BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Forsythia21_contig00014283
         (3171 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011091130.1| PREDICTED: chloroplastic group IIA intron sp...  1162   0.0  
ref|XP_009767563.1| PREDICTED: chloroplastic group IIA intron sp...  1008   0.0  
ref|XP_009614939.1| PREDICTED: chloroplastic group IIA intron sp...  1004   0.0  
ref|XP_009767572.1| PREDICTED: chloroplastic group IIA intron sp...  1004   0.0  
ref|XP_006352117.1| PREDICTED: chloroplastic group IIA intron sp...  1001   0.0  
ref|XP_004247646.1| PREDICTED: chloroplastic group IIA intron sp...   985   0.0  
ref|XP_010278131.1| PREDICTED: chloroplastic group IIA intron sp...   966   0.0  
emb|CDO99162.1| unnamed protein product [Coffea canephora]            966   0.0  
ref|XP_010278134.1| PREDICTED: chloroplastic group IIA intron sp...   964   0.0  
ref|XP_010278136.1| PREDICTED: chloroplastic group IIA intron sp...   963   0.0  
ref|XP_010278130.1| PREDICTED: chloroplastic group IIA intron sp...   963   0.0  
emb|CAN79523.1| hypothetical protein VITISV_010525 [Vitis vinifera]   961   0.0  
ref|XP_007227020.1| hypothetical protein PRUPE_ppa001134mg [Prun...   958   0.0  
ref|XP_002280226.1| PREDICTED: chloroplastic group IIA intron sp...   956   0.0  
ref|XP_008224429.1| PREDICTED: chloroplastic group IIA intron sp...   954   0.0  
ref|XP_006489518.1| PREDICTED: chloroplastic group IIA intron sp...   941   0.0  
ref|XP_007034974.1| CRM family member 3A isoform 1 [Theobroma ca...   941   0.0  
gb|KDO45877.1| hypothetical protein CISIN_1g002316mg [Citrus sin...   938   0.0  
ref|XP_008391092.1| PREDICTED: chloroplastic group IIA intron sp...   932   0.0  
gb|KDO45878.1| hypothetical protein CISIN_1g002316mg [Citrus sin...   931   0.0  

>ref|XP_011091130.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic [Sesamum indicum]
          Length = 886

 Score = 1162 bits (3006), Expect = 0.0
 Identities = 620/887 (69%), Positives = 701/887 (79%), Gaps = 6/887 (0%)
 Frame = -2

Query: 3026 MATMPSCQFYQKNTFWINSFQCSVSKFHVRTTLQFFKYSSSLPSKNQSFRATNDAINSDS 2847
            MA MPS QFY KN+F +++FQ SVSKFHVRTTLQFF+YSSSLP KN+ F   ++  + +S
Sbjct: 1    MAVMPSYQFYPKNSFLMDTFQSSVSKFHVRTTLQFFRYSSSLPVKNRFFCVIDETSSRNS 60

Query: 2846 IPKKNPQKRPHLLPKHRNKRWNSGSETPISQSSDGDR-LSGSSWLDKWSGREKPNGLKRP 2670
            +P++NP KR +LLP+++    +   E PISQSS+    LS SSWL  W    KPNG +RP
Sbjct: 61   VPQENPHKRFNLLPRNKKGGSSFSGEEPISQSSNSRVILSRSSWLANWDVTSKPNGGRRP 120

Query: 2669 PVVLNYRNSGDVXXXXXXXXXXXXXXXXTMERIVEKLKKFGYMDDVSEKNENVGRVIEKG 2490
              V+NYRN GDV                TM+RIVEKLKKFGY+DD S KNEN+G VIEKG
Sbjct: 121  QAVVNYRNRGDVSSSDSEEGTSTSSGGSTMQRIVEKLKKFGYIDDDSNKNENMGGVIEKG 180

Query: 2489 SIEDIFYVEEGLLPDTRGGFSEKSLFRDESS----NGKVRFPWXXXXXXXXXKRSLDRRK 2322
            SIEDIFYVEEGLLP+TRGGFSE+  F DE+     NG+VRFPW          RSLD R+
Sbjct: 181  SIEDIFYVEEGLLPNTRGGFSEEFPFGDENGVARGNGEVRFPWEKDALGEQK-RSLDSRR 239

Query: 2321 VRSLAELTLPESELRRLKNLALRIKNKTKIXXXGVTQQVVETIREKWRTSEVVRLKFEGA 2142
             RSLAELTLPE ELRRL NLALRIKNKT+I   GVTQQVVETIREKW+TSEVVRLK EG 
Sbjct: 240  SRSLAELTLPEPELRRLTNLALRIKNKTRIGGAGVTQQVVETIREKWKTSEVVRLKIEGP 299

Query: 2141 PALNMKRMHEILERKTGGLVIWRSGTSVSLYRGATYEDPTEQLKKRMFGKKEISRKSSST 1962
            PALNM+RMHEILERKTGGLVIWRSGTS++LYRG TYED   +LKKR+F + E+  KS S 
Sbjct: 300  PALNMRRMHEILERKTGGLVIWRSGTSLALYRGVTYEDSATKLKKRIFRRNELPHKSHS- 358

Query: 1961 ASDEAGQNPSGCGPLSDVDAPQAETISTGSESKNSETLLEVKYEDEVEKLLDGLGPRYTD 1782
            A+D+ GQ+ S  G L D + P  E++S   + ++ ET  EV+YEDEV+KLLD LGPRYTD
Sbjct: 359  ATDKTGQDSSESGVLPDREVPSPESVSLNPDDRDPETSSEVRYEDEVDKLLDSLGPRYTD 418

Query: 1781 WXXXXXXXXXXXXXXXXXPGYQPPFRLLPYGVRSTLGTKEATTLRRLARVLPPHFALGRS 1602
            W                 PGY+PPFRLLPYGVRSTLG KEAT LRRLARVLPPHFALGRS
Sbjct: 419  WPGDDPLPVDADLLPGTVPGYRPPFRLLPYGVRSTLGMKEATALRRLARVLPPHFALGRS 478

Query: 1601 RQHQGLAAAMIKLWERSKIAKIALKRGVQLTTSERMAEDIKRLTGGMLLSRNKDFLVYYR 1422
            RQHQGLAAAMIKLWERS IAKIALKRGVQLTTSERMAED+KRLTGGMLLSRNKDFLVYYR
Sbjct: 479  RQHQGLAAAMIKLWERSSIAKIALKRGVQLTTSERMAEDLKRLTGGMLLSRNKDFLVYYR 538

Query: 1421 GKDFLSPDVXXXXXXXXXXXXXLQDEEEQARLRASAFVIPSVEDTGTSGTAGTLKETLDA 1242
            GKDFLSPDV             LQDEEEQARLRA A + P+VE+T  SGTAGTLKETLDA
Sbjct: 539  GKDFLSPDVAEALLEKERLAKALQDEEEQARLRALALIAPAVEETDESGTAGTLKETLDA 598

Query: 1241 DSRWGKRLDDEEKEKMMREAEVSRHANLVRKLQKKLDFADRKLMKAERALSKVEESLNPA 1062
            D+RWGKRLDD  KEK+MREAEV RHANLVRKL+ KL FA+RKL KAERALSKVEESL PA
Sbjct: 599  DTRWGKRLDDVHKEKVMREAEVLRHANLVRKLENKLAFAERKLSKAERALSKVEESLYPA 658

Query: 1061 DHPADPQSITDEERFMFWKLGLRMKAXXXXXXXXXXXGTVENMHLHWKYRELIKIIVKAK 882
            D   DP+S+TDEERFMF KLGLRMKA           GTVENMHLHWKYREL+KIIVKA+
Sbjct: 659  DRAQDPESLTDEERFMFRKLGLRMKAFLLLGRRGVFGGTVENMHLHWKYRELVKIIVKAQ 718

Query: 881  NFEEVKNIALSLEAESGGVLVSVDKVSKGYAIIVFRGRDYRRPSTLRPKNLLTKRKALAR 702
            N EEVKNIAL+LEAESGGVLVSVDKVSKGYAIIVFRGRDY+RPS LRPKNLLTKRKALAR
Sbjct: 719  NIEEVKNIALALEAESGGVLVSVDKVSKGYAIIVFRGRDYKRPSLLRPKNLLTKRKALAR 778

Query: 701  SIELQRREALMNHISTLQTRVNQLIAEIEQMASVKDRGDEELYNKLDSAYLTEDEES-ED 525
            SIELQRREAL+NH+STLQTRVNQL +EIEQMA+VK++GDEELYNKLDSAYLTEDE+S E+
Sbjct: 779  SIELQRREALLNHMSTLQTRVNQLRSEIEQMAAVKEQGDEELYNKLDSAYLTEDEDSEEE 838

Query: 524  GLEDAYLETYDSEDEVVDENDISVHNLQPETNFPYGFEDESETDLGE 384
            G E+AYL TYDS++++VDEN+ SVHN    TNFPY F++ESET+  E
Sbjct: 839  GDEEAYLGTYDSDNDMVDENNDSVHNTYLGTNFPYDFQEESETEFSE 885


>ref|XP_009767563.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic isoform X1 [Nicotiana sylvestris]
          Length = 859

 Score = 1008 bits (2605), Expect = 0.0
 Identities = 549/884 (62%), Positives = 650/884 (73%), Gaps = 5/884 (0%)
 Frame = -2

Query: 3026 MATMPSCQFYQKNTFWINSFQCSVSKFHVRTTLQFFKYSSSLPSKNQSFRAT-NDAINSD 2850
            MA +PS QFY + T                  L FF+Y+S +P K  +F  T N+ +N D
Sbjct: 1    MALVPSHQFYPRTT-----------------RLSFFRYNSIIPFKKPNFHTTHNNIVNQD 43

Query: 2849 SIPKKNPQKRPHLLPKHRNKRWNSGSETPISQSSDGDRLSGSSWLDKWSGREKPNGLKRP 2670
             I K+ PQKR + + K++ K WNS  +  +S +S    +  SSWL KW+       L +P
Sbjct: 44   CIFKQTPQKRSNFVLKNKAKTWNS--KPKVSATS----VFSSSWLGKWNETHNEIKLNKP 97

Query: 2669 PVVLNYRNSGDVXXXXXXXXXXXXXXXXTMERIVEKLKKFGYMDDVSEKNENVGRVIEKG 2490
             +VL+YRN+GD                  M+RIVEKLKKFGY+D+  +K++ V R +EKG
Sbjct: 98   QIVLSYRNNGDTSGSDCEESSSGGSST--MDRIVEKLKKFGYVDEAKQKDKKVIRDVEKG 155

Query: 2489 SIEDIFYVEEGLLPDTRGGFSEKSLFRDES---SNGKVRFPWXXXXXXXXXK-RSLDRRK 2322
            SIEDIF+VEEG+LP+ RGGFSE+S F DE+    +G V+FPW            S+  R 
Sbjct: 156  SIEDIFFVEEGILPNVRGGFSEESPFGDENVFVKDGVVKFPWEKPLVKEEEGGNSMSSRS 215

Query: 2321 VRSLAELTLPESELRRLKNLALRIKNKTKIXXXGVTQQVVETIREKWRTSEVVRLKFEGA 2142
               LAELTLP SELRRL NLALRIKNKT+I   GVTQQVVETIREKW TSEVVRLK EGA
Sbjct: 216  RTHLAELTLPASELRRLTNLALRIKNKTRISGAGVTQQVVETIREKWNTSEVVRLKVEGA 275

Query: 2141 PALNMKRMHEILERKTGGLVIWRSGTSVSLYRGATYEDPTEQLKKRMFGKKEISRKSSST 1962
            PALNMKRMHEILERKTGGLVIWRSGTSV+LYRG +YE P+E++KKR+  + EI RK+S  
Sbjct: 276  PALNMKRMHEILERKTGGLVIWRSGTSVALYRGVSYETPSERMKKRIM-RNEIRRKNSPI 334

Query: 1961 ASDEAGQNPSGCGPLSDVDAPQAETISTGSESKNSETLLEVKYEDEVEKLLDGLGPRYTD 1782
              DE+ QNPS   P + V++ + E+ +T  E+ N     EV YEDEV+KLLDGLGPRYTD
Sbjct: 335  VDDESNQNPSESSPSNYVNSLRPESANTSEENGNIVRQPEVNYEDEVDKLLDGLGPRYTD 394

Query: 1781 WXXXXXXXXXXXXXXXXXPGYQPPFRLLPYGVRSTLGTKEATTLRRLARVLPPHFALGRS 1602
            W                 PGYQPP+RLLPYGVRSTLGTKEAT LRRLAR+LPPHFALGRS
Sbjct: 395  WPGAEPLPVDADLLPGIVPGYQPPYRLLPYGVRSTLGTKEATALRRLARILPPHFALGRS 454

Query: 1601 RQHQGLAAAMIKLWERSKIAKIALKRGVQLTTSERMAEDIKRLTGGMLLSRNKDFLVYYR 1422
            RQHQGLA+AMIKLW+RS IAKIA+KRGVQLTTSERMAEDIK+LTGGMLLSRNKDFLV+YR
Sbjct: 455  RQHQGLASAMIKLWQRSSIAKIAIKRGVQLTTSERMAEDIKKLTGGMLLSRNKDFLVFYR 514

Query: 1421 GKDFLSPDVXXXXXXXXXXXXXLQDEEEQARLRASAFVIPSVEDTGTSGTAGTLKETLDA 1242
            GKDFLSP+V             LQDEEEQARL AS  +   V    +S TAGTL ETLDA
Sbjct: 515  GKDFLSPEVAEALLEKESLAKMLQDEEEQARLGASVSLTAGVATIDSSRTAGTLGETLDA 574

Query: 1241 DSRWGKRLDDEEKEKMMREAEVSRHANLVRKLQKKLDFADRKLMKAERALSKVEESLNPA 1062
            D+RWGKRLDD++KE +MREAE+ RHA+LVRKL+KKL FA+RKLMKAER LSKVEE+LNP 
Sbjct: 575  DARWGKRLDDKDKETVMREAEIVRHADLVRKLEKKLVFAERKLMKAERVLSKVEETLNPL 634

Query: 1061 DHPADPQSITDEERFMFWKLGLRMKAXXXXXXXXXXXGTVENMHLHWKYRELIKIIVKAK 882
            D  A+P S+TDEERFMF KLGLRMKA           GTVENMHLHWKYREL+KI+VKAK
Sbjct: 635  DRRAEPDSLTDEERFMFRKLGLRMKAFLLLGRRGIFDGTVENMHLHWKYRELVKIMVKAK 694

Query: 881  NFEEVKNIALSLEAESGGVLVSVDKVSKGYAIIVFRGRDYRRPSTLRPKNLLTKRKALAR 702
            NFE+V  IAL+LEAESGGVLVSVDKVSKGYAIIVFRG+DY RP TLRPKNLLTKRKALAR
Sbjct: 695  NFEQVSKIALALEAESGGVLVSVDKVSKGYAIIVFRGKDYSRPPTLRPKNLLTKRKALAR 754

Query: 701  SIELQRREALMNHISTLQTRVNQLIAEIEQMASVKDRGDEELYNKLDSAYLTEDEESEDG 522
            SIELQRREAL+ HIST+QTRV QL AEIEQ+ASVKD GD+ELY+KLDSAY TEDE SE+ 
Sbjct: 755  SIELQRREALLKHISTVQTRVQQLTAEIEQLASVKDSGDDELYDKLDSAYSTEDEVSEEE 814

Query: 521  LEDAYLETYDSEDEVVDENDISVHNLQPETNFPYGFEDESETDL 390
             ++AY+E YDS+++VV+ +D S     PET + +  ++ES+ +L
Sbjct: 815  GDEAYIEVYDSDNDVVNSSDDSDDIPHPETEYQHLHQNESQREL 858


>ref|XP_009614939.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic [Nicotiana tomentosiformis]
          Length = 856

 Score = 1004 bits (2596), Expect = 0.0
 Identities = 546/884 (61%), Positives = 646/884 (73%), Gaps = 5/884 (0%)
 Frame = -2

Query: 3026 MATMPSCQFYQKNTFWINSFQCSVSKFHVRTTLQFFKYSSSLPSKNQSFRATNDAI-NSD 2850
            MA +PS QFY + T                  L F +Y+S +P K  +F   +D I N D
Sbjct: 1    MALVPSHQFYPRTT-----------------RLSFLRYNSIIPFKKSNFHTLHDNIVNQD 43

Query: 2849 SIPKKNPQKRPHLLPKHRNKRWNSGSETPISQSSDGDRLSGSSWLDKWSGREKPNGLKRP 2670
             I KK P K  + + K+++K WN      +S  +    L  SSWL KW+       LK+P
Sbjct: 44   CIFKKTPPKISNFVLKNKSKTWN------LSPKASASNLC-SSWLGKWNETHNEIKLKKP 96

Query: 2669 PVVLNYRNSGDVXXXXXXXXXXXXXXXXTMERIVEKLKKFGYMDDVSEKNENVGRVIEKG 2490
             +VL+YRN+GD                  M+RIVEKLKKFGY+D+  +K++ V R +EKG
Sbjct: 97   QIVLSYRNNGDTSGSDYEESSGGGSST--MDRIVEKLKKFGYVDEAKQKDKKVIRDVEKG 154

