopscotch polyprotein [Zea mays]
          Length = 1313

 Score =  382 bits (982), Expect(2) = e-154
 Identities = 234/598 (39%), Positives = 318/598 (53%), Gaps = 98/598 (16%)
 Frame = -3

Query: 2059 LRPYNRHKVGFHTSRCVFLGYSNKHKGYRYLQ-PNGRIFIAQSVTFDEYSFPFS------ 1901
            LRPYN HK+ F + +CVFLGYS+ HKG++ L    GR+++++ VTFDE  FPF+      
Sbjct: 537  LRPYNSHKLQFRSKQCVFLGYSSLHKGFKCLDVSTGRVYVSRDVTFDENFFPFASLHSNA 596

Query: 1900 ---------------LNFVT--SPVSPHTDHISSQLLPDF*ISTLIDISNKVDHTEACSS 1772
                           LN  T  S V    DH +        IS    + ++ +HT     
Sbjct: 597  GARLRSEIQLLSPDLLNPATFNSGVDSLIDHAADMSTDPNQISGDNSVQDQAEHTPNMD- 655

Query: 1771 LVIVPHIFPNQSPVLESPH----SSHNSDTPAVAAERI---------------------- 1670
             V+ P + PN +P  ++ H    +SH+   PA  +                         
Sbjct: 656  -VLAPSV-PNTAPEADAVHIPGSASHSGSAPAAPSTAAPSPTCRGDSRVATHPSASHDYV 713

Query: 1669 --------------------TQTNLPSTVEQQNSSPKQA---------------IHHMQT 1595
                                T    P++ E   S P  A               +    T
Sbjct: 714  ASVDMSRGIAGREESFLTAPTTATSPASSEPSGSLPATAADAQVPEPILGGVSSMDPAST 773

Query: 1594 RAKS----GIHKPK-------KFAFLTSSNHKSLEPPCVKEALSSPEWVEAMTAELHALK 1448
            R ++    G+ KPK       ++   TSS     EP  + EAL    W +AM  E  AL 
Sbjct: 774  RPRTRLQQGVRKPKVYTDGTIRYGCFTSSG----EPYDLNEALGDVNWKDAMDIEYSALM 829

Query: 1447 SNNTWSLVPATSNMHVLGCKWVFKMKMKDDGSTERYKARLVAKGFQQTPGLDYFETFSPV 1268
             N TW LVP     +V+GCKWV+K+K K DGS +RYKARLVAKG++Q  G+DY +TFSPV
Sbjct: 830  KNKTWHLVPPKKGRNVIGCKWVYKIKRKADGSLDRYKARLVAKGYKQQYGIDYDDTFSPV 889

Query: 1267 IKLSTIRVILTLAVTYGWDIQQVDINNAFLNGDLQETVYMSQPDGFVNPQLPTHVCKLHK 1088
            +K +TIR+IL++AV+ GW + Q+D+ NAFL+G L+E VYM QP G+ +     +VCKL K
Sbjct: 890  VKHATIRIILSIAVSRGWSLCQLDVQNAFLHGVLEEEVYMQQPPGYEDSTKLNYVCKLDK 949

Query: 1087 ALYGLKQAPRAWFEKLKQALFNWGFQNSRTDTSLFVSTSGGKFVFVLIYVDDILITGYDN 908
            ALYGLKQAPRAW+ +L   L + GFQ S+ DTSLF    G   +FVL+YVDDI++    +
Sbjct: 950  ALYGLKQAPRAWYSRLSNKLLSLGFQASKADTSLFFYNKGSVTIFVLVYVDDIIVASSTH 1009

Query: 907  TQVLKLVHDLHSQFALKMLGSLRYFLGFEAHRDSLGIYLTQHKYVMDLLAKTKMLEAKGC 728
                 L+ DL+ +FALK LG L YFLG E ++   GI LTQ KY  DLL K  M + K  
Sbjct: 1010 KATEALLSDLNKEFALKDLGDLNYFLGIEVNKVRDGIILTQDKYASDLLKKVGMSDCKPI 1069

Query: 727  DTSMCQNRKLSLNDSSHFDLS--TTYRSTIGALQYLTMTKPDVAFAVNKLSQFLHAPT 560
             T +  + KLS+++ S       T YRS +GALQYLT+T+PD+AF+VNK+ QFLHAPT
Sbjct: 1070 STPLSTSEKLSIHEGSPLGEKDITQYRSIVGALQYLTLTRPDIAFSVNKVCQFLHAPT 1127



 Score =  192 bits (488), Expect(2) = e-154
 Identities = 89/183 (48%), Positives = 123/183 (67%)
 Frame = -1

Query: 558  LHWQACKRILRYLTNTPNIGLHFTTATSLTLEAFSDADWAGNIDDMRSTTGYCIFLGGNL 379
            LHW A KRILRY+    N+GLH   + S  + AFSDADWAG++DD +ST G+ +FLG NL
Sbjct: 1129 LHWAAVKRILRYIKQCTNLGLHIHRSDSTLVSAFSDADWAGSVDDRKSTGGFAVFLGSNL 1188

Query: 378  IKWISRKQKVVDRTSTESEYRALANAATDILWLQSLFDDLGLTISSCLVLWCDNISAGSL 199
            + W +RKQ  V R+STESEY+ALANA  +++W+Q L  ++ +       LWCDN+ A  L
Sbjct: 1189 VSWSARKQPTVSRSSTESEYKALANATAELIWVQILLTEISIKSPRAAKLWCDNLGAKYL 1248

Query: 198  ASNPVFHQRTKHIKLDVHFVREKVLAKQLVVQ*INTEEQVADILTKALASSKFTQFRDKL 19
            ++NP+FH RTKHI++D HFVR++V  K L ++ + T +QVAD  TK L+      F+  L
Sbjct: 1249 SANPIFHARTKHIEVDYHFVRDRVAKKLLDIEYVPTGDQVADGFTKPLSVRLLENFKVNL 1308

Query: 18   TRT 10
              T
Sbjct: 1309 NLT 1311


>gb|ABA98049.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1460

 Score =  388 bits (996), Expect(2) = e-154
 Identities = 238/590 (40%), Positives = 318/590 (53%), Gaps = 90/590 (15%)
 Frame = -3

Query: 2059 LRPYNRHKVGFHTSRCVFLGYSNKHKGYRYLQ-PNGRIFIAQSVTFDEYSFPFS------ 1901
            LRPYN HK+ F + RCVFLG+S  HKG++ L+   GRI+I++ V FDE  FPF+      
Sbjct: 684  LRPYNNHKLQFRSKRCVFLGFSTMHKGFKCLEVSTGRIYISRDVVFDENIFPFTELHANA 743

