BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Forsythia21_contig00014278
         (744 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_009600688.1| PREDICTED: pentatricopeptide repeat-containi...   198   2e-48
ref|XP_009796738.1| PREDICTED: pentatricopeptide repeat-containi...   196   2e-47
ref|XP_009796737.1| PREDICTED: pentatricopeptide repeat-containi...   196   2e-47
ref|XP_010100361.1| hypothetical protein L484_027670 [Morus nota...   195   2e-47
ref|XP_002530052.1| pentatricopeptide repeat-containing protein,...   194   6e-47
ref|XP_010683589.1| PREDICTED: pentatricopeptide repeat-containi...   192   2e-46
ref|XP_011086684.1| PREDICTED: pentatricopeptide repeat-containi...   191   3e-46
ref|XP_011086681.1| PREDICTED: pentatricopeptide repeat-containi...   191   3e-46
ref|XP_007044848.1| Pentatricopeptide repeat superfamily protein...   191   4e-46
ref|XP_004240634.1| PREDICTED: pentatricopeptide repeat-containi...   190   7e-46
ref|XP_006364563.1| PREDICTED: pentatricopeptide repeat-containi...   189   1e-45
ref|XP_008221931.1| PREDICTED: pentatricopeptide repeat-containi...   186   1e-44
gb|KHN29017.1| Pentatricopeptide repeat-containing protein, mito...   184   6e-44
ref|XP_003531325.2| PREDICTED: pentatricopeptide repeat-containi...   184   6e-44
ref|XP_004310156.1| PREDICTED: pentatricopeptide repeat-containi...   183   8e-44
ref|XP_012845460.1| PREDICTED: pentatricopeptide repeat-containi...   182   2e-43
ref|XP_002282301.1| PREDICTED: pentatricopeptide repeat-containi...   181   3e-43
ref|XP_008340122.1| PREDICTED: pentatricopeptide repeat-containi...   181   4e-43
gb|KHG22195.1| hypothetical protein F383_00597 [Gossypium arboreum]   181   5e-43
ref|XP_007159689.1| hypothetical protein PHAVU_002G258900g [Phas...   181   5e-43

>ref|XP_009600688.1| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
           mitochondrial [Nicotiana tomentosiformis]
           gi|697183334|ref|XP_009600689.1| PREDICTED:
           pentatricopeptide repeat-containing protein At1g13040,
           mitochondrial [Nicotiana tomentosiformis]
          Length = 511

 Score =  198 bits (504), Expect = 2e-48
 Identities = 94/129 (72%), Positives = 112/129 (86%)
 Frame = -3

Query: 742 DQMINMGKSPDCVLYTVIIDHLCKIGSVEMARSIFHDMVEQGIAPDVVCYNALISGFCKA 563
           DQMI+MG  PD VLYT IID+LCK G + MA+SIFHDMVEQG+  DV+ YNALI+GFCKA
Sbjct: 383 DQMISMGLFPDRVLYTSIIDNLCKTGKIGMAQSIFHDMVEQGVGADVISYNALINGFCKA 442

Query: 562 FRVSEAMHLYEEMQNRGLYPDELTFKLIIGGLIREKNFSLAYGVWDRMMEKGFTLDRDIS 383
           FRV+EA+ LYE+MQ R L PDE+TFKLIIGGL++EKNFS+A  +WD+MMEKGFTLDRD+S
Sbjct: 443 FRVNEALRLYEDMQARALDPDEITFKLIIGGLVQEKNFSVACAIWDQMMEKGFTLDRDLS 502

Query: 382 ETLINVINS 356
           +TLIN INS
Sbjct: 503 QTLINAINS 511



 Score = 78.6 bits (192), Expect = 4e-12
 Identities = 39/125 (31%), Positives = 67/125 (53%)
 Frame = -3

Query: 742 DQMINMGKSPDCVLYTVIIDHLCKIGSVEMARSIFHDMVEQGIAPDVVCYNALISGFCKA 563
           ++M   G  PDC  Y  ++   CK   ++ A  +    +E     DVV YN +I   CK 
Sbjct: 278 EKMEGNGLEPDCYSYNQLLKGFCKANRLDKAYKLMTHKMEANGLVDVVSYNTIIRALCKT 337

Query: 562 FRVSEAMHLYEEMQNRGLYPDELTFKLIIGGLIREKNFSLAYGVWDRMMEKGFTLDRDIS 383
                A +L+EEM+ +G+ PD +TF ++I   ++E N S+A  ++D+M+  G   DR + 
Sbjct: 338 DCSKRAYNLFEEMEQKGIVPDVVTFTILIEASLKEGNSSVAKALFDQMISMGLFPDRVLY 397

Query: 382 ETLIN 368
            ++I+
Sbjct: 398 TSIID 402



 Score = 68.9 bits (167), Expect = 3e-09
 Identities = 39/115 (33%), Positives = 59/115 (51%)
 Frame = -3

Query: 712 DCVLYTVIIDHLCKIGSVEMARSIFHDMVEQGIAPDVVCYNALISGFCKAFRVSEAMHLY 533
           D V Y  II  LCK    + A ++F +M ++GI PDVV +  LI    K    S A  L+
Sbjct: 323 DVVSYNTIIRALCKTDCSKRAYNLFEEMEQKGIVPDVVTFTILIEASLKEGNSSVAKALF 382

Query: 532 EEMQNRGLYPDELTFKLIIGGLIREKNFSLAYGVWDRMMEKGFTLDRDISETLIN 368
           ++M + GL+PD + +  II  L +     +A  ++  M+E+G   D      LIN
Sbjct: 383 DQMISMGLFPDRVLYTSIIDNLCKTGKIGMAQSIFHDMVEQGVGADVISYNALIN 437



 Score = 66.2 bits (160), Expect = 2e-08
 Identities = 36/123 (29%), Positives = 60/123 (48%)
 Frame = -3

Query: 739 QMINMGKSPDCVLYTVIIDHLCKIGSVEMARSIFHDMVEQGIAPDVVCYNALISGFCKAF 560
           +M  MG S + + Y+  I  LCK+ + ++   + +DM   G  PD   YN  ++  C   
Sbjct: 69  EMKPMGFSLNSLTYSRFICGLCKVKNFDLIHRLLNDMDMVGTVPDFWAYNTYLNLLCSEH 128

Query: 559 RVSEAMHLYEEMQNRGLYPDELTFKLIIGGLIREKNFSLAYGVWDRMMEKGFTLDRDISE 380
            V  A+ L+  M  +G  PD +++ ++I GL R   F  A  +W  M+ KG   D    +
Sbjct: 129 LVDIALELFRVMGAKGKEPDVVSYTILISGLCRIGRFDNAVEMWHTMIRKGLIPDNKACK 188

Query: 379 TLI 371
            L+
Sbjct: 189 ALV 191



 Score = 63.5 bits (153), Expect = 1e-07
 Identities = 38/125 (30%), Positives = 59/125 (47%)
 Frame = -3

Query: 742 DQMINMGKSPDCVLYTVIIDHLCKIGSVEMARSIFHDMVEQGIAPDVVCYNALISGFCKA 563
           + M  +G  PD   Y   ++ LC    V++A  +F  M  +G  PDVV Y  LISG C+ 
Sbjct: 103 NDMDMVGTVPDFWAYNTYLNLLCSEHLVDIALELFRVMGAKGKEPDVVSYTILISGLCRI 162

Query: 562 FRVSEAMHLYEEMQNRGLYPDELTFKLIIGGLIREKNFSLAYGVWDRMMEKGFTLDRDIS 383
            R   A+ ++  M  +GL PD    K ++ GL       LAY +   ++      + +I 
Sbjct: 163 GRFDNAVEMWHTMIRKGLIPDNKACKALVFGLCGSGKVDLAYELTLGILRGQVKFNTEIY 222

Query: 382 ETLIN 368
             LI+
Sbjct: 223 NVLIH 227



 Score = 62.8 bits (151), Expect = 2e-07
 Identities = 34/125 (27%), Positives = 59/125 (47%)
 Frame = -3

Query: 703 LYTVIIDHLCKIGSVEMARSIFHDMVEQGIAPDVVCYNALISGFCKAFRVSEAMHLYEEM 524
           +Y V+I   C  G ++ A++I   M      PD+V YN  ++  CK   + EA  L E+M
Sbjct: 221 IYNVLIHGFCGAGRIDKAQAIKTFMRRNRCEPDLVTYNVFLNYCCKELMLEEAEKLIEKM 280

Query: 523 QNRGLYPDELTFKLIIGGLIREKNFSLAYGVWDRMMEKGFTLDRDISETLINVINSKDAS 344
           +  GL PD  ++  ++ G  +      AY +    ME    +D     T+I  +   D S
Sbjct: 281 EGNGLEPDCYSYNQLLKGFCKANRLDKAYKLMTHKMEANGLVDVVSYNTIIRALCKTDCS 340

Query: 343 RGSFS 329
           + +++
Sbjct: 341 KRAYN 345


>ref|XP_009796738.1| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
           mitochondrial isoform X2 [Nicotiana sylvestris]
          Length = 372

 Score =  196 bits (497), Expect = 2e-47
 Identities = 93/129 (72%), Positives = 111/129 (86%)
 Frame = -3

Query: 742 DQMINMGKSPDCVLYTVIIDHLCKIGSVEMARSIFHDMVEQGIAPDVVCYNALISGFCKA 563
           DQMI+MG+ PD +LYT IID+LCK G + MA+SIFHDMVEQG+  DV+ YNALISGFCKA
Sbjct: 244 DQMISMGRFPDRILYTSIIDNLCKTGKIGMAQSIFHDMVEQGVGADVISYNALISGFCKA 303

Query: 562 FRVSEAMHLYEEMQNRGLYPDELTFKLIIGGLIREKNFSLAYGVWDRMMEKGFTLDRDIS 383
            RV+EA+ LYE+MQ R L PDE+TFKLIIGGL++EKN S+A  VWD+MMEKGFTLDRD+S
Sbjct: 304 SRVNEALRLYEDMQARALDPDEITFKLIIGGLVQEKNLSVACAVWDQMMEKGFTLDRDLS 363

Query: 382 ETLINVINS 356
           +TLIN INS
Sbjct: 364 QTLINAINS 372



 Score = 78.6 bits (192), Expect = 4e-12
 Identities = 42/126 (33%), Positives = 71/126 (56%), Gaps = 1/126 (0%)
 Frame = -3

Query: 742 DQMINMGKSPDCVLYTVIIDHLCKIGSVEMARSIF-HDMVEQGIAPDVVCYNALISGFCK 566
           ++M   G  PDC  Y  ++  LCK   ++ A  +  H M  +G+  DVV YN +I   CK
Sbjct: 139 EKMEGNGLEPDCYSYNQLLKGLCKANRLDKAYKLMTHKMEAKGLV-DVVSYNTIIRALCK 197

Query: 565 AFRVSEAMHLYEEMQNRGLYPDELTFKLIIGGLIREKNFSLAYGVWDRMMEKGFTLDRDI 386
                 A +L+EEM+ +G+ PD +TF ++I   ++E N S+A  ++D+M+  G   DR +
Sbjct: 198 TDCNKRAYNLFEEMEQKGIVPDVVTFTILIEASLKEGNSSVAKALFDQMISMGRFPDRIL 257

Query: 385 SETLIN 368
             ++I+
Sbjct: 258 YTSIID 263



 Score = 65.5 bits (158), Expect = 3e-08
 Identities = 35/125 (28%), Positives = 61/125 (48%)
 Frame = -3

Query: 703 LYTVIIDHLCKIGSVEMARSIFHDMVEQGIAPDVVCYNALISGFCKAFRVSEAMHLYEEM 524
           +Y V+I   C  G ++ A++I   M   G  PD+V YN  ++  CK   + EA  L E+M
Sbjct: 82  IYNVLIHGFCGAGRIDKAQAIKTFMRRNGCEPDLVTYNVFLNYCCKELMLEEAEKLIEKM 141

Query: 523 QNRGLYPDELTFKLIIGGLIREKNFSLAYGVWDRMMEKGFTLDRDISETLINVINSKDAS 344
           +  GL PD  ++  ++ GL +      AY +    ME    +D     T+I  +   D +
Sbjct: 142 EGNGLEPDCYSYNQLLKGLCKANRLDKAYKLMTHKMEAKGLVDVVSYNTIIRALCKTDCN 201

Query: 343 RGSFS 329
           + +++
Sbjct: 202 KRAYN 206



 Score = 65.1 bits (157), Expect = 4e-08
 Identities = 35/106 (33%), Positives = 55/106 (51%)
 Frame = -3

Query: 712 DCVLYTVIIDHLCKIGSVEMARSIFHDMVEQGIAPDVVCYNALISGFCKAFRVSEAMHLY 533
           D V Y  II  LCK    + A ++F +M ++GI PDVV +  LI    K    S A  L+
Sbjct: 184 DVVSYNTIIRALCKTDCNKRAYNLFEEMEQKGIVPDVVTFTILIEASLKEGNSSVAKALF 243

Query: 532 EEMQNRGLYPDELTFKLIIGGLIREKNFSLAYGVWDRMMEKGFTLD 395
           ++M + G +PD + +  II  L +     +A  ++  M+E+G   D
Sbjct: 244 DQMISMGRFPDRILYTSIIDNLCKTGKIGMAQSIFHDMVEQGVGAD 289


>ref|XP_009796737.1| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
           mitochondrial isoform X1 [Nicotiana sylvestris]
          Length = 511

 Score =  196 bits (497), Expect = 2e-47
 Identities = 93/129 (72%), Positives = 111/129 (86%)
 Frame = -3

Query: 742 DQMINMGKSPDCVLYTVIIDHLCKIGSVEMARSIFHDMVEQGIAPDVVCYNALISGFCKA 563
           DQMI+MG+ PD +LYT IID+LCK G + MA+SIFHDMVEQG+  DV+ YNALISGFCKA
Sbjct: 383 DQMISMGRFPDRILYTSIIDNLCKTGKIGMAQSIFHDMVEQGVGADVISYNALISGFCKA 442

Query: 562 FRVSEAMHLYEEMQNRGLYPDELTFKLIIGGLIREKNFSLAYGVWDRMMEKGFTLDRDIS 383
            RV+EA+ LYE+MQ R L PDE+TFKLIIGGL++EKN S+A  VWD+MMEKGFTLDRD+S
Sbjct: 443 SRVNEALRLYEDMQARALDPDEITFKLIIGGLVQEKNLSVACAVWDQMMEKGFTLDRDLS 502

Query: 382 ETLINVINS 356
           +TLIN INS
Sbjct: 503 QTLINAINS 511



 Score = 78.6 bits (192), Expect = 4e-12
 Identities = 42/126 (33%), Positives = 71/126 (56%), Gaps = 1/126 (0%)
 Frame = -3

Query: 742 DQMINMGKSPDCVLYTVIIDHLCKIGSVEMARSIF-HDMVEQGIAPDVVCYNALISGFCK 566
           ++M   G  PDC  Y  ++  LCK   ++ A  +  H M  +G+  DVV YN +I   CK
Sbjct: 278 EKMEGNGLEPDCYSYNQLLKGLCKANRLDKAYKLMTHKMEAKGLV-DVVSYNTIIRALCK 336

Query: 565 AFRVSEAMHLYEEMQNRGLYPDELTFKLIIGGLIREKNFSLAYGVWDRMMEKGFTLDRDI 386
                 A +L+EEM+ +G+ PD +TF ++I   ++E N S+A  ++D+M+  G   DR +
Sbjct: 337 TDCNKRAYNLFEEMEQKGIVPDVVTFTILIEASLKEGNSSVAKALFDQMISMGRFPDRIL 396

Query: 385 SETLIN 368
             ++I+
Sbjct: 397 YTSIID 402



 Score = 68.2 bits (165), Expect = 5e-09
 Identities = 37/123 (30%), Positives = 61/123 (49%)
 Frame = -3

Query: 739 QMINMGKSPDCVLYTVIIDHLCKIGSVEMARSIFHDMVEQGIAPDVVCYNALISGFCKAF 560
           +M  MG S + + Y+  I  LCK+ + ++   + +DM   GI PD   YN  ++  C   
Sbjct: 69  EMKPMGFSLNSLTYSRFICGLCKVKNFDLIHRLLNDMDMLGIVPDFWAYNTYLNLLCSEH 128

Query: 559 RVSEAMHLYEEMQNRGLYPDELTFKLIIGGLIREKNFSLAYGVWDRMMEKGFTLDRDISE 380
            V  A+ L+  M  +G  PD +++ ++I GL R   F  A  +W  M+ KG   D    +
Sbjct: 129 LVEIALELFRVMGAKGKEPDVVSYTILISGLCRIGRFDNAVEMWHAMIRKGLIPDNKACK 188

Query: 379 TLI 371
            L+
Sbjct: 189 ALV 191



 Score = 65.5 bits (158), Expect = 3e-08
 Identities = 35/125 (28%), Positives = 61/125 (48%)
 Frame = -3

Query: 703 LYTVIIDHLCKIGSVEMARSIFHDMVEQGIAPDVVCYNALISGFCKAFRVSEAMHLYEEM 524
           +Y V+I   C  G ++ A++I   M   G  PD+V YN  ++  CK   + EA  L E+M
Sbjct: 221 IYNVLIHGFCGAGRIDKAQAIKTFMRRNGCEPDLVTYNVFLNYCCKELMLEEAEKLIEKM 280

Query: 523 QNRGLYPDELTFKLIIGGLIREKNFSLAYGVWDRMMEKGFTLDRDISETLINVINSKDAS 344
           +  GL PD  ++  ++ GL +      AY +    ME    +D     T+I  +   D +
Sbjct: 281 EGNGLEPDCYSYNQLLKGLCKANRLDKAYKLMTHKMEAKGLVDVVSYNTIIRALCKTDCN 340

Query: 343 RGSFS 329
           + +++
Sbjct: 341 KRAYN 345



 Score = 65.1 bits (157), Expect = 4e-08
 Identities = 35/106 (33%), Positives = 55/106 (51%)
 Frame = -3

Query: 712 DCVLYTVIIDHLCKIGSVEMARSIFHDMVEQGIAPDVVCYNALISGFCKAFRVSEAMHLY 533
           D V Y  II  LCK    + A ++F +M ++GI PDVV +  LI    K    S A  L+
Sbjct: 323 DVVSYNTIIRALCKTDCNKRAYNLFEEMEQKGIVPDVVTFTILIEASLKEGNSSVAKALF 382

Query: 532 EEMQNRGLYPDELTFKLIIGGLIREKNFSLAYGVWDRMMEKGFTLD 395
           ++M + G +PD + +  II  L +     +A  ++  M+E+G   D
Sbjct: 383 DQMISMGRFPDRILYTSIIDNLCKTGKIGMAQSIFHDMVEQGVGAD 428



 Score = 64.3 bits (155), Expect = 7e-08
 Identities = 39/125 (31%), Positives = 59/125 (47%)
 Frame = -3

Query: 742 DQMINMGKSPDCVLYTVIIDHLCKIGSVEMARSIFHDMVEQGIAPDVVCYNALISGFCKA 563
           + M  +G  PD   Y   ++ LC    VE+A  +F  M  +G  PDVV Y  LISG C+ 
Sbjct: 103 NDMDMLGIVPDFWAYNTYLNLLCSEHLVEIALELFRVMGAKGKEPDVVSYTILISGLCRI 162

Query: 562 FRVSEAMHLYEEMQNRGLYPDELTFKLIIGGLIREKNFSLAYGVWDRMMEKGFTLDRDIS 383
            R   A+ ++  M  +GL PD    K ++ GL       LAY +   ++      + +I 
Sbjct: 163 GRFDNAVEMWHAMIRKGLIPDNKACKALVFGLCGSGKVDLAYELTLGILRGQVKFNTEIY 222

Query: 382 ETLIN 368
             LI+
Sbjct: 223 NVLIH 227


>ref|XP_010100361.1| hypothetical protein L484_027670 [Morus notabilis]
           gi|587893963|gb|EXB82495.1| hypothetical protein
           L484_027670 [Morus notabilis]
          Length = 513

 Score =  195 bits (496), Expect = 2e-47
 Identities = 92/131 (70%), Positives = 107/131 (81%)
 Frame = -3

Query: 742 DQMINMGKSPDCVLYTVIIDHLCKIGSVEMARSIFHDMVEQGIAPDVVCYNALISGFCKA 563
           DQM  MG  PDC+ YT+I+DHLCK G + MA S+F DMVE+GI PDV+ YNA+I+G CKA
Sbjct: 383 DQMTGMGLLPDCLFYTIIVDHLCKAGKIGMAHSVFSDMVERGITPDVISYNAIINGLCKA 442

Query: 562 FRVSEAMHLYEEMQNRGLYPDELTFKLIIGGLIREKNFSLAYGVWDRMMEKGFTLDRDIS 383
           FRVSEA+HLYEEMQ RGL PDE+TFKLIIGGLI+E    LA  VWD+MMEKGFTL+  +S
Sbjct: 443 FRVSEAVHLYEEMQARGLCPDEVTFKLIIGGLIKENKLPLACRVWDQMMEKGFTLEPALS 502

Query: 382 ETLINVINSKD 350
           ETLIN INSKD
Sbjct: 503 ETLINAINSKD 513



 Score = 67.4 bits (163), Expect = 9e-09
 Identities = 36/114 (31%), Positives = 57/114 (50%)
 Frame = -3

Query: 736 MINMGKSPDCVLYTVIIDHLCKIGSVEMARSIFHDMVEQGIAPDVVCYNALISGFCKAFR 557
           M  +G  PD   Y  ++  LC+    + A  +  D +E     +VV YN +I  FCK  R
Sbjct: 280 MERIGMKPDSYSYNKLLKGLCRAHRPDKAYLLMVDSMESKGLANVVSYNTIIGAFCKLLR 339

Query: 556 VSEAMHLYEEMQNRGLYPDELTFKLIIGGLIREKNFSLAYGVWDRMMEKGFTLD 395
           V  A  L+EEM+ +G+ PD +TF ++I   +   +  +A  + D+M   G   D
Sbjct: 340 VRRAYQLFEEMRQKGIEPDVVTFTILIKAFLSVGSSDVAKRLLDQMTGMGLLPD 393



 Score = 65.5 bits (158), Expect = 3e-08
 Identities = 34/102 (33%), Positives = 52/102 (50%)
 Frame = -3

Query: 742 DQMINMGKSPDCVLYTVIIDHLCKIGSVEMARSIFHDMVEQGIAPDVVCYNALISGFCKA 563
           + M  +G  PD   + + ++ LC    V++A  +F  MVE+G  PDVV Y  LI G CKA
Sbjct: 103 EDMDKLGCIPDIWAFNIYLNVLCGEHRVQLALEVFRRMVERGREPDVVTYTILIDGLCKA 162

Query: 562 FRVSEAMHLYEEMQNRGLYPDELTFKLIIGGLIREKNFSLAY 437
           ++   A+  +  M  +G  PD +    ++ GL       LAY
Sbjct: 163 WKFDAAVEAWCGMIKKGFVPDTIACTALVVGLCEGGKVDLAY 204



 Score = 64.3 bits (155), Expect = 7e-08
 Identities = 31/102 (30%), Positives = 51/102 (50%)
 Frame = -3

Query: 700 YTVIIDHLCKIGSVEMARSIFHDMVEQGIAPDVVCYNALISGFCKAFRVSEAMHLYEEMQ 521
           Y+  I  LC + +  +   +  DM + G  PD+  +N  ++  C   RV  A+ ++  M 
Sbjct: 82  YSRFISALCAVKNFLLVEKLLEDMDKLGCIPDIWAFNIYLNVLCGEHRVQLALEVFRRMV 141

Query: 520 NRGLYPDELTFKLIIGGLIREKNFSLAYGVWDRMMEKGFTLD 395
            RG  PD +T+ ++I GL +   F  A   W  M++KGF  D
Sbjct: 142 ERGREPDVVTYTILIDGLCKAWKFDAAVEAWCGMIKKGFVPD 183



 Score = 60.1 bits (144), Expect = 1e-06
 Identities = 33/123 (26%), Positives = 56/123 (45%), Gaps = 35/123 (28%)
 Frame = -3

Query: 739 QMINMGKSPDCVLYTVIIDHLCKIGSVEMARSIFHDMVEQGIAPDVVC------------ 596
           +M+  G+ PD V YT++ID LCK    + A   +  M+++G  PD +             
Sbjct: 139 RMVERGREPDVVTYTILIDGLCKAWKFDAAVEAWCGMIKKGFVPDTIACTALVVGLCEGG 198

Query: 595 -----------------------YNALISGFCKAFRVSEAMHLYEEMQNRGLYPDELTFK 485
                                  YN+LISGFC+A R+ +A  + + M+  G  PD +T+ 
Sbjct: 199 KVDLAYELTVGALKGRVKFNNLIYNSLISGFCRAGRIDKAQVIKDFMKRDGCