BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Forsythia21_contig00014287
         (2523 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011071167.1| PREDICTED: cleavage and polyadenylation spec...   752   0.0  
emb|CDP13267.1| unnamed protein product [Coffea canephora]            714   0.0  
ref|XP_009619090.1| PREDICTED: cleavage and polyadenylation spec...   680   0.0  
ref|XP_009780918.1| PREDICTED: cleavage and polyadenylation spec...   672   0.0  
ref|XP_006341786.1| PREDICTED: cleavage and polyadenylation spec...   671   0.0  
ref|XP_012845456.1| PREDICTED: cleavage and polyadenylation spec...   644   0.0  
ref|XP_002515040.1| RNA binding protein, putative [Ricinus commu...   617   e-173
ref|XP_006483997.1| PREDICTED: cleavage and polyadenylation spec...   616   e-173
ref|XP_006438179.1| hypothetical protein CICLE_v10030915mg [Citr...   615   e-173
ref|XP_010650880.1| PREDICTED: cleavage and polyadenylation spec...   614   e-173
ref|XP_002282072.3| PREDICTED: cleavage and polyadenylation spec...   614   e-173
ref|XP_012085551.1| PREDICTED: cleavage and polyadenylation spec...   613   e-172
ref|XP_012085540.1| PREDICTED: cleavage and polyadenylation spec...   611   e-171
ref|XP_007044904.1| RNA-binding family protein isoform 1 [Theobr...   608   e-171
ref|XP_009359255.1| PREDICTED: cleavage and polyadenylation spec...   607   e-170
ref|XP_006483998.1| PREDICTED: cleavage and polyadenylation spec...   607   e-170
ref|XP_008389755.1| PREDICTED: RNA-binding protein FUS-like [Mal...   607   e-170
ref|XP_006438180.1| hypothetical protein CICLE_v10030917mg [Citr...   605   e-170
ref|XP_008340137.1| PREDICTED: cleavage and polyadenylation spec...   602   e-169
ref|XP_010320954.1| PREDICTED: LOW QUALITY PROTEIN: cleavage and...   601   e-168

>ref|XP_011071167.1| PREDICTED: cleavage and polyadenylation specificity factor subunit 6
            [Sesamum indicum]
          Length = 643

 Score =  752 bits (1942), Expect = 0.0
 Identities = 401/648 (61%), Positives = 441/648 (68%), Gaps = 5/648 (0%)
 Frame = -3

Query: 2440 MDPVADEQLDYGDGEYG--QKMQYHQVGAIPALVEEEMIGEXXXXXDLYNDVNVGEGFLQ 2267
            MDPV  EQLDYGD EY   QKMQYHQ GAIPAL EEEMIGE     DLYNDVNVGEGFLQ
Sbjct: 1    MDPVTGEQLDYGDEEYAGSQKMQYHQGGAIPALAEEEMIGEEDEYDDLYNDVNVGEGFLQ 60

Query: 2266 LQQSEAQMPAPGVGNGGSRAPKANVSDARNEARVLQEVNIPGVAKEQNY---SIQFPEQK 2096
            +Q+SEAQMP+ GVGNGG +  K+NV   R EA   QEV    V  E NY    +QFPEQK
Sbjct: 61   MQRSEAQMPS-GVGNGGFQGSKSNVPGIRAEAIAPQEVTNARVTSEGNYLPTGVQFPEQK 119

Query: 2095 SGLPADRRPEQIVDASQRGRISELTHKSQAGHLGFQGSVPMPQKIAADPINLSGKVAGEP 1916
            +  PA   P Q VDASQRGR+ E+ H SQ GHLG+QGSV MPQK AAD +N   K+ GEP
Sbjct: 120  TAFPAAGGPAQTVDASQRGRLPEMVHNSQPGHLGYQGSVSMPQKTAADRMNKPEKIVGEP 179

Query: 1915 SPLPNPTVGSSRGVPEIPASRMNPSSNVNVNRMVDNENLIRPAVENGNTMLFVGELHWWT 1736
            +P PNP +GSS+G P+IP + MN S+NVN+NR VD+E LIRPAVENGNTMLFVGELHWWT
Sbjct: 180  APSPNPNMGSSKGGPQIPTTMMNSSANVNINRPVDDEYLIRPAVENGNTMLFVGELHWWT 239

Query: 1735 TDAELETVLTQYGMVKEIKFFDERASGKSKGYCQVEFYDPAAASACKDGMNGYVFNGRAC 1556
            TDAELE+VL QYG VKEIKFFDERASGKSKGYCQVEFYDPAAA+ACK+GM+G++FNGRAC
Sbjct: 240  TDAELESVLIQYGKVKEIKFFDERASGKSKGYCQVEFYDPAAAAACKEGMHGHLFNGRAC 299

Query: 1555 VVAFATPQTIKQMGASYMNKTQAQAPSQPQGRRPMNDGAGRGNGANYSSGDAGRNFGRGG 1376
            VVAFATPQTIKQMG+SYMNKTQ Q  SQ QGR  +NDGAGRGNG NY SGD GRNFGRGG
Sbjct: 300  VVAFATPQTIKQMGSSYMNKTQTQGQSQQQGRNLINDGAGRGNGTNYPSGDTGRNFGRGG 359

Query: 1375 WVRGGQQLXXXXXXXXXXXXXXXXGTKNMIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1196
            W RGG Q+                G KNMI                              
Sbjct: 360  WGRGGNQVPNKGPGPGPVRGRGGMGNKNMI----GNAPGAGGGAYGQAGLAGPGFGGPPG 415

Query: 1195 XXXXXXXXXXGFDPAFMGRGAGYGGFSGPAFPGMLPPFQAVNPMGLPGVAPHVNPAFFXX 1016
                      GFD AFMGRG GY GFSGPAFPGMLPP+ AVN MGLPGVAPHVNPAFF  
Sbjct: 416  MMHPQGMMGPGFDLAFMGRGGGYAGFSGPAFPGMLPPYPAVNSMGLPGVAPHVNPAFFSR 475

Query: 1015 XXXXXXXXXXXXXXXXGPHSGMWNDPNMXXXXXXXXXXXXXESSYGGEDNASEYGYGEAS 836
                            GPHSGMW D N+             ESSYGGEDNASEYGYGEAS
Sbjct: 476  GMAPNGMGMMGTTGMDGPHSGMWPDMNLGGWGGEEHGRGTRESSYGGEDNASEYGYGEAS 535

Query: 835  LDKGVRPSAASREKERNSERDWSINSXXXXXXXXXXXXXXXXXXXXXXXXKDGYRDYRNK 656
             +KGVR SAASREKERNSERDWS N                         KD +RDYR+K
Sbjct: 536  HEKGVRSSAASREKERNSERDWSSNPEKRHREERDHDGDRYDRDHKYREEKDRHRDYRHK 595

Query: 655  ERDLGYEDDWDKGQXXXXXXXXRAVPEEDHRSRSRDADYGKRRRIPSE 512
            +RDLGY+DDWD+GQ        RAVP +DHRSRSRDADYGKR+R+PSE
Sbjct: 596  DRDLGYDDDWDRGQSSRSRSRSRAVPGDDHRSRSRDADYGKRKRMPSE 643


>emb|CDP13267.1| unnamed protein product [Coffea canephora]
          Length = 655

 Score =  714 bits (1843), Expect = 0.0
 Identities = 392/656 (59%), Positives = 437/656 (66%), Gaps = 13/656 (1%)
 Frame = -3

Query: 2440 MDPVADEQLDYGDGEYG--QKMQYHQVGAIPALVEEEMIGEXXXXXDLYNDVNVGEGFLQ 2267
            MDP  DEQLD+GD EYG  QKMQYH+ GAIPAL E+EMI E     DLYNDVNVGEGFLQ
Sbjct: 1    MDPGGDEQLDFGDEEYGGSQKMQYHRGGAIPALAEDEMINEDDEYDDLYNDVNVGEGFLQ 60

Query: 2266 LQQ---SEAQMPAPGVGNGGSRAPKANVSDARNEARVLQEVNIPGVAKEQNYS---IQFP 2105
            +QQ   SE      GVGNGG  AP+A+V D R E  V Q VNIP  A E  Y+   ++FP
Sbjct: 61   MQQQQRSETPRAPLGVGNGGFPAPRASVQDPRAETVVTQGVNIPRSATEGKYTNSGVRFP 120

Query: 2104 EQKSGLPADRRPEQIVDASQRGRISELTHKSQAGHLGFQGS--VPMPQKIAADPINLSGK 1931
            +QKSGL +D       DASQ+GR  E+ H SQAG+LG+QGS  V M QK+  + +++SGK
Sbjct: 121  DQKSGLASDVGALPGTDASQKGRAPEIIHNSQAGNLGYQGSMAVAMSQKVGVESLDMSGK 180

Query: 1930 VAGEPSPLPNPTVGSSRGVPEIPASRMNPSSNVNVNRMVDNENLIRPAVENGNTMLFVGE 1751
            V GEP PL NP  G+ R +P++PA+ M+ SSNVN  R V  EN +RPAVENGNTMLFVGE
Sbjct: 181  VTGEPGPLLNPVAGAPRVIPQVPANHMSSSSNVNSIRPVVTENQVRPAVENGNTMLFVGE 240

Query: 1750 LHWWTTDAELETVLTQYGMVKEIKFFDERASGKSKGYCQVEFYDPAAASACKDGMNGYVF 1571
            LHWWTTD ELE+VLTQYG VKEIKFFDERASGKSKGYCQVEF DPAAA+ACK+GMNG+VF
Sbjct: 241  LHWWTTDTELESVLTQYGKVKEIKFFDERASGKSKGYCQVEFSDPAAAAACKEGMNGHVF 300

Query: 1570 NGRACVVAFATPQTIKQMGASYMNKT--QAQAPSQPQGRRPMNDGAGRGNGANYSSGDAG 1397
            NGRACVVA ATPQTIKQM ASYMNKT  Q+Q+ SQPQGRRPMNDGAGRGNG NY SGDAG
Sbjct: 301  NGRACVVALATPQTIKQMAASYMNKTQVQSQSQSQPQGRRPMNDGAGRGNGTNYPSGDAG 360

Query: 1396 RNFGRGGWV-RGGQQLXXXXXXXXXXXXXXXXGTKNMIXXXXXXXXXXXXXXXXXXXXXX 1220
            RNFGRGGW  RGGQ +                G KNM+                      
Sbjct: 361  RNFGRGGWAGRGGQGMPNKAPVGVPGRGRGTVGAKNMMGNAPGGGNGVTGGAYGQGLAGP 420

Query: 1219 XXXXXXXXXXXXXXXXXXGFDPAFMGRGAGYGGFSGPAFPGMLPPFQAVNPMGLPGVAPH 1040
                              GFDP +MGRGAGYGGFSGPAFPGM+PPF AVN MGL GVAPH
Sbjct: 421  AFGGPPTGLMHPQAMMGPGFDPTYMGRGAGYGGFSGPAFPGMIPPFPAVNHMGLAGVAPH 480

Query: 1039 VNPAFFXXXXXXXXXXXXXXXXXXGPHSGMWNDPNMXXXXXXXXXXXXXESSYGGEDNAS 860
            VNPAFF                  GPH+GMW D +M             ESSYGGEDNAS
Sbjct: 481  VNPAFFGRGMAANGMGMMGTGGMDGPHAGMWTDTSM-GWGGEEHGRRTRESSYGGEDNAS 539

Query: 859  EYGYGEASLDKGVRPSAASREKERNSERDWSINSXXXXXXXXXXXXXXXXXXXXXXXXKD 680
            EYGYGEAS DKGVR SAASREKER SERDWS +S                        KD
Sbjct: 540  EYGYGEASHDKGVRSSAASREKERGSERDWSGSSDRRHRDEREHDRDRYDRDHRYREEKD 599

Query: 679  GYRDYRNKERDLGYEDDWDKGQXXXXXXXXRAVPEEDHRSRSRDADYGKRRRIPSE 512
             YR+YR+KERD GYEDD+D+GQ        RAVPEE HRSRSRDADYGKRRR+PSE
Sbjct: 600  SYREYRHKERDPGYEDDYDRGQPSRSRSRSRAVPEEHHRSRSRDADYGKRRRLPSE 655


>ref|XP_009619090.1| PREDICTED: cleavage and polyadenylation specificity factor subunit 6
            [Nicotiana tomentosiformis]
          Length = 648

 Score =  680 bits (1754), Expect = 0.0
 Identities = 370/651 (56%), Positives = 423/651 (64%), Gaps = 8/651 (1%)
 Frame = -3

Query: 2440 MDPVADEQLDYGDGEYG--QKMQYHQVGAIPALVEEEMIGEXXXXXDLYNDVNVGEGFLQ 2267
            MDP ADEQLDYGD EYG   KMQYH  G IPAL E+EM+GE     DLYNDVNVGEGFLQ
Sbjct: 1    MDPTADEQLDYGDEEYGGSHKMQYHGGGTIPALAEDEMMGEDDEYDDLYNDVNVGEGFLQ 60

Query: 2266 LQQSEAQMPAPGVGNGGSRAPKANVSDARNEARVLQEVNIPGVAKEQNYS---IQFPEQK 2096
            LQ+SEA +P    GNG  R  KA+  DA+ +     E  IPGVA E  Y+   ++FPEQK
Sbjct: 61   LQRSEAPVPPVDAGNGSFRDQKASFPDAKADGIGSDEAKIPGVATEGKYAGTEVRFPEQK 120