Query: 1900 ---------------------------LNFVTSPVS-------------PHTDHI----- 1856
                                       ++ V +P+S             PH D       
Sbjct: 744  GARLRSEIDILTPELLGPIRSVGNEQCMHPVNNPLSADVSAALSNRANEPHRDGAVHPAD 803

Query: 1855 --SSQLLPDF*ISTLIDISNKVDHTEACSSLVIVPHIFPNQSPVLESPHSSHNSDTPAVA 1682
                   P    S+  +    V H+ A +S     H  P    V     SS   +T   +
Sbjct: 804  AEDPPATPPLDASSGPEPDRVVHHSPAATS--SGRHPGPTPGSVPRGAASSLAEETAEDS 861

Query: 1681 AERITQTNLPSTV-EQQNSSPKQ-----------AIHHM-------------QTRAKSGI 1577
              +  Q      V EQ+ SSP Q            + H              +TR +SG+
Sbjct: 862  VSQAVQEQESQVVQEQEQSSPAQEHAQAVTDETNTLQHADVTDTGSEAPAGPRTRLQSGV 921

Query: 1576 HKPK---------KFAFLTSSNHKSLEPPCVKEALSSPEWVEAMTAELHALKSNNTWSLV 1424
             K K         K ++ T+S     EP    EAL    W  AM +E  AL  N TW LV
Sbjct: 922  RKEKVYTDGTIKYKHSWFTASG----EPTNDLEALKDKNWKLAMDSEYDALVKNKTWHLV 977

Query: 1423 PATSNMHVLGCKWVFKMKMKDDGSTERYKARLVAKGFQQTPGLDYFETFSPVIKLSTIRV 1244
            P     +++GCKWV+K+K K DG+ +RYKARLVAKGF+Q  G+DY +TFSPV+K +TIR+
Sbjct: 978  PPQRGRNIIGCKWVYKIKRKADGTLDRYKARLVAKGFKQRYGIDYEDTFSPVVKAATIRI 1037

Query: 1243 ILTLAVTYGWDIQQVDINNAFLNGDLQETVYMSQPDGFVNPQLPTHVCKLHKALYGLKQA 1064
            IL+LAV+ GW ++Q+D+ NAFL+G L+E VYM QP GF +P  P HVCKL KALYGLKQA
Sbjct: 1038 ILSLAVSKGWSLRQLDVQNAFLHGYLEEEVYMLQPPGFEDPTKPHHVCKLDKALYGLKQA 1097

Query: 1063 PRAWFEKLKQALFNWGFQNSRTDTSLFVSTSGGKFVFVLIYVDDILITGYDNTQVLKLVH 884
            PRAWF +L + L + GF+ S+ DTSLF    G   +FVL+YVDDI++          L+ 
Sbjct: 1098 PRAWFSRLSKKLMDLGFKGSKPDTSLFFLNKGDITMFVLVYVDDIIVASSSEKATAALLQ 1157

Query: 883  DLHSQFALKMLGSLRYFLGFEAHRDSLGIYLTQHKYVMDLLAKTKMLEAKGCDTSMCQNR 704
            DL  +FALK LG L YFLG E  +   GI L Q KY  DLL K  M++ K  +T +  + 
Sbjct: 1158 DLKGEFALKDLGELHYFLGIEVSKVQNGIVLNQDKYANDLLKKVGMIDCKPANTPLSVSE 1217

Query: 703  KLSLNDSSHF--DLSTTYRSTIGALQYLTMTKPDVAFAVNKLSQFLHAPT 560
            KLSL++ S    + ++ YRS +GALQYLT+T+PD+AF+VNK+ QFLHAPT
Sbjct: 1218 KLSLHEGSLLGPEDASHYRSVVGALQYLTLTRPDIAFSVNKVCQFLHAPT 1267



 Score =  186 bits (472), Expect(2) = e-154
 Identities = 89/180 (49%), Positives = 119/180 (66%)
 Frame = -1

Query: 558  LHWQACKRILRYLTNTPNIGLHFTTATSLTLEAFSDADWAGNIDDMRSTTGYCIFLGGNL 379
            +HW A KRILRYL     +GL    + S  +  FSDADWAG +DD RST G+ IFLG NL
Sbjct: 1269 VHWIAVKRILRYLKQCTRLGLEIHKSGSTLVSGFSDADWAGCLDDRRSTGGFAIFLGSNL 1328

Query: 378  IKWISRKQKVVDRTSTESEYRALANAATDILWLQSLFDDLGLTISSCLVLWCDNISAGSL 199
            + W +RKQ  V R+STESEY+A+ANA  +I+W+Q+L  +L +       +WCDN+ A  L
Sbjct: 1329 VSWNARKQATVSRSSTESEYKAIANATAEIMWVQTLLAELEIKSPKAAKIWCDNLGAKYL 1388

Query: 198  ASNPVFHQRTKHIKLDVHFVREKVLAKQLVVQ*INTEEQVADILTKALASSKFTQFRDKL 19
            ++NPVFH RTKHI++D HFVRE+V  K L +  ++T +QVAD  TK L+      F+  L
Sbjct: 1389 SANPVFHARTKHIEVDYHFVRERVSQKLLEIDFVSTNDQVADGFTKPLSVRLLENFKSNL 1448


>gb|ACY72569.1| unknown [Oryza sativa Japonica Group]
          Length = 1436

 Score =  386 bits (991), Expect(2) = e-153
 Identities = 236/570 (41%), Positives = 315/570 (55%), Gaps = 70/570 (12%)
 Frame = -3

Query: 2059 LRPYNRHKVGFHTSRCVFLGYSNKHKGYRYLQ-PNGRIFIAQSVTFDEYSFPFSL----- 1898
            LRPYN HK+ F + +CVFLG+S  HKG++ L   +GR++I++ V FDE  FPFS      
Sbjct: 690  LRPYNTHKLQFRSKQCVFLGFSTHHKGFKCLDVSSGRVYISRDVVFDENIFPFSTLHSNA 749

Query: 1897 ----------------NFVTSPVSPHTDHISSQLLPDF*ISTLIDISNKVD--------- 1793
                            N+ T+  S    H+ + +      S  I IS+  D         
Sbjct: 750  GARLRSEILLLPSSLTNYETT--STGGTHVVAPVANTPIPSDNIIISDATDAVSGENGTA 807