Query: 2489 SIEDIFYVEEGLLPDTRGGFSEKSLFRDES---SNGKVRFPWXXXXXXXXXK-RSLDRRK 2322
            SIEDIF+VEEG+LP+ RGGFSE+S F DE+    +G V+FPW            S+  R 
Sbjct: 155  SIEDIFFVEEGILPNVRGGFSEESPFGDENVFVKDGVVKFPWEKPLVKEEEGINSMSSRS 214

Query: 2321 VRSLAELTLPESELRRLKNLALRIKNKTKIXXXGVTQQVVETIREKWRTSEVVRLKFEGA 2142
               LAELTLP SELRRL NLALRIKNKT+I   GVTQQVVETIREKW TSEVVRLK EGA
Sbjct: 215  RTHLAELTLPASELRRLTNLALRIKNKTRISGAGVTQQVVETIREKWNTSEVVRLKVEGA 274

Query: 2141 PALNMKRMHEILERKTGGLVIWRSGTSVSLYRGATYEDPTEQLKKRMFGKKEISRKSSST 1962
            PALNMKRMHEILERKTGGLVIWRSG+SV+LYRG +YE P+E++KKR+  + EI  K+S  
Sbjct: 275  PALNMKRMHEILERKTGGLVIWRSGSSVALYRGVSYETPSERMKKRIMRRDEIRHKNSPI 334

Query: 1961 ASDEAGQNPSGCGPLSDVDAPQAETISTGSESKNSETLLEVKYEDEVEKLLDGLGPRYTD 1782
              DE+ QNPS   P SD++  + E+ +T  E+ N     EV YEDEV+KLLDGLGPRYTD
Sbjct: 335  VDDESNQNPSETSPRSDMNPLRPESANTSEENGNIVRQPEVNYEDEVDKLLDGLGPRYTD 394

Query: 1781 WXXXXXXXXXXXXXXXXXPGYQPPFRLLPYGVRSTLGTKEATTLRRLARVLPPHFALGRS 1602
            W                 PGYQPP+RLLPYG+RSTLGTKEAT LRRLAR+LPPHFALGRS
Sbjct: 395  WPGAEPLPLDADLLPGLVPGYQPPYRLLPYGLRSTLGTKEATALRRLARILPPHFALGRS 454

Query: 1601 RQHQGLAAAMIKLWERSKIAKIALKRGVQLTTSERMAEDIKRLTGGMLLSRNKDFLVYYR 1422
            RQHQGLA+AMIKLW+RS IAKIA+KRGVQLTTSERMAEDIK+LTGGMLLSRNKDFLV+YR
Sbjct: 455  RQHQGLASAMIKLWQRSSIAKIAIKRGVQLTTSERMAEDIKKLTGGMLLSRNKDFLVFYR 514

Query: 1421 GKDFLSPDVXXXXXXXXXXXXXLQDEEEQARLRASAFVIPSVEDTGTSGTAGTLKETLDA 1242
            GKDFLSP+V             LQDEEEQARLRAS  +   V  + +S TAGTL ETLDA
Sbjct: 515  GKDFLSPEVAEALLEKERLAKTLQDEEEQARLRASVSLTVGVAISDSSRTAGTLGETLDA 574

Query: 1241 DSRWGKRLDDEEKEKMMREAEVSRHANLVRKLQKKLDFADRKLMKAERALSKVEESLNPA 1062
            D+RWGKRLDD++KE +MREAE+ RHA+LVRKL+KKL FA+RKL+KAER LSKVEE+LNP 
Sbjct: 575  DARWGKRLDDKDKENVMREAEIVRHADLVRKLEKKLAFAERKLVKAERVLSKVEETLNPL 634

Query: 1061 DHPADPQSITDEERFMFWKLGLRMKAXXXXXXXXXXXGTVENMHLHWKYRELIKIIVKAK 882
            D  A+P S+TDEERFMF KLGLRMKA           GTVENMHLHWKYREL+KI+VKAK
Sbjct: 635  DRRAEPDSLTDEERFMFRKLGLRMKAFLLLGRRGIFDGTVENMHLHWKYRELVKIMVKAK 694

Query: 881  NFEEVKNIALSLEAESGGVLVSVDKVSKGYAIIVFRGRDYRRPSTLRPKNLLTKRKALAR 702
            NFE+V  IAL+LEAESGGVLVSVDKVSKGYAIIVFRG+DY RP TLRPKNLLTKRKALAR
Sbjct: 695  NFEQVSKIALALEAESGGVLVSVDKVSKGYAIIVFRGKDYSRPPTLRPKNLLTKRKALAR 754

Query: 701  SIELQRREALMNHISTLQTRVNQLIAEIEQMASVKDRGDEELYNKLDSAYLTEDEESEDG 522
            SIELQRREAL+ HIST+QTRV QL AEIEQ+ASVKD GD+ELY+KLDSAY TEDE+SE+ 
Sbjct: 755  SIELQRREALLKHISTVQTRVQQLTAEIEQLASVKDSGDDELYDKLDSAYSTEDEDSEEE 814

Query: 521  LEDAYLETYDSEDEVVDENDISVHNLQPETNFPYGFEDESETDL 390
             E+ Y+E YDS+ +VV+ +D + H   PET F +  ++ES+ +L
Sbjct: 815  GEETYIEVYDSDIDVVNRSDDTPH---PETEFQHLHQNESQREL 855


>ref|XP_009767572.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic isoform X2 [Nicotiana sylvestris]
          Length = 856

 Score = 1004 bits (2595), Expect = 0.0
 Identities = 549/884 (62%), Positives = 648/884 (73%), Gaps = 5/884 (0%)
 Frame = -2

Query: 3026 MATMPSCQFYQKNTFWINSFQCSVSKFHVRTTLQFFKYSSSLPSKNQSFRAT-NDAINSD 2850
            MA +PS QFY + T                  L FF+Y+S +P K  +F  T N+ +N D
Sbjct: 1    MALVPSHQFYPRTT-----------------RLSFFRYNSIIPFKKPNFHTTHNNIVNQD 43

Query: 2849 SIPKKNPQKRPHLLPKHRNKRWNSGSETPISQSSDGDRLSGSSWLDKWSGREKPNGLKRP 2670
             I K+ PQKR + + K++ K WNS  +  +S +S    +  SSWL KW+       L +P
Sbjct: 44   CIFKQTPQKRSNFVLKNKAKTWNS--KPKVSATS----VFSSSWLGKWNETHNEIKLNKP 97

Query: 2669 PVVLNYRNSGDVXXXXXXXXXXXXXXXXTMERIVEKLKKFGYMDDVSEKNENVGRVIEKG 2490
             +VL+YRN+GD                  M+RIVEKLKKFGY+D+  +K++ V R +EKG
Sbjct: 98   QIVLSYRNNGDTSGSDCEESSSGGSST--MDRIVEKLKKFGYVDEAKQKDKKVIRDVEKG 155

Query: 2489 SIEDIFYVEEGLLPDTRGGFSEKSLFRDES---SNGKVRFPWXXXXXXXXXK-RSLDRRK 2322
            SIEDIF+VEEG+LP+ RGGFSE+S F DE+    +G V+FPW            S+  R 
Sbjct: 156  SIEDIFFVEEGILPNVRGGFSEESPFGDENVFVKDGVVKFPWEKPLVKEEEGGNSMSSRS 215

Query: 2321 VRSLAELTLPESELRRLKNLALRIKNKTKIXXXGVTQQVVETIREKWRTSEVVRLKFEGA 2142
               LAELTLP SELRRL NLALRIKNKT+I   GVTQQVVETIREKW TSEVVRLK EGA
Sbjct: 216  RTHLAELTLPASELRRLTNLALRIKNKTRISGAGVTQQVVETIREKWNTSEVVRLKVEGA 275

Query: 2141 PALNMKRMHEILERKTGGLVIWRSGTSVSLYRGATYEDPTEQLKKRMFGKKEISRKSSST 1962
            PALNMKRMHEILERKTGGLVIWRSGTSV+LYRG +YE P+E++KKR+  + EI RK+S  
Sbjct: 276  PALNMKRMHEILERKTGGLVIWRSGTSVALYRGVSYETPSERMKKRIM-RNEIRRKNSPI 334

Query: 1961 ASDEAGQNPSGCGPLSDVDAPQAETISTGSESKNSETLLEVKYEDEVEKLLDGLGPRYTD 1782
              DE+ QNPS   P + V++ + E+ +T  E+ N     EV YEDEV+KLLDGLGPRYTD
Sbjct: 335  VDDESNQNPSESSPSNYVNSLRPESANTSEENGNIVRQPEVNYEDEVDKLLDGLGPRYTD 394

Query: 1781 WXXXXXXXXXXXXXXXXXPGYQPPFRLLPYGVRSTLGTKEATTLRRLARVLPPHFALGRS 1602
            W                 PGYQPP+RLLPYGVRSTLGTKEAT LRRLAR+LPPHFALGRS
Sbjct: 395  WPGAEPLPVDADLLPGIVPGYQPPYRLLPYGVRSTLGTKEATALRRLARILPPHFALGRS 454

Query: 1601 RQHQGLAAAMIKLWERSKIAKIALKRGVQLTTSERMAEDIKRLTGGMLLSRNKDFLVYYR 1422
            RQHQGLA+AMIKLW+RS IAKIA+KRGVQLTTSERMAEDIK+LTGGMLLSRNKDFLV+YR
Sbjct: 455  RQHQGLASAMIKLWQRSSIAKIAIKRGVQLTTSERMAEDIKKLTGGMLLSRNKDFLVFYR 514

Query: 1421 GKDFLSPDVXXXXXXXXXXXXXLQDEEEQARLRASAFVIPSVEDTGTSGTAGTLKETLDA 1242
            GKDFLSP+V             LQDEEEQARL AS  +   V    +S TAGTL ETLDA
Sbjct: 515  GKDFLSPEVAEALLEKESLAKMLQDEEEQARLGASVSLTAGVATIDSSRTAGTLGETLDA 574

Query: 1241 DSRWGKRLDDEEKEKMMREAEVSRHANLVRKLQKKLDFADRKLMKAERALSKVEESLNPA 1062
            D+RWGKRLDD++KE +MREAE+ RHA+LVRKL+KKL FA+RKLMKAER LSKVEE+LNP 
Sbjct: 575  DARWGKRLDDKDKETVMREAEIVRHADLVRKLEKKLVFAERKLMKAERVLSKVEETLNPL 634

Query: 1061 DHPADPQSITDEERFMFWKLGLRMKAXXXXXXXXXXXGTVENMHLHWKYRELIKIIVKAK 882
            D  A+P S+TDEERFMF KLGLRMKA           GTVENMHLHWKYREL+KI+VKAK
Sbjct: 635  DRRAEPDSLTDEERFMFRKLGLRMKAFLLLGRRGIFDGTVENMHLHWKYRELVKIMVKAK 694

Query: 881  NFEEVKNIALSLEAESGGVLVSVDKVSKGYAIIVFRGRDYRRPSTLRPKNLLTKRKALAR 702
            NFE+V  IAL+LEAESGGVLVSVDKVSKGYAIIVFRG+DY RP TLRPKNLLTKRKALAR
Sbjct: 695  NFEQVSKIALALEAESGGVLVSVDKVSKGYAIIVFRGKDYSRPPTLRPKNLLTKRKALAR 754

Query: 701  SIELQRREALMNHISTLQTRVNQLIAEIEQMASVKDRGDEELYNKLDSAYLTEDEESEDG 522
            SIELQRREAL+ HIST+QTRV QL AEIEQ+ASVKD GD+ELY+KLDSAY TEDEE  D 
Sbjct: 755  SIELQRREALLKHISTVQTRVQQLTAEIEQLASVKDSGDDELYDKLDSAYSTEDEEEGD- 813

Query: 521  LEDAYLETYDSEDEVVDENDISVHNLQPETNFPYGFEDESETDL 390
              +AY+E YDS+++VV+ +D S     PET + +  ++ES+ +L
Sbjct: 814  --EAYIEVYDSDNDVVNSSDDSDDIPHPETEYQHLHQNESQREL 855


>ref|XP_006352117.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like [Solanum tuberosum]
          Length = 883

 Score = 1001 bits (2587), Expect = 0.0
 Identities = 546/908 (60%), Positives = 647/908 (71%), Gaps = 29/908 (3%)
 Frame = -2

Query: 3026 MATMPSCQFYQKNTFWINSFQCSVSKFHVRTTLQFFKYSSSLPSKNQSFRATNDAINSDS 2847
            MA +PS QFY + T                  L F +YSSS P K  +F A +D +N D 
Sbjct: 1    MALVPSHQFYPRTT-----------------RLSFLRYSSSKPFKKPNFHAPHDIVNQDC 43

Query: 2846 IPKKNPQKR------PH------------------LLPKHRNKRWNSGSETPISQSSD-G 2742
            I K+NP KR      PH                   + K+ ++RWN  + +P  +S D G
Sbjct: 44   IFKQNPPKRSNFMITPHDVVNQDCIFRRTPSKRSNFVVKNSSRRWNLDTISPNLKSRDSG 103

Query: 2741 DRLSGSSWLDKWSGREKPNGLKRPPVVLNYRNS-GDVXXXXXXXXXXXXXXXXTMERIVE 2565
              +  SSWL KW+G      LK+  +VLNYRNS GD                  M+RIVE
Sbjct: 104  TSVFSSSWLGKWNGTRNDIKLKKAQIVLNYRNSNGDTSGSDCEESISGST----MDRIVE 159

Query: 2564 KLKKFGYMDDVSEKNENVGRVIEKGSIEDIFYVEEGLLPDTRGGFSEKSLFRDES---SN 2394
            KLKKFGY D+ +EK +   RV+EKGSIEDIF+VEEG+LP+ RGGFSE+S F DE+    +
Sbjct: 160  KLKKFGYADEATEKEKKEKRVVEKGSIEDIFFVEEGILPNVRGGFSEESPFGDENVIAKD 219

Query: 2393 GKVRFPWXXXXXXXXXKRSLDRRKVRSLAELTLPESELRRLKNLALRIKNKTKIXXXGVT 2214
            G VRFPW           S+  R    LAELTLP SELRRL NLALRIKNK++I   GVT
Sbjct: 220  GVVRFPWERPLVKKEESNSMASRSRTHLAELTLPASELRRLTNLALRIKNKSRITGAGVT 279

Query: 2213 QQVVETIREKWRTSEVVRLKFEGAPALNMKRMHEILERKTGGLVIWRSGTSVSLYRGATY 2034
            QQVVETIREKW+TSEVVRLK EGAPALNMKRMHEILERKTGGLVIWRSGTSV+LYRG +Y
Sbjct: 280  QQVVETIREKWKTSEVVRLKVEGAPALNMKRMHEILERKTGGLVIWRSGTSVALYRGVSY 339

Query: 2033 EDPTEQLKKRMFGKKEISRKSSSTASDEAGQNPSGCGPLSDVDAPQAETISTGSESKNSE 1854
            E P+E++KKR+  + EI  K+S     E+ QNP      +DVD+ + +++ T  E+KN +
Sbjct: 340  ETPSERMKKRIMRRDEIRHKNSPIVDGESNQNPR-----NDVDSLREDSVDTSEENKNID 394

Query: 1853 TLLEVKYEDEVEKLLDGLGPRYTDWXXXXXXXXXXXXXXXXXPGYQPPFRLLPYGVRSTL 1674
               EV YEDEV+KLLDGLGPRYTDW                 PGYQPPFR+LPYGVRSTL
Sbjct: 395  RQSEVNYEDEVDKLLDGLGPRYTDWPGSGPLPVDADLLPGIVPGYQPPFRILPYGVRSTL 454

Query: 1673 GTKEATTLRRLARVLPPHFALGRSRQHQGLAAAMIKLWERSKIAKIALKRGVQLTTSERM 1494
              +EAT LRRLARVLPPHFALGRSRQHQGLA+ M+KLW+RS IAKIA+KRGVQLTTSERM
Sbjct: 455  AAREATALRRLARVLPPHFALGRSRQHQGLASVMVKLWQRSSIAKIAIKRGVQLTTSERM 514

Query: 1493 AEDIKRLTGGMLLSRNKDFLVYYRGKDFLSPDVXXXXXXXXXXXXXLQDEEEQARLRASA 1314
            AEDIK+LTGGMLLSRNKDFLV+YRGKDFLSP+V             LQDEEE+ARLRAS 
Sbjct: 515  AEDIKKLTGGMLLSRNKDFLVFYRGKDFLSPEVAEALLEKERLAKTLQDEEEKARLRASL 574

Query: 1313 FVIPSVEDTGTSGTAGTLKETLDADSRWGKRLDDEEKEKMMREAEVSRHANLVRKLQKKL 1134
             +   V    +S TAGTL ETLDAD+RWGKRLDD++KE +MREAE+ RH +LVRKL+KKL
Sbjct: 575  LLTAGVTTINSSRTAGTLGETLDADARWGKRLDDKDKENVMREAELLRHGDLVRKLEKKL 634

Query: 1133 DFADRKLMKAERALSKVEESLNPADHPADPQSITDEERFMFWKLGLRMKAXXXXXXXXXX 954
             FA+RKLMKAER LSKVEE+LNP D  A+P S+TDEERFMF KLGLRMKA          
Sbjct: 635  AFAERKLMKAERVLSKVEETLNPLDRRAEPDSLTDEERFMFRKLGLRMKAFLLLGRRGIF 694