Query: 2095 SGLPADRRPEQIVDASQRGR--ISELTHKSQAGHLGFQGSVPMPQKIAADPINLSGKVAG 1922
            SG  A+R  E+  DA+Q+GR     LT  SQ G+ G+QGS+P  QKI ADPIN+  K A 
Sbjct: 121  SGPVAERGTERPADAAQKGRPLAMMLTGDSQMGNSGYQGSIPTTQKIGADPINMPEKNAN 180

Query: 1921 EPSPLPNPTVGSSRGVPEIPASRMNPSSNVNVNRMVDNENLIRPAVENGNTMLFVGELHW 1742
            E +PL N  VG SR VP++P ++++ S NVN+N  + +E  IRP++ENGNTMLFVGELHW
Sbjct: 181  EATPLVNSGVGGSRVVPQMPTNQLSSSGNVNMNSPIISETPIRPSLENGNTMLFVGELHW 240

Query: 1741 WTTDAELETVLTQYGMVKEIKFFDERASGKSKGYCQVEFYDPAAASACKDGMNGYVFNGR 1562
            WTTD+E+E+VLTQYG VKEIKFFDERASGKSKGYCQVEF+DPAAA++CK+GMNG++FNGR
Sbjct: 241  WTTDSEIESVLTQYGNVKEIKFFDERASGKSKGYCQVEFFDPAAAASCKEGMNGHIFNGR 300

Query: 1561 ACVVAFATPQTIKQMGASYMNKTQAQAPSQPQGRRPMNDGAGRGNGANYSSGDAGRNFGR 1382
            ACVVAFATPQTIKQMG+SYMNKTQ Q  +QPQGRRPMN+G GRG GANY+ GDAGRNFGR
Sbjct: 301  ACVVAFATPQTIKQMGSSYMNKTQNQVQTQPQGRRPMNEGVGRG-GANYTPGDAGRNFGR 359

Query: 1381 GGWVRGGQQLXXXXXXXXXXXXXXXXGTKNMIXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1202
            G W RGG  +                G KNM+                            
Sbjct: 360  GSWGRGGPGMPNRGPGGGPVRGRGGMGAKNMM--GNPGTGTGHGGAFGQGLAGPAFGGPP 417

Query: 1201 XXXXXXXXXXXXGFDPAFMGRGAGYGGFSGPAFPGMLPPFQAVNPMGLPGVAPHVNPAFF 1022
                        GFDP FMGRGAGYGGFSGPAFPGM+P F AVNPMGLPGVAPHVNPAFF
Sbjct: 418  AGLMHPQGMMGPGFDPGFMGRGAGYGGFSGPAFPGMIPQFPAVNPMGLPGVAPHVNPAFF 477

Query: 1021 XXXXXXXXXXXXXXXXXXGPHSGMWNDPNMXXXXXXXXXXXXXESSYGGEDNASEYGYGE 842
                              GPH GMW D +              ESSYGGEDNASEYGYGE
Sbjct: 478  GRGMSANGMGMMGNAGMDGPHPGMWTDTSGGGWGGEEHGRRTRESSYGGEDNASEYGYGE 537

Query: 841  ASLDKGVRPSAASREKERNSERDWSINSXXXXXXXXXXXXXXXXXXXXXXXXKDGYRDYR 662
             S DKG R SA SREKER SERDWS NS                        +DGYR YR
Sbjct: 538  VSHDKGARSSAVSREKERGSERDWSGNSERRHRDEREHDRERYDREHRYKEERDGYRHYR 597

Query: 661  NKERDLGYEDDWDKGQ-XXXXXXXXRAVPEEDHRSRSRDADYGKRRRIPSE 512
            +KER+  YEDD+D+GQ         RA  EEDHRSRSRD +YGKRRR PSE
Sbjct: 598  HKEREAEYEDDYDRGQSSSRSRSRSRAAQEEDHRSRSRDTNYGKRRRAPSE 648


>ref|XP_009780918.1| PREDICTED: cleavage and polyadenylation specificity factor subunit 6
            [Nicotiana sylvestris]
          Length = 648

 Score =  672 bits (1734), Expect = 0.0
 Identities = 367/651 (56%), Positives = 419/651 (64%), Gaps = 8/651 (1%)
 Frame = -3

Query: 2440 MDPVADEQLDYGDGEYG--QKMQYHQVGAIPALVEEEMIGEXXXXXDLYNDVNVGEGFLQ 2267
            MDP ADEQLDYGD EYG   KMQYH  G IPAL E+EM+GE     DLYNDVNVGEGFLQ
Sbjct: 1    MDPTADEQLDYGDEEYGGSHKMQYHGGGTIPALAEDEMMGEDDEYDDLYNDVNVGEGFLQ 60

Query: 2266 LQQSEAQMPAPGVGNGGSRAPKANVSDARNEARVLQEVNIPGVAKEQNYS---IQFPEQK 2096
            LQ+SEA +P    GN   +  KA+  DA+ +     E  IPGVA E  Y+   ++FPEQK
Sbjct: 61   LQRSEAPVPPVDAGNVSFQDQKASFPDAKADGIGSDEAKIPGVATEGKYAGTEVRFPEQK 120

Query: 2095 SGLPADRRPEQIVDASQRGR--ISELTHKSQAGHLGFQGSVPMPQKIAADPINLSGKVAG 1922
            SG   +R  E+  DA+Q+GR     LT  SQ G+ G+QGS+   QKI ADPIN+  K A 
Sbjct: 121  SGPVVERGTERPADAAQKGRPLAMMLTRDSQVGNSGYQGSIQTTQKIGADPINMPEKNAN 180

Query: 1921 EPSPLPNPTVGSSRGVPEIPASRMNPSSNVNVNRMVDNENLIRPAVENGNTMLFVGELHW 1742
            E +PL N  VG SR V ++P ++++ S NVN+N  + +E  IRP++ENGNTMLFVGELHW
Sbjct: 181  EATPLVNSGVGGSRVVTQMPTNQLSSSGNVNINSPIISETPIRPSLENGNTMLFVGELHW 240

Query: 1741 WTTDAELETVLTQYGMVKEIKFFDERASGKSKGYCQVEFYDPAAASACKDGMNGYVFNGR 1562
            WTTDAE+E+VLTQYG VKEIKFFDERASGKSKGYCQVEF+DPAAA++CK+GMNG++FNGR
Sbjct: 241  WTTDAEIESVLTQYGNVKEIKFFDERASGKSKGYCQVEFFDPAAAASCKEGMNGHIFNGR 300

Query: 1561 ACVVAFATPQTIKQMGASYMNKTQAQAPSQPQGRRPMNDGAGRGNGANYSSGDAGRNFGR 1382
            ACVVAFATPQTIKQMG+SYMNKTQ Q  +QPQGRRPMN+G GRG GANY+ GDAGRNFGR
Sbjct: 301  ACVVAFATPQTIKQMGSSYMNKTQNQVQTQPQGRRPMNEGVGRG-GANYAPGDAGRNFGR 359

Query: 1381 GGWVRGGQQLXXXXXXXXXXXXXXXXGTKNMIXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1202
            G W RGG  +                G KNM+                            
Sbjct: 360  GSWGRGGPGMPNRGPGGGPVRGRGGMGAKNMM--GNPGAGTGPGGAFGQGLAGPAFGGPP 417

Query: 1201 XXXXXXXXXXXXGFDPAFMGRGAGYGGFSGPAFPGMLPPFQAVNPMGLPGVAPHVNPAFF 1022
                        GFDP FMGRGAGYGGFSGPAFPGM+P F AVNPMGLPGVAPHVNPAFF
Sbjct: 418  AGLMHPQGMMGPGFDPGFMGRGAGYGGFSGPAFPGMIPQFPAVNPMGLPGVAPHVNPAFF 477

Query: 1021 XXXXXXXXXXXXXXXXXXGPHSGMWNDPNMXXXXXXXXXXXXXESSYGGEDNASEYGYGE 842
                              GPH GMW D +              ESSYGGEDNASEYGYGE
Sbjct: 478  GRGMSANGMGMMGNAGMDGPHPGMWTDTSGGGWGGEEHGRRTRESSYGGEDNASEYGYGE 537

Query: 841  ASLDKGVRPSAASREKERNSERDWSINSXXXXXXXXXXXXXXXXXXXXXXXXKDGYRDYR 662
             S DKG R SA SREKER SERDWS NS                        +DGYRDYR
Sbjct: 538  VSHDKGARSSAVSREKERGSERDWSGNSERRHRDEREHDRERYDREHRYKEERDGYRDYR 597

Query: 661  NKERDLGYEDDWDKGQ-XXXXXXXXRAVPEEDHRSRSRDADYGKRRRIPSE 512
             KER+  YEDD+D+GQ         RA  EEDHRSRSRD +YGKRRR PSE
Sbjct: 598  QKERESEYEDDYDRGQSSSRSRSRSRAAQEEDHRSRSRDTNYGKRRRAPSE 648


>ref|XP_006341786.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
            CG7185-like isoform X1 [Solanum tuberosum]
            gi|565349616|ref|XP_006341787.1| PREDICTED: cleavage and
            polyadenylation specificity factor subunit CG7185-like
            isoform X2 [Solanum tuberosum]
          Length = 648

 Score =  671 bits (1731), Expect = 0.0
 Identities = 365/651 (56%), Positives = 418/651 (64%), Gaps = 8/651 (1%)
 Frame = -3

Query: 2440 MDPVADEQLDYGDGEYG--QKMQYHQVGAIPALVEEEMIGEXXXXXDLYNDVNVGEGFLQ 2267
            MDP ADEQLDYGD EYG   KMQYH  G IPAL E+EM+GE     DLYNDVN+GEGFLQ
Sbjct: 1    MDPTADEQLDYGDEEYGGSHKMQYHGSGTIPALAEDEMMGEDDEYDDLYNDVNIGEGFLQ 60

Query: 2266 LQQSEAQMPAPGVGNGGSRAPKANVSDARNEARVLQEVNIPGVAKEQNYS---IQFPEQK 2096
            LQ+SE  +P+   GNG  +A K +   +R      +E  IPG+A E  Y+   +QFP+QK
Sbjct: 61   LQRSEVPVPSVDAGNGNFQAQKDSFPASRAGGLGSEEAKIPGIATEGKYAGTEVQFPQQK 120

Query: 2095 SGLPADRRPEQIVDASQRGRISELTH--KSQAGHLGFQGSVPMPQKIAADPINLSGKVAG 1922
                 +R  E+  DA+Q+ R S +T    SQAG+ G+QGS+PMPQKI ADP+ +  K A 
Sbjct: 121  GEPVVERETERPADAAQKARPSAITMTLNSQAGNSGYQGSMPMPQKIGADPMAMPEKNAS 180

Query: 1921 EPSPLPNPTVGSSRGVPEIPASRMNPSSNVNVNRMVDNENLIRPAVENGNTMLFVGELHW 1742
            E +PL N  V   R VP +P +++N S NVN+N  V +E   RP++ENGNTMLFVGELHW
Sbjct: 181  EATPLMNSVVPGPRVVPHMPTNQLNSSGNVNMNNPVISETPFRPSLENGNTMLFVGELHW 240

Query: 1741 WTTDAELETVLTQYGMVKEIKFFDERASGKSKGYCQVEFYDPAAASACKDGMNGYVFNGR 1562
            WTTDAELE+VLTQYG VKEIKFFDERASGKSKGYCQVEF+DPA+A+ACK+GMNGY FNGR
Sbjct: 241  WTTDAELESVLTQYGNVKEIKFFDERASGKSKGYCQVEFFDPASAAACKEGMNGYNFNGR 300

Query: 1561 ACVVAFATPQTIKQMGASYMNKTQAQAPSQPQGRRPMNDGAGRGNGANYSSGDAGRNFGR 1382
            ACVVAFATPQTIKQMG+SY NKTQ Q  SQPQGRRPMN+G GRG G NY+ GDAGRNFGR
Sbjct: 301  ACVVAFATPQTIKQMGSSYANKTQNQVQSQPQGRRPMNEGVGRG-GPNYTPGDAGRNFGR 359

Query: 1381 GGWVRGGQQLXXXXXXXXXXXXXXXXGTKNMIXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1202
            G W RGG  +                G+KNM+                            
Sbjct: 360  GSWGRGGPGMPNRGPGGGPVRGRGAMGSKNMM--VNPGAGNGAGGAFGQGLAGPAFGGPP 417

Query: 1201 XXXXXXXXXXXXGFDPAFMGRGAGYGGFSGPAFPGMLPPFQAVNPMGLPGVAPHVNPAFF 1022
                        GFDP+FMGRGAGYGGFSGPAFPGM+PPFQAVNPMGLPGVAPHVNPAFF
Sbjct: 418  AGLMHPQGMMGPGFDPSFMGRGAGYGGFSGPAFPGMMPPFQAVNPMGLPGVAPHVNPAFF 477

Query: 1021 XXXXXXXXXXXXXXXXXXGPHSGMWNDPNMXXXXXXXXXXXXXESSYGGEDNASEYGYGE 842
                              GPH GMW D +              ESSYGGEDNASEYGYGE
Sbjct: 478  GRGMAANGMGMMSAAGMDGPHPGMWTDTSGGGWGGEEHGRRTRESSYGGEDNASEYGYGE 537