Query: 1792 ---------HTEACSSLVIVPHIFPNQSPVLESPHSSHN--------SDTPAVAAERITQ 1664
                     H E  S  V+  H   + S   +    S +        S + A A+   +Q
Sbjct: 808  HEREVENVLHEEVPSGTVLESHPHADSSTATDQEAGSSDAASGTGGDSVSGAEASGAESQ 867

Query: 1663 TNLPSTVE-------------QQNSSPKQAIHHMQTRAKSGIHKPK-------KFAFLTS 1544
               PS  E                ++P    H   TR +SGI K K       K+   TS
Sbjct: 868  PVQPSPPETTATGDDATTATGDATAAPAPRPH---TRLRSGIRKEKVYTDGTVKYGCFTS 924

Query: 1543 SNHKSLEPPCVKEALSSPEWVEAMTAELHALKSNNTWSLVPATSNMHVLGCKWVFKMKMK 1364
            +     EP   KEAL    W  AM AE  AL  N+TW LVP     +V+GCKWV+K+K K
Sbjct: 925  TG----EPQNDKEALGDKNWKAAMEAEYDALIKNDTWHLVPYEKGQNVIGCKWVYKIKRK 980

Query: 1363 DDGSTERYKARLVAKGFQQTPGLDYFETFSPVIKLSTIRVILTLAVTYGWDIQQVDINNA 1184
             DG+ +RYKARLVAKGF+Q  G+DY +TFSPV+K +TIR+IL++AV+ GW ++Q+D+ NA
Sbjct: 981  ADGTLDRYKARLVAKGFKQRYGIDYEDTFSPVVKAATIRIILSIAVSRGWSLRQLDVQNA 1040

Query: 1183 FLNGDLQETVYMSQPDGFVNPQLPTHVCKLHKALYGLKQAPRAWFEKLKQALFNWGFQNS 1004
            FL+G L+E VYM QP GF +   P +VCKL KALYGLKQAPRAW+ +L + L   GF+ S
Sbjct: 1041 FLHGFLEEEVYMQQPPGFESFSKPNYVCKLDKALYGLKQAPRAWYSRLSKKLVELGFEAS 1100

Query: 1003 RTDTSLFVSTSGGKFVFVLIYVDDILITGYDNTQVLKLVHDLHSQFALKMLGSLRYFLGF 824
            + DTSLF    GG  +FVL+YVDDI+I          L+ DL+ +FALK LG L YFLG 
Sbjct: 1101 KADTSLFFLNKGGIIMFVLVYVDDIIIASSTEKATTALLKDLNKEFALKDLGDLHYFLGI 1160

Query: 823  EAHRDSLGIYLTQHKYVMDLLAKTKMLEAKGCDTSMCQNRKLSLNDSSHF--DLSTTYRS 650
            E  +   GI LTQ KY  DLL +  M   K   T +  + KL+L + S    + +T YRS
Sbjct: 1161 EVTKVPNGIVLTQEKYANDLLKRVNMSNCKPVSTPLSVSEKLTLYEGSPLGPNDATQYRS 1220

Query: 649  TIGALQYLTMTKPDVAFAVNKLSQFLHAPT 560
             +GALQYLT+T+PD+A++VNK+ QFLHAPT
Sbjct: 1221 IVGALQYLTLTRPDIAYSVNKVCQFLHAPT 1250



 Score =  186 bits (473), Expect(2) = e-153
 Identities = 85/182 (46%), Positives = 122/182 (67%)
 Frame = -1

Query: 555  HWQACKRILRYLTNTPNIGLHFTTATSLTLEAFSDADWAGNIDDMRSTTGYCIFLGGNLI 376
            HW A KRILRYL    ++GL+   + S  +  +SDADWAG++DD +ST G+ +FLG NL+
Sbjct: 1253 HWTAVKRILRYLNQCTSLGLNIHKSASTLVHGYSDADWAGSVDDRKSTGGFAVFLGSNLV 1312

Query: 375  KWISRKQKVVDRTSTESEYRALANAATDILWLQSLFDDLGLTISSCLVLWCDNISAGSLA 196
             W +RKQ  V R+STE+EY+A+AN   +++W+Q+L  +LG+       +WCDN+ A  L+
Sbjct: 1313 SWSARKQPTVSRSSTEAEYKAVANTTAELIWVQTLLRELGIDSPKAAKIWCDNLGAKYLS 1372

Query: 195  SNPVFHQRTKHIKLDVHFVREKVLAKQLVVQ*INTEEQVADILTKALASSKFTQFRDKLT 16
            +NPVFH RTKHI++D HFVRE+V  K L +  + + +QVAD  TKAL+      F+  L 
Sbjct: 1373 ANPVFHARTKHIEVDYHFVRERVSQKLLEIDFVPSGDQVADGFTKALSVRLLEHFKHNLN 1432

Query: 15   RT 10
             T
Sbjct: 1433 LT 1434


>ref|XP_006494841.1| PREDICTED: uncharacterized protein LOC102608996 [Citrus sinensis]
          Length = 1923

 Score =  372 bits (955), Expect(2) = e-152
 Identities = 203/407 (49%), Positives = 264/407 (64%), Gaps = 7/407 (1%)
 Frame = -3

Query: 1756 HIFPNQSPVLESPHSSHNSDTPAVAAERITQTNLPSTVEQQNSSPKQAI---HHMQTRAK 1586
            H  P+    + +   SH    P+      TQ   PS+   Q++ P Q     H M TRAK
Sbjct: 614  HSSPDSHNTILNVSPSHIHLQPSTLVTSHTQQ--PSSSLIQSTQPSQHSLPNHPMITRAK 671

Query: 1585 SGIHKPKKFAFLTSSNHKSLEPPCVKEALSSPEWVEAMTAELHALKSNNTWSLVPATSNM 1406
            +GI KPK  AFLTS  H SLEP  V EALS P+W  AM +E  AL  NNTW+LVP TS  
Sbjct: 672  AGIFKPK--AFLTS--HNSLEPSTVDEALSDPKWKAAMQSEFDALTRNNTWTLVPVTSQH 727

Query: 1405 HVLGCKWVFKMKMKDDGSTERYKARLVAKGFQQTPGLDYFETFSPVIKLSTIRVILTLAV 1226
             ++GCKWVF+ K    G+  ++KARLVAKGF QT G+DY ETFSPV+K ST+R IL+LAV
Sbjct: 728  KLVGCKWVFRTKYNTYGTVSKHKARLVAKGFHQTAGVDYKETFSPVVKSSTVRTILSLAV 787