Query: 953  XGTVENMHLHWKYRELIKIIVKAKNFEEVKNIALSLEAESGGVLVSVDKVSKGYAIIVFR 774
             GTVENMHLHWKYREL+KI+VKAKNFE+V  IAL+LEAESGGVLVSVDKVSKGYAIIVFR
Sbjct: 695  DGTVENMHLHWKYRELVKIMVKAKNFEQVSKIALALEAESGGVLVSVDKVSKGYAIIVFR 754

Query: 773  GRDYRRPSTLRPKNLLTKRKALARSIELQRREALMNHISTLQTRVNQLIAEIEQMASVKD 594
            G+DY RP TLRPKNLLTKRKALARSIELQRREAL+ HIS +QTRV QL AEIEQ+AS+KD
Sbjct: 755  GKDYSRPPTLRPKNLLTKRKALARSIELQRREALLEHISAVQTRVGQLTAEIEQLASLKD 814

Query: 593  RGDEELYNKLDSAYLTEDEESEDGLEDAYLETYDSEDEVVDENDISVHNLQPETNFPYGF 414
              D+ELY+KL+SAY +EDE+SE+  +DAY+E +D++++VV+ +D S     PE  F Y  
Sbjct: 815  STDDELYDKLNSAYSSEDEDSEEEGDDAYIEVFDNDNDVVNRSDDSDDTSHPEREFQYVH 874

Query: 413  EDESETDL 390
            ++ESE +L
Sbjct: 875  QNESEREL 882


>ref|XP_004247646.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like [Solanum lycopersicum]
          Length = 883

 Score =  985 bits (2546), Expect = 0.0
 Identities = 539/908 (59%), Positives = 644/908 (70%), Gaps = 29/908 (3%)
 Frame = -2

Query: 3026 MATMPSCQFYQKNTFWINSFQCSVSKFHVRTTLQFFKYSSSLPSKNQSFRATNDAINSDS 2847
            MA +PS QFY + T                  L FF+YSSS P K  +F A +D +N D 
Sbjct: 1    MALVPSHQFYPRTT-----------------RLSFFRYSSSKPFKKPNFHAPHDIVNQDC 43

Query: 2846 IPKKNPQKR------PH------------------LLPKHRNKRWNSGSETPISQSSD-G 2742
            I K+NP KR      PH                   + K+ ++RWN  + +P  +S D G
Sbjct: 44   IFKQNPSKRSNFVVTPHDVVNKDCIFKRTPLKRSNFVVKNSSRRWNLDTISPNLKSRDSG 103

Query: 2741 DRLSGSSWLDKWSGREKPNGLKRPPVVLNYRNS-GDVXXXXXXXXXXXXXXXXTMERIVE 2565
              +  SSWL KW+       LK+  +VLNYRNS GD                  M+RIVE
Sbjct: 104  TSVFSSSWLGKWNETRNDIKLKKAQIVLNYRNSNGDTSGSDCEESISGST----MDRIVE 159

Query: 2564 KLKKFGYMDDVSEKNENVGRVIEKGSIEDIFYVEEGLLPDTRGGFSEKSLFRDES---SN 2394
            KLKKFGY D+ +EK +   RV+EKGSIEDIF+VEEG+LP+ RGGFSE++ F DE+    +
Sbjct: 160  KLKKFGYADEATEKEKREKRVVEKGSIEDIFFVEEGILPNVRGGFSEETPFGDENIIAKD 219

Query: 2393 GKVRFPWXXXXXXXXXKRSLDRRKVRSLAELTLPESELRRLKNLALRIKNKTKIXXXGVT 2214
            G V FPW           S+  R    LAELTLP SELRRL NLALRIKNK++I   GVT
Sbjct: 220  GVVGFPWEKPLVKKEESNSMASRSRTHLAELTLPASELRRLTNLALRIKNKSRITGAGVT 279

Query: 2213 QQVVETIREKWRTSEVVRLKFEGAPALNMKRMHEILERKTGGLVIWRSGTSVSLYRGATY 2034
            QQVVETIREKW+TSEVVRLK EGAPALNMKRMHEILERKTGGLVIWRSGTSV+LYRG +Y
Sbjct: 280  QQVVETIREKWKTSEVVRLKVEGAPALNMKRMHEILERKTGGLVIWRSGTSVALYRGVSY 339

Query: 2033 EDPTEQLKKRMFGKKEISRKSSSTASDEAGQNPSGCGPLSDVDAPQAETISTGSESKNSE 1854
            E P+E++KKR+  + EI +K+S     E+ QN       +DVD+ + +++ T  E+K+ +
Sbjct: 340  ETPSERMKKRIMRRDEIRQKNSPIVDGESNQNSR-----NDVDSLREDSVDTSEENKSID 394

Query: 1853 TLLEVKYEDEVEKLLDGLGPRYTDWXXXXXXXXXXXXXXXXXPGYQPPFRLLPYGVRSTL 1674
               EV YEDEV+KLLDGLGPRYTDW                 PGYQPPFR+LPYGVRSTL
Sbjct: 395  RQSEVNYEDEVDKLLDGLGPRYTDWPGSGPLPVDADLLPGIVPGYQPPFRILPYGVRSTL 454

Query: 1673 GTKEATTLRRLARVLPPHFALGRSRQHQGLAAAMIKLWERSKIAKIALKRGVQLTTSERM 1494
              +EAT LRRLARVLPPHFALGRSRQHQGLA+ M+KLW+RS IAKIA+KRGVQLTTSERM
Sbjct: 455  AAREATALRRLARVLPPHFALGRSRQHQGLASVMVKLWQRSSIAKIAIKRGVQLTTSERM 514

Query: 1493 AEDIKRLTGGMLLSRNKDFLVYYRGKDFLSPDVXXXXXXXXXXXXXLQDEEEQARLRASA 1314
            AEDIK+LTGGMLLSRNKDFLV+YRGKDFLSP+V             LQDEEE+ARLRAS 
Sbjct: 515  AEDIKKLTGGMLLSRNKDFLVFYRGKDFLSPEVAEALLEKERLAKTLQDEEEKARLRASL 574

Query: 1313 FVIPSVEDTGTSGTAGTLKETLDADSRWGKRLDDEEKEKMMREAEVSRHANLVRKLQKKL 1134
             +   V    +S TAGTL ETLDAD+RWGKRLDD+ KE +MREAE+ RH +LVRKL+KKL
Sbjct: 575  NLTAGVTTINSSRTAGTLGETLDADARWGKRLDDKHKENVMREAELLRHGDLVRKLEKKL 634

Query: 1133 DFADRKLMKAERALSKVEESLNPADHPADPQSITDEERFMFWKLGLRMKAXXXXXXXXXX 954
             FA++KLMKAER LSKVEE+LNP D  A+P S+TDEERFMF KLGLRMKA          
Sbjct: 635  AFAEKKLMKAERVLSKVEETLNPLDRHAEPDSLTDEERFMFRKLGLRMKAFLLLGRRGIF 694

Query: 953  XGTVENMHLHWKYRELIKIIVKAKNFEEVKNIALSLEAESGGVLVSVDKVSKGYAIIVFR 774
             GTVENMHLHWKYREL+KI+VKAKNFE+V  IAL+LEAESGG+LVSVDKVSKGYAIIVFR
Sbjct: 695  DGTVENMHLHWKYRELVKIMVKAKNFEQVSKIALALEAESGGILVSVDKVSKGYAIIVFR 754

Query: 773  GRDYRRPSTLRPKNLLTKRKALARSIELQRREALMNHISTLQTRVNQLIAEIEQMASVKD 594
            G+DY RP TLRPKNLLTKRKALARSIELQRREAL+ HIS +QTRV QL AEIEQ+AS+KD
Sbjct: 755  GKDYSRPPTLRPKNLLTKRKALARSIELQRREALLEHISAVQTRVGQLTAEIEQLASLKD 814

Query: 593  RGDEELYNKLDSAYLTEDEESEDGLEDAYLETYDSEDEVVDENDISVHNLQPETNFPYGF 414
              D+ELY+KL+SAY +EDE+SE+  +DA++E +D++++VV  +D S     PE  F Y  
Sbjct: 815  SADDELYDKLNSAYSSEDEDSEEEGDDAFIEVFDNDNDVVHRSDDSDDIPHPEREFQYIH 874

Query: 413  EDESETDL 390
            ++ESE +L
Sbjct: 875  QNESEREL 882


>ref|XP_010278131.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic isoform X2 [Nelumbo nucifera]
            gi|720071686|ref|XP_010278132.1| PREDICTED: chloroplastic
            group IIA intron splicing facilitator CRS1, chloroplastic
            isoform X2 [Nelumbo nucifera]
            gi|720071690|ref|XP_010278133.1| PREDICTED: chloroplastic
            group IIA intron splicing facilitator CRS1, chloroplastic
            isoform X2 [Nelumbo nucifera]
          Length = 914

 Score =  966 bits (2496), Expect = 0.0
 Identities = 529/892 (59%), Positives = 639/892 (71%), Gaps = 9/892 (1%)
 Frame = -2

Query: 3026 MATMPSCQFYQKNTFWINSFQCSVSKFHVRTTLQFFKYSSSLPSKNQSFRATNDAINSDS 2847
            MA +PSCQFY   T +++SFQ S+S+F   + L   +Y+SS+  K  +F  +++ I SDS
Sbjct: 1    MALLPSCQFYP--TSFLDSFQSSLSRFQ-GSRLLILRYASSIRFKRHNFSVSHNNIISDS 57

Query: 2846 IPKKNPQKRPHLLPKHRNKRWNSGSETPISQSSDGDRLSGSSWLDKWSGREKPNGLKRPP 2667
            +P+KN QK      K  N R     ETPISQS      S +SW+ KW+   + N   RP 
Sbjct: 58   LPEKNQQKNSSFALKKNNDRRYFAEETPISQSISNGDFSSNSWISKWNETHQQNLPNRPQ 117

Query: 2666 VVLNYRNSGDVXXXXXXXXXXXXXXXXT--MERIVEKLKKFGYMDDVSEKNENVGRVIEK 2493
             VL+YRN GDV                +  M++IVEKLK+FGY+DD++E+ E   RV EK
Sbjct: 118  TVLDYRNGGDVSSSEDDENNTSSSSGSSSTMDKIVEKLKRFGYVDDMNERRE---RVPEK 174

Query: 2492 GSIEDIFYVEEGLLPDTRGGFSEKSLFRDESS---NGKVRFPWXXXXXXXXXKRSLDRRK 2322
            GS+EDIFYVEEG+LP+TRGGFS +S    E+    +G+VRFPW         +R+  R +
Sbjct: 175  GSVEDIFYVEEGMLPNTRGGFSAESPLGIENGLGGSGEVRFPWEKRSMKEEEERNSFRSR 234

Query: 2321 VR-SLAELTLPESELRRLKNLALRIKNKTKIXXXGVTQQVVETIREKWRTSEVVRLKFEG 2145
             R SLAELTLPESELRRL+NLA+R K KTKI   GVTQ VV+ I EKW+TSE+VRLK EG
Sbjct: 235  SRTSLAELTLPESELRRLRNLAVRTKQKTKIKGAGVTQAVVDAIHEKWKTSEIVRLKCEG 294

Query: 2144 APALNMKRMHEILERKTGGLVIWRSGTSVSLYRGATYEDPT-EQLKKRMFGKKEISRKSS 1968
            A ALNMKRMHEILERKTGGLVIWRSGTS+SLYRG +YE  + +  +KR+    E S  S 
Sbjct: 295  ASALNMKRMHEILERKTGGLVIWRSGTSISLYRGVSYEVASVKDARKRIQNINENSHNSF 354

Query: 1967 STASDEAGQNPSGCGPLSDVDAPQAETISTGSESKNSETLLEVKYEDEVEKLLDGLGPRY 1788
               + +  ++P        V  PQ   ++T  E K+ E+L E+KYE E+++LLD LGPRY
Sbjct: 355  EIITAKINRDPKENSSYGAVQEPQTSMVATVEEKKDVESLPEIKYEHEMDELLDSLGPRY 414

Query: 1787 TDWXXXXXXXXXXXXXXXXXPGYQPPFRLLPYGVRSTLGTKEATTLRRLARVLPPHFALG 1608
            TDW                   Y+PPFR+LPYGVRSTLG KE T LRRLAR++PPHFALG
Sbjct: 415  TDWPGNGPLPVDADLLPGVVLNYKPPFRILPYGVRSTLGIKETTALRRLARIIPPHFALG 474

Query: 1607 RSRQHQGLAAAMIKLWERSKIAKIALKRGVQLTTSERMAEDIKRLTGGMLLSRNKDFLVY 1428
            RSRQHQGLA AMIKLWERS IAKIALKRGVQLTTSERMAEDIK+LTG  +LSRNKDF+V+
Sbjct: 475  RSRQHQGLAMAMIKLWERSSIAKIALKRGVQLTTSERMAEDIKKLTGATILSRNKDFIVF 534

Query: 1427 YRGKDFLSPDVXXXXXXXXXXXXXLQDEEEQARLRASAFVIPSVEDTGTSGTAGTLKETL 1248
            YRGK+FLSPDV             LQDEEEQARLRAS+ VI   E    SGTAGTL+ETL
Sbjct: 535  YRGKNFLSPDVTEALLERERLAKALQDEEEQARLRASSMVISVSETIVESGTAGTLEETL 594

Query: 1247 DADSRWGKRLDDEEKEKMMREAEVSRHANLVRKLQKKLDFADRKLMKAERALSKVEESLN 1068
            +AD+RWGK+LDDE+++KMMR AEV+RH  LVRKL++KL  A+RKLMKAERALSKVEE L 
Sbjct: 595  EADARWGKKLDDEDRKKMMRAAEVARHGTLVRKLEQKLALAERKLMKAERALSKVEEFLK 654

Query: 1067 PADHPADPQSITDEERFMFWKLGLRMKAXXXXXXXXXXXGTVENMHLHWKYRELIKIIVK 888
            P + PADP+SITDEERFMF KLGLRMKA           GTVENMHLHWKYREL+KI+VK
Sbjct: 655  PTERPADPESITDEERFMFRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELVKILVK 714

Query: 887  AKNFEEVKNIALSLEAESGGVLVSVDKVSKGYAIIVFRGRDYRRPSTLRPKNLLTKRKAL 708
            AK F++V+NIAL+LEAESGG+LVSVD+VSKG+AIIVFRG+DY+RP TLRPKNLLTKRKAL
Sbjct: 715  AKTFDQVRNIALALEAESGGILVSVDRVSKGFAIIVFRGKDYKRPPTLRPKNLLTKRKAL 774

Query: 707  ARSIELQRREALMNHISTLQTRVNQLIAEIEQMASVKDRGDEELYNKLDSAYLTEDEESE 528
            ARSIELQR EAL  HISTL  RV  L +E++QM  VKD+GDEELY KLD+AY TEDE+SE
Sbjct: 775  ARSIELQRHEALYKHISTLNKRVEMLRSELDQMEIVKDQGDEELYAKLDAAYPTEDEDSE 834

Query: 527  DGLEDAYLETYDSEDEVVDEND-ISVHNLQPETNFPYGFED-ESETDLGELQ 378
            D  ++AYLETYDS++   D  D I   + + ETNFPY  ++   ETD   LQ
Sbjct: 835  DEGDEAYLETYDSDNNDADPKDAIQNFHAEIETNFPYDEQNWAGETDSEALQ 886


>emb|CDO99162.1| unnamed protein product [Coffea canephora]
          Length = 871

 Score =  966 bits (2496), Expect = 0.0
 Identities = 550/897 (61%), Positives = 642/897 (71%), Gaps = 19/897 (2%)
 Frame = -2

Query: 3026 MATMPSCQFYQKNTFWINSFQCSVSKFHVRTTLQFFKYSSSLPSKNQSFRATNDAINSDS 2847
            MA +P  QFY + T +++SFQ S   F                     F A    +NSDS
Sbjct: 1    MALVPIQQFYPRATTFMDSFQSSKQTF---------------------FIANKSTMNSDS 39

Query: 2846 IPKKNPQKRPHLLPKHRNKRWNSGSETPISQSSDGDRLSGSSWLDKWSGREKPNG-LKRP 2670
            I ++NPQK      + +NK W+   +     ++    LS +SWLDKW+   K +  LKRP
Sbjct: 40   IQRQNPQKSFDFDGRTKNKEWDFARK---GSNASEVSLSRNSWLDKWNETHKQDKKLKRP 96

Query: 2669 PVVLNYRNSGDVXXXXXXXXXXXXXXXXTMERIVEKLKKFGYMDDVSEKNENVG--RVIE 2496
             VVLNYRN+G+V                 MERIVEKLKKFGY+D+V++K   VG  RVIE
Sbjct: 97   QVVLNYRNNGEVSSSDCEENGGGTGTT--MERIVEKLKKFGYVDNVTDK---VGEDRVIE 151

Query: 2495 KGSIEDIFYVEEGLLPDTRGGFSEKSLFRDES---SNGKVRFPWXXXXXXXXXKRSLDRR 2325
            +GSIEDIFY+EEG+LP+TRGGFSEKS F DES   S+G+VRFPW         + S+ ++
Sbjct: 152  RGSIEDIFYIEEGILPNTRGGFSEKSPFGDESVVGSDGEVRFPWEKDEVKDKERYSVRQK 211