Query: 841  ASLDKGVRPSAASREKERNSERDWSINSXXXXXXXXXXXXXXXXXXXXXXXXKDGYRDYR 662
             S DKG R SA SREKER SERDWS NS                        +DGYRDYR
Sbjct: 538  VSHDKGARSSAVSREKERGSERDWSGNSDKRHRDEREHDRDRHDKEHRYREERDGYRDYR 597

Query: 661  NKERDLGYEDDWDKGQ-XXXXXXXXRAVPEEDHRSRSRDADYGKRRRIPSE 512
             KER+  YE+D+D+GQ         RA  EEDHRSRSRD +YGKRRR PSE
Sbjct: 598  QKERESEYEEDYDRGQSSSRSRSKSRAAQEEDHRSRSRDTNYGKRRRAPSE 648


>ref|XP_012845456.1| PREDICTED: cleavage and polyadenylation specificity factor subunit 6
            [Erythranthe guttatus] gi|604319404|gb|EYU30596.1|
            hypothetical protein MIMGU_mgv1a002773mg [Erythranthe
            guttata]
          Length = 639

 Score =  644 bits (1661), Expect = 0.0
 Identities = 365/651 (56%), Positives = 410/651 (62%), Gaps = 8/651 (1%)
 Frame = -3

Query: 2440 MDPVADEQLDYGDGEYG--QKMQYHQVGAIPALVEEEMIGEXXXXXDLYNDVNVGEGFLQ 2267
            MDPV DEQLDYGD EYG  QKMQYH  GAIPAL E+EMIG+     DLYNDVNVGEGF+Q
Sbjct: 1    MDPVTDEQLDYGDEEYGGNQKMQYHHGGAIPALAEDEMIGDDDEYDDLYNDVNVGEGFMQ 60

Query: 2266 LQQSEAQMPAPGVGNGGSRAPKANVSDARNEARVLQEVNIPGVAKEQNYS---IQFPEQK 2096
            +Q+SEA  P+  VGN      K      R EA   QEVN   V  E +Y+   +Q  +QK
Sbjct: 61   MQRSEAPPPS-AVGNNSFSISKNTAPGTRAEAIASQEVNNGRVGNEGSYAPNGVQLSDQK 119

Query: 2095 SGLPADRRPEQIVDASQRGRISELTHKSQAGHLGFQGSVPMPQKIAADPINLSGKVAGEP 1916
            + L A   P Q VDASQR R+ E+ + SQA HLG+QGS  M  K A D +N S  + GEP
Sbjct: 120  NNLTAVGGPAQPVDASQRVRLPEVANSSQAAHLGYQGSEIMLHKTATDRMNNSENIVGEP 179

Query: 1915 SPLPNPTVGSSRGVPEIPASRMNPSSNVNVN--RMVDNENLIRPAV-ENGNTMLFVGELH 1745
            + L  P  GSS+GVP+ P++ MN ++NVNVN  R +D+E LIRP+  ENGN M++VGELH
Sbjct: 180  ASLVYPNTGSSKGVPQAPSNLMNSNANVNVNVNRSMDDEYLIRPSGGENGNPMIYVGELH 239

Query: 1744 WWTTDAELETVLTQYGMVKEIKFFDERASGKSKGYCQVEFYDPAAASACKDGMNGYVFNG 1565
            WWTTDAE+E+VL QYG VKEIKFFDERASGKSKGYCQVEFYDPAAA+ACKDGM G++FNG
Sbjct: 240  WWTTDAEVESVLIQYGRVKEIKFFDERASGKSKGYCQVEFYDPAAATACKDGMQGHIFNG 299

Query: 1564 RACVVAFATPQTIKQMGASYMNKTQAQAPSQPQGRRPMNDGAGRGNGANYSSGDAGRNFG 1385
            RACVV +A PQT KQMGASY NK Q Q+ SQ QGR PMNDGAGRGNG NY SGDAGRNFG
Sbjct: 300  RACVVTYANPQTSKQMGASY-NKNQGQSQSQLQGRNPMNDGAGRGNGTNYPSGDAGRNFG 358

Query: 1384 RGGWVRGGQQLXXXXXXXXXXXXXXXXGTKNMIXXXXXXXXXXXXXXXXXXXXXXXXXXX 1205
            RGG    G Q                 G KNMI                           
Sbjct: 359  RGGGWGRGNQAPNRGPGAGPIRGRGGMGNKNMI----GNAPGAGGGGAYGQGLNGPGFGG 414

Query: 1204 XXXXXXXXXXXXXGFDPAFMGRGAGYGGFSGPAFPGMLPPFQAVNPMGLPGVAPHVNPAF 1025
                         GFD AFMGRG GYGGFSGP F GMLPPFQ VN MGLPGVAPHVNPAF
Sbjct: 415  PPGMMHPQGMMGPGFDLAFMGRGGGYGGFSGPPFQGMLPPFQGVNSMGLPGVAPHVNPAF 474

Query: 1024 FXXXXXXXXXXXXXXXXXXGPHSGMWNDPNMXXXXXXXXXXXXXESSYGGEDNASEYGYG 845
            F                  GPHSGMWNDPNM             ESSYGGEDNASEYGYG
Sbjct: 475  FGRGMNPNGMGMMGNPGMVGPHSGMWNDPNM---GGWGGEEHGRESSYGGEDNASEYGYG 531

Query: 844  EASLDKGVRPSAASREKERNSERDWSINSXXXXXXXXXXXXXXXXXXXXXXXXKDGYRDY 665
            E S DK VR SAA REKER SER++                            KD YR++
Sbjct: 532  EGSHDKSVRSSAAPREKERTSEREY---PERKHREERENDGERNDRDSKYREEKDRYREH 588

Query: 664  RNKERDLGYEDDWDKGQXXXXXXXXRAVPEEDHRSRSRDADYGKRRRIPSE 512
            R+KER+ GY+DDWD+GQ         AV EEDHRSRSRDADYGKRRR+PSE
Sbjct: 589  RHKERESGYDDDWDRGQSSRSRSRSGAVQEEDHRSRSRDADYGKRRRMPSE 639


>ref|XP_002515040.1| RNA binding protein, putative [Ricinus communis]
            gi|223546091|gb|EEF47594.1| RNA binding protein, putative
            [Ricinus communis]
          Length = 644

 Score =  617 bits (1592), Expect = e-173
 Identities = 350/652 (53%), Positives = 409/652 (62%), Gaps = 12/652 (1%)
 Frame = -3

Query: 2431 VADEQLDYGDGEYG--QKMQYHQVGAIPALVEEEMIGEXXXXXDLYNDVNVGEGFLQLQQ 2258
            +ADEQ+DY D EYG  QK+QY   GAIPAL EEEM GE     DLYNDVN+GE FLQ+ +
Sbjct: 1    MADEQIDYEDEEYGGAQKLQYQGSGAIPALAEEEM-GEDDEYDDLYNDVNIGENFLQMHR 59

Query: 2257 SEAQMPAPGVGNGGSRAPKANVSDARNEARVLQEVNIPGVAKEQNYSI--QFPEQKSGLP 2084
            SEA    P VGNGG +   +N  D R E+   Q +NIPGVA E  YS    FPEQ    P
Sbjct: 60   SEAPPAPPSVGNGGFQPRNSN--DLRVESGGSQGLNIPGVAVESKYSTGTHFPEQNVKGP 117

Query: 2083 ADRRPEQIVDAS--QRGRISELTHKSQAGHLGFQGSVPMPQKIAADPINLSGKVAGEPSP 1910
                      +S  Q+ R+ E+T+ SQA ++GFQGS   P  I  DP +++ K++ +P+P
Sbjct: 118  EIGSVGYPDGSSIAQKTRVMEMTNDSQARNMGFQGSTSGPSNIGVDPSDMNNKISNDPTP 177

Query: 1909 LPNPTVGSSRGVPEIPASRMNPSSNVNVNRMVDNENLIRPAVENGNTMLFVGELHWWTTD 1730
            +PN   G  R +P++PAS+MN   N++ NR   NEN IRP +ENG+TML+VGELHWWTTD
Sbjct: 178  VPN--AGVPRVIPQLPASQMN--MNMDTNRSATNENQIRPPLENGSTMLYVGELHWWTTD 233

Query: 1729 AELETVLTQYGMVKEIKFFDERASGKSKGYCQVEFYDPAAASACKDGMNGYVFNGRACVV 1550
            AELE VL+QYGMVKEIKFFDERASGKSKGYCQVEFYD AAA+ACK+GMNG++FNGRACVV
Sbjct: 234  AELENVLSQYGMVKEIKFFDERASGKSKGYCQVEFYDAAAAAACKEGMNGHLFNGRACVV 293

Query: 1549 AFATPQTIKQMGASYMNKTQAQAPSQPQGRRPMNDGAGRGNGANYSSGDAGRNFGRGGWV 1370
            AFA+ QT+KQMGASYMNK Q Q  SQ QGRRPMNDGAGRG   NY  GDAGRNFGRGGW 
Sbjct: 294  AFASQQTLKQMGASYMNKNQGQPQSQNQGRRPMNDGAGRGGNMNYQGGDAGRNFGRGGWG 353

Query: 1369 RGGQQL--XXXXXXXXXXXXXXXXGTKNMIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1196
            RGGQ +                  G KN++                              
Sbjct: 354  RGGQGILNRGPGGGGRMGGRGGSMGAKNIVGGAGGVGSGANGGGYGQGLAGPAFGGPAGA 413

Query: 1195 XXXXXXXXXXGFDPAFMGRGAGYGGFSGPAFPGMLPPFQAVNPMGLPGVAPHVNPAFFXX 1016
                      GFDP +MGRGAGYGGF+GP FPGMLP F AVN MGL GVAPHVNPAFF  
Sbjct: 414  MLPPQSMMRAGFDPTYMGRGAGYGGFAGPGFPGMLPSFPAVNAMGLAGVAPHVNPAFFGR 473

Query: 1015 XXXXXXXXXXXXXXXXGPHSGMWNDPNMXXXXXXXXXXXXXESSYGGEDNASEYGYGEAS 836
                            GP++GMW+D +M             ESSYGG+D ASEYGYGE +
Sbjct: 474  GMAPNGMGMMGPSGMDGPNAGMWSDTSM-GGWGEEPGRRTRESSYGGDDGASEYGYGEVN 532

Query: 835  LDKGVRPSAASREKERNSERDWSINS---XXXXXXXXXXXXXXXXXXXXXXXXKDGYRDY 665
             +KG R SAASREKER SERDWS NS                           K+ YRD+
Sbjct: 533  HEKGARSSAASREKERASERDWSGNSDRRHRDDREHDWDRSEREHKEHRYREEKESYRDH 592

Query: 664  RNKERDLGYEDDWDKGQ-XXXXXXXXRAVPEEDHRSRSRDADYGKRRRIPSE 512
            R +ERD GYEDDWD+GQ         RAVPEED+RSRSRDADYGKRRR+PSE
Sbjct: 593  RQRERDSGYEDDWDRGQSSSRSRSRSRAVPEEDYRSRSRDADYGKRRRLPSE 644


>ref|XP_006483997.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
            CG7185-like isoform X1 [Citrus sinensis]
          Length = 658

 Score =  616 bits (1588), Expect = e-173
 Identities = 341/661 (51%), Positives = 400/661 (60%), Gaps = 18/661 (2%)
 Frame = -3

Query: 2440 MDPVADEQLDYGDGEYG--QKMQYHQVGAIPALVEEEMIGEXXXXXDLYNDVNVGEGFLQ 2267
            MD +A+EQ+DY + EYG  QKMQY   GAIPAL +EE++GE     DLYNDVNVG+G LQ
Sbjct: 1    MDSMAEEQIDYEEEEYGGAQKMQYQGGGAIPALADEELMGEDDEYDDLYNDVNVGDGLLQ 60

Query: 2266 LQQSEAQMPAPGVGNGGSRAPKANVSDARNEARVLQEVNIPGVAKEQNYS---IQFPEQK 2096
             QQ EA  P+ GVGNG  +  K +V + + +A V Q  N+PGV+ E  Y+     FP Q 
Sbjct: 61   FQQPEAPPPSAGVGNGRLQVKKTDVPEQQVQAGVSQGSNVPGVSVEGKYTNAGTHFPAQN 120

Query: 2095 SGLPADRRPEQI-------VDASQRGRISELTHKSQAGHLGFQGSVPMPQKIAADPINLS 1937
                A  RP             SQ+G + E TH +   ++GFQGS   P +   DP N+ 
Sbjct: 121  DVQVAVNRPNMGSGNYPDGASVSQKGSVQETTHDAHVRNMGFQGSTSGPSRTGVDPSNMP 180

Query: 1936 GKVAGEPSPLPNPTVGSSRGVPEIPASRMNPSSNVNVNRMVDNENLIRPAVENGNTMLFV 1757
            G+VA EP+P+ NP     +G   IPA++M    N+NVNR + NEN IRP +ENG TMLFV
Sbjct: 181  GRVANEPAPVLNPGAAGPQGAL-IPANQMGV--NINVNRAMVNENQIRPPLENGGTMLFV 237