Query: 1225 TYGWDIQQVDINNAFLNGDLQETVYMSQPDGFVNPQLPTHVCKLHKALYGLKQAPRAWFE 1046
              GW ++Q+DINNAFLNGD+ E +YM+QP+GF+  +   +VCKL KALYGLKQAPRAW++
Sbjct: 788  MKGWKVRQIDINNAFLNGDISEDLYMTQPEGFITKE--GYVCKLSKALYGLKQAPRAWYD 845

Query: 1045 KLKQALFNWGFQNSRTDTSLFVSTSGGKFVFVLIYVDDILITGYDNTQVLKLVHDLHSQF 866
            KLK  L +W F NS+ DTSLF+       + VLIYVDDILITG D++ +   +      F
Sbjct: 846  KLKGCLTSWNFFNSKADTSLFIRHDTRGIILVLIYVDDILITGPDSSLLETFITKFSKVF 905

Query: 865  ALKMLGSLRYFLGFEAHRDSLGIYLTQHKYVMDLLAKTKMLEAKGCDTSMCQNRKLSLND 686
            ALK LG + YFLG E      G++L+Q KY+ DLL++  M   KG DT +   +KL    
Sbjct: 906  ALKDLGFVSYFLGVEVCYTDSGMHLSQTKYIKDLLSRASMQNCKGSDTPLSTGQKLEKVA 965

Query: 685  S----SHFDLSTTYRSTIGALQYLTMTKPDVAFAVNKLSQFLHAPTV 557
            +      F+  T YRS +G LQYL +T+PD+A++V+KLSQ+L APT+
Sbjct: 966  NGCLGKEFEDPTLYRSIVGGLQYLILTRPDIAYSVHKLSQYLSAPTL 1012



 Score =  196 bits (497), Expect(2) = e-152
 Identities = 97/182 (53%), Positives = 129/182 (70%), Gaps = 3/182 (1%)
 Frame = -1

Query: 555  HWQACKRILRYLTNTPNIGLHFTTATSLT---LEAFSDADWAGNIDDMRSTTGYCIFLGG 385
            HW ACK++LRY  +T   G++      L    L  +SDADWA + DD +S   YCI+L  
Sbjct: 1014 HWLACKKVLRYHQSTVTHGIYIQKEGELEVTGLNGYSDADWACDTDDRKSIGAYCIYLSN 1073

Query: 384  NLIKWISRKQKVVDRTSTESEYRALANAATDILWLQSLFDDLGLTISSCLVLWCDNISAG 205
            NLI   S+KQ +V ++S ESEYRAL++A+++I WL+SLF +L +      VLWCDN SAG
Sbjct: 1074 NLISRSSKKQAIVAKSSIESEYRALSSASSEISWLESLFSELNIVKLPTPVLWCDNQSAG 1133

Query: 204  SLASNPVFHQRTKHIKLDVHFVREKVLAKQLVVQ*INTEEQVADILTKALASSKFTQFRD 25
             LA NPVFH R+KHI+LD+H++R+KVL KQL V+ I T+EQVAD+LTKAL+  KF+ FR 
Sbjct: 1134 ELAKNPVFHSRSKHIELDIHYIRDKVLQKQLEVRYIPTDEQVADVLTKALSLPKFSYFRS 1193

Query: 24   KL 19
            KL
Sbjct: 1194 KL 1195


>gb|AAT85031.1| putative polyprotein [Oryza sativa Japonica Group]
            gi|108708884|gb|ABF96679.1| retrotransposon protein,
            putative, Ty1-copia subclass [Oryza sativa Japonica
            Group]
          Length = 1437

 Score =  378 bits (970), Expect(2) = e-151
 Identities = 222/565 (39%), Positives = 313/565 (55%), Gaps = 65/565 (11%)
 Frame = -3

Query: 2059 LRPYNRHKVGFHTSRCVFLGYSNKHKGYRYLQPN-GRIFIAQSVTFDEYSF--------- 1910
            LRPYN+HK+ F ++ C FLGYS  HKG++ L P+ GR++I++ V FDE  F         
Sbjct: 688  LRPYNKHKLQFRSTTCTFLGYSTLHKGFKCLDPSTGRVYISRDVVFDETQFPFTKLHPNV 747

Query: 1909 ------------------PFSLNFVTSPVS-PHTDHISSQLLPDF*ISTLIDISNKVDHT 1787
                              P  L  ++S ++ P   ++S++ +      +  D   + +  
Sbjct: 748  GAKLRAEIALVPELAASLPRGLQQISSVINTPENANVSNENMQQ---DSTYDNEPETETD 804

Query: 1786 EACSSLVIVPHIFPNQSPVLE---SPHSSHNSDTPAVAAERITQTNLPSTVEQQNSSPK- 1619
             A  ++        + SP +    SP    +S T + A+  +     P      +S+P+ 
Sbjct: 805  GAPDTVSANAPAESSGSPPINEPASPFGESDSATASPASAPVNSAPHPDAAASGSSAPRG 864

Query: 1618 -----------------------QAIHHMQTRAKSGIHKPK-------KFAFLTSSNHKS 1529
                                   Q     +TR +SGI K K       K+  LTS+    
Sbjct: 865  STSQGGTPSVAIDDPHPATTVTGQEAQRPRTRLQSGIRKEKVYTDGTVKWGMLTSTG--- 921

Query: 1528 LEPPCVKEALSSPEWVEAMTAELHALKSNNTWSLVPATSNMHVLGCKWVFKMKMKDDGST 1349
             EP  +++AL +  W  AM AE  AL  NNTW LVP     +V+ CKWV+K+K K DGS 
Sbjct: 922  -EPENLQDALQNNNWKCAMDAEYMALIKNNTWHLVPPQQGRNVIDCKWVYKIKRKQDGSL 980

Query: 1348 ERYKARLVAKGFQQTPGLDYFETFSPVIKLSTIRVILTLAVTYGWDIQQVDINNAFLNGD 1169
            +RYKARLVAKGF+Q  G+DY +TFSPV+K +TIR+IL++AV+ GW ++Q+D+ NAFL+G 
Sbjct: 981  DRYKARLVAKGFKQRYGIDYEDTFSPVVKAATIRIILSIAVSRGWCLRQLDVQNAFLHGV 1040

Query: 1168 LQETVYMSQPDGFVNPQLPTHVCKLHKALYGLKQAPRAWFEKLKQALFNWGFQNSRTDTS 989
            L+E VYM QP G+ NP  P +VCKL KALYGLKQAPRAW+ +L   L + GF+ S+ DTS
Sbjct: 1041 LEEEVYMKQPPGYENPSTPDYVCKLDKALYGLKQAPRAWYSRLSGKLHDLGFKGSKADTS 1100

Query: 988  LFVSTSGGKFVFVLIYVDDILITGYDNTQVLKLVHDLHSQFALKMLGSLRYFLGFEAHRD 809
            LF    G   +F+LIYVDDI++       V  L+ DL  +FALK LG L YFLG E  + 
Sbjct: 1101 LFFYNKGSLTIFLLIYVDDIIVVSSRKEAVSALLQDLQKEFALKDLGDLHYFLGIEVTKI 1160

Query: 808  SLGIYLTQHKYVMDLLAKTKMLEAKGCDTSMCQNRKLSLNDSSHF--DLSTTYRSTIGAL 635
              GI ++Q KY  DLL +  M + K   T +  + KL     +    + +T YRS +GAL
Sbjct: 1161 PGGILMSQEKYASDLLKRVNMSDCKSVATPLSASEKLIAGKGTILGPNDATQYRSIVGAL 1220

Query: 634  QYLTMTKPDVAFAVNKLSQFLHAPT 560
            QYLT+T+ D+AF+VNK+ QFLH PT
Sbjct: 1221 QYLTLTRLDIAFSVNKVCQFLHNPT 1245



 Score =  187 bits (475), Expect(2) = e-151
 Identities = 87/179 (48%), Positives = 121/179 (67%)
 Frame = -1

Query: 555  HWQACKRILRYLTNTPNIGLHFTTATSLTLEAFSDADWAGNIDDMRSTTGYCIFLGGNLI 376
            HW A KRILRY+     +GL    ++S+ +  +SDADWAG +DD RST G+ ++LG NL+
Sbjct: 1248 HWAAVKRILRYIKQCTGLGLRICKSSSMIVSGYSDADWAGCLDDRRSTGGFAVYLGDNLV 1307

Query: 375  KWISRKQKVVDRTSTESEYRALANAATDILWLQSLFDDLGLTISSCLVLWCDNISAGSLA 196
             W ++KQ  V R+STE+EY+ALANA  +I+W+Q+L  +L +   +   LWCDN+ A  L+
Sbjct: 1308 SWNAKKQATVSRSSTEAEYKALANATAEIMWVQTLLQELNIVSPAMAQLWCDNMGAKYLS 1367

Query: 195  SNPVFHQRTKHIKLDVHFVREKVLAKQLVVQ*INTEEQVADILTKALASSKFTQFRDKL 19
             NPVFH RTKHI++D HFVRE+V  K L V  ++T +QVAD  TKAL   +   F+  L
Sbjct: 1368 FNPVFHARTKHIEVDYHFVRERVARKLLQVDYVSTNDQVADGFTKALPVKQLENFKYNL 1426


>dbj|BAB90546.1| putative rice retrotransposon retrofit gag/pol polyprotein [Oryza
            sativa Japonica Group]
          Length = 1448

 Score =  380 bits (977), Expect(2) = e-150
 Identities = 225/576 (39%), Positives = 315/576 (54%), Gaps = 74/576 (12%)
 Frame = -3

Query: 2059 LRPYNRHKVGFHTSRCVFLGYSNKHKGYRYLQ-PNGRIFIAQSVTFDEYSFPFS------ 1901
            L PYN HK+ F + +CVFLG+S  HKG+++L   +GR++I++ V FDE  FPFS      
Sbjct: 693  LHPYNTHKLQFRSKQCVFLGFSTHHKGFKFLDVSSGRVYISRDVVFDENVFPFSTLHSNA 752

Query: 1900 -------LNFVTSP------VSPHTDHI-----SSQLLPDF*ISTLIDISNKVD------ 1793
                   +  + SP      VS    HI     ++ L  D  IS   D+++  +      
Sbjct: 753  GARLRSEILLLPSPLTNYNTVSAGGTHIVAPVANTPLPSDNLISNAADVTSGENSAAHEQ 812

Query: 1792 -----------------HTEACSSLVI---------VPHIFPNQSPVLESPHSSHNSDTP 1691
                             H +A S  V+          P    N S  +    S    DT 
Sbjct: 813  EMENEQEIENVMHGNDVHGDAASGPVLDQPTADSSTAPDQGANTSDAVSGAASDAGGDTA 872

Query: 1690 AVAAERIT--------QTNLPSTVEQQNSSPKQAIHHMQTRAKSGIHKPK-------KFA 1556
             + A               +P  V    ++         TR +SGI K K       K+ 
Sbjct: 873  TLGAGAANGAAAGGEESQPVPPDVTGTVAATVAPASRPHTRLRSGIRKEKVYTNGTVKYG 932

Query: 1555 FLTSSNHKSLEPPCVKEALSSPEWVEAMTAELHALKSNNTWSLVPATSNMHVLGCKWVFK 1376
              +S+     EP   KEAL    W +AM  E +AL  N+TW LVP     +++GCKWV+K
Sbjct: 933  CFSSTG----EPQNDKEALGDKNWRDAMETEYNALIKNDTWHLVPYEKGQNIIGCKWVYK 988

Query: 1375 MKMKDDGSTERYKARLVAKGFQQTPGLDYFETFSPVIKLSTIRVILTLAVTYGWDIQQVD 1196
            +K K DG+ +RYK RL+AKGF+Q  G+DY +TFSPV+K +TIR+IL++AV+ GW ++Q+D
Sbjct: 989  VKRKADGTLDRYKTRLIAKGFKQRYGIDYEDTFSPVVKAATIRIILSIAVSRGWSLRQLD 1048

Query: 1195 INNAFLNGDLQETVYMSQPDGFVNPQLPTHVCKLHKALYGLKQAPRAWFEKLKQALFNWG 1016
            + N FL+G L+E VYM QP GF +   P +VCKL+KALYGLKQAPRAW+ +L + L   G
Sbjct: 1049 VQNDFLHGFLEEEVYMQQPPGFESSSKPDYVCKLNKALYGLKQAPRAWYSRLSKKLTELG 1108

Query: 1015 FQNSRTDTSLFVSTSGGKFVFVLIYVDDILITGYDNTQVLKLVHDLHSQFALKMLGSLRY 836
            F+ S+ DTSLF    GG  +FVL+YVDDI++          L+ DL+ +F LK LG L Y
Sbjct: 1109 FEASKADTSLFFLNKGGIIMFVLVYVDDIIVASSTEKATTALLKDLNKEFTLKDLGDLHY 1168

Query: 835  FLGFEAHRDSLGIYLTQHKYVMDLLAKTKMLEAKGCDTSMCQNRKLSLNDSSHF--DLST 662
            FLG E  + S G+ LTQ KY  D+L +  M   K   T +  + KL+L + S    + +T
Sbjct: 1169 FLGIEVTKVSNGVILTQEKYANDMLKRVNMSNCKPVSTPLSVSEKLTLYEGSPLGPNDAT 1228

Query: 661  TYRSTIGALQYLTMTKPDVAFAVNKLSQFLHAPTVT 554
             YRS +GALQYLT+T+PD+A++VNK+ QFLHAPT +
Sbjct: 1229 QYRSIVGALQYLTLTRPDIAYSVNKVCQFLHAPTTS 1264



 Score =  182 bits (461), Expect(2) = e-150
 Identities = 84/182 (46%), Positives = 121/182 (66%)
 Frame = -1

Query: 555  HWQACKRILRYLTNTPNIGLHFTTATSLTLEAFSDADWAGNIDDMRSTTGYCIFLGGNLI 376
            HW A KRILRYL    ++GLH   + S  +  +SDAD AG+IDD +ST G+ +FLG NL+
Sbjct: 1265 HWIAVKRILRYLNQCTSLGLHVHKSASTLVHGYSDADGAGSIDDRKSTGGFAVFLGSNLV 1324

Query: 375  KWISRKQKVVDRTSTESEYRALANAATDILWLQSLFDDLGLTISSCLVLWCDNISAGSLA 196
             W +RKQ  V R+STE+EY+A+AN   +++W+Q++  +LG+       +WCDN+ A  L+
Sbjct: 1325 SWSARKQPTVSRSSTEAEYKAVANTTAELIWVQTVLKELGIESPKAAKIWCDNLGAKYLS 1384

Query: 195  SNPVFHQRTKHIKLDVHFVREKVLAKQLVVQ*INTEEQVADILTKALASSKFTQFRDKLT 16
            +NPVFH +TKHI +D HFVRE+V  K L +  + + +QVAD  TKAL++     F+  L 
Sbjct: 1385 ANPVFHAKTKHIHVDYHFVRERVSQKLLEIDFVPSGDQVADGFTKALSARLLENFKHNLN 1444

Query: 15   RT 10
             T
Sbjct: 1445 LT 1446


>emb|CAN67247.1| hypothetical protein VITISV_008682 [Vitis vinifera]
          Length = 1270

 Score =  378 bits (971), Expect(2) = e-150
 Identities = 216/505 (42%), Positives = 294/505 (58%), Gaps = 6/505 (1%)
 Frame = -3

Query: 2059 LRPYNRHKVGFHTSRCVFLGYSNKHKGYRYLQPN-GRIFIAQSVTFDEYSFPFSLNFVTS 1883
            LRPYN HK+ + ++ CVFLGY++ HKGY  L  +  R++I++ V F E SFPF       
Sbjct: 605  LRPYNHHKLSYRSTACVFLGYASAHKGYICLDVSTSRLYISRDVLFHESSFPFQSIPAPL 664

Query: 1882 PVSPHTDHISSQLLPDF*IST----LIDISNKVDHTEACSSLVIVPHIFPNQSPVLESPH 1715
            P+  HT   S+ + P F +ST     +        T+  S+   +P       P+L+ P 
Sbjct: 665  PLPQHTPLTSALINPPF-LSTSSPPTVSFPIPTSSTDCTSTSDSLP-------PLLQVPF 716

Query: 1714 SSHNSDTPAVAAERITQTNLPSTVEQQNSSPKQA-IHHMQTRAKSGIHKPKKFAFLTSSN 1538
            S   S TP+                   SSP     H M TRAKSGIHK K F   T+S 
Sbjct: 717  SPTPSPTPS-------------------SSPSPLNTHPMVTRAKSGIHKKKSFLMQTTS- 756

Query: 1537 HKSLEPPCVKEALSSPEWVEAMTAELHALKSNNTWSLVPATSNMHVLGCKWVFKMKMKDD 1358
                EP    +A  S  WV+AM  E  AL  N+TWSLVP   + H++GC+W++K+K   +
Sbjct: 757  ----EPHTYSQAFKSEPWVQAMQHEYQALLRNHTWSLVPPPPSAHIVGCRWIYKLKYLPN 812

Query: 1357 GSTERYKARLVAKGFQQTPGLDYFETFSPVIKLSTIRVILTLAVTYGWDIQQVDINNAFL 1178
            GS E++KARL +                   +  TIR+IL LAV++ W I+Q+D+ NAFL
Sbjct: 813  GSVEKHKARLSS------------------CEACTIRLILALAVSFQWPIRQLDVENAFL 854

Query: 1177 NGDLQETVYMSQPDGFVNPQLPTHVCKLHKALYGLKQAPRAWFEKLKQALFNWGFQNSRT 998
            NGDLQE V+++QP GFV+P+ P +VCKLHKALYGLKQAPRAWF+KL+ AL ++GFQ+SR 
Sbjct: 855  NGDLQEEVFIAQPQGFVHPKYPHYVCKLHKALYGLKQAPRAWFQKLRVALVDYGFQSSRA 914

Query: 997  DTSLFVSTSGGKFVFVLIYVDDILITGYDNTQVLKLVHDLHSQFALKMLGSLRYFLGFEA 818
            DTSLF+       + +L+YVDDIL+TG +   V   +  LH +FAL+ LG L YFLG +A
Sbjct: 915  DTSLFIHHIASDILILLVYVDDILVTGSNPKLVSHFISYLHDKFALRDLGPLSYFLGIQA 974

Query: 817  HRDSLGIYLTQHKYVMDLLAKTKMLEAKGCDTSMCQNRKLSLNDSSHFDLSTTYRSTIGA 638
             +    + L Q KY+ DLL +T+M  +K   T     R LS  D  H    + YR  +GA
Sbjct: 975  QQQGSVLDLNQQKYIADLLHRTQMEASKPAPTLGSLGRTLSQFDGVHLPNPSEYRRIVGA 1034

Query: 637  LQYLTMTKPDVAFAVNKLSQFLHAP 563
            LQY+T+T+PD+AFAVNK  QF+  P
Sbjct: 1035 LQYVTLTRPDIAFAVNKACQFMAKP 1059



 Score =  183 bits (464), Expect(2) = e-150
 Identities = 89/181 (49%), Positives = 126/181 (69%)
 Frame = -1

Query: 549  QACKRILRYLTNTPNIGLHFTTATSLTLEAFSDADWAGNIDDMRSTTGYCIFLGGNLIKW 370
            +AC+ + +    T ++ LHF  +TS+ L+ +SDADWA   DD RST+GYC+FLG NLI W
Sbjct: 1051 KACQFMAKPFDGTISLSLHFQPSTSMELQGYSDADWASCPDDCRSTSGYCVFLGSNLISW 1110

Query: 369  ISRKQKVVDRTSTESEYRALANAATDILWLQSLFDDLGLTISSCLVLWCDNISAGSLASN 190
             S KQ +V ++S ESEYR L +   +++W+QSL   L L  +S  VLWCDN SA  L +N
Sbjct: 1111 SSSKQHLVSKSSAESEYRGLVSLTAELVWIQSLLQKLCLP-TSPPVLWCDNQSAAHLVAN 1169

Query: 189  PVFHQRTKHIKLDVHFVREKVLAKQLVVQ*INTEEQVADILTKALASSKFTQFRDKLTRT 10
            PVFH R+KHI+L++HF+REKVL ++L +  +++ +Q+ DILTK  + S+F   R KLT T
Sbjct: 1170 PVFHSRSKHIELELHFIREKVLRQELQICYVSSTDQLVDILTKHFSISQFCSLRSKLTVT 1229

Query: 9    S 7
            S
Sbjct: 1230 S 1230


>emb|CAN75478.1| hypothetical protein VITISV_020209 [Vitis vinifera]
          Length = 1074

 Score =  384 bits (986), Expect(2) = e-149
 Identities = 219/505 (43%), Positives = 300/505 (59%), Gaps = 3/505 (0%)
 Frame = -3

Query: 2059 LRPYNRHKVGFHTSRCVFLGYSNKHKGYRYLQPN-GRIFIAQSVTFDEYSFPFSLNFVTS 1883
            L+  N +K    ++ C+FLGY+  HKGY  L P   R++I++ V F E +FPF      S
Sbjct: 385  LKHLNSNKFQPRSTPCIFLGYAPSHKGYLCLNPTTNRVYISRHVVFAETTFPFQ---ALS 441

Query: 1882 PVSPHTDHISSQLLPDF*ISTLIDISNKVDHTEACSSLVIVPHIFPNQSPVLESPHSSHN 1703
            P S  + HI   + P F +       + +      SS +  P       P   SP ++  
Sbjct: 442  PPSQQSYHIP--VTPAFPLPP-----SPILFPPTTSSPLATP-----SEPAPTSPPANSL 489

Query: 1702 SDTPAVAAERITQTNLPSTVEQQNSSPKQAIHHMQTRAKSGIHKPKKFAFLTSSNHKSLE 1523
            S  P +    + +     T   Q+S+     H M TR+KSGI K K   +LTS    ++E
Sbjct: 490  SLPPLIHVPFVDEAAETPTTSLQDSTAPIPGHPMITRSKSGICKKK--TYLTSL---TIE 544

Query: 1522 PPCVKEALSSPEWVEAMTAELHALKSNNTWSLVPATSNMHVLGCKWVFKMKMKDDGSTER 1343
            P  VK+ L  P W  AM  E  AL  N TWSLVP  SN  ++ CKWVFK+K K +GS +R
Sbjct: 545  PRTVKQTLQDPNWKLAMEQEYQALLKNQTWSLVPPPSNAKIIRCKWVFKLKHKPNGSIDR 604

Query: 1342 YKARLVAKGFQQTPGLDYFETFSPVIKLSTIRVILTLAVTYGWDIQQVDINNAFLNGDLQ 1163
            YKARLVA+GF QT G+D+FETFSPV+K  TIR++L++AV+  W I+Q+D++NAFLNGDLQ
Sbjct: 605  YKARLVAQGFHQTYGIDFFETFSPVVKPCTIRLVLSIAVSSNWPIKQLDVHNAFLNGDLQ 664

Query: 1162 ETVYMSQPDGFVNPQLPTHVCKLHKALYGLKQAPRAWFEKLKQALFNWGFQNSRTDTSLF 983
            E V+M QP GF +   PTHVC+L KALYGLKQ PRAWF KL   L   GFQ SR + SLF
Sbjct: 665  EQVFMMQPPGFEDSSCPTHVCRLQKALYGLKQGPRAWFHKLSSFLLQIGFQCSRANASLF 724

Query: 982  VSTSGGKFVFVLIYVDDILITGYDNTQVLKLVHDLHSQFALKMLGSLRYFLGFEAHRDSL 803
               S    + +LIYVDDILITG + ++V +++  L S FAL+ LG + YFLG +  R S 
Sbjct: 725  YFHSASDIIILLIYVDDILITGSNPSRVHQIISQLSSHFALRDLGDISYFLGIKVTRLSH 784

Query: 802  GIYLTQHKYVMDLLAKTKMLEAKGCDTSMCQNRKLSLNDSSHFDL--STTYRSTIGALQY 629
             ++L Q  Y+  LL +  + EAK   T     + LS  D     +  +T YRS +GALQY
Sbjct: 785  ALHLNQQHYIHQLLERANLHEAKSASTPGALGKLLSAADGEPLSVLDATHYRSLVGALQY 844

Query: 628  LTMTKPDVAFAVNKLSQFLHAPTVT 554
            +T+T+P+++FAVN+  Q++  PT +
Sbjct: 845  ITLTRPEISFAVNRACQYMARPTTS 869



 Score =  176 bits (445), Expect(2) = e-149
 Identities = 85/180 (47%), Positives = 123/180 (68%)
 Frame = -1

Query: 555  HWQACKRILRYLTNTPNIGLHFTTATSLTLEAFSDADWAGNIDDMRSTTGYCIFLGGNLI 376
            H QA KRILRYL  T   G+    + SL+L+ ++D DWA   DD RST+G+C+F   NLI
Sbjct: 870  HLQAAKRILRYLKGTATHGISIHASPSLSLQGYTDVDWASCPDDKRSTSGFCLFFCTNLI 929

Query: 375  KWISRKQKVVDRTSTESEYRALANAATDILWLQSLFDDLGLTISSCLVLWCDNISAGSLA 196
             W S KQ+VV R+S ESEY ALA    ++ W+Q L  +L +      ++WCDNISA +LA
Sbjct: 930  SWSSTKQRVVSRSSAESEYWALALLVAEVSWVQFLLKELCIPQQDTPLIWCDNISATALA 989

Query: 195  SNPVFHQRTKHIKLDVHFVREKVLAKQLVVQ*INTEEQVADILTKALASSKFTQFRDKLT 16
            +N VFH R+KHI++D HFVR+KVL K+L++Q + + +Q+A++ TK + S +F+  R +L+
Sbjct: 990  ANSVFHARSKHIEIDFHFVRDKVLHKELLIQYVPSTDQLANVFTKHVPSCQFSAARTRLS 1049


>gb|KHN17953.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Glycine
            soja]
          Length = 1294

 Score =  380 bits (975), Expect(2) = e-149
 Identities = 210/506 (41%), Positives = 301/506 (59%), Gaps = 6/506 (1%)
 Frame = -3

Query: 2062 FLRPYNRHKVGFHTSRCVFLGYSNKHKGYRYLQPN-GRIFIAQSVTFDEYSFPFSLNFVT 1886
            +++PY  HK+   ++ CVF+GYS     Y  L P  GRI+ ++ V F E  FPF  N + 
Sbjct: 609  WIKPYANHKLAPKSAMCVFVGYSADQHAYLCLDPTTGRIYTSRHVKFVESEFPF--NSLV 666

Query: 1885 SPVSPHTDHISSQLLPDF*ISTLIDISNKVDHTEACSSLVIVPHIFPNQSPVLESPHSSH 1706
            +  SP  +  +  L     +S L  ++   D + A           P+   +  SP+ + 
Sbjct: 667  THASPSPEQQTGPLQ----LSILQPMNPPEDSSPA-----------PSSPSITNSPYMAQ 711

Query: 1705 NSDTPAVAAERITQTNLPSTVEQQNSSPKQAIHHMQ-----TRAKSGIHKPKKFAFLTSS 1541
            +S  P    +    T+  S   Q ++ P Q I +       TR+K+ I KP +   L   
Sbjct: 712  SSTEPTNPTQSPPPTSQSSP--QLSAPPPQTIVNPNGGGIITRSKNNIIKPIQKLNLHVQ 769

Query: 1540 NHKSLEPPCVKEALSSPEWVEAMTAELHALKSNNTWSLVPATSNMHVLGCKWVFKMKMKD 1361
                +EP  + +AL  P+W  AM AE  AL  NNTW LV  +S+ +++GCKWVF++K   
Sbjct: 770  ASSPIEPNTITQALRDPDWRSAMQAEFDALHHNNTWDLVSRSSDQNLVGCKWVFRIKRNP 829

Query: 1360 DGSTERYKARLVAKGFQQTPGLDYFETFSPVIKLSTIRVILTLAVTYGWDIQQVDINNAF 1181
            DGS +RYKARLVAKGF Q  G DY ETFSPV+K  TIR++LTLAV  GW I+Q+D+NNAF
Sbjct: 830  DGSIDRYKARLVAKGFHQRSGWDYTETFSPVVKPVTIRIVLTLAVRQGWPIRQLDVNNAF 889

Query: 1180 LNGDLQETVYMSQPDGFVNPQLPTHVCKLHKALYGLKQAPRAWFEKLKQALFNWGFQNSR 1001
            L G L+E V+M QP GFVN   P HVC+L KALYGLKQAPRAW+ +L+  LF+ GF NS 
Sbjct: 890  LQGTLKEEVFMIQPPGFVNKNFPDHVCRLKKALYGLKQAPRAWYTELRIFLFSLGFVNST 949

Query: 1000 TDTSLFVSTSGGKFVFVLIYVDDILITGYDNTQVLKLVHDLHSQFALKMLGSLRYFLGFE 821
             D SLF+       +++L+YVDDI++TG  + ++ KL+  L ++F+LK LG L YFLG E
Sbjct: 950  ADASLFIYQKPEVTLYLLVYVDDIIMTGNSSAELSKLIATLAARFSLKDLGCLSYFLGVE 1009

Query: 820  AHRDSLGIYLTQHKYVMDLLAKTKMLEAKGCDTSMCQNRKLSLNDSSHFDLSTTYRSTIG 641
                + G++L+Q KY++DLL K+ M   K   T +  + +L  +          YR+ +G
Sbjct: 1010 VIPSAAGMFLSQRKYIIDLLHKSGMTNTKPASTPLSASVQLLKDSGDLLPSPNEYRTLVG 1069

Query: 640  ALQYLTMTKPDVAFAVNKLSQFLHAP 563
            +LQYL++T+PD+AF+ NKL+QF+  P
Sbjct: 1070 SLQYLSLTRPDIAFSTNKLAQFMQNP 1095



 Score =  179 bits (454), Expect(2) = e-149
 Identities = 89/183 (48%), Positives = 124/183 (67%)
 Frame = -1

Query: 555  HWQACKRILRYLTNTPNIGLHFTTATSLTLEAFSDADWAGNIDDMRSTTGYCIFLGGNLI 376
            HW A KR+LRYL  + + G+  +    LT  A+SDADWAG+ DD  STTGY ++LG   I
Sbjct: 1099 HWSALKRVLRYLAGSCDKGVFISATAPLTFHAYSDADWAGDKDDYVSTTGYLLYLGNTPI 1158

Query: 375  KWISRKQKVVDRTSTESEYRALANAATDILWLQSLFDDLGLTISSCLVLWCDNISAGSLA 196
             W SRKQ+ V R+STE+EY+ALA+ A+++LW+ SLF +LG   ++  V++CDN+ A +L+
Sbjct: 1159 SWSSRKQRSVARSSTEAEYKALADTASELLWVLSLFTELGHMPTANPVIYCDNLGATNLS 1218

Query: 195  SNPVFHQRTKHIKLDVHFVREKVLAKQLVVQ*INTEEQVADILTKALASSKFTQFRDKLT 16
            +NPVFH R KHI L  HFVRE V   +  V  ++T++Q+ADILTK L   +F     KL 
Sbjct: 1219 ANPVFHSRMKHIALAYHFVREHVQHGKFRVSFVSTDDQLADILTKPLLRPRFESLLSKLH 1278

Query: 15   RTS 7
             +S
Sbjct: 1279 LSS 1281