Query: 2324 KVRSLAELTLPESELRRLKNLALRIKNKTKIXXXGVTQQVVETIREKWRTSEVVRLKFEG 2145
               S AELTLPESELRRL+N+ALRIKNKT+I   GVTQ+VVE I +KW+ SEVVRLK EG
Sbjct: 212  SKTSFAELTLPESELRRLRNMALRIKNKTRIGGAGVTQEVVEKIHQKWKGSEVVRLKVEG 271

Query: 2144 APALNMKRMHEILERKTGGLVIWRSGTSVSLYRGATYEDPTEQLKKRMFGKKEISRKSSS 1965
            APALNM+RMHEILERKTGGLVIWRSGTSV+LYRG  YE P+E+LKKR++ + EI    S 
Sbjct: 272  APALNMRRMHEILERKTGGLVIWRSGTSVALYRGVGYEAPSERLKKRIYKENEIPHDQSL 331

Query: 1964 TASDEAGQNPSGCGPLSDVDAPQAETIST--GSESKNSETLLEVKYEDEVEKLLDGLGPR 1791
              +     +   C P S+V  P++ T  +    E+++  +  EVKYEDEV+KLL GLGPR
Sbjct: 332  ATTVSNSNDHLECNPCSNVHTPESVTSFSKDAGENRSIGSFPEVKYEDEVDKLLHGLGPR 391

Query: 1790 YTDWXXXXXXXXXXXXXXXXXPGYQPPFRLLPYGVRSTLGTKEATTLRRLARVLPPHFAL 1611
            YTDW                 PGYQ PFRLLPYGVRSTLG KE T LRRLAR LPPHFAL
Sbjct: 392  YTDWPGAGPLPVDADLLPSVIPGYQRPFRLLPYGVRSTLGMKEGTALRRLARSLPPHFAL 451

Query: 1610 GRSRQHQGLAAAMIKLWERSKIAKIALKRGVQLTTSERMAEDIKRLTGGMLLSRNKDFLV 1431
            GRSRQHQGLA AMIKLWERS IAKIALKRGVQLTTSERMAEDIK LTGG+LLSRNKDFLV
Sbjct: 452  GRSRQHQGLAVAMIKLWERSSIAKIALKRGVQLTTSERMAEDIKNLTGGVLLSRNKDFLV 511

Query: 1430 YYRGKDFLSPDVXXXXXXXXXXXXXLQDEEEQARLRASAFVIPSVEDTGTSGTAGTLKET 1251
            +YRGK+FLSPDV             LQDEEE+ARL+ASA V PS   +  SGTAGTL ET
Sbjct: 512  FYRGKNFLSPDVAEALLEKERLAKTLQDEEERARLKASALVTPSRVISDESGTAGTLGET 571

Query: 1250 LDADSRWGKRLDDEEKEKMMREAEVSRHANLVRKLQKKLDFADRKLMKAERALSKVEESL 1071
            LDAD+RWGK+LDD+ K K+MREAE+ RHANLVRKL+KKL FA+RK+ KAERALSKVEE+L
Sbjct: 572  LDADARWGKKLDDDLKAKVMREAEMLRHANLVRKLEKKLGFAERKISKAERALSKVEETL 631

Query: 1070 NPADHPADPQSITDEERFMFWKLGLRMKA--------XXXXXXXXXXXGTVENMHLHWKY 915
             PAD  AD QSITDEERFMF KLGLRMKA                   GTVENMHLHWKY
Sbjct: 632  YPADRAADLQSITDEERFMFRKLGLRMKAFLLLGKKIFQNICRRGVFDGTVENMHLHWKY 691

Query: 914  RELIKIIVKAKNFEEVKNIALSLEAESGGVLVSVDKVSKGYAIIVFRGRDYRRPSTLRPK 735
            REL+KIIVKAKNFEEVK IALSLEAESGG+LVSVDKVSKGYAIIVFRG+DY+RPSTLRPK
Sbjct: 692  RELVKIIVKAKNFEEVKAIALSLEAESGGLLVSVDKVSKGYAIIVFRGKDYKRPSTLRPK 751

Query: 734  NLLTKRKALARSIELQRREALMNHISTLQTRVNQLIAEIEQMASVKDRGDEELYNKLDSA 555
            NLLTKRKALARSIELQRR+AL+ HI+ LQT V Q+ AEIEQMA+VKD+GDEELY++LDSA
Sbjct: 752  NLLTKRKALARSIELQRRQALLKHIARLQTNVEQIRAEIEQMANVKDQGDEELYDRLDSA 811

Query: 554  YLTEDEESEDGLED-AYLETYDSEDEVVDEND--ISVHNLQPETNFPYGFEDESETD 393
            Y TED+E  +  ED AY ETY SE  + D++D   S H+L    NF Y   D SE++
Sbjct: 812  YPTEDDEDSEEEEDGAYPETYGSETGLADKSDDPFSSHHL---GNFVYRTGDVSESE 865


>ref|XP_010278134.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic isoform X3 [Nelumbo nucifera]
          Length = 896

 Score =  964 bits (2492), Expect = 0.0
 Identities = 525/884 (59%), Positives = 636/884 (71%), Gaps = 8/884 (0%)
 Frame = -2

Query: 3026 MATMPSCQFYQKNTFWINSFQCSVSKFHVRTTLQFFKYSSSLPSKNQSFRATNDAINSDS 2847
            MA +PSCQFY   T +++SFQ S+S+F   + L   +Y+SS+  K  +F  +++ I SDS
Sbjct: 1    MALLPSCQFYP--TSFLDSFQSSLSRFQ-GSRLLILRYASSIRFKRHNFSVSHNNIISDS 57

Query: 2846 IPKKNPQKRPHLLPKHRNKRWNSGSETPISQSSDGDRLSGSSWLDKWSGREKPNGLKRPP 2667
            +P+KN QK      K  N R     ETPISQS      S +SW+ KW+   + N   RP 
Sbjct: 58   LPEKNQQKNSSFALKKNNDRRYFAEETPISQSISNGDFSSNSWISKWNETHQQNLPNRPQ 117

Query: 2666 VVLNYRNSGDVXXXXXXXXXXXXXXXXT--MERIVEKLKKFGYMDDVSEKNENVGRVIEK 2493
             VL+YRN GDV                +  M++IVEKLK+FGY+DD++E+ E   RV EK
Sbjct: 118  TVLDYRNGGDVSSSEDDENNTSSSSGSSSTMDKIVEKLKRFGYVDDMNERRE---RVPEK 174

Query: 2492 GSIEDIFYVEEGLLPDTRGGFSEKSLFRDESS---NGKVRFPWXXXXXXXXXKRSLDRRK 2322
            GS+EDIFYVEEG+LP+TRGGFS +S    E+    +G+VRFPW         +R+  R +
Sbjct: 175  GSVEDIFYVEEGMLPNTRGGFSAESPLGIENGLGGSGEVRFPWEKRSMKEEEERNSFRSR 234

Query: 2321 VR-SLAELTLPESELRRLKNLALRIKNKTKIXXXGVTQQVVETIREKWRTSEVVRLKFEG 2145
             R SLAELTLPESELRRL+NLA+R K KTKI   GVTQ VV+ I EKW+TSE+VRLK EG
Sbjct: 235  SRTSLAELTLPESELRRLRNLAVRTKQKTKIKGAGVTQAVVDAIHEKWKTSEIVRLKCEG 294

Query: 2144 APALNMKRMHEILERKTGGLVIWRSGTSVSLYRGATYEDPT-EQLKKRMFGKKEISRKSS 1968
            A ALNMKRMHEILERKTGGLVIWRSGTS+SLYRG +YE  + +  +KR+    E S  S 
Sbjct: 295  ASALNMKRMHEILERKTGGLVIWRSGTSISLYRGVSYEVASVKDARKRIQNINENSHNSF 354

Query: 1967 STASDEAGQNPSGCGPLSDVDAPQAETISTGSESKNSETLLEVKYEDEVEKLLDGLGPRY 1788
               + +  ++P        V  PQ   ++T  E K+ E+L E+KYE E+++LLD LGPRY
Sbjct: 355  EIITAKINRDPKENSSYGAVQEPQTSMVATVEEKKDVESLPEIKYEHEMDELLDSLGPRY 414

Query: 1787 TDWXXXXXXXXXXXXXXXXXPGYQPPFRLLPYGVRSTLGTKEATTLRRLARVLPPHFALG 1608
            TDW                   Y+PPFR+LPYGVRSTLG KE T LRRLAR++PPHFALG
Sbjct: 415  TDWPGNGPLPVDADLLPGVVLNYKPPFRILPYGVRSTLGIKETTALRRLARIIPPHFALG 474

Query: 1607 RSRQHQGLAAAMIKLWERSKIAKIALKRGVQLTTSERMAEDIKRLTGGMLLSRNKDFLVY 1428
            RSRQHQGLA AMIKLWERS IAKIALKRGVQLTTSERMAEDIK+LTG  +LSRNKDF+V+
Sbjct: 475  RSRQHQGLAMAMIKLWERSSIAKIALKRGVQLTTSERMAEDIKKLTGATILSRNKDFIVF 534

Query: 1427 YRGKDFLSPDVXXXXXXXXXXXXXLQDEEEQARLRASAFVIPSVEDTGTSGTAGTLKETL 1248
            YRGK+FLSPDV             LQDEEEQARLRAS+ VI   E    SGTAGTL+ETL
Sbjct: 535  YRGKNFLSPDVTEALLERERLAKALQDEEEQARLRASSMVISVSETIVESGTAGTLEETL 594

Query: 1247 DADSRWGKRLDDEEKEKMMREAEVSRHANLVRKLQKKLDFADRKLMKAERALSKVEESLN 1068
            +AD+RWGK+LDDE+++KMMR AEV+RH  LVRKL++KL  A+RKLMKAERALSKVEE L 
Sbjct: 595  EADARWGKKLDDEDRKKMMRAAEVARHGTLVRKLEQKLALAERKLMKAERALSKVEEFLK 654

Query: 1067 PADHPADPQSITDEERFMFWKLGLRMKAXXXXXXXXXXXGTVENMHLHWKYRELIKIIVK 888
            P + PADP+SITDEERFMF KLGLRMKA           GTVENMHLHWKYREL+KI+VK
Sbjct: 655  PTERPADPESITDEERFMFRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELVKILVK 714

Query: 887  AKNFEEVKNIALSLEAESGGVLVSVDKVSKGYAIIVFRGRDYRRPSTLRPKNLLTKRKAL 708
            AK F++V+NIAL+LEAESGG+LVSVD+VSKG+AIIVFRG+DY+RP TLRPKNLLTKRKAL
Sbjct: 715  AKTFDQVRNIALALEAESGGILVSVDRVSKGFAIIVFRGKDYKRPPTLRPKNLLTKRKAL 774

Query: 707  ARSIELQRREALMNHISTLQTRVNQLIAEIEQMASVKDRGDEELYNKLDSAYLTEDEESE 528
            ARSIELQR EAL  HISTL  RV  L +E++QM  VKD+GDEELY KLD+AY TEDE+SE
Sbjct: 775  ARSIELQRHEALYKHISTLNKRVEMLRSELDQMEIVKDQGDEELYAKLDAAYPTEDEDSE 834

Query: 527  DGLEDAYLETYDSEDEVVDEND-ISVHNLQPETNFPYGFEDESE 399
            D  ++AYLETYDS++   D  D I   + + ETNFPY  ++ +E
Sbjct: 835  DEGDEAYLETYDSDNNDADPKDAIQNFHAEIETNFPYDEQNWAE 878


>ref|XP_010278136.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic isoform X4 [Nelumbo nucifera]
          Length = 880

 Score =  963 bits (2490), Expect = 0.0
 Identities = 524/877 (59%), Positives = 632/877 (72%), Gaps = 8/877 (0%)
 Frame = -2

Query: 3026 MATMPSCQFYQKNTFWINSFQCSVSKFHVRTTLQFFKYSSSLPSKNQSFRATNDAINSDS 2847
            MA +PSCQFY   T +++SFQ S+S+F   + L   +Y+SS+  K  +F  +++ I SDS
Sbjct: 1    MALLPSCQFYP--TSFLDSFQSSLSRFQ-GSRLLILRYASSIRFKRHNFSVSHNNIISDS 57

Query: 2846 IPKKNPQKRPHLLPKHRNKRWNSGSETPISQSSDGDRLSGSSWLDKWSGREKPNGLKRPP 2667
            +P+KN QK      K  N R     ETPISQS      S +SW+ KW+   + N   RP 
Sbjct: 58   LPEKNQQKNSSFALKKNNDRRYFAEETPISQSISNGDFSSNSWISKWNETHQQNLPNRPQ 117

Query: 2666 VVLNYRNSGDVXXXXXXXXXXXXXXXXT--MERIVEKLKKFGYMDDVSEKNENVGRVIEK 2493
             VL+YRN GDV                +  M++IVEKLK+FGY+DD++E+ E   RV EK
Sbjct: 118  TVLDYRNGGDVSSSEDDENNTSSSSGSSSTMDKIVEKLKRFGYVDDMNERRE---RVPEK 174

Query: 2492 GSIEDIFYVEEGLLPDTRGGFSEKSLFRDESS---NGKVRFPWXXXXXXXXXKRSLDRRK 2322
            GS+EDIFYVEEG+LP+TRGGFS +S    E+    +G+VRFPW         +R+  R +
Sbjct: 175  GSVEDIFYVEEGMLPNTRGGFSAESPLGIENGLGGSGEVRFPWEKRSMKEEEERNSFRSR 234

Query: 2321 VR-SLAELTLPESELRRLKNLALRIKNKTKIXXXGVTQQVVETIREKWRTSEVVRLKFEG 2145
             R SLAELTLPESELRRL+NLA+R K KTKI   GVTQ VV+ I EKW+TSE+VRLK EG
Sbjct: 235  SRTSLAELTLPESELRRLRNLAVRTKQKTKIKGAGVTQAVVDAIHEKWKTSEIVRLKCEG 294

Query: 2144 APALNMKRMHEILERKTGGLVIWRSGTSVSLYRGATYEDPT-EQLKKRMFGKKEISRKSS 1968
            A ALNMKRMHEILERKTGGLVIWRSGTS+SLYRG +YE  + +  +KR+    E S  S 
Sbjct: 295  ASALNMKRMHEILERKTGGLVIWRSGTSISLYRGVSYEVASVKDARKRIQNINENSHNSF 354

Query: 1967 STASDEAGQNPSGCGPLSDVDAPQAETISTGSESKNSETLLEVKYEDEVEKLLDGLGPRY 1788
               + +  ++P        V  PQ   ++T  E K+ E+L E+KYE E+++LLD LGPRY
Sbjct: 355  EIITAKINRDPKENSSYGAVQEPQTSMVATVEEKKDVESLPEIKYEHEMDELLDSLGPRY 414

Query: 1787 TDWXXXXXXXXXXXXXXXXXPGYQPPFRLLPYGVRSTLGTKEATTLRRLARVLPPHFALG 1608
            TDW                   Y+PPFR+LPYGVRSTLG KE T LRRLAR++PPHFALG
Sbjct: 415  TDWPGNGPLPVDADLLPGVVLNYKPPFRILPYGVRSTLGIKETTALRRLARIIPPHFALG 474

Query: 1607 RSRQHQGLAAAMIKLWERSKIAKIALKRGVQLTTSERMAEDIKRLTGGMLLSRNKDFLVY 1428
            RSRQHQGLA AMIKLWERS IAKIALKRGVQLTTSERMAEDIK+LTG  +LSRNKDF+V+
Sbjct: 475  RSRQHQGLAMAMIKLWERSSIAKIALKRGVQLTTSERMAEDIKKLTGATILSRNKDFIVF 534

Query: 1427 YRGKDFLSPDVXXXXXXXXXXXXXLQDEEEQARLRASAFVIPSVEDTGTSGTAGTLKETL 1248
            YRGK+FLSPDV             LQDEEEQARLRAS+ VI   E    SGTAGTL+ETL
Sbjct: 535  YRGKNFLSPDVTEALLERERLAKALQDEEEQARLRASSMVISVSETIVESGTAGTLEETL 594

Query: 1247 DADSRWGKRLDDEEKEKMMREAEVSRHANLVRKLQKKLDFADRKLMKAERALSKVEESLN 1068
            +AD+RWGK+LDDE+++KMMR AEV+RH  LVRKL++KL  A+RKLMKAERALSKVEE L 
Sbjct: 595  EADARWGKKLDDEDRKKMMRAAEVARHGTLVRKLEQKLALAERKLMKAERALSKVEEFLK 654

Query: 1067 PADHPADPQSITDEERFMFWKLGLRMKAXXXXXXXXXXXGTVENMHLHWKYRELIKIIVK 888
            P + PADP+SITDEERFMF KLGLRMKA           GTVENMHLHWKYREL+KI+VK
Sbjct: 655  PTERPADPESITDEERFMFRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELVKILVK 714

Query: 887  AKNFEEVKNIALSLEAESGGVLVSVDKVSKGYAIIVFRGRDYRRPSTLRPKNLLTKRKAL 708
            AK F++V+NIAL+LEAESGG+LVSVD+VSKG+AIIVFRG+DY+RP TLRPKNLLTKRKAL
Sbjct: 715  AKTFDQVRNIALALEAESGGILVSVDRVSKGFAIIVFRGKDYKRPPTLRPKNLLTKRKAL 774

Query: 707  ARSIELQRREALMNHISTLQTRVNQLIAEIEQMASVKDRGDEELYNKLDSAYLTEDEESE 528
            ARSIELQR EAL  HISTL  RV  L +E++QM  VKD+GDEELY KLD+AY TEDE+SE
Sbjct: 775  ARSIELQRHEALYKHISTLNKRVEMLRSELDQMEIVKDQGDEELYAKLDAAYPTEDEDSE 834

Query: 527  DGLEDAYLETYDSEDEVVDEND-ISVHNLQPETNFPY 420
            D  ++AYLETYDS++   D  D I   + + ETNFPY
Sbjct: 835  DEGDEAYLETYDSDNNDADPKDAIQNFHAEIETNFPY 871


>ref|XP_010278130.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic isoform X1 [Nelumbo nucifera]
          Length = 919

 Score =  963 bits (2490), Expect = 0.0
 Identities = 524/877 (59%), Positives = 632/877 (72%), Gaps = 8/877 (0%)
 Frame = -2

Query: 3026 MATMPSCQFYQKNTFWINSFQCSVSKFHVRTTLQFFKYSSSLPSKNQSFRATNDAINSDS 2847
            MA +PSCQFY   T +++SFQ S+S+F   + L   +Y+SS+  K  +F  +++ I SDS
Sbjct: 1    MALLPSCQFYP--TSFLDSFQSSLSRFQ-GSRLLILRYASSIRFKRHNFSVSHNNIISDS 57

Query: 2846 IPKKNPQKRPHLLPKHRNKRWNSGSETPISQSSDGDRLSGSSWLDKWSGREKPNGLKRPP 2667
            +P+KN QK      K  N R     ETPISQS      S +SW+ KW+   + N   RP 
Sbjct: 58   LPEKNQQKNSSFALKKNNDRRYFAEETPISQSISNGDFSSNSWISKWNETHQQNLPNRPQ 117

Query: 2666 VVLNYRNSGDVXXXXXXXXXXXXXXXXT--MERIVEKLKKFGYMDDVSEKNENVGRVIEK 2493
             VL+YRN GDV                +  M++IVEKLK+FGY+DD++E+ E   RV EK
Sbjct: 118  TVLDYRNGGDVSSSEDDENNTSSSSGSSSTMDKIVEKLKRFGYVDDMNERRE---RVPEK 174

Query: 2492 GSIEDIFYVEEGLLPDTRGGFSEKSLFRDESS---NGKVRFPWXXXXXXXXXKRSLDRRK 2322
            GS+EDIFYVEEG+LP+TRGGFS +S    E+    +G+VRFPW         +R+  R +
Sbjct: 175  GSVEDIFYVEEGMLPNTRGGFSAESPLGIENGLGGSGEVRFPWEKRSMKEEEERNSFRSR 234

Query: 2321 VR-SLAELTLPESELRRLKNLALRIKNKTKIXXXGVTQQVVETIREKWRTSEVVRLKFEG 2145
             R SLAELTLPESELRRL+NLA+R K KTKI   GVTQ VV+ I EKW+TSE+VRLK EG
Sbjct: 235  SRTSLAELTLPESELRRLRNLAVRTKQKTKIKGAGVTQAVVDAIHEKWKTSEIVRLKCEG 294

Query: 2144 APALNMKRMHEILERKTGGLVIWRSGTSVSLYRGATYEDPT-EQLKKRMFGKKEISRKSS 1968
            A ALNMKRMHEILERKTGGLVIWRSGTS+SLYRG +YE  + +  +KR+    E S  S 
Sbjct: 295  ASALNMKRMHEILERKTGGLVIWRSGTSISLYRGVSYEVASVKDARKRIQNINENSHNSF 354

Query: 1967 STASDEAGQNPSGCGPLSDVDAPQAETISTGSESKNSETLLEVKYEDEVEKLLDGLGPRY 1788
               + +  ++P        V  PQ   ++T  E K+ E+L E+KYE E+++LLD LGPRY
Sbjct: 355  EIITAKINRDPKENSSYGAVQEPQTSMVATVEEKKDVESLPEIKYEHEMDELLDSLGPRY 414

Query: 1787 TDWXXXXXXXXXXXXXXXXXPGYQPPFRLLPYGVRSTLGTKEATTLRRLARVLPPHFALG 1608
            TDW                   Y+PPFR+LPYGVRSTLG KE T LRRLAR++PPHFALG
Sbjct: 415  TDWPGNGPLPVDADLLPGVVLNYKPPFRILPYGVRSTLGIKETTALRRLARIIPPHFALG 474

Query: 1607 RSRQHQGLAAAMIKLWERSKIAKIALKRGVQLTTSERMAEDIKRLTGGMLLSRNKDFLVY 1428
            RSRQHQGLA AMIKLWERS IAKIALKRGVQLTTSERMAEDIK+LTG  +LSRNKDF+V+
Sbjct: 475  RSRQHQGLAMAMIKLWERSSIAKIALKRGVQLTTSERMAEDIKKLTGATILSRNKDFIVF 534

Query: 1427 YRGKDFLSPDVXXXXXXXXXXXXXLQDEEEQARLRASAFVIPSVEDTGTSGTAGTLKETL 1248
            YRGK+FLSPDV             LQDEEEQARLRAS+ VI   E    SGTAGTL+ETL
Sbjct: 535  YRGKNFLSPDVTEALLERERLAKALQDEEEQARLRASSMVISVSETIVESGTAGTLEETL 594

Query: 1247 DADSRWGKRLDDEEKEKMMREAEVSRHANLVRKLQKKLDFADRKLMKAERALSKVEESLN 1068
            +AD+RWGK+LDDE+++KMMR AEV+RH  LVRKL++KL  A+RKLMKAERALSKVEE L 
Sbjct: 595  EADARWGKKLDDEDRKKMMRAAEVARHGTLVRKLEQKLALAERKLMKAERALSKVEEFLK 654

Query: 1067 PADHPADPQSITDEERFMFWKLGLRMKAXXXXXXXXXXXGTVENMHLHWKYRELIKIIVK 888
            P + PADP+SITDEERFMF KLGLRMKA           GTVENMHLHWKYREL+KI+VK
Sbjct: 655  PTERPADPESITDEERFMFRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELVKILVK 714

Query: 887  AKNFEEVKNIALSLEAESGGVLVSVDKVSKGYAIIVFRGRDYRRPSTLRPKNLLTKRKAL 708
            AK F++V+NIAL+LEAESGG+LVSVD+VSKG+AIIVFRG+DY+RP TLRPKNLLTKRKAL
Sbjct: 715  AKTFDQVRNIALALEAESGGILVSVDRVSKGFAIIVFRGKDYKRPPTLRPKNLLTKRKAL 774

Query: 707  ARSIELQRREALMNHISTLQTRVNQLIAEIEQMASVKDRGDEELYNKLDSAYLTEDEESE 528
            ARSIELQR EAL  HISTL  RV  L +E++QM  VKD+GDEELY KLD+AY TEDE+SE
Sbjct: 775  ARSIELQRHEALYKHISTLNKRVEMLRSELDQMEIVKDQGDEELYAKLDAAYPTEDEDSE 834

Query: 527  DGLEDAYLETYDSEDEVVDEND-ISVHNLQPETNFPY 420
            D  ++AYLETYDS++   D  D I   + + ETNFPY
Sbjct: 835  DEGDEAYLETYDSDNNDADPKDAIQNFHAEIETNFPY 871


>emb|CAN79523.1| hypothetical protein VITISV_010525 [Vitis vinifera]
          Length = 902

 Score =  961 bits (2484), Expect = 0.0
 Identities = 537/887 (60%), Positives = 634/887 (71%), Gaps = 13/887 (1%)
 Frame = -2

Query: 3026 MATMPSCQFYQKNTFWINSFQCSVSKFHVRTTLQFFKYSSSLPSKNQSFRATNDAINSDS 2847
            MA +PS QFY   T +++SF          T LQFF+Y SS   +  S   T + I S+S
Sbjct: 1    MALLPSRQFYPTTTSFLDSFHS--------TRLQFFRYGSSNRFRTHSSYVTRNTIASNS 52

Query: 2846 IPKKNPQKRPHLLPKHRNKRWNSGSETPISQ-SSDGDRLSGSSWLDKWSGREKPNGLKRP 2670
                NPQ++ +++           + TP+SQ  S G   SG +W+DKW+G  + +  K  
Sbjct: 53   T---NPQRKSNIV----------FTNTPVSQYDSGGVSSSGGNWIDKWNGPHQKSHPKEX 99

Query: 2669 PVVLNYRNSGDVXXXXXXXXXXXXXXXXTMERIVEKLKKFGYMDDVSEKNENVG-RVIEK 2493
              V+NYRNS  V                 ME+IVEKLKKFGYMDDV E  ENV  R+IEK
Sbjct: 100  RPVMNYRNSETVSRSDGGSGGGST-----MEKIVEKLKKFGYMDDVKETKENVQERIIEK 154

Query: 2492 GSIEDIFYVEEGLLPDTRGGFSEKSLFRDESS---NGKVRFPWXXXXXXXXXKRSLDRRK 2322
            GSIEDIFY+EEG+LP+ +GGFS  S    E+    NG+VRFPW          R   R  
Sbjct: 155  GSIEDIFYIEEGILPNPQGGFSLDSPLGVENKGDGNGEVRFPWERPKVEEGSVRIKSRT- 213

Query: 2321 VRSLAELTLPESELRRLKNLALRIKNKTKIXXXGVTQQVVETIREKWRTSEVVRLKFEGA 2142
              SLAELTLPESELRRL+NL +R KNKTKI   GVTQ VV+ IREKW+TSE+V+LK EGA
Sbjct: 214  --SLAELTLPESELRRLRNLTMRTKNKTKIGGGGVTQAVVDMIREKWKTSEIVKLKCEGA 271

Query: 2141 PALNMKRMHEILERKTGGLVIWRSGTSVSLYRGATYEDPTEQLKKRMFGKKEISRKSSST 1962
             ALNM+R+HEILERKTGGLVIWRSGTSVSLYRG +YE P  QL KR++ K E S  S S+
Sbjct: 272  AALNMRRIHEILERKTGGLVIWRSGTSVSLYRGVSYEVPV-QLNKRVYKKNETSHSSFSS 330

Query: 1961 --------ASDEAGQNPSGCGPLSDVDAPQAETISTGSESKNSETLLEVKYEDEVEKLLD 1806
                    +S++   N    G   +V A QA    T  E+K++E+  EVKYEDE++KLLD
Sbjct: 331  ITPNSFAISSNKTSGNAPAVGSNQNVHASQATLXITDGENKDTES--EVKYEDEIDKLLD 388

Query: 1805 GLGPRYTDWXXXXXXXXXXXXXXXXXPGYQPPFRLLPYGVRSTLGTKEATTLRRLARVLP 1626
            GLGPRYTDW                  GYQPPFR+LPYGVRS+LG KEAT LRRLARVLP
Sbjct: 389  GLGPRYTDWPXCDPLPIDADLLPGKIHGYQPPFRILPYGVRSSLGLKEATALRRLARVLP 448

Query: 1625 PHFALGRSRQHQGLAAAMIKLWERSKIAKIALKRGVQLTTSERMAEDIKRLTGGMLLSRN 1446
            PHFALGRSRQ +GLA AMIKLWERS IAK+ALKRGVQLTTSERMAEDIK+LTGG+LLSRN
Sbjct: 449  PHFALGRSRQLEGLAMAMIKLWERSSIAKVALKRGVQLTTSERMAEDIKKLTGGVLLSRN 508

Query: 1445 KDFLVYYRGKDFLSPDVXXXXXXXXXXXXXLQDEEEQARLRASAFVIPSVEDTGTSGTAG 1266
            KDFLV+YRGK+FLS DV             LQDEEEQARLRAS  + P+V  T   G+AG
Sbjct: 509  KDFLVFYRGKNFLSSDVTEALLERERLAKALQDEEEQARLRASTLITPTVGITEQVGSAG 568

Query: 1265 TLKETLDADSRWGKRLDDEEKEKMMREAEVSRHANLVRKLQKKLDFADRKLMKAERALSK 1086
            TL ETL+AD+RWGKRLDD +K+KM+++AEV+RHANLVRKL+++L  A+RKLMKAE ALSK
Sbjct: 569  TLGETLEADARWGKRLDDHDKQKMLKKAEVARHANLVRKLERRLALAERKLMKAENALSK 628

Query: 1085 VEESLNPADHPADPQSITDEERFMFWKLGLRMKAXXXXXXXXXXXGTVENMHLHWKYREL 906
            VEE L PA+ PADP+SITDEERFMF KLGLRMKA           GTVENMHLHWKYREL
Sbjct: 629  VEEFLKPANRPADPESITDEERFMFRKLGLRMKAFLLLGRRGVFSGTVENMHLHWKYREL 688

Query: 905  IKIIVKAKNFEEVKNIALSLEAESGGVLVSVDKVSKGYAIIVFRGRDYRRPSTLRPKNLL 726
            +KIIVKAK F++VK  AL+LE+ESGGVLVSVDKVSKG+AI+VFRG+DY+RPSTLRPKNLL
Sbjct: 689  VKIIVKAKTFDQVKKTALALESESGGVLVSVDKVSKGFAIVVFRGKDYQRPSTLRPKNLL 748

Query: 725  TKRKALARSIELQRREALMNHISTLQTRVNQLIAEIEQMASVKDRGDEELYNKLDSAYLT 546
            TKRKALARSIELQRREAL NHIS LQ  V +L +EIEQM  VKD GDEELY+KLDSAY T
Sbjct: 749  TKRKALARSIELQRREALYNHISALQRNVEKLRSEIEQMDIVKDHGDEELYDKLDSAYAT 808

Query: 545  EDEESEDGLEDAYLETYDSEDEVVDENDISVHNLQPETNFPYGFEDE 405
            EDE +E+  ++AYLETY  E++   E+D S+HN   ETNFPY  +DE
Sbjct: 809  EDEHTEEEGDEAYLETYADENDGEHESDNSIHNHHIETNFPYDIQDE 855


>ref|XP_007227020.1| hypothetical protein PRUPE_ppa001134mg [Prunus persica]
            gi|462423956|gb|EMJ28219.1| hypothetical protein
            PRUPE_ppa001134mg [Prunus persica]
          Length = 899

 Score =  958 bits (2477), Expect = 0.0
 Identities = 535/889 (60%), Positives = 643/889 (72%), Gaps = 10/889 (1%)
 Frame = -2

Query: 3026 MATMPSCQFYQKNTFWINSFQCSVSKFHVRTTLQFFKYSSSLPSKNQSFRATNDAINSDS 2847
            M  +PS Q Y  + F  +SFQ S SKFH    +  F+  SS+P K  +F AT+  I+S  
Sbjct: 1    MTLVPSRQLYPTSLF--DSFQSSFSKFH-GPHIHLFRCGSSIPFKKHTFYATHYTISSTL 57

Query: 2846 IPKKNPQKRPHLLPKHRNKRWNSGSETPISQSSDGDRLSGSSWLDKWSGREKPNGLKRPP 2667
             P++NP ++ + + K++          PISQ       S SSW+DKW+   K N  K P 
Sbjct: 58   NPEQNPLRKSNFVRKNQ----------PISQYKPKKNFSSSSWIDKWNESHKHNRPKPPR 107

Query: 2666 VVLNYRNS-----GDVXXXXXXXXXXXXXXXXTMERIVEKLKKFGYMDDVSE-KNENVGR 2505
             VL+Y++S                        TME+IVEKLKKFGY+DD +E K E    
Sbjct: 108  AVLDYQSSESGNLSGSGYAEGDGGGGRNSSGSTMEKIVEKLKKFGYVDDSNENKGEVRDS 167

Query: 2504 VIEKGSIEDIFYVEEGLLPDTRGGFSEKSLFRDES---SNGKVRFPWXXXXXXXXXKRSL 2334
            VIEKGS+EDIFY+EEG+LP++RGGFSE+S    E+    +GKVRFPW         +   
Sbjct: 168  VIEKGSVEDIFYIEEGMLPNSRGGFSEESPLGIENVFGGDGKVRFPWEKPKEEEKQEEGS 227

Query: 2333 DRRKVR-SLAELTLPESELRRLKNLALRIKNKTKIXXXGVTQQVVETIREKWRTSEVVRL 2157
             RRK R SLAELTLPESELRRL NL  + K+KT+I   GVTQ VVE I E+W+TSE+VRL
Sbjct: 228  VRRKSRTSLAELTLPESELRRLTNLTFQKKHKTRIGGGGVTQAVVEMIHERWKTSEIVRL 287

Query: 2156 KFEGAPALNMKRMHEILERKTGGLVIWRSGTSVSLYRGATYEDPTEQLKKRMFGKKEISR 1977
            K EG PALNMKRMHEILERKTGGLVIWRSGTS+SLYRG +YE P+ +L KR++ K +IS 
Sbjct: 288  KIEGPPALNMKRMHEILERKTGGLVIWRSGTSLSLYRGVSYEVPSVKLNKRIYKKNDISS 347

Query: 1976 KSSSTASDEAGQNPSGCGPLSDVDAPQAETISTGSESKNSETLLEVKYEDEVEKLLDGLG 1797
                T +D++  + +     S+V  PQ ++ +T  E +++E L EVKYEDEV+KLLD LG
Sbjct: 348  APLPTVADKSVGDFAELASYSNVKTPQEKSENTSQEKEDTEQLAEVKYEDEVDKLLDSLG 407

Query: 1796 PRYTDWXXXXXXXXXXXXXXXXXPGYQPPFRLLPYGVRSTLGTKEATTLRRLARVLPPHF 1617
            PR+ DW                 PGYQPPFR+LPYGVRSTLG KEAT+LRRLARVLPPHF
Sbjct: 408  PRFKDWPGCDPLPVDADMLPGIVPGYQPPFRVLPYGVRSTLGLKEATSLRRLARVLPPHF 467

Query: 1616 ALGRSRQHQGLAAAMIKLWERSKIAKIALKRGVQLTTSERMAEDIKRLTGGMLLSRNKDF 1437
            ALGRSRQ QGLA AM KLWE+S IAKIALKRGVQLTTSERMAEDIKRLTGG++LSRNKDF
Sbjct: 468  ALGRSRQLQGLAVAMAKLWEKSLIAKIALKRGVQLTTSERMAEDIKRLTGGVMLSRNKDF 527

Query: 1436 LVYYRGKDFLSPDVXXXXXXXXXXXXXLQDEEEQARLRASAFVIPSVEDTGTSGTAGTLK 1257
            LV+YRGK+FLSPDV             LQDEEEQARLRASA  IP+VE     GTAGTL 
Sbjct: 528  LVFYRGKNFLSPDVTEALLERERLAKSLQDEEEQARLRASAMFIPNVEVAQHFGTAGTLG 587

Query: 1256 ETLDADSRWGKRLDDEEKEKMMREAEVSRHANLVRKLQKKLDFADRKLMKAERALSKVEE 1077
            ETLDAD++WGKRLD   KEK+MREA++ RHA+LVRKL++KL FA+RKLM+AE+ALSKVEE
Sbjct: 588  ETLDADAKWGKRLD---KEKVMREADILRHAHLVRKLERKLSFAERKLMRAEQALSKVEE 644

Query: 1076 SLNPADHPADPQSITDEERFMFWKLGLRMKAXXXXXXXXXXXGTVENMHLHWKYRELIKI 897
            SL P+   ADP+SITDEERFMF KLGLRMKA           GTVENMHLHWKYREL+KI
Sbjct: 645  SLKPSKQQADPESITDEERFMFRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELVKI 704

Query: 896  IVKAKNFEEVKNIALSLEAESGGVLVSVDKVSKGYAIIVFRGRDYRRPSTLRPKNLLTKR 717
            +V AK FE+VKNIAL+LEAESGGVLVSVDKVSK +AIIV+RG+DY RPSTLRPKNLLTKR
Sbjct: 705  MVNAKTFEQVKNIALALEAESGGVLVSVDKVSKKFAIIVYRGKDYHRPSTLRPKNLLTKR 764

Query: 716  KALARSIELQRREALMNHISTLQTRVNQLIAEIEQMASVKDRGDEELYNKLDSAYLTEDE 537
            KALARSIELQR+EAL+ HIS +Q++V+ L +EIEQM SVKD+GDE LYNKLDS+Y T+DE
Sbjct: 765  KALARSIELQRQEALLKHISAVQSKVDTLRSEIEQMDSVKDQGDEALYNKLDSSYPTDDE 824

Query: 536  ESEDGLEDAYLETYDSEDEVVDENDISVHNLQPETNFPYGFEDESETDL 390
            +SE+   DAYLETY+ E+E  DE + S+ N Q ETNFPY    +S+T+L
Sbjct: 825  DSEE--VDAYLETYNRENEGEDEGNYSICNPQLETNFPYFENQDSQTEL 871


>ref|XP_002280226.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic [Vitis vinifera]
            gi|297737163|emb|CBI26364.3| unnamed protein product
            [Vitis vinifera]
          Length = 902

 Score =  956 bits (2471), Expect = 0.0
 Identities = 536/892 (60%), Positives = 635/892 (71%), Gaps = 14/892 (1%)
 Frame = -2

Query: 3026 MATMPSCQFYQKNTFWINSFQCSVSKFHVRTTLQFFKYSSSLPSKNQSFRATNDAINSDS 2847
            MA +PS QFY   T +++SF          T LQFF+Y SS   +  S     + I S+S
Sbjct: 1    MALLPSRQFYPTTTSFLDSFHS--------TRLQFFRYGSSNRFRTHSSYVARNTIASNS 52

Query: 2846 IPKKNPQKRPHLLPKHRNKRWNSGSETPISQ-SSDGDRLSGSSWLDKWSGREKPNGLKRP 2670
                NPQ++ +++           + TP+SQ  S G   SG +W+DKW+G  + +  K  
Sbjct: 53   T---NPQRKSNIV----------FTNTPVSQYDSGGVSSSGGNWIDKWNGPHQKSHPKES 99

Query: 2669 PVVLNYRNSGDVXXXXXXXXXXXXXXXXTMERIVEKLKKFGYMDDVSEKNENVG-RVIEK 2493
              V+NYRNS  V                 ME+IVEKLKKFGYMDDV E  ENV  R+IEK
Sbjct: 100  RPVMNYRNSETVSRSDGGSGGGST-----MEKIVEKLKKFGYMDDVKETKENVQERIIEK 154

Query: 2492 GSIEDIFYVEEGLLPDTRGGFSEKSLFRDESS---NGKVRFPWXXXXXXXXXKRSLDRRK 2322
            GSIEDIFY+EEG+LP+ +GGFS  S    E+    NG+VRFPW          R   R  
Sbjct: 155  GSIEDIFYIEEGILPNPQGGFSLDSPLGVENKGDGNGEVRFPWERPKVEEGSVRIKSRT- 213

Query: 2321 VRSLAELTLPESELRRLKNLALRIKNKTKIXXXGVTQQVVETIREKWRTSEVVRLKFEGA 2142
              SLAELTLPESELRRL+NL +R KNKTKI   GVTQ VV+ IREKW+TSE+V+LK EGA
Sbjct: 214  --SLAELTLPESELRRLRNLTMRTKNKTKIGGGGVTQAVVDMIREKWKTSEIVKLKCEGA 271

Query: 2141 PALNMKRMHEILERKTGGLVIWRSGTSVSLYRGATYEDPTEQLKKRMFGKKEISRKSSST 1962
             ALNM+R+HEILERKTGGLVIWRSGTSVSLYRG +YE P  QL KR++ K E S  S S+
Sbjct: 272  AALNMRRIHEILERKTGGLVIWRSGTSVSLYRGVSYEVPV-QLNKRVYKKNETSHSSFSS 330

Query: 1961 --------ASDEAGQNPSGCGPLSDVDAPQAETISTGSESKNSETLLEVKYEDEVEKLLD 1806
                    +S++   N    G   +V A QA    T  E+K++E+  EVKYEDE++KLLD
Sbjct: 331  ITPNSFAISSNKTSGNAPAVGSNQNVHASQATLNITDGENKDTES--EVKYEDEIDKLLD 388

Query: 1805 GLGPRYTDWXXXXXXXXXXXXXXXXXPGYQPPFRLLPYGVRSTLGTKEATTLRRLARVLP 1626
            GLGPRYTDW                  GYQPPFR+LPYGVRS+LG KEAT LRRLARVLP
Sbjct: 389  GLGPRYTDWPGCDPLPIDADLLPGKIHGYQPPFRILPYGVRSSLGLKEATALRRLARVLP 448

Query: 1625 PHFALGRSRQHQGLAAAMIKLWERSKIAKIALKRGVQLTTSERMAEDIKRLTGGMLLSRN 1446
            PHFALGRSRQ +GLA AMIKLWERS IAK+ALKRGVQLTTSERMAEDIK+LTGG+LLSRN
Sbjct: 449  PHFALGRSRQLEGLAMAMIKLWERSSIAKVALKRGVQLTTSERMAEDIKKLTGGVLLSRN 508

Query: 1445 KDFLVYYRGKDFLSPDVXXXXXXXXXXXXXLQDEEEQARLRASAFVIPSVEDTGTSGTAG 1266
            KDFLV+YRGK+FLS DV             LQDEEEQARLRAS  + P+V  T   G+AG
Sbjct: 509  KDFLVFYRGKNFLSSDVTEALLERERLAKALQDEEEQARLRASTLITPTVGITEQVGSAG 568

Query: 1265 TLKETLDADSRWGKRLDDEEKEKMMREAEVSRHANLVRKLQKKLDFADRKLMKAERALSK 1086
            TL ETL+AD+RWGKRLDD +K+KM+++AEV+RHANLVRKL+++L  A+RKLMKAE ALSK
Sbjct: 569  TLGETLEADARWGKRLDDHDKQKMLKKAEVARHANLVRKLERRLALAERKLMKAENALSK 628

Query: 1085 VEESLNPADHPADPQSITDEERFMFWKLGLRMKAXXXXXXXXXXXGTVENMHLHWKYREL 906
            VEE L PA+ PADP+SITDEERFMF KLGLRMKA           GTVENMHLHWKYREL
Sbjct: 629  VEEFLKPANRPADPESITDEERFMFRKLGLRMKAFLLLGRRGVFSGTVENMHLHWKYREL 688

Query: 905  IKIIVKAKNFEEVKNIALSLEAESGGVLVSVDKVSKGYAIIVFRGRDYRRPSTLRPKNLL 726
            +KIIVKAK F++VK  AL+LE+ESGGVLVSVDKVSKG+AI+VFRG+DY+RPSTLRPKNLL
Sbjct: 689  VKIIVKAKTFDQVKKTALALESESGGVLVSVDKVSKGFAIVVFRGKDYQRPSTLRPKNLL 748

Query: 725  TKRKALARSIELQRREALMNHISTLQTRVNQLIAEIEQMASVKDRGDEELYNKLDSAYLT 546
            TKRKALARSIELQRREAL NHIS LQ  V +L +EIEQM  VKD GDEELY+KLDSAY T
Sbjct: 749  TKRKALARSIELQRREALYNHISALQRNVEKLRSEIEQMDIVKDHGDEELYDKLDSAYAT 808

Query: 545  EDEESEDGLEDAYLETYDSEDEVVDENDISVHNLQPETNFPYGFE-DESETD 393
            EDE +E+  ++AYLETY  E++   E+D S+HN   ETNFPY  + +E ET+
Sbjct: 809  EDEHTEEEGDEAYLETYADENDGEHESDNSIHNHHIETNFPYDIQGEEFETE 860


>ref|XP_008224429.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic [Prunus mume]
          Length = 899

 Score =  954 bits (2465), Expect = 0.0
 Identities = 532/889 (59%), Positives = 641/889 (72%), Gaps = 10/889 (1%)
 Frame = -2

Query: 3026 MATMPSCQFYQKNTFWINSFQCSVSKFHVRTTLQFFKYSSSLPSKNQSFRATNDAINSDS 2847
            M  +PS Q Y  + F  +SFQ S SKFH    +  F+  SS+P K  +F AT+  I+S  
Sbjct: 1    MTLVPSRQLYPTSLF--DSFQSSFSKFH-GPHIHLFRCGSSIPFKKHTFYATHYTISSTL 57

Query: 2846 IPKKNPQKRPHLLPKHRNKRWNSGSETPISQSSDGDRLSGSSWLDKWSGREKPNGLKRPP 2667
             P++NP ++ + + K++          PISQ       S SSW+DKW+   K N  K P 
Sbjct: 58   NPEQNPLRKSNFVRKNQ----------PISQYKPKKNFSSSSWIDKWNESHKHNCPKPPR 107

Query: 2666 VVLNYRNS-----GDVXXXXXXXXXXXXXXXXTMERIVEKLKKFGYMDDVSE-KNENVGR 2505
             VL+Y++S                        TME+IVEKLKKFGY+DD +E K E   R
Sbjct: 108  AVLDYQSSESGNLSGSGYAEGDSGGGRNSSGSTMEKIVEKLKKFGYVDDSNENKGEVRDR 167

Query: 2504 VIEKGSIEDIFYVEEGLLPDTRGGFSEKSLFRDES---SNGKVRFPWXXXXXXXXXKRSL 2334
            V+EKGS+EDIFYVEEG LP++RGGFSE+S    E+    +GKVRFPW         +   
Sbjct: 168  VMEKGSVEDIFYVEEGKLPNSRGGFSEESPLGIENVFGGDGKVRFPWEKPKEEEKQEEGS 227

Query: 2333 DRRKVR-SLAELTLPESELRRLKNLALRIKNKTKIXXXGVTQQVVETIREKWRTSEVVRL 2157
             RRK R SLAELTLPESELRRL NL  + K+KT+I   GVTQ VVE I E+W+TSE+VRL
Sbjct: 228  VRRKSRTSLAELTLPESELRRLTNLTFQKKHKTRIGGGGVTQAVVEMIHERWKTSEIVRL 287

Query: 2156 KFEGAPALNMKRMHEILERKTGGLVIWRSGTSVSLYRGATYEDPTEQLKKRMFGKKEISR 1977
            K EG PALNMKRMHEILERKTGGLVIWRSGTS+SLYRG +YE P+ +L K+++ K + S 
Sbjct: 288  KIEGPPALNMKRMHEILERKTGGLVIWRSGTSLSLYRGVSYEVPSVKLNKQIYKKNDTSS 347

Query: 1976 KSSSTASDEAGQNPSGCGPLSDVDAPQAETISTGSESKNSETLLEVKYEDEVEKLLDGLG 1797
                T +D++  + +     S+V  P+ +  +T  E +++E L EVKYEDEV+KLLD LG
Sbjct: 348  APFPTVADKSVGDFAELASYSNVKTPKEKLENTSQEKEDTEQLAEVKYEDEVDKLLDSLG 407

Query: 1796 PRYTDWXXXXXXXXXXXXXXXXXPGYQPPFRLLPYGVRSTLGTKEATTLRRLARVLPPHF 1617
            PR+ DW                 PGYQPPFR+LPYGVRSTLG KEAT+LRRLARVLPPHF
Sbjct: 408  PRFKDWPGCDPLPVDADMLPGIVPGYQPPFRVLPYGVRSTLGLKEATSLRRLARVLPPHF 467

Query: 1616 ALGRSRQHQGLAAAMIKLWERSKIAKIALKRGVQLTTSERMAEDIKRLTGGMLLSRNKDF 1437
            ALGRSRQ QGLA AM KLWE+S IAKIALKRGVQLTTSERMAEDIKRLTGG++LSRNKDF
Sbjct: 468  ALGRSRQLQGLAVAMAKLWEKSLIAKIALKRGVQLTTSERMAEDIKRLTGGVMLSRNKDF 527

Query: 1436 LVYYRGKDFLSPDVXXXXXXXXXXXXXLQDEEEQARLRASAFVIPSVEDTGTSGTAGTLK 1257
            LV+YRGK+FLSPDV             LQDEEEQARLRASA +IP+VE     GT GTL 
Sbjct: 528  LVFYRGKNFLSPDVTEALLERERLAKSLQDEEEQARLRASAMIIPNVEVAQHFGTTGTLG 587

Query: 1256 ETLDADSRWGKRLDDEEKEKMMREAEVSRHANLVRKLQKKLDFADRKLMKAERALSKVEE 1077
            ETLDAD++WGKRLD   KEK+MREA++ RHA+LVRKL++KL FA+RKLM+AE+ALSKVEE
Sbjct: 588  ETLDADAKWGKRLD---KEKVMREADILRHAHLVRKLERKLSFAERKLMRAEQALSKVEE 644

Query: 1076 SLNPADHPADPQSITDEERFMFWKLGLRMKAXXXXXXXXXXXGTVENMHLHWKYRELIKI 897
            SL P+   ADP+SITDEERFMF KLGLRMKA           GTVENMHLHWKYREL+KI
Sbjct: 645  SLKPSKQQADPESITDEERFMFRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELVKI 704

Query: 896  IVKAKNFEEVKNIALSLEAESGGVLVSVDKVSKGYAIIVFRGRDYRRPSTLRPKNLLTKR 717
            +V AK FE+VKNIAL+LEAESGGVLVSVDKVSK +AIIV+RG+DY RPSTLRPKNLLTKR
Sbjct: 705  MVNAKTFEQVKNIALALEAESGGVLVSVDKVSKKFAIIVYRGKDYHRPSTLRPKNLLTKR 764

Query: 716  KALARSIELQRREALMNHISTLQTRVNQLIAEIEQMASVKDRGDEELYNKLDSAYLTEDE 537
            KALARSIELQR+EAL+ HIS +Q++V+ L  EIEQM SVKD+GDE LYNKLDS+Y T+DE
Sbjct: 765  KALARSIELQRQEALLKHISAVQSKVDTLRCEIEQMDSVKDQGDEALYNKLDSSYPTDDE 824

Query: 536  ESEDGLEDAYLETYDSEDEVVDENDISVHNLQPETNFPYGFEDESETDL 390
            +SE+G  DAYLETY+SE++  DE + S+ N   ETNFPY    +S+T+L
Sbjct: 825  DSEEG--DAYLETYNSENDGEDEGNYSICNPHLETNFPYFENQDSQTEL 871


>ref|XP_006489518.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like [Citrus sinensis]
          Length = 933

 Score =  941 bits (2431), Expect = 0.0
 Identities = 535/921 (58%), Positives = 640/921 (69%), Gaps = 42/921 (4%)
 Frame = -2

Query: 3026 MATMPSCQFYQKNTFWINSFQCSVSKFHVRTTLQFFKYSSSLPSKNQSFRATNDAINSDS 2847
            MA +PS QF      + +SFQ S SKFH  T   FF+   S+P KN+ F       +S+S
Sbjct: 1    MALVPSRQFCPATAIF-DSFQSSFSKFH-GTHFHFFRCGHSIPLKNRFFYQN---FSSNS 55

Query: 2846 IPKKNPQKRPHLLPKHRNKRWNSGSETPISQSSDGDRL---SGSSWLDKWSGREKPNGLK 2676
              +KNP +          K  +  +    SQ    D     S SSWL KW+   K N LK
Sbjct: 56   AHEKNPPR----------KTCSFSTNNFFSQHDKDDNANLCSSSSWLVKWNKPNKYNRLK 105

Query: 2675 RPPVVLNYR-NSGDVXXXXXXXXXXXXXXXXTME-------RIVEKLKKFGYM------- 2541
             P   +NYR N+ D+                 ++       +IVEKLKKFGY+       
Sbjct: 106  PPQASVNYRKNNVDLSALGFARTDSDGNGVGGVDDGGNTMGKIVEKLKKFGYVGDGDGDG 165

Query: 2540 DDVSEKNENVGRVIEKGSIEDIFYVEEGLLPDTRGGFSEKS---LFRDESSNGKVRFPWX 2370
            D+   + +   RVIEKGSIEDIFYVEEGLLP+ RGGFS++S   L  +  S+G+V+FPW 
Sbjct: 166  DNDERRGQGKERVIEKGSIEDIFYVEEGLLPNARGGFSKESPLGLGEEVGSDGEVKFPWE 225

Query: 2369 XXXXXXXXKRSLDRRKVR-SLAELTLPESELRRLKNLALRIKNKTKIXXXGVTQQVVETI 2193
                     R L +R  R SLAELTLPESELRRL+NL  + K+KT+I   G+TQ VV+ I
Sbjct: 226  KRKEEVAEGRWLVKRSSRTSLAELTLPESELRRLRNLTFQTKSKTRIKGAGLTQAVVDII 285

Query: 2192 REKWRTSEVVRLKFEGAPALNMKRMHEILERKTGGLVIWRSGTSVSLYRGATYEDPTEQL 2013
             EKW+TSE+VRLK EGAPALNMKRMHEILERKTGGLVIWRSGT+VSLYRG +YE P+ QL
Sbjct: 286  HEKWKTSEIVRLKIEGAPALNMKRMHEILERKTGGLVIWRSGTAVSLYRGVSYEVPSVQL 345

Query: 2012 KKRMFGKKEI-------------------SRKSSSTASDEAGQNPSGCGPLSDVDAPQAE 1890
             KR++ + E+                   S  S S A+D+  Q+PS     ++V A Q  
Sbjct: 346  NKRIYKRNELPASSVSQATDKQIHKQISMSGNSLSAAADKTAQDPSNFDSYNNVHATQVN 405

Query: 1889 TISTGSESKNSETLLEVKYEDEVEKLLDGLGPRYTDWXXXXXXXXXXXXXXXXXPGYQPP 1710
             + T SE + ++ + EVKYEDEVEKLLDGLGPRYTDW                 PGYQPP
Sbjct: 406  -LETASEEQETDFVREVKYEDEVEKLLDGLGPRYTDWPGCDPLPVDADMLPGIVPGYQPP 464

Query: 1709 FRLLPYGVRSTLGTKEATTLRRLARVLPPHFALGRSRQHQGLAAAMIKLWERSKIAKIAL 1530
            FR+LPYGVRSTL  KEAT L+RLARVLPPHFALGRSRQ QGLA AMIKLWE+S IAKIAL
Sbjct: 465  FRVLPYGVRSTLARKEATNLQRLARVLPPHFALGRSRQLQGLAVAMIKLWEKSSIAKIAL 524

Query: 1529 KRGVQLTTSERMAEDIKRLTGGMLLSRNKDFLVYYRGKDFLSPDVXXXXXXXXXXXXXLQ 1350
            KRGVQLTTSERM EDIK+LTGG LLSRNKDFLV+YRGK+FLSPDV             LQ
Sbjct: 525  KRGVQLTTSERMVEDIKKLTGGTLLSRNKDFLVFYRGKNFLSPDVTEALQERERLAKSLQ 584

Query: 1349 DEEEQARLRASAFVIPSVEDTGTSGTAGTLKETLDADSRWGKRLDDEEKEKMMREAEVSR 1170
            DEEEQARLRASAFV+PS+E    SGTAGTLKETLDA+SRWGKRLDD  KE ++REAEV R
Sbjct: 585  DEEEQARLRASAFVLPSIETIEKSGTAGTLKETLDANSRWGKRLDDSHKENLVREAEVRR 644

Query: 1169 HANLVRKLQKKLDFADRKLMKAERALSKVEESLNPADHPADPQSITDEERFMFWKLGLRM 990
            HA LV+KL+KKL  A+RKL++AERALSKVEESL PA+  ADP+SITDEERFMF KLGLRM
Sbjct: 645  HAYLVQKLEKKLARAERKLLRAERALSKVEESLKPAERQADPESITDEERFMFRKLGLRM 704

Query: 989  KAXXXXXXXXXXXGTVENMHLHWKYRELIKIIVKAKNFEEVKNIALSLEAESGGVLVSVD 810
            KA           GTVENMHLHWKYREL+KIIVK K F++ K IAL+LEAESGGVLVSVD
Sbjct: 705  KAFLLLGRRGVFDGTVENMHLHWKYRELVKIIVKVKTFDQAKKIALALEAESGGVLVSVD 764

Query: 809  KVSKGYAIIVFRGRDYRRPSTLRPKNLLTKRKALARSIELQRREALMNHISTLQTRVNQL 630
            K+SKGYA++V+RG+DY+RPSTLRPKNLLTKRKALARSIELQR+EAL+ H++TL++   +L
Sbjct: 765  KISKGYAMVVYRGKDYQRPSTLRPKNLLTKRKALARSIELQRQEALLKHVATLESNAGRL 824

Query: 629  IAEIEQMASVKDRGDEELYNKLDSAYLTEDEESEDGLEDAYLETYDSEDEVVDENDISVH 450
             +EIEQM SVK  GDE+LY+KLDSAY TED++SED  ++AYLE Y   ++  DE D S H
Sbjct: 825  RSEIEQMNSVKGTGDEQLYDKLDSAYATEDDDSEDEGDEAYLEMYAGGNDNEDEIDNSTH 884

Query: 449  NLQPETNFPYGFED-ESETDL 390
            NL+ E++FPY  +D ESET+L
Sbjct: 885  NLEMESDFPYHAQDQESETEL 905


>ref|XP_007034974.1| CRM family member 3A isoform 1 [Theobroma cacao]
            gi|508714003|gb|EOY05900.1| CRM family member 3A isoform
            1 [Theobroma cacao]
          Length = 876

 Score =  941 bits (2431), Expect = 0.0
 Identities = 513/893 (57%), Positives = 637/893 (71%), Gaps = 14/893 (1%)
 Frame = -2

Query: 3026 MATMPSCQFYQ----KNTFWINSFQCSVSKFHVRTTLQFFKY-SSSLPSKNQSFRATNDA 2862
            M  +P+ QF+     K+TF ++SFQ  +SKFH    L F  Y SS+ P K  +  A N  
Sbjct: 1    MTLLPTRQFHPATTTKSTF-LDSFQTRLSKFH-GLPLPFCSYDSSNFPLKTSTLYAANYT 58

Query: 2861 INSDSIPKKNPQKRPHLLPKHRNKRWNSGSETPISQSSDGDRLSGSSWLDKWSGREKPNG 2682
            + S+S+  + P+ +    P                     D    S+WLD W+   K  G
Sbjct: 59   VTSNSLFHQYPKSKTKAFPTK-------------------DPTFRSNWLDSWNKTHKGFG 99

Query: 2681 LKRPPVVLNYRNSGDVXXXXXXXXXXXXXXXXT-MERIVEKLKKFGYMDDVSEKNEN--- 2514
             K P  V NYR  GDV                + ME+IVEKLKKFGY+ + +E+ E    
Sbjct: 100  PKPPKTVFNYRKKGDVWSLSYSQSDNNGRSSSSTMEKIVEKLKKFGYIGEENEQKEKGEE 159

Query: 2513 -VGRVIEKGSIEDIFYVEEGLLPDTRGGFSEKSLFRDES---SNGKVRFPWXXXXXXXXX 2346
               RVIE+GSIEDIFYVEEG+LP+ RGGFS++S    E+   S+G+VRFPW         
Sbjct: 160  EPKRVIERGSIEDIFYVEEGMLPNNRGGFSKESPLGMENVFGSDGEVRFPWEKRKEDEEE 219

Query: 2345 KRSLDRRKVR-SLAELTLPESELRRLKNLALRIKNKTKIXXXGVTQQVVETIREKWRTSE 2169
                 RR  + SLAELTLPESELRRL+NL  R K+K +I   GVTQ+VV+TI EKW+T E
Sbjct: 220  GGWTARRDSKTSLAELTLPESELRRLRNLTFRTKSKVRIKGAGVTQEVVDTIHEKWKTEE 279

Query: 2168 VVRLKFEGAPALNMKRMHEILERKTGGLVIWRSGTSVSLYRGATYEDPTEQLKKRMFGKK 1989
            +VRLK EGAPALNMKRMHEILERKTGGLVIWRSGTSVSLYRG +YE P+  L KR++ + 
Sbjct: 280  IVRLKIEGAPALNMKRMHEILERKTGGLVIWRSGTSVSLYRGVSYEVPSVHLSKRIYKRN 339

Query: 1988 EISRKSSSTASDEAGQNPSGCGPLSDVDAPQAETISTGSESKNSETLLEVKYEDEVEKLL 1809
            E    +  + SD+  ++ S  G   DV +PQA + +    +K++E+L E++YEDEV+KLL
Sbjct: 340  ETFTYALPSVSDKT-KDLSSLGSHKDVVSPQANSETAAEGNKDTESLPEIRYEDEVDKLL 398

Query: 1808 DGLGPRYTDWXXXXXXXXXXXXXXXXXPGYQPPFRLLPYGVRSTLGTKEATTLRRLARVL 1629
            +GLGPRYTDW                  GYQPPFR+LPYGVRS+LG KEAT+LRRLARVL
Sbjct: 399  EGLGPRYTDWPGCNPLPVDADLLPGIVAGYQPPFRVLPYGVRSSLGLKEATSLRRLARVL 458

Query: 1628 PPHFALGRSRQHQGLAAAMIKLWERSKIAKIALKRGVQLTTSERMAEDIKRLTGGMLLSR 1449
            PPHFA+GRSRQ QGLA AMIKLWE+S IAKIALKRGVQLTTSERMAEDIK+LTGGMLLSR
Sbjct: 459  PPHFAIGRSRQLQGLAVAMIKLWEKSSIAKIALKRGVQLTTSERMAEDIKKLTGGMLLSR 518

Query: 1448 NKDFLVYYRGKDFLSPDVXXXXXXXXXXXXXLQDEEEQARLRASAFVIPSVEDTGTSGTA 1269
            NKDFLV+YRGK+FLS DV             LQDEEEQARLRASAF++PS E    SG A
Sbjct: 519  NKDFLVFYRGKNFLSADVAEALVERERLAKSLQDEEEQARLRASAFLVPSTEVAEQSGAA 578

Query: 1268 GTLKETLDADSRWGKRLDDEEKEKMMREAEVSRHANLVRKLQKKLDFADRKLMKAERALS 1089
            GTL ETLDAD+RWGKRLD+  KEK+M+EAE+ RHANLVRKL K L FADRKL+KAERAL+
Sbjct: 579  GTLGETLDADARWGKRLDNHHKEKVMKEAEILRHANLVRKLDKNLAFADRKLLKAERALT 638

Query: 1088 KVEESLNPADHPADPQSITDEERFMFWKLGLRMKAXXXXXXXXXXXGTVENMHLHWKYRE 909
            KVE+ L PAD  ADP+SITDEERFMF KLGLRMKA           GT+ENMHLHWKYRE
Sbjct: 639  KVEDYLKPADRQADPESITDEERFMFRKLGLRMKAFLLLGRRGVFDGTIENMHLHWKYRE 698

Query: 908  LIKIIVKAKNFEEVKNIALSLEAESGGVLVSVDKVSKGYAIIVFRGRDYRRPSTLRPKNL 729
            L+KII+KAK F++VK +AL+LEAESGGVLVSVD++SKGYAIIV+RG+DY+RPST+RPKNL
Sbjct: 699  LVKIIMKAKTFDQVKKVALALEAESGGVLVSVDRISKGYAIIVYRGKDYQRPSTIRPKNL 758

Query: 728  LTKRKALARSIELQRREALMNHISTLQTRVNQLIAEIEQMASVKDRGDEELYNKLDSAYL 549
            LTKR+ALARSIELQRREAL+ H+S LQ +V+++ +EI+QM S++++GDEE Y++LDS+Y 
Sbjct: 759  LTKRRALARSIELQRREALVKHVSALQAKVDKIRSEIDQMHSMEEQGDEEFYDRLDSSYP 818

Query: 548  TEDEESEDGLEDAYLETYDSEDEVVDENDISVHNLQPETNFPYGFEDESETDL 390
            T+D+++E+  ++AYLETY+SE++  +END  +HNL  ET FP+  +   E+ +
Sbjct: 819  TDDDDTEEEGDEAYLETYESENDAEEENDELIHNLHLETKFPFHDQHHQESGI 871


>gb|KDO45877.1| hypothetical protein CISIN_1g002316mg [Citrus sinensis]
          Length = 936

 Score =  938 bits (2424), Expect = 0.0
 Identities = 534/924 (57%), Positives = 640/924 (69%), Gaps = 45/924 (4%)
 Frame = -2

Query: 3026 MATMPSCQFYQKNTFWINSFQCSVSKFHVRTTLQFFKYSSSLPSKNQSFRATNDAINSDS 2847
            MA +PS QF      + +SFQ S SKFH  T   FF+   S+P KN+ F       +S+S
Sbjct: 1    MALVPSRQFCPATAIF-DSFQSSFSKFH-GTHFHFFRCGHSIPLKNRFFYQN---FSSNS 55

Query: 2846 IPKKNPQKRPHLLPKHRNKRWNSGSETPISQSSDGDRL---SGSSWLDKWSGREKPNGLK 2676
              +KNP +          K  +  +    SQ    D     S SSWL KW+   K N LK
Sbjct: 56   AHEKNPPR----------KTCSFSTNNFFSQHDKDDNANLCSSSSWLVKWNKPNKYNRLK 105

Query: 2675 RPPVVLNYR-NSGDVXXXXXXXXXXXXXXXXTME-------RIVEKLKKFGYM------- 2541
             P   +NYR N+ D+                 ++       +IVEKLKKFGY+       
Sbjct: 106  PPQASVNYRKNNVDLSALGFARTDSDGNGVGGVDDGGSTMGKIVEKLKKFGYVGDGDGDG 165

Query: 2540 --DDVSEKNENVGRVIEKGSIEDIFYVEEGLLPDTRGGFSEKS---LFRDESSNGKVRFP 2376
              D+   + +   RVIEKGSIEDIFYVEEGLLP+ RGGFS++S   L  +  S+G+V+FP
Sbjct: 166  DGDNDERRGQGKERVIEKGSIEDIFYVEEGLLPNARGGFSKESPLGLGEEVGSDGEVKFP 225

Query: 2375 WXXXXXXXXXKRSLDRRKVR--SLAELTLPESELRRLKNLALRIKNKTKIXXXGVTQQVV 2202
            W          R L +R+    SLAELTLPESELRRL+NL  + K+KT+I   G+TQ VV
Sbjct: 226  WEKRKEEVAEGRWLVKRRSSRTSLAELTLPESELRRLRNLTFQTKSKTRIKGAGLTQAVV 285

Query: 2201 ETIREKWRTSEVVRLKFEGAPALNMKRMHEILERKTGGLVIWRSGTSVSLYRGATYEDPT 2022
            + I EKW+TSE+VRLK EGAPALNMKRMHEILERKTGGLVIWRSGT+VSLYRG +YE P+
Sbjct: 286  DIIHEKWKTSEIVRLKIEGAPALNMKRMHEILERKTGGLVIWRSGTAVSLYRGVSYEVPS 345

Query: 2021 EQLKKRMFGKKEI-------------------SRKSSSTASDEAGQNPSGCGPLSDVDAP 1899
             QL KR++ + E+                   S  S S A+D+  Q+PS     ++V A 
Sbjct: 346  VQLNKRIYKRNELPASSVSQATDKQIHKQISMSGNSLSAAADKTAQDPSNFDSYNNVHAT 405

Query: 1898 QAETISTGSESKNSETLLEVKYEDEVEKLLDGLGPRYTDWXXXXXXXXXXXXXXXXXPGY 1719
            Q   + T SE + ++ + EVKYEDEVEKLLDGLGPRYTDW                 PGY
Sbjct: 406  QVN-LETASEEQETDFVREVKYEDEVEKLLDGLGPRYTDWPGCDPLPVDADMLPGIVPGY 464

Query: 1718 QPPFRLLPYGVRSTLGTKEATTLRRLARVLPPHFALGRSRQHQGLAAAMIKLWERSKIAK 1539
            QPPFR+LPYGVRSTL  KEAT L+RLARVLPPHFALGRSRQ QGLA AMIKLWE+S IAK
Sbjct: 465  QPPFRVLPYGVRSTLARKEATNLQRLARVLPPHFALGRSRQLQGLAVAMIKLWEKSSIAK 524

Query: 1538 IALKRGVQLTTSERMAEDIKRLTGGMLLSRNKDFLVYYRGKDFLSPDVXXXXXXXXXXXX 1359
            IALKRGVQLTTSERM EDIK+LTGG LLSRNKDFLV+YRGK+FLSPDV            
Sbjct: 525  IALKRGVQLTTSERMVEDIKKLTGGTLLSRNKDFLVFYRGKNFLSPDVTEALQERERLAK 584

Query: 1358 XLQDEEEQARLRASAFVIPSVEDTGTSGTAGTLKETLDADSRWGKRLDDEEKEKMMREAE 1179
             LQDEEEQARLRASAFV+PS+E    SGTAGTLKETLDA+SRWGKRLDD  KE ++REAE
Sbjct: 585  SLQDEEEQARLRASAFVLPSIETIEKSGTAGTLKETLDANSRWGKRLDDSHKENLVREAE 644

Query: 1178 VSRHANLVRKLQKKLDFADRKLMKAERALSKVEESLNPADHPADPQSITDEERFMFWKLG 999
            V RHA LV+KL+KKL  A+RKL++AERALSKVEESL PA+  ADP+SITDEERFMF KLG
Sbjct: 645  VRRHAYLVQKLEKKLARAERKLLRAERALSKVEESLKPAERQADPESITDEERFMFRKLG 704

Query: 998  LRMKAXXXXXXXXXXXGTVENMHLHWKYRELIKIIVKAKNFEEVKNIALSLEAESGGVLV 819
            LRMKA           GTVENMHLHWKYREL+KIIVK K F++ K IAL+LEAESGGVLV
Sbjct: 705  LRMKAFLLLGRRGVFDGTVENMHLHWKYRELVKIIVKVKTFDQAKKIALALEAESGGVLV 764

Query: 818  SVDKVSKGYAIIVFRGRDYRRPSTLRPKNLLTKRKALARSIELQRREALMNHISTLQTRV 639
            SVDK+SKGYA++V+RG+DY+RPSTLRPKNLLTKRKALARSIELQR+EAL+ H++TL++  
Sbjct: 765  SVDKISKGYAMVVYRGKDYQRPSTLRPKNLLTKRKALARSIELQRQEALLKHVATLESNA 824

Query: 638  NQLIAEIEQMASVKDRGDEELYNKLDSAYLTEDEESEDGLEDAYLETYDSEDEVVDENDI 459
             +L +EIEQM SVK  GDE+LY+KLDSAY TED++SED  ++AYLE Y   ++  DE D 
Sbjct: 825  GRLRSEIEQMNSVKGTGDEQLYDKLDSAYATEDDDSEDEGDEAYLEMYAGGNDNEDEIDN 884

Query: 458  SVHNLQPETNFPYGFED-ESETDL 390
            S HNL+ E++FPY  +D ESET+L
Sbjct: 885  STHNLEMESDFPYHAQDQESETEL 908


>ref|XP_008391092.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic [Malus domestica]
          Length = 894

 Score =  932 bits (2410), Expect = 0.0
 Identities = 525/888 (59%), Positives = 637/888 (71%), Gaps = 9/888 (1%)
 Frame = -2

Query: 3026 MATMPSCQFYQKNTFWINSFQCSVSKFHVRTTLQFFKYS--SSLPSKNQSFRATNDAINS 2853
            M  +PS Q Y  N F  +SFQ S+SKF+    +QFF+Y   SS P    +F AT+  I+S
Sbjct: 1    MTLVPSLQLYPTNLF--DSFQRSLSKFN-GPHIQFFRYGHGSSTPFNKHTFYATHSIISS 57

Query: 2852 DSIPKKNPQKRPHLLPKHRNKRWNSGSETPISQSSDGDRLSGSSWLDKWSGREKPNGLKR 2673
               P +NP ++ + + ++R+          I Q      L  SSW+DKW+   K N LK 
Sbjct: 58   ---PDQNPVRKSNFVGRNRS----------IYQYKPXRNLCTSSWIDKWNESHKRNRLKP 104

Query: 2672 PPVVLNYRNSGDVXXXXXXXXXXXXXXXXTMERIVEKLKKFGYMDDVSE-KNENVGRVIE 2496
            P  VL+Y++S                   TM++IVEKL KFGY+DD  E K E   RVIE
Sbjct: 105  PQAVLDYQSSES-----GNLSGSGNGGGSTMQKIVEKLTKFGYVDDSXEGKGEARERVIE 159

Query: 2495 KGSIEDIFYVEEGLLPDTRGGFSEKSLFRDES---SNGKVRFPWXXXXXXXXXKRSLDRR 2325
            KGS+EDIFYVEEG+LP++RGGFS +S    E+   S+GKVRFPW              RR
Sbjct: 160  KGSVEDIFYVEEGMLPNSRGGFSAESPLGIENVFGSDGKVRFPWEKPAEEEKQDZGSVRR 219

Query: 2324 KVR-SLAELTLPESELRRLKNLALRIKNKTKIXXXGVTQQVVETIREKWRTSEVVRLKFE 2148
            K R S+AELTLPESELRRL+NL  + K+KTKI   GVTQ VV+ I E+W+TSE+VRLK E
Sbjct: 220  KSRTSVAELTLPESELRRLRNLTFQKKHKTKIGGAGVTQAVVDMIHERWKTSEIVRLKVE 279

Query: 2147 GAPALNMKRMHEILERKTGGLVIWRSGTSVSLYRGATYEDPTEQLKKRMFGKKEISRKSS 1968
            G PALNMKRMHEILERKTGGLV+WRSGTS+SLYRG +YE P+ QL KR++ KKEIS  +S
Sbjct: 280  GPPALNMKRMHEILERKTGGLVVWRSGTSLSLYRGVSYEVPSVQLNKRIYKKKEISSSTS 339

Query: 1967 -STASDEAGQNPSGCGPLSDVDAPQAETISTGSESKNSETLLEVKYEDEVEKLLDGLGPR 1791
                +D++  +        +V+ PQ +  ST  E K+++ L EVKYEDEV+KLLD LGPR
Sbjct: 340  FPNVADKSLGDFVELASYGNVNTPQEKPESTSLEKKDTDQLPEVKYEDEVDKLLDSLGPR 399

Query: 1790 YTDWXXXXXXXXXXXXXXXXXPGYQPPFRLLPYGVRSTLGTKEATTLRRLARVLPPHFAL 1611
            + DW                 PGY+PPFR+LPYGV S+LG +EAT+LRRLARVLPPHFAL
Sbjct: 400  FKDWPGCDPLPVDADMLPGLVPGYEPPFRVLPYGVXSSLGLQEATSLRRLARVLPPHFAL 459

Query: 1610 GRSRQHQGLAAAMIKLWERSKIAKIALKRGVQLTTSERMAEDIKRLTGGMLLSRNKDFLV 1431
            GRSRQ QGLA AM KLWERS IAKIALKRGVQLTTSERMAEDIKRLTGG+LLSRNKDFLV
Sbjct: 460  GRSRQLQGLAVAMAKLWERSLIAKIALKRGVQLTTSERMAEDIKRLTGGVLLSRNKDFLV 519

Query: 1430 YYRGKDFLSPDVXXXXXXXXXXXXXLQDEEEQARLRASAFVIPSVEDTGTSGTAGTLKET 1251
            +YRGK+FLSP+V             LQDEEEQARLRASA VIP+VE     GTAGTL ET
Sbjct: 520  FYRGKNFLSPEVTEALLERERLAKSLQDEEEQARLRASAMVIPNVEQAQHFGTAGTLAET 579

Query: 1250 LDADSRWGKRLDDEEKEKMMREAEVSRHANLVRKLQKKLDFADRKLMKAERALSKVEESL 1071
            LDAD++WGK +D+  K+K+M+EA++ RHANLVRKL++KL FA+RKLMKAE+ALSKVEE L
Sbjct: 580  LDADAKWGKMMDNHHKKKVMQEADILRHANLVRKLERKLAFAERKLMKAEQALSKVEECL 639

Query: 1070 NPADHPADPQSITDEERFMFWKLGLRMKAXXXXXXXXXXXGTVENMHLHWKYRELIKIIV 891
             P+   ADP SITDEERFMF KLGLRMKA           GTVENMHLHWKYREL+KI+V
Sbjct: 640  KPSTLQADPDSITDEERFMFRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELVKIMV 699

Query: 890  KAKNFEEVKNIALSLEAESGGVLVSVDKVSKGYAIIVFRGRDYRRPSTLRPKNLLTKRKA 711
             AK+FE+VK IAL+LEAESGGVLVSVDKVSK +AIIV+RG+DY RPSTLRPKNLLTKRKA
Sbjct: 700  NAKSFEQVKKIALALEAESGGVLVSVDKVSKKFAIIVYRGKDYHRPSTLRPKNLLTKRKA 759

Query: 710  LARSIELQRREALMNHISTLQTRVNQLIAEIEQMASVKDRGDEELYNKLDSAYLTEDEES 531
            LARSIE+QR+EAL+ HIS +Q++V+ L +EIEQM  VK+RGDE LYNKLDS+Y T+D++ 
Sbjct: 760  LARSIEIQRQEALLKHISXVQSKVDTLRSEIEQMDVVKERGDEVLYNKLDSSYPTDDDDD 819

Query: 530  EDGLEDAYLETYDSEDEVVDENDISVHNLQPETNFPYGFEDE-SETDL 390
             +  ED YLETY  ED   DE + S H+   ETNFPY  +++ S+T+L
Sbjct: 820  SEE-EDVYLETYSXEDNGEDEGNYSTHDPHLETNFPYHIQNQASQTEL 866


>gb|KDO45878.1| hypothetical protein CISIN_1g002316mg [Citrus sinensis]
          Length = 908

 Score =  931 bits (2407), Expect = 0.0
 Identities = 527/905 (58%), Positives = 631/905 (69%), Gaps = 26/905 (2%)
 Frame = -2

Query: 3026 MATMPSCQFYQKNTFWINSFQCSVSKFHVRTTLQFFKYSSSLPSKNQSFRATNDAINSDS 2847
            MA +PS QF      + +SFQ S SKFH  T   FF+   S+P KN+ F       +S+S
Sbjct: 1    MALVPSRQFCPATAIF-DSFQSSFSKFH-GTHFHFFRCGHSIPLKNRFFYQN---FSSNS 55

Query: 2846 IPKKNPQKRPHLLPKHRNKRWNSGSETPISQSSDGDRL---SGSSWLDKWSGREKPNGLK 2676
              +KNP +          K  +  +    SQ    D     S SSWL KW+   K N LK
Sbjct: 56   AHEKNPPR----------KTCSFSTNNFFSQHDKDDNANLCSSSSWLVKWNKPNKYNRLK 105

Query: 2675 RPPVVLNYR-NSGDVXXXXXXXXXXXXXXXXTME-------RIVEKLKKFGYM------- 2541
             P   +NYR N+ D+                 ++       +IVEKLKKFGY+       
Sbjct: 106  PPQASVNYRKNNVDLSALGFARTDSDGNGVGGVDDGGSTMGKIVEKLKKFGYVGDGDGDG 165

Query: 2540 --DDVSEKNENVGRVIEKGSIEDIFYVEEGLLPDTRGGFSEKS---LFRDESSNGKVRFP 2376
              D+   + +   RVIEKGSIEDIFYVEEGLLP+ RGGFS++S   L  +  S+G+V+FP
Sbjct: 166  DGDNDERRGQGKERVIEKGSIEDIFYVEEGLLPNARGGFSKESPLGLGEEVGSDGEVKFP 225

Query: 2375 WXXXXXXXXXKRSLDRRKVR--SLAELTLPESELRRLKNLALRIKNKTKIXXXGVTQQVV 2202
            W          R L +R+    SLAELTLPESELRRL+NL  + K+KT+I   G+TQ VV
Sbjct: 226  WEKRKEEVAEGRWLVKRRSSRTSLAELTLPESELRRLRNLTFQTKSKTRIKGAGLTQAVV 285

Query: 2201 ETIREKWRTSEVVRLKFEGAPALNMKRMHEILERKTGGLVIWRSGTSVSLYRGATYEDPT 2022
            + I EKW+TSE+VRLK EGAPALNMKRMHEILERKTGGLVIWRSGT+VSLYRG +YE P+
Sbjct: 286  DIIHEKWKTSEIVRLKIEGAPALNMKRMHEILERKTGGLVIWRSGTAVSLYRGVSYEVPS 345

Query: 2021 EQLKKRMFGKKEISRKSSSTASDEAGQNPSGCGPLSDVDAPQAETISTGSESKNSETLLE 1842
             QL KR++ + E+   S S A+D+                  +  + T SE + ++ + E
Sbjct: 346  VQLNKRIYKRNELPASSVSQATDKQIHK----------QISMSVNLETASEEQETDFVRE 395

Query: 1841 VKYEDEVEKLLDGLGPRYTDWXXXXXXXXXXXXXXXXXPGYQPPFRLLPYGVRSTLGTKE 1662
            VKYEDEVEKLLDGLGPRYTDW                 PGYQPPFR+LPYGVRSTL  KE
Sbjct: 396  VKYEDEVEKLLDGLGPRYTDWPGCDPLPVDADMLPGIVPGYQPPFRVLPYGVRSTLARKE 455

Query: 1661 ATTLRRLARVLPPHFALGRSRQHQGLAAAMIKLWERSKIAKIALKRGVQLTTSERMAEDI 1482
            AT L+RLARVLPPHFALGRSRQ QGLA AMIKLWE+S IAKIALKRGVQLTTSERM EDI
Sbjct: 456  ATNLQRLARVLPPHFALGRSRQLQGLAVAMIKLWEKSSIAKIALKRGVQLTTSERMVEDI 515

Query: 1481 KRLTGGMLLSRNKDFLVYYRGKDFLSPDVXXXXXXXXXXXXXLQDEEEQARLRASAFVIP 1302
            K+LTGG LLSRNKDFLV+YRGK+FLSPDV             LQDEEEQARLRASAFV+P
Sbjct: 516  KKLTGGTLLSRNKDFLVFYRGKNFLSPDVTEALQERERLAKSLQDEEEQARLRASAFVLP 575

Query: 1301 SVEDTGTSGTAGTLKETLDADSRWGKRLDDEEKEKMMREAEVSRHANLVRKLQKKLDFAD 1122
            S+E    SGTAGTLKETLDA+SRWGKRLDD  KE ++REAEV RHA LV+KL+KKL  A+
Sbjct: 576  SIETIEKSGTAGTLKETLDANSRWGKRLDDSHKENLVREAEVRRHAYLVQKLEKKLARAE 635

Query: 1121 RKLMKAERALSKVEESLNPADHPADPQSITDEERFMFWKLGLRMKAXXXXXXXXXXXGTV 942
            RKL++AERALSKVEESL PA+  ADP+SITDEERFMF KLGLRMKA           GTV
Sbjct: 636  RKLLRAERALSKVEESLKPAERQADPESITDEERFMFRKLGLRMKAFLLLGRRGVFDGTV 695

Query: 941  ENMHLHWKYRELIKIIVKAKNFEEVKNIALSLEAESGGVLVSVDKVSKGYAIIVFRGRDY 762
            ENMHLHWKYREL+KIIVK K F++ K IAL+LEAESGGVLVSVDK+SKGYA++V+RG+DY
Sbjct: 696  ENMHLHWKYRELVKIIVKVKTFDQAKKIALALEAESGGVLVSVDKISKGYAMVVYRGKDY 755

Query: 761  RRPSTLRPKNLLTKRKALARSIELQRREALMNHISTLQTRVNQLIAEIEQMASVKDRGDE 582
            +RPSTLRPKNLLTKRKALARSIELQR+EAL+ H++TL++   +L +EIEQM SVK  GDE
Sbjct: 756  QRPSTLRPKNLLTKRKALARSIELQRQEALLKHVATLESNAGRLRSEIEQMNSVKGTGDE 815

Query: 581  ELYNKLDSAYLTEDEESEDGLEDAYLETYDSEDEVVDENDISVHNLQPETNFPYGFED-E 405
            +LY+KLDSAY TED++SED  ++AYLE Y   ++  DE D S HNL+ E++FPY  +D E
Sbjct: 816  QLYDKLDSAYATEDDDSEDEGDEAYLEMYAGGNDNEDEIDNSTHNLEMESDFPYHAQDQE 875

Query: 404  SETDL 390
            SET+L
Sbjct: 876  SETEL 880