Query: 1756 GELHWWTTDAELETVLTQYGMVKEIKFFDERASGKSKGYCQVEFYDPAAASACKDGMNGY 1577
            GELHWWTTDAELE+VL+QYG VKEIKFFDERASGKSKGYCQVEF+D AAA+ACKDGMNG+
Sbjct: 238  GELHWWTTDAELESVLSQYGRVKEIKFFDERASGKSKGYCQVEFFDAAAAAACKDGMNGH 297

Query: 1576 VFNGRACVVAFATPQTIKQMGASYMNKTQAQAPSQPQGRRPMNDGAGRGNGANYSSGDAG 1397
            VFNGR CVVAFA+PQT+KQMGASYMNK Q Q  SQ QGRRPMNDG GRG   NY SGD G
Sbjct: 298  VFNGRPCVVAFASPQTLKQMGASYMNKNQGQPQSQTQGRRPMNDGGGRGGNMNYQSGDGG 357

Query: 1396 RNFGRGGWVRGGQQLXXXXXXXXXXXXXXXXGTKNMI--XXXXXXXXXXXXXXXXXXXXX 1223
            RNFGRGGW RGGQ +                G +NMI                       
Sbjct: 358  RNFGRGGWGRGGQGVPNRGPGGGAMRGRGPMGARNMIGSSSGAGSGVGHAAGGGYGQGLA 417

Query: 1222 XXXXXXXXXXXXXXXXXXXGFDPAFMGRGAGYGGFSGPAFPGMLPPFQAVNPMGLPGVAP 1043
                               GFDP +MGRG GYGGFSGP FPGMLP F AVN MGL GVAP
Sbjct: 418  GPGFGGPAGGMMHPQNMMGGFDPTYMGRGGGYGGFSGPGFPGMLPSFPAVNAMGLAGVAP 477

Query: 1042 HVNPAFFXXXXXXXXXXXXXXXXXXGPHSGMWNDPNMXXXXXXXXXXXXXESSYGGEDNA 863
            HVNPAFF                  GPH GMW D +M             ESSYGG+D A
Sbjct: 478  HVNPAFFNRGMAANGMGMMGSSGMDGPHPGMWTDSSMGGWLGEEHGRRTRESSYGGDDGA 537

Query: 862  SEYGYGEASLDKGVRPSAASREKERNSERDWSINS---XXXXXXXXXXXXXXXXXXXXXX 692
            S+YGYGEA+ +KG R +AASREK+R SERDWS N+                         
Sbjct: 538  SDYGYGEANHEKGARSTAASREKDRGSERDWSGNTDRRHREEREQDWDRSERDHRDHRHR 597

Query: 691  XXKDGYRDYRNKERDLGYEDDWDKG-QXXXXXXXXRAVPEEDHRSRSRDADYGKRRRIPS 515
              KD YRD R ++RD  Y+D+WD+G          RA+P+EDHRSRSRD DYGKRRR+PS
Sbjct: 598  EEKDSYRDRRQRDRDSTYDDNWDRGPSSSRSRSRSRAIPDEDHRSRSRDVDYGKRRRLPS 657

Query: 514  E 512
            E
Sbjct: 658  E 658


>ref|XP_006438179.1| hypothetical protein CICLE_v10030915mg [Citrus clementina]
            gi|557540375|gb|ESR51419.1| hypothetical protein
            CICLE_v10030915mg [Citrus clementina]
          Length = 658

 Score =  615 bits (1587), Expect = e-173
 Identities = 341/661 (51%), Positives = 400/661 (60%), Gaps = 18/661 (2%)
 Frame = -3

Query: 2440 MDPVADEQLDYGDGEYG--QKMQYHQVGAIPALVEEEMIGEXXXXXDLYNDVNVGEGFLQ 2267
            MD +A+EQ+DY + EYG  QKMQY   GAIPAL +EE++GE     DLYNDVNVG+G LQ
Sbjct: 1    MDSMAEEQIDYEEEEYGGAQKMQYQGGGAIPALADEELMGEDDEYDDLYNDVNVGDGLLQ 60

Query: 2266 LQQSEAQMPAPGVGNGGSRAPKANVSDARNEARVLQEVNIPGVAKEQNYS---IQFPEQK 2096
             QQ EA  P+ GVGNG  +  K +V + + +A V Q  N+PGV+ E  Y+     FP Q 
Sbjct: 61   FQQPEAPPPSAGVGNGRLQVKKTDVPEQQVQAGVSQGSNVPGVSVEGKYTNAGTHFPAQN 120

Query: 2095 SGLPADRRPEQI-------VDASQRGRISELTHKSQAGHLGFQGSVPMPQKIAADPINLS 1937
                A  RP             SQ+G + E TH +   ++GFQGS   P +   DP N+ 
Sbjct: 121  DVQVAVNRPNMGSGNYPDGASVSQKGSVQETTHDAHVRNMGFQGSTSGPPRTGVDPSNMP 180

Query: 1936 GKVAGEPSPLPNPTVGSSRGVPEIPASRMNPSSNVNVNRMVDNENLIRPAVENGNTMLFV 1757
            G+VA EP+P+ NP     +G   IPA++M    N+NVNR + NEN IRP +ENG TMLFV
Sbjct: 181  GRVANEPAPVLNPGAAGPQGAL-IPANQMGV--NINVNRAMVNENQIRPPLENGGTMLFV 237

Query: 1756 GELHWWTTDAELETVLTQYGMVKEIKFFDERASGKSKGYCQVEFYDPAAASACKDGMNGY 1577
            GELHWWTTDAELE+VL+QYG VKEIKFFDERASGKSKGYCQVEF+D AAA+ACKDGMNG+
Sbjct: 238  GELHWWTTDAELESVLSQYGRVKEIKFFDERASGKSKGYCQVEFFDAAAAAACKDGMNGH 297

Query: 1576 VFNGRACVVAFATPQTIKQMGASYMNKTQAQAPSQPQGRRPMNDGAGRGNGANYSSGDAG 1397
            VFNGR CVVAFA+PQT+KQMGASYMNK Q Q  SQ QGRRPMNDG GRG   NY SGD G
Sbjct: 298  VFNGRPCVVAFASPQTLKQMGASYMNKNQGQPQSQTQGRRPMNDGGGRGGNMNYQSGDGG 357

Query: 1396 RNFGRGGWVRGGQQLXXXXXXXXXXXXXXXXGTKNMI--XXXXXXXXXXXXXXXXXXXXX 1223
            RNFGRGGW RGGQ +                G KNM+                       
Sbjct: 358  RNFGRGGWGRGGQGVPNRGPGGGAMRGRGPMGAKNMMGSSSGAGSGAGPAAGGGYGQGLA 417

Query: 1222 XXXXXXXXXXXXXXXXXXXGFDPAFMGRGAGYGGFSGPAFPGMLPPFQAVNPMGLPGVAP 1043
                               GFDP +MGRG GYGGFSGP FPGMLP F AVN MGL GVAP
Sbjct: 418  GPGFGGPAGGMMHPQNMMGGFDPTYMGRGGGYGGFSGPGFPGMLPSFPAVNAMGLAGVAP 477

Query: 1042 HVNPAFFXXXXXXXXXXXXXXXXXXGPHSGMWNDPNMXXXXXXXXXXXXXESSYGGEDNA 863
            HVNPAFF                  GPH GMW D +M             ESSYGG+D A
Sbjct: 478  HVNPAFFNRGMAANGMGMMGSSGMDGPHPGMWTDSSMGGWVGEEHGRRTRESSYGGDDGA 537

Query: 862  SEYGYGEASLDKGVRPSAASREKERNSERDWSINS---XXXXXXXXXXXXXXXXXXXXXX 692
            S+YGYGEA+ +KG R +AASREK+R SERDWS N+                         
Sbjct: 538  SDYGYGEANHEKGARSTAASREKDRGSERDWSGNTDRRHREEREQDWDRSERDHRDHRHR 597

Query: 691  XXKDGYRDYRNKERDLGYEDDWDKG-QXXXXXXXXRAVPEEDHRSRSRDADYGKRRRIPS 515
              KD YRD R ++RD  Y+D+WD+G          RA+P+EDHRSRSRD DYGKRRR+PS
Sbjct: 598  EEKDSYRDRRQRDRDSTYDDNWDRGPSSSRSRSRSRAIPDEDHRSRSRDVDYGKRRRLPS 657

Query: 514  E 512
            E
Sbjct: 658  E 658


>ref|XP_010650880.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
            CG7185 isoform X2 [Vitis vinifera]
            gi|731372808|ref|XP_010650883.1| PREDICTED: cleavage and
            polyadenylation specificity factor subunit CG7185 isoform
            X2 [Vitis vinifera] gi|731372811|ref|XP_010650886.1|
            PREDICTED: cleavage and polyadenylation specificity
            factor subunit CG7185 isoform X2 [Vitis vinifera]
          Length = 650

 Score =  614 bits (1584), Expect = e-173
 Identities = 346/656 (52%), Positives = 409/656 (62%), Gaps = 13/656 (1%)
 Frame = -3

Query: 2440 MDPVADEQLDYGDGEYG--QKMQYHQVGAIPALVEEEMIGEXXXXXDLYNDVNVGEGFLQ 2267
            MDP+A+EQLDY D EYG  QKM +   GAI AL ++E++GE     DLYNDVNVGEGFLQ
Sbjct: 1    MDPMAEEQLDYEDEEYGGAQKMPFQGGGAISALADDELMGEDDEYDDLYNDVNVGEGFLQ 60

Query: 2266 LQQSEAQMPAPGVGNGGSRAPKANVSDARNEARVLQEVNIPGVAKEQNYSI-QFPEQKSG 2090
            + +SEA  P+  +  G  +A K +V   + EA   Q + IPGV+ E  YS   F E+K G
Sbjct: 61   MHRSEAPAPSGVMAGGPFQAHKTDVPPQKLEAGTSQGLIIPGVSIEGKYSNPHFHEKKEG 120

Query: 2089 LPADRRPEQIVDA-------SQRGRISELTHKSQAGHLGFQGSVPMPQKIAADPINLSGK 1931
              A + PE    +       SQ+GR+ E+TH +Q  +LGFQGS P+PQK  A+P ++ GK
Sbjct: 121  PMAVKGPEMGSTSHLDGPSVSQKGRVLEMTHDTQVRNLGFQGSTPIPQKTGAEPSDVHGK 180

Query: 1930 VAGEPSPLPNPTVGSSRGVPEIPASRMNPSSNVNVNRMVDNENLIRPAVENGNTMLFVGE 1751
            +A E +P+ N   G  R VP++ +++M    NVNVNR + NEN IRPAV+NG TMLFVGE
Sbjct: 181  IANESTPVLNSGTGGPRAVPQMLSNQMG--MNVNVNRPMVNENQIRPAVDNGATMLFVGE 238

Query: 1750 LHWWTTDAELETVLTQYGMVKEIKFFDERASGKSKGYCQVEFYDPAAASACKDGMNGYVF 1571
            LHWWTTDAELE+VL+QYG VKEIKFFDERASGKSKGYCQVEFYD +AA+ACK+GMNGY+F
Sbjct: 239  LHWWTTDAELESVLSQYGRVKEIKFFDERASGKSKGYCQVEFYDASAAAACKEGMNGYIF 298

Query: 1570 NGRACVVAFATPQTIKQMGASYMNKTQAQAPSQPQGRRPMNDGAGRGNGANYSSGDAGRN 1391
            NGRACVVAFA+PQT+KQMGASYMNKTQAQ  SQ QGRRPMNDG GRG G N   GDAGRN
Sbjct: 299  NGRACVVAFASPQTLKQMGASYMNKTQAQ--SQSQGRRPMNDGVGRGGGMNMQGGDAGRN 356

Query: 1390 FGRGGWVRGGQQL--XXXXXXXXXXXXXXXXGTKNMIXXXXXXXXXXXXXXXXXXXXXXX 1217
            +GRGGW RGGQ +                  G KNM+                       
Sbjct: 357  YGRGGWGRGGQGILNRGPGGGGPMRGRGGAVGAKNMV--GNTAGVGASGGGYGQGLAGPT 414

Query: 1216 XXXXXXXXXXXXXXXXXGFDPAFMGRGAGYGGFSGPAFPGMLPPFQAVNPMGLPGVAPHV 1037
                             GFDP +MGRG  YGGFSG AFPGM+P F AVN MGL GVAPHV
Sbjct: 415  FGGPAGGLMHPQGMMGSGFDPTYMGRGGAYGGFSGSAFPGMVPSFPAVNTMGLAGVAPHV 474

Query: 1036 NPAFFXXXXXXXXXXXXXXXXXXGPHSGMWNDPNMXXXXXXXXXXXXXESSYGGEDNASE 857
            NPAFF                  G H+GMW D +M             ESSYGG+D AS+
Sbjct: 475  NPAFFGRGMAANGMGMMGATGMDGHHAGMWTDTSMGGWGGEEHGRRTRESSYGGDDGASD 534

Query: 856  YGYGEASLDKGVRPSAASREKERNSERDWSINSXXXXXXXXXXXXXXXXXXXXXXXXKDG 677
            YGYGE + +K  R + ASREKER SERDWS NS                        KDG
Sbjct: 535  YGYGEVNHEKVGRSNTASREKERGSERDWSGNSERRHRDEREQDWERSDKDHRYREEKDG 594

Query: 676  YRDYRNKERDLGYEDDWDKGQ-XXXXXXXXRAVPEEDHRSRSRDADYGKRRRIPSE 512
            YRD+R +ERD   EDDWD+GQ         RAV +EDHRSRSRD DYGKRRR+PSE
Sbjct: 595  YRDHRQRERDFNNEDDWDRGQSSSRSRSRSRAVADEDHRSRSRDGDYGKRRRLPSE 650


>ref|XP_002282072.3| PREDICTED: cleavage and polyadenylation specificity factor subunit 6
            isoform X1 [Vitis vinifera]
          Length = 656

 Score =  614 bits (1584), Expect = e-173
 Identities = 346/656 (52%), Positives = 409/656 (62%), Gaps = 13/656 (1%)
 Frame = -3

Query: 2440 MDPVADEQLDYGDGEYG--QKMQYHQVGAIPALVEEEMIGEXXXXXDLYNDVNVGEGFLQ 2267
            MDP+A+EQLDY D EYG  QKM +   GAI AL ++E++GE     DLYNDVNVGEGFLQ
Sbjct: 7    MDPMAEEQLDYEDEEYGGAQKMPFQGGGAISALADDELMGEDDEYDDLYNDVNVGEGFLQ 66

Query: 2266 LQQSEAQMPAPGVGNGGSRAPKANVSDARNEARVLQEVNIPGVAKEQNYSI-QFPEQKSG 2090
            + +SEA  P+  +  G  +A K +V   + EA   Q + IPGV+ E  YS   F E+K G
Sbjct: 67   MHRSEAPAPSGVMAGGPFQAHKTDVPPQKLEAGTSQGLIIPGVSIEGKYSNPHFHEKKEG 126

Query: 2089 LPADRRPEQIVDA-------SQRGRISELTHKSQAGHLGFQGSVPMPQKIAADPINLSGK 1931
              A + PE    +       SQ+GR+ E+TH +Q  +LGFQGS P+PQK  A+P ++ GK
Sbjct: 127  PMAVKGPEMGSTSHLDGPSVSQKGRVLEMTHDTQVRNLGFQGSTPIPQKTGAEPSDVHGK 186

Query: 1930 VAGEPSPLPNPTVGSSRGVPEIPASRMNPSSNVNVNRMVDNENLIRPAVENGNTMLFVGE 1751
            +A E +P+ N   G  R VP++ +++M    NVNVNR + NEN IRPAV+NG TMLFVGE
Sbjct: 187  IANESTPVLNSGTGGPRAVPQMLSNQMG--MNVNVNRPMVNENQIRPAVDNGATMLFVGE 244

Query: 1750 LHWWTTDAELETVLTQYGMVKEIKFFDERASGKSKGYCQVEFYDPAAASACKDGMNGYVF 1571
            LHWWTTDAELE+VL+QYG VKEIKFFDERASGKSKGYCQVEFYD +AA+ACK+GMNGY+F
Sbjct: 245  LHWWTTDAELESVLSQYGRVKEIKFFDERASGKSKGYCQVEFYDASAAAACKEGMNGYIF 304

Query: 1570 NGRACVVAFATPQTIKQMGASYMNKTQAQAPSQPQGRRPMNDGAGRGNGANYSSGDAGRN 1391
            NGRACVVAFA+PQT+KQMGASYMNKTQAQ  SQ QGRRPMNDG GRG G N   GDAGRN
Sbjct: 305  NGRACVVAFASPQTLKQMGASYMNKTQAQ--SQSQGRRPMNDGVGRGGGMNMQGGDAGRN 362

Query: 1390 FGRGGWVRGGQQL--XXXXXXXXXXXXXXXXGTKNMIXXXXXXXXXXXXXXXXXXXXXXX 1217
            +GRGGW RGGQ +                  G KNM+                       
Sbjct: 363  YGRGGWGRGGQGILNRGPGGGGPMRGRGGAVGAKNMV--GNTAGVGASGGGYGQGLAGPT 420

Query: 1216 XXXXXXXXXXXXXXXXXGFDPAFMGRGAGYGGFSGPAFPGMLPPFQAVNPMGLPGVAPHV 1037
                             GFDP +MGRG  YGGFSG AFPGM+P F AVN MGL GVAPHV
Sbjct: 421  FGGPAGGLMHPQGMMGSGFDPTYMGRGGAYGGFSGSAFPGMVPSFPAVNTMGLAGVAPHV 480

Query: 1036 NPAFFXXXXXXXXXXXXXXXXXXGPHSGMWNDPNMXXXXXXXXXXXXXESSYGGEDNASE 857
            NPAFF                  G H+GMW D +M             ESSYGG+D AS+
Sbjct: 481  NPAFFGRGMAANGMGMMGATGMDGHHAGMWTDTSMGGWGGEEHGRRTRESSYGGDDGASD 540

Query: 856  YGYGEASLDKGVRPSAASREKERNSERDWSINSXXXXXXXXXXXXXXXXXXXXXXXXKDG 677
            YGYGE + +K  R + ASREKER SERDWS NS                        KDG
Sbjct: 541  YGYGEVNHEKVGRSNTASREKERGSERDWSGNSERRHRDEREQDWERSDKDHRYREEKDG 600

Query: 676  YRDYRNKERDLGYEDDWDKGQ-XXXXXXXXRAVPEEDHRSRSRDADYGKRRRIPSE 512
            YRD+R +ERD   EDDWD+GQ         RAV +EDHRSRSRD DYGKRRR+PSE
Sbjct: 601  YRDHRQRERDFNNEDDWDRGQSSSRSRSRSRAVADEDHRSRSRDGDYGKRRRLPSE 656


>ref|XP_012085551.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
            6-like [Jatropha curcas] gi|802723892|ref|XP_012085552.1|
            PREDICTED: cleavage and polyadenylation specificity
            factor subunit 6-like [Jatropha curcas]
            gi|802723894|ref|XP_012085553.1| PREDICTED: cleavage and
            polyadenylation specificity factor subunit 6-like
            [Jatropha curcas] gi|643714049|gb|KDP26714.1|
            hypothetical protein JCGZ_17872 [Jatropha curcas]
          Length = 656

 Score =  613 bits (1581), Expect = e-172
 Identities = 348/662 (52%), Positives = 410/662 (61%), Gaps = 22/662 (3%)
 Frame = -3

Query: 2431 VADEQLDYGDGEYG--QKMQYHQVGAIPALVEEEMIGEXXXXXDLYNDVNVGEGFLQLQQ 2258
            +ADEQ+DY D EYG  QKMQY   GAIPAL EEEM GE     DLYNDVNVGE FLQ+ Q
Sbjct: 1    MADEQIDYEDEEYGGNQKMQYQGSGAIPALAEEEM-GEDDEYDDLYNDVNVGENFLQMHQ 59

Query: 2257 SEAQMPAPGVGNGGSRAPKANVSDARNEARVLQEVNIPGVAKEQNYS---IQFPEQKSGL 2087
            S+   P   VG+GG +    NV++++ E    Q + IP VA E  YS     FPE K   
Sbjct: 60   SQVPPPPTSVGSGGFQTQ--NVNESKVETGGSQGLKIPEVAVEGKYSDPGTHFPEPKDVP 117

Query: 2086 PADRRPEQIVDA-------SQRGRISELTHKSQAGHLGFQGSVPMPQKIAADPINLSGKV 1928
               + PE    A       +Q+GR+ E+TH +QA ++GF GS  +P  I  DP ++S K 
Sbjct: 118  MGVKGPEMGSVAYSDGSSIAQKGRVMEMTHDAQARNIGFHGSSSVPSNIGVDPSDMSRKT 177

Query: 1927 AGEPSPLPNPTVGSSRGVPEIPASRMNPSSNVNVNRMVDNENLIRPAVENGNTMLFVGEL 1748
            A EP+P+PN      RG+P++P +++  S N++VNR   NEN IRP VENG+T+LFVGEL
Sbjct: 178  ANEPAPVPNTAATGPRGMPQLPGNQI--SINMDVNRPTVNENQIRPPVENGSTVLFVGEL 235

Query: 1747 HWWTTDAELETVLTQYGMVKEIKFFDERASGKSKGYCQVEFYDPAAASACKDGMNGYVFN 1568
            HWWTTDAELE+VL+QYG VKEIKFFDERASGKSKG+CQVEFYD AAA+ACK+GMNG+VFN
Sbjct: 236  HWWTTDAELESVLSQYGRVKEIKFFDERASGKSKGFCQVEFYDAAAAAACKEGMNGHVFN 295

Query: 1567 GRACVVAFATPQTIKQMGASYMNKTQAQAPSQPQGRRPMNDGAGRGNGANYSSGDAGRNF 1388
            GR CVVAFA+PQT+KQMGASYMNKTQ Q+ +Q QGRRPMNDGAGRG+  NY  GDAGRNF
Sbjct: 296  GRPCVVAFASPQTLKQMGASYMNKTQGQSQTQNQGRRPMNDGAGRGDNMNYQGGDAGRNF 355

Query: 1387 GRGGWVRGGQ-QLXXXXXXXXXXXXXXXXGTKNMIXXXXXXXXXXXXXXXXXXXXXXXXX 1211
            GRGGW RGGQ  +                G KNMI                         
Sbjct: 356  GRGGWGRGGQGMMNRGPGGGGPMRGRGAMGPKNMIGGAGGVGSGANGGGYGQGLVGPAFG 415

Query: 1210 XXXXXXXXXXXXXXXGFDPAFMGRGAGYGGFSGPAFPGMLPPFQAVNPMGLPGVAPHVNP 1031
                           GFDP +MGRGA YGGF+GP FPGMLP F AVN MGL GVAPHVNP
Sbjct: 416  GLAGGMMPPQNMMGAGFDPTYMGRGAAYGGFAGPGFPGMLPSFPAVNAMGLAGVAPHVNP 475

Query: 1030 AFFXXXXXXXXXXXXXXXXXXGPHSGMWNDPNMXXXXXXXXXXXXXESSYGGEDNASEYG 851
            AFF                  GP++GMW+D +M             ESSYGG+D ASEYG
Sbjct: 476  AFFGRGMAPNGMGMMGPSGMDGPNAGMWSDTSM-SGWGEEPGRRTRESSYGGDDGASEYG 534

Query: 850  YGEASLDKGVRPSAASREKERNSERDWSINS--------XXXXXXXXXXXXXXXXXXXXX 695
            YGE + +KG R SAASREKER  ERDWS NS                             
Sbjct: 535  YGEVNNEKGARSSAASREKERVPERDWSGNSDRRHRDEREHEWDRSEREHREREHRDQRY 594

Query: 694  XXXKDGYRDYRNKERDLGYEDDWDKGQ-XXXXXXXXRAVPEEDHRSRSRDADYGKRRRIP 518
               KD YR++R +ERD GYEDDWD+GQ         RAVPEED+RSRSRDADYGKRRR+P
Sbjct: 595  REEKDSYREHRQRERDSGYEDDWDRGQSSSKSRTRSRAVPEEDYRSRSRDADYGKRRRLP 654

Query: 517  SE 512
            +E
Sbjct: 655  AE 656


>ref|XP_012085540.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
            6-like [Jatropha curcas] gi|802723858|ref|XP_012085541.1|
            PREDICTED: cleavage and polyadenylation specificity
            factor subunit 6-like [Jatropha curcas]
            gi|643714040|gb|KDP26705.1| hypothetical protein
            JCGZ_17863 [Jatropha curcas]
          Length = 651

 Score =  611 bits (1575), Expect = e-171
 Identities = 343/658 (52%), Positives = 408/658 (62%), Gaps = 18/658 (2%)
 Frame = -3

Query: 2431 VADEQLDYGDGEYG--QKMQYHQVGAIPALVEEEMIGEXXXXXDLYNDVNVGEGFLQLQQ 2258
            +ADEQ+DY D EYG  QKMQY   GAIPAL EEEM GE     DLYNDVNVGE FLQ+ Q
Sbjct: 1    MADEQIDYEDEEYGGAQKMQYQGSGAIPALAEEEM-GEDDEYDDLYNDVNVGENFLQMHQ 59

Query: 2257 SEAQMPAPGVGNGGSRAPKANVSDARNEARVLQEVNIPGVAKEQNYS---IQFPEQKSGL 2087
            SE   P   + +GG +A   NV++ R      Q +NIPG   E  YS     FPEQK  +
Sbjct: 60   SEVPPPTTSISSGGFQAQ--NVNEPRVGTGGSQGLNIPGGVVEGKYSNVETHFPEQKE-V 116

Query: 2086 PADRRPEQIVDA-------SQRGRISELTHKSQAGHLGFQGSVPMPQKIAADPINLSGKV 1928
            P   +  ++          +Q+GR+ E+TH SQA ++GFQGS  +P  +  DP ++S K+
Sbjct: 117  PMGAKGAEMGSVGYPDGSVTQKGRVMEVTHDSQARNIGFQGSSSVPSNVVVDPSDMSRKI 176

Query: 1927 AGEPSPLPNPTVGSSRGVPEIPASRMNPSSNVNVNRMVDNENLIRPAVENGNTMLFVGEL 1748
              EP+P+PN ++   RG+ ++P +++  S N++VNR   NEN IRP VENG+T+LFVGEL
Sbjct: 177  PNEPAPVPNTSISGPRGIQQLPGNQI--SINIDVNRPGMNENQIRPPVENGSTVLFVGEL 234

Query: 1747 HWWTTDAELETVLTQYGMVKEIKFFDERASGKSKGYCQVEFYDPAAASACKDGMNGYVFN 1568
            HWWTTDAELE+VL+QYG VKEIKFFDERASGKSKG+CQVEFYD AAA+ACK+GMNG+VFN
Sbjct: 235  HWWTTDAELESVLSQYGKVKEIKFFDERASGKSKGFCQVEFYDAAAAAACKEGMNGHVFN 294

Query: 1567 GRACVVAFATPQTIKQMGASYMNKTQAQAPSQPQGRRPMNDGAGRGNGANYSSGDAGRNF 1388
            GR CVVAFA+PQT+KQMGASYMNKTQ Q  +Q Q RRPMNDG GRG   NY  GDAGRNF
Sbjct: 295  GRPCVVAFASPQTLKQMGASYMNKTQGQPQTQNQARRPMNDGVGRGGNMNYQGGDAGRNF 354

Query: 1387 GRGGWVRGGQQL--XXXXXXXXXXXXXXXXGTKNMIXXXXXXXXXXXXXXXXXXXXXXXX 1214
            GRGGW RGGQ +                  G KNM+                        
Sbjct: 355  GRGGWGRGGQGMMNRGPVGGGPVRGRGGTMGAKNMVGGGVGVGNGANGGGFGQGLAGPAF 414

Query: 1213 XXXXXXXXXXXXXXXXGFDPAFMGRGAGYGGFSGPAFPGMLPPFQAVNPMGLPGVAPHVN 1034
                            GFDP +MGRGAGYGGF+GP FPGMLP F AVN MGL GVAPHVN
Sbjct: 415  GGPVAGMMPPQNMMGGGFDPTYMGRGAGYGGFAGPGFPGMLPSFPAVNAMGLAGVAPHVN 474

Query: 1033 PAFFXXXXXXXXXXXXXXXXXXGPHSGMWNDPNMXXXXXXXXXXXXXESSYGGEDNASEY 854
            PAFF                  GP++GMW+D +M             ESSYGG+D ASEY
Sbjct: 475  PAFFGRGMAPNGMGMMGPSAMDGPNAGMWSDTSM-GGWGEEPGRRTRESSYGGDDGASEY 533

Query: 853  GYGEASLDKGVRPSAASREKERNSERDWSINS---XXXXXXXXXXXXXXXXXXXXXXXXK 683
            GYGE + +KG R SAASREKER  ERDWS NS                           K
Sbjct: 534  GYGEVNNEKGTRSSAASREKERAPERDWSGNSDRRHRDEREHDWDRSEREHREHRYREEK 593

Query: 682  DGYRDYRNKERDLGYEDDWDKGQ-XXXXXXXXRAVPEEDHRSRSRDADYGKRRRIPSE 512
            D YR++R +ERD GYEDDWD+GQ         RAVPEED+R RSRDADYGKRRR+PS+
Sbjct: 594  DSYREHRRRERDSGYEDDWDRGQSSSRSRSRSRAVPEEDYRPRSRDADYGKRRRLPSD 651


>ref|XP_007044904.1| RNA-binding family protein isoform 1 [Theobroma cacao]
            gi|590695496|ref|XP_007044905.1| RNA-binding family
            protein isoform 1 [Theobroma cacao]
            gi|590695500|ref|XP_007044906.1| RNA-binding family
            protein isoform 1 [Theobroma cacao]
            gi|508708839|gb|EOY00736.1| RNA-binding family protein
            isoform 1 [Theobroma cacao] gi|508708840|gb|EOY00737.1|
            RNA-binding family protein isoform 1 [Theobroma cacao]
            gi|508708841|gb|EOY00738.1| RNA-binding family protein
            isoform 1 [Theobroma cacao]
          Length = 652

 Score =  608 bits (1567), Expect = e-171
 Identities = 336/659 (50%), Positives = 404/659 (61%), Gaps = 16/659 (2%)
 Frame = -3

Query: 2440 MDPVADEQLDYGDGEYG--QKMQYHQVGAIPALVEEEMIGEXXXXXDLYNDVNVGEGFLQ 2267
            MD +A+EQ+D+GD EYG  QKMQY   GAIPAL +EEM+GE     DLYNDVNVGEGFLQ
Sbjct: 1    MDAMAEEQIDFGDEEYGGGQKMQYQGSGAIPALADEEMMGEDDEYDDLYNDVNVGEGFLQ 60

Query: 2266 LQQSEAQMPAPGVGNGGSRAPKANVSDARNEARVLQEVNIPGVA---KEQNYSIQFPEQK 2096
            LQ+SEA +   G+G+ G +A +    + R EA   Q +NIPGV+   K  N S ++PE K
Sbjct: 61   LQRSEAPLQPGGLGSTGLKAQRNEAPEPRVEAGGSQGLNIPGVSVQGKHPNVSARYPE-K 119

Query: 2095 SGLPADRRPEQIVDA-------SQRGRISELTHKSQAGHLGFQGSVPMPQKIAADPINLS 1937
               PA  RPE +  +       SQ+G ++E TH  Q  +LGFQG      K+  DP  + 
Sbjct: 120  EEQPAVNRPEMVSGSYPSGSSISQKGSVTEGTHDKQVKNLGFQGLTSASNKVGIDPSGVP 179

Query: 1936 GKVAGEPSPLPNPTVGSSRGVPEIPASRMNPSSNVNVNRMVDNENLIRPAVENGNTMLFV 1757
             K+A +P+   N   G  +G P +P ++M      NVN  V NEN ++P +ENG TMLFV
Sbjct: 180  QKIANDPAQSLNSGTGGPQGPPHVPPNQMG----TNVNHPVMNENQVQPPIENGPTMLFV 235

Query: 1756 GELHWWTTDAELETVLTQYGMVKEIKFFDERASGKSKGYCQVEFYDPAAASACKDGMNGY 1577
            GELHWWTTDAELE+VL+QYG +KEIKFFDE+ASGKSKGYCQVEFYDP++A+ CK+GMNGY
Sbjct: 236  GELHWWTTDAELESVLSQYGRLKEIKFFDEKASGKSKGYCQVEFYDPSSAAVCKEGMNGY 295

Query: 1576 VFNGRACVVAFATPQTIKQMGASYMNKTQAQAPSQPQGRRPMNDGAGRGNGANYSSGDAG 1397
            +FNGRACVVAFA+PQT+KQMGASYMNK Q Q+ +QPQGRRP N+G GRG   NY SGDAG
Sbjct: 296  MFNGRACVVAFASPQTLKQMGASYMNKNQGQSQAQPQGRRP-NEGLGRGGNLNYQSGDAG 354

Query: 1396 RNFGRGGWVRGGQQLXXXXXXXXXXXXXXXXGTKNMIXXXXXXXXXXXXXXXXXXXXXXX 1217
            RN+GRGGW RGGQ                  G KNM+                       
Sbjct: 355  RNYGRGGWGRGGQGGVNRAGGGGLMRGRGGVGVKNMVGISAGVGNGANGAGAYGQGPGPA 414

Query: 1216 XXXXXXXXXXXXXXXXXGFDPAFMGRGAGYGGFSGPAFPGMLPPFQAVNPMGLPGVAPHV 1037
                             GFDP +M RG GYGGF GP FPGMLP F AVN MGL GVAPHV
Sbjct: 415  FGGPAGGMMHPQGMMGAGFDPTYMVRGGGYGGFPGPGFPGMLPSFPAVNTMGLAGVAPHV 474

Query: 1036 NPAFFXXXXXXXXXXXXXXXXXXGPHSGMWNDPNMXXXXXXXXXXXXXESSYGGEDNASE 857
            NPAFF                  GPH+GMW D +M             ESSYGGED ASE
Sbjct: 475  NPAFFGRGMAPNGMGMMGASGMDGPHAGMWTDASMGGWGGDEHGRRTRESSYGGEDGASE 534

Query: 856  YGYGEASLDKGVRPSAASREKERNSERDWSINS---XXXXXXXXXXXXXXXXXXXXXXXX 686
            YGYG+A+ +KG R S ASREKER SER+WS NS                           
Sbjct: 535  YGYGDANHEKG-RSSGASREKERVSEREWSGNSDRRHRDEKEQDWDRSEREHREHRYREE 593

Query: 685  KDGYRDYRNKERDLGYEDDWDKGQ-XXXXXXXXRAVPEEDHRSRSRDADYGKRRRIPSE 512
            KD YR++R++ERDL Y+DDWD+GQ          A+PEE+HRSRSRD DYGK+RR+PSE
Sbjct: 594  KDSYREHRHRERDLDYDDDWDRGQSSSRSRRRSHAMPEEEHRSRSRDVDYGKKRRLPSE 652


>ref|XP_009359255.1| PREDICTED: cleavage and polyadenylation specificity factor subunit 6
            [Pyrus x bretschneideri]
          Length = 656

 Score =  607 bits (1566), Expect = e-170
 Identities = 334/661 (50%), Positives = 406/661 (61%), Gaps = 18/661 (2%)
 Frame = -3

Query: 2440 MDPVADEQLDYGDGEYG--QKMQYHQVGAIPALVEEEMIGEXXXXXDLYNDVNVGEGFLQ 2267
            M+P+ +EQ+DY D EYG   K+QY   GAI AL +EE++ E     DLYNDVNVGEGF+Q
Sbjct: 1    MEPLGEEQIDYEDEEYGGAHKLQYQGSGAISALADEELMVEDDEFDDLYNDVNVGEGFMQ 60

Query: 2266 LQQSEAQMPAPGVGNGGSRAPKANVSDARNEARVLQEVNIPGVAKEQNYS---IQFPEQK 2096
            + +SEA +P  GVGNGG +A K +V + R ++ V Q++ IPGV+ +  YS    QFPEQ 
Sbjct: 61   MHRSEAPLPTGGVGNGGLQAQKTDVPEPRVQSGVSQDLKIPGVSVQGKYSGAGAQFPEQN 120

Query: 2095 SGLPADRRPE-------QIVDASQRGRISELTHKSQAGHLGFQGSVPMPQKIAADPINLS 1937
               P  + PE            SQ+GR+ ++TH +Q  H+ FQGS  MP  +  D  +++
Sbjct: 121  QP-PVAKEPELGSTGYASGASGSQKGRVMDMTHDTQVRHMAFQGSTTMPPNVGVDSSDIT 179

Query: 1936 GKVAGEPSPLPNPTVGSSRGVPEIPASRMNPSSNVNVNRMVDNENLIRPAVENGNTMLFV 1757
            GK   E  P  NP      G  +IP ++M  S  +N NR + NEN IRP +ENG+  LFV
Sbjct: 180  GKGNSEFVPSLNPASAGPPGATQIPTNQM--SIKINANRPMVNENQIRPPIENGSATLFV 237

Query: 1756 GELHWWTTDAELETVLTQYGMVKEIKFFDERASGKSKGYCQVEFYDPAAASACKDGMNGY 1577
            GELHWWTTDAE+E+V++QYG VKEIKFFDERASGKSKGYCQVEF+D AAA+ACK+GM+GY
Sbjct: 238  GELHWWTTDAEIESVISQYGRVKEIKFFDERASGKSKGYCQVEFHDQAAATACKEGMDGY 297

Query: 1576 VFNGRACVVAFATPQTIKQMGASYMNKTQAQAPSQPQGRRPMNDGAGRGNGANYSSGD-A 1400
            VFNGRACVVAFA+PQT+KQMGASY++K+Q QA +Q  GRRPMNDG GRG G N+ +GD  
Sbjct: 298  VFNGRACVVAFASPQTLKQMGASYLSKSQGQAQAQQPGRRPMNDGGGRGGGVNFQAGDPG 357

Query: 1399 GRNFGRGGWVRGGQQLXXXXXXXXXXXXXXXXGTKNMIXXXXXXXXXXXXXXXXXXXXXX 1220
            GRNFGRGGW RGGQ +                G KNM+                      
Sbjct: 358  GRNFGRGGWGRGGQGVRGPGGGGPMRGRGGAMGAKNMV-GNPAGVGTGTNGGGYGQGLGG 416

Query: 1219 XXXXXXXXXXXXXXXXXXGFDPAFMGRGAGYGGFSGPAFPGMLPPFQAVNPMGLPGVAPH 1040
                              GFDP +MGRG GYGGF GPAFPGMLP F  VN MGL GVAPH
Sbjct: 417  PGFGGPVGMMNPQGMMGSGFDPTYMGRGGGYGGFPGPAFPGMLPQFPGVNTMGLAGVAPH 476

Query: 1039 VNPAFFXXXXXXXXXXXXXXXXXXGPHSGMWNDPNMXXXXXXXXXXXXXESSYGGEDNAS 860
            VNPAFF                  G H+GMWNDP+M             ESSYGG+DNAS
Sbjct: 477  VNPAFFARGMATNGMGMMGSSGMEGHHAGMWNDPSMGAWGGEEHGRRTRESSYGGDDNAS 536

Query: 859  EYGYGEASLDKGVRPSAASREKERNSERDWSINS----XXXXXXXXXXXXXXXXXXXXXX 692
            EYGYG+ + +KG R SAASRE+ER SERDWS NS                          
Sbjct: 537  EYGYGDTNNEKGPRSSAASRERERGSERDWSGNSERRHRDDREQDYERSERGEHREHRYK 596

Query: 691  XXKDGYRDYRNKERDLGYEDDWDKGQ-XXXXXXXXRAVPEEDHRSRSRDADYGKRRRIPS 515
              KD YRD+R ++RD GYEDDWD+GQ         +AVPE+DHRSRSRD DY KRRR+PS
Sbjct: 597  EEKDSYRDHRQRDRDGGYEDDWDRGQSSSRPRSRSKAVPEDDHRSRSRDVDY-KRRRLPS 655

Query: 514  E 512
            E
Sbjct: 656  E 656


>ref|XP_006483998.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
            CG7185-like isoform X1 [Citrus sinensis]
          Length = 655

 Score =  607 bits (1566), Expect = e-170
 Identities = 337/658 (51%), Positives = 394/658 (59%), Gaps = 18/658 (2%)
 Frame = -3

Query: 2431 VADEQLDYGDGEYG--QKMQYHQVGAIPALVEEEMIGEXXXXXDLYNDVNVGEGFLQLQQ 2258
            +A+EQ+DY + EYG  QKMQY   GAIPAL +EE++GE     DLYNDVNVG+G LQ QQ
Sbjct: 1    MAEEQIDYEEDEYGGAQKMQYQGGGAIPALADEELMGEDDEYDDLYNDVNVGDGLLQFQQ 60

Query: 2257 SEAQMPAPGVGNGGSRAPKANVSDARNEARVLQEVNIPGVAKEQNYS---IQFPEQKSGL 2087
             EA  P+ GVGNG  +  K +V + R +    Q  NIPGV+ E  Y+     FP Q    
Sbjct: 61   PEAPPPSAGVGNGRLQVKKTDVPEQRVQVGGSQGSNIPGVSVEGKYTNAGSHFPAQNDVQ 120

Query: 2086 PADRRPEQI-------VDASQRGRISELTHKSQAGHLGFQGSVPMPQKIAADPINLSGKV 1928
             A  RP             SQ+G + E TH +   ++GFQGS   P +   DP N+ G+V
Sbjct: 121  VAVNRPNMGSGNYPDGASVSQKGSVQETTHDAHVRNMGFQGSTSGPSRTGVDPSNMPGRV 180

Query: 1927 AGEPSPLPNPTVGSSRGVPEIPASRMNPSSNVNVNRMVDNENLIRPAVENGNTMLFVGEL 1748
            A EP+P+ NP     +G   IPA++M    N NVNR++ NEN IRP +ENG TMLFVGEL
Sbjct: 181  ANEPAPVLNPGAAGPQGAL-IPANQMGV--NANVNRVMVNENQIRPPLENGGTMLFVGEL 237

Query: 1747 HWWTTDAELETVLTQYGMVKEIKFFDERASGKSKGYCQVEFYDPAAASACKDGMNGYVFN 1568
            HWWTTDAELE+VL+QYG  KEIKFFDERASGKSKGYCQVEF+D AAA+ACKDGMNG+VFN
Sbjct: 238  HWWTTDAELESVLSQYGRAKEIKFFDERASGKSKGYCQVEFFDAAAAAACKDGMNGHVFN 297

Query: 1567 GRACVVAFATPQTIKQMGASYMNKTQAQAPSQPQGRRPMNDGAGRGNGANYSSGDAGRNF 1388
            GR CVVAFA+PQT+KQMGASYMNK Q Q  SQ QG RPMNDG GRG   NY SGD GRNF
Sbjct: 298  GRPCVVAFASPQTLKQMGASYMNKNQGQPQSQNQGSRPMNDGGGRGGNTNYQSGDGGRNF 357

Query: 1387 GRGGWVRGGQQLXXXXXXXXXXXXXXXXGTKNMI--XXXXXXXXXXXXXXXXXXXXXXXX 1214
            GRGGW RGGQ +                G +NMI                          
Sbjct: 358  GRGGWGRGGQGVPNRGPGGGAMRGRGPMGARNMIGSSSGAGSGVGHAAGGGYGQGLAGPG 417

Query: 1213 XXXXXXXXXXXXXXXXGFDPAFMGRGAGYGGFSGPAFPGMLPPFQAVNPMGLPGVAPHVN 1034
                            GFDP +MGRG GYGGFSGP FPGMLP F AVN MGL GVAPHVN
Sbjct: 418  FGGPAGGMMHPQNMMGGFDPTYMGRGGGYGGFSGPGFPGMLPSFPAVNAMGLAGVAPHVN 477

Query: 1033 PAFFXXXXXXXXXXXXXXXXXXGPHSGMWNDPNMXXXXXXXXXXXXXESSYGGEDNASEY 854
            PAFF                  GPH GMW D +M             ESSYGG+D AS+Y
Sbjct: 478  PAFFNRGMAANGMGMMGSSGMDGPHPGMWTDSSMGGWLGEEHGRRTRESSYGGDDGASDY 537

Query: 853  GYGEASLDKGVRPSAASREKERNSERDWSINS---XXXXXXXXXXXXXXXXXXXXXXXXK 683
            GYGEA+ +KG R +AASREK+R SERDWS N+                           K
Sbjct: 538  GYGEANHEKGARSTAASREKDRGSERDWSGNTDRRHREEREQDWDRSERDHRDHRHREEK 597

Query: 682  DGYRDYRNKERDLGYEDDWDKGQ-XXXXXXXXRAVPEEDHRSRSRDADYGKRRRIPSE 512
            D YRD R ++RD  Y+D+WD+GQ          A+P+EDHRSRSRD DYGKRRR+PSE
Sbjct: 598  DSYRDRRQRDRDSTYDDNWDRGQSSSRSRSRSGAIPDEDHRSRSRDVDYGKRRRLPSE 655


>ref|XP_008389755.1| PREDICTED: RNA-binding protein FUS-like [Malus domestica]
            gi|657994880|ref|XP_008389756.1| PREDICTED: RNA-binding
            protein FUS-like [Malus domestica]
          Length = 658

 Score =  607 bits (1565), Expect = e-170
 Identities = 339/663 (51%), Positives = 404/663 (60%), Gaps = 20/663 (3%)
 Frame = -3

Query: 2440 MDPVADEQLDYGDGEYG--QKMQYHQVGAIPALVEEEMIGEXXXXXDLYNDVNVGEGFLQ 2267
            MDP+ DEQ+DY D EYG  QK+QY   GAI AL +EE + E     DLYNDVNVGEGF+Q
Sbjct: 1    MDPMGDEQIDYEDEEYGGSQKLQYQGSGAISALADEEPMVEDDEYDDLYNDVNVGEGFMQ 60

Query: 2266 LQQSEAQMPAPGVGNGGSRAPKANVSDARNEARVLQEVNIPGVAKEQNYS---IQFPEQK 2096
            + +SEA +P  GVGNGG +A K NV + R  A V Q++ IPGV+ +  YS    QFPEQ 
Sbjct: 61   MHRSEAPVPPGGVGNGGLQAQKTNVPEPRARAGVSQDLKIPGVSVQGKYSGAGAQFPEQN 120

Query: 2095 SGLPADRRPEQI-------VDASQRGRISELTHKSQAGHLGFQGSVPMPQKIAADPINLS 1937
               P  + PE            SQ+GR+ E+TH +Q   +GFQGS  +P  +  D  +++
Sbjct: 121  QP-PVAKEPELGSTGYVGGASGSQKGRVMEMTHDTQVRQMGFQGSTTIPPNVGIDSSDIT 179

Query: 1936 GKVAGEPSPLPNPTVGSSRGVPEIPASRMNPSSNVNVNRMVDNENLIRPAVENGNTMLFV 1757
            GK   E  P  NP      G  +IP ++M  S  +N NR + NEN IRP +ENG+ MLFV
Sbjct: 180  GKGNSEYIPSLNPGTAGPPGAAQIPTNQM--SIKINANRPMVNENQIRPPIENGSAMLFV 237

Query: 1756 GELHWWTTDAELETVLTQYGMVKEIKFFDERASGKSKGYCQVEFYDPAAASACKDGMNGY 1577
            GELHWWTTDAE+E+ L+QYG VKEIKFFDERASGKSKGYCQVEF+DPAAA+ACK+GM+GY
Sbjct: 238  GELHWWTTDAEIESXLSQYGRVKEIKFFDERASGKSKGYCQVEFHDPAAATACKEGMDGY 297

Query: 1576 VFNGRACVVAFATPQTIKQMGASYMNKTQAQAPSQPQGRRPMNDGAGRGNGANYSSGD-A 1400
            VFNGRACVVAFA+PQT+KQMGASY++K+Q QA +Q  GRRPMNDG GRG G N+ +GD  
Sbjct: 298  VFNGRACVVAFASPQTLKQMGASYLSKSQXQAQAQQPGRRPMNDGVGRGAGVNFQAGDTG 357

Query: 1399 GRNFGRGGWVRGGQQLXXXXXXXXXXXXXXXXGTKNMIXXXXXXXXXXXXXXXXXXXXXX 1220
            GRNFGRGGW RGGQ                  G KNM+                      
Sbjct: 358  GRNFGRGGWGRGGQGGRGPGGGGPMRGRGGAMGVKNMV-GNPAGVGTGANGGGYGQGLGG 416

Query: 1219 XXXXXXXXXXXXXXXXXXGFDPAFMGRGAGYGGFSGPAFPGMLPPFQAVNPMGLPGVAPH 1040
                              GFDP +MGRG GYGGF GPAFPGMLP F  VN MGL GVAPH
Sbjct: 417  PGFGGPVGMMNPQGMMGSGFDPTYMGRGGGYGGFPGPAFPGMLPQFPGVNTMGLAGVAPH 476

Query: 1039 VNPAFFXXXXXXXXXXXXXXXXXXGPHSGMWNDPNMXXXXXXXXXXXXXESSYGGEDNAS 860
            VNPAFF                  G H+GMWNDP+M             ESSYGG+DNAS
Sbjct: 477  VNPAFFGRGMAANGMGMMGSSGMEGHHAGMWNDPSMGAWGGEEHGRRTRESSYGGDDNAS 536

Query: 859  EYGYGEASLDKGVRPSAASREKERNSERDWSINS----XXXXXXXXXXXXXXXXXXXXXX 692
            EYGYG+ + +KG R SAASRE+ER SERDWS NS                          
Sbjct: 537  EYGYGDTNNEKGARSSAASRERERGSERDWSGNSERRHRDGREQDFERSERGEHREHRYK 596

Query: 691  XXKDGYRDYRNKERDLGYEDDWDKGQ---XXXXXXXXRAVPEEDHRSRSRDADYGKRRRI 521
              KD YR++R ++RD  YEDDWD+GQ           +AVPE+DHRSRSRD DY KRRR+
Sbjct: 597  EEKDSYREHRQRDRDGVYEDDWDRGQSSSRPRSRSRSKAVPEDDHRSRSRDVDY-KRRRL 655

Query: 520  PSE 512
            PSE
Sbjct: 656  PSE 658


>ref|XP_006438180.1| hypothetical protein CICLE_v10030917mg [Citrus clementina]
            gi|567891321|ref|XP_006438181.1| hypothetical protein
            CICLE_v10030917mg [Citrus clementina]
            gi|557540376|gb|ESR51420.1| hypothetical protein
            CICLE_v10030917mg [Citrus clementina]
            gi|557540377|gb|ESR51421.1| hypothetical protein
            CICLE_v10030917mg [Citrus clementina]
          Length = 655

 Score =  605 bits (1560), Expect = e-170
 Identities = 335/658 (50%), Positives = 392/658 (59%), Gaps = 18/658 (2%)
 Frame = -3

Query: 2431 VADEQLDYGDGEYG--QKMQYHQVGAIPALVEEEMIGEXXXXXDLYNDVNVGEGFLQLQQ 2258
            +A+EQ+DY + EYG  QKMQY   GAIPAL +EE++GE     DLYND+NVG+G LQ QQ
Sbjct: 1    MAEEQIDYEEDEYGGAQKMQYQGGGAIPALADEELMGEDDEYDDLYNDINVGDGLLQFQQ 60

Query: 2257 SEAQMPAPGVGNGGSRAPKANVSDARNEARVLQEVNIPGVAKEQNYS---IQFPEQKSGL 2087
             EA  P+ GVGNG  +  K +V + R +    Q  NIPGV+ E  Y+     FP Q    
Sbjct: 61   PEAPPPSAGVGNGRLQVKKTDVPEQRVQVGGSQGSNIPGVSVEGKYTNAGSDFPAQNDVQ 120

Query: 2086 PADRRPEQI-------VDASQRGRISELTHKSQAGHLGFQGSVPMPQKIAADPINLSGKV 1928
             A  RP             SQ+G + E TH +   ++GFQGS   P +   DP N+ G+ 
Sbjct: 121  VAVNRPNMGSGNYPDGASVSQKGSVQETTHDAHVRNMGFQGSTSGPSRTGVDPSNMPGRA 180

Query: 1927 AGEPSPLPNPTVGSSRGVPEIPASRMNPSSNVNVNRMVDNENLIRPAVENGNTMLFVGEL 1748
            A EP+P+ NP     +G   IPA++M    N NVNR++ NEN IRP +ENG TMLFVGEL
Sbjct: 181  ANEPAPVLNPGAAGPQGAL-IPANQMGV--NANVNRVMVNENQIRPPLENGGTMLFVGEL 237

Query: 1747 HWWTTDAELETVLTQYGMVKEIKFFDERASGKSKGYCQVEFYDPAAASACKDGMNGYVFN 1568
            HWWTTDAELE+VL+QYG  KEIKFFDERASGKSKGYCQVEF+D AAA+ACKDGMNG+VFN
Sbjct: 238  HWWTTDAELESVLSQYGRAKEIKFFDERASGKSKGYCQVEFFDAAAAAACKDGMNGHVFN 297

Query: 1567 GRACVVAFATPQTIKQMGASYMNKTQAQAPSQPQGRRPMNDGAGRGNGANYSSGDAGRNF 1388
            GR CVVAFA+PQT+KQMGASYMNK Q Q  SQ QG RPMNDG GRG   NY SGD GRNF
Sbjct: 298  GRPCVVAFASPQTLKQMGASYMNKNQGQPQSQNQGSRPMNDGGGRGGNTNYQSGDGGRNF 357

Query: 1387 GRGGWVRGGQQLXXXXXXXXXXXXXXXXGTKNMI--XXXXXXXXXXXXXXXXXXXXXXXX 1214
            GRGGW RGGQ +                G +NMI                          
Sbjct: 358  GRGGWGRGGQGVPNRGPGGGAMRGRGPMGARNMIGSSSGAGSGAGHAAGGGYGQGLAGPG 417

Query: 1213 XXXXXXXXXXXXXXXXGFDPAFMGRGAGYGGFSGPAFPGMLPPFQAVNPMGLPGVAPHVN 1034
                            GFDP +MGRG GYGGFSGP FPGMLP F AVN MGL GVAPHVN
Sbjct: 418  FGGPAGGMMHPQNMMGGFDPTYMGRGGGYGGFSGPGFPGMLPSFPAVNAMGLAGVAPHVN 477

Query: 1033 PAFFXXXXXXXXXXXXXXXXXXGPHSGMWNDPNMXXXXXXXXXXXXXESSYGGEDNASEY 854
            PAFF                  GPH GMW D +M             ESSYGG+D AS+Y
Sbjct: 478  PAFFNRGMAANGMGMMGSSGMDGPHPGMWTDSSMGGWVGEEHGRRTRESSYGGDDGASDY 537

Query: 853  GYGEASLDKGVRPSAASREKERNSERDWSINS---XXXXXXXXXXXXXXXXXXXXXXXXK 683
            GYGEAS +KG R + ASREK+R SERDWS N+                           K
Sbjct: 538  GYGEASHEKGARSTTASREKDRGSERDWSGNTDRRHREEREQDWDRSERDHRDHRHREEK 597

Query: 682  DGYRDYRNKERDLGYEDDWDKGQ-XXXXXXXXRAVPEEDHRSRSRDADYGKRRRIPSE 512
            D YRD R ++RD  Y+D+WD+GQ          A+P+EDHRSRSRD DYGKRRR+PSE
Sbjct: 598  DSYRDRRQRDRDSTYDDNWDRGQSSSRSRSRSGAIPDEDHRSRSRDVDYGKRRRLPSE 655


>ref|XP_008340137.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
            6-like [Malus domestica]
          Length = 656

 Score =  602 bits (1552), Expect = e-169
 Identities = 334/661 (50%), Positives = 402/661 (60%), Gaps = 18/661 (2%)
 Frame = -3

Query: 2440 MDPVADEQLDYGDGEYG--QKMQYHQVGAIPALVEEEMIGEXXXXXDLYNDVNVGEGFLQ 2267
            MDP+ +EQ+DY D EYG   K+QY   GAI AL +EE + E     DLYNDVNVGEGF+Q
Sbjct: 1    MDPLGEEQIDYEDEEYGGAHKLQYQGSGAISALADEEPMVEDDEFDDLYNDVNVGEGFMQ 60

Query: 2266 LQQSEAQMPAPGVGNGGSRAPKANVSDARNEARVLQEVNIPGVAKEQNYS---IQFPEQK 2096
            + +SEA +P  GVGNGG +A K +V + R +A V Q++ IPGV+ +  YS    QFPEQ 
Sbjct: 61   MHRSEASLPTGGVGNGGLQAQKTDVPEPRVQAGVSQDLKIPGVSVQGKYSGAGAQFPEQN 120

Query: 2095 SGLPADRRPE-------QIVDASQRGRISELTHKSQAGHLGFQGSVPMPQKIAADPINLS 1937
               P  + PE            SQ+GR+ E+TH  Q  H+ FQGS  MP  +  D  +++
Sbjct: 121  QP-PVAKEPELGSTDYVSGASGSQKGRVMEMTHDPQVRHMAFQGSTTMPPNVGVDSSDIT 179

Query: 1936 GKVAGEPSPLPNPTVGSSRGVPEIPASRMNPSSNVNVNRMVDNENLIRPAVENGNTMLFV 1757
            GK   E  P  NP      G  +I  ++M  S  +N NR + NEN IRP +ENG+  LFV
Sbjct: 180  GKGNSEFVPSLNPASAGPPGATQILTNQM--SIKINANRPMVNENQIRPPIENGSATLFV 237

Query: 1756 GELHWWTTDAELETVLTQYGMVKEIKFFDERASGKSKGYCQVEFYDPAAASACKDGMNGY 1577
            GELHWWTTDAE+E+V++QYG VKEIKFFDERASGKSKGYCQVEF+D AAA+ACK+GM+GY
Sbjct: 238  GELHWWTTDAEIESVISQYGRVKEIKFFDERASGKSKGYCQVEFHDQAAATACKEGMDGY 297

Query: 1576 VFNGRACVVAFATPQTIKQMGASYMNKTQAQAPSQPQGRRPMNDGAGRGNGANYSSGD-A 1400
            VFNGRACV A+A+PQT+KQMGASY++K+Q QA +Q  GRRPMNDG GRG G N+ +GD  
Sbjct: 298  VFNGRACVXAYASPQTLKQMGASYLSKSQGQAQAQQPGRRPMNDGGGRGXGVNFQAGDPG 357

Query: 1399 GRNFGRGGWVRGGQQLXXXXXXXXXXXXXXXXGTKNMIXXXXXXXXXXXXXXXXXXXXXX 1220
            GRNFGRGGW RGGQ +                G KNM+                      
Sbjct: 358  GRNFGRGGWGRGGQGVRGPGGGGPMRGRGGVMGAKNMV-GNPAGVGTGANGGGYGQGLGG 416

Query: 1219 XXXXXXXXXXXXXXXXXXGFDPAFMGRGAGYGGFSGPAFPGMLPPFQAVNPMGLPGVAPH 1040
                              GFDP +MGRG GYGGF GPAFPGMLP F  VN MGL GVAPH
Sbjct: 417  PGFGGPVGMMNPQGMMGSGFDPTYMGRGGGYGGFPGPAFPGMLPQFPGVNTMGLAGVAPH 476

Query: 1039 VNPAFFXXXXXXXXXXXXXXXXXXGPHSGMWNDPNMXXXXXXXXXXXXXESSYGGEDNAS 860
            VNPAFF                  G H+GMWNDP+M             ESSYGG+DNAS
Sbjct: 477  VNPAFFGRGMATNGMGMMGSSGMEGHHAGMWNDPSMGTWGGEEHGRRTRESSYGGDDNAS 536

Query: 859  EYGYGEASLDKGVRPSAASREKERNSERDWSINS----XXXXXXXXXXXXXXXXXXXXXX 692
            EYGYG+ + +KG R SAASRE+ER SERDWS NS                          
Sbjct: 537  EYGYGDTNNEKGPRSSAASRERERGSERDWSGNSERRHRDDREQDYERSERGEQREHRYK 596

Query: 691  XXKDGYRDYRNKERDLGYEDDWDKGQ-XXXXXXXXRAVPEEDHRSRSRDADYGKRRRIPS 515
              KD YRD+R ++RD GYEDDWD+GQ         +AVPE+DHRSRSRD DY KRRR+PS
Sbjct: 597  EEKDSYRDHRQRDRDGGYEDDWDRGQSSSRPRSRSKAVPEDDHRSRSRDVDY-KRRRLPS 655

Query: 514  E 512
            E
Sbjct: 656  E 656


>ref|XP_010320954.1| PREDICTED: LOW QUALITY PROTEIN: cleavage and polyadenylation
            specificity factor subunit 6 [Solanum lycopersicum]
          Length = 648

 Score =  601 bits (1549), Expect = e-168
 Identities = 330/651 (50%), Positives = 392/651 (60%), Gaps = 8/651 (1%)
 Frame = -3

Query: 2440 MDPVADEQLDYGDGEY--GQKMQYHQVGAIPALVEEEMIGEXXXXXDLYNDVNVGEGFLQ 2267
            MDP ADEQLDYGD EY    KMQYH  G I AL E+EM+GE      LYNDVN+GEGFL 
Sbjct: 1    MDPTADEQLDYGDEEYRGSHKMQYHVSGTIHALAEDEMLGEDDEYDYLYNDVNIGEGFLX 60

Query: 2266 LQQSEAQMPAPGVGNGGSRAPKANVSDARNEARVLQEVNIPGVAKEQNYS---IQFPEQK 2096
            LQ+S+  +P+   GNG  +  K +   +R      +E  IPG+A ++NY+   +QFP+Q 
Sbjct: 61   LQRSKVPVPSVDAGNGSFQVQKDSFPASRXGGLGSEEAKIPGIATKENYAGTEVQFPQQN 120

Query: 2095 SGLPADRRPEQIVDASQRGRISELTHK--SQAGHLGFQGSVPMPQKIAADPINLSGKVAG 1922
             G   +R  E+  DA+Q+ R S LT    SQ G+ G+QGS+PMPQKI ADP+ +      
Sbjct: 121  GGSLVERETERPADAAQKSRPSALTMNLNSQVGNSGYQGSMPMPQKIGADPMAMPEINVS 180

Query: 1921 EPSPLPNPTVGSSRGVPEIPASRMNPSSNVNVNRMVDNENLIRPAVENGNTMLFVGELHW 1742
            E +PL N  V   R V  +P +++N S NVN+N  + +++  RP++EN NTMLFVGELHW
Sbjct: 181  EATPLVNSVVAGPRVVQHMPTNQLNSSGNVNINNPIISDSXFRPSLENANTMLFVGELHW 240

Query: 1741 WTTDAELETVLTQYGMVKEIKFFDERASGKSKGYCQVEFYDPAAASACKDGMNGYVFNGR 1562
            WTTDAELE+VLTQYG VKEIKFFDERASGKSKGYCQVEF+DP + + CK+G+NGY FNGR
Sbjct: 241  WTTDAELESVLTQYGNVKEIKFFDERASGKSKGYCQVEFFDPGSTATCKEGINGYNFNGR 300

Query: 1561 ACVVAFATPQTIKQMGASYMNKTQAQAPSQPQGRRPMNDGAGRGNGANYSSGDAGRNFGR 1382
             CVVAFAT QTIKQM +SY NKTQ Q  SQPQGR PMN+G GRG G NY+ GDAGRN GR
Sbjct: 301  PCVVAFATAQTIKQMDSSYANKTQNQVQSQPQGRGPMNEGVGRG-GPNYTLGDAGRNLGR 359

Query: 1381 GGWVRGGQQLXXXXXXXXXXXXXXXXGTKNMIXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1202
            G W R    +                G+KNM+                            
Sbjct: 360  GSWGRRETGMPNRGPGGGPVRGRGAMGSKNMM--VNPGAGNGAGGAFGQGLAGPAFGGPL 417

Query: 1201 XXXXXXXXXXXXGFDPAFMGRGAGYGGFSGPAFPGMLPPFQAVNPMGLPGVAPHVNPAFF 1022
                        GFDP+F+GRGAGYGGFSGPAF GM+PPF AVNPMG PGVAPHVNPAFF
Sbjct: 418  AGLMHPQGMMGPGFDPSFIGRGAGYGGFSGPAFSGMMPPFLAVNPMGHPGVAPHVNPAFF 477

Query: 1021 XXXXXXXXXXXXXXXXXXGPHSGMWNDPNMXXXXXXXXXXXXXESSYGGEDNASEYGYGE 842
                              GPH GMW D +              ESSYGGEDNASEYGY  
Sbjct: 478  GRGMAANGMGIMGTAGMDGPHPGMWTDTSGGGWGGEEHGRRTRESSYGGEDNASEYGYRG 537

Query: 841  ASLDKGVRPSAASREKERNSERDWSINSXXXXXXXXXXXXXXXXXXXXXXXXKDGYRDYR 662
             S DK  R S  SREKER SERDWS NS                         D YRDYR
Sbjct: 538  VSHDKEARSSVVSREKERGSERDWSGNSDRRYRDEREHDRDRHDKEHRYREEMDDYRDYR 597

Query: 661  NKERDLGYEDDWDKGQ-XXXXXXXXRAVPEEDHRSRSRDADYGKRRRIPSE 512
             KER+  YE+++D+GQ         +A  EE+HRSRSRD +YGKRRR PSE
Sbjct: 598  QKERESEYEEEYDRGQSSSRSRSKSQAAREENHRSRSRDTNYGKRRRGPSE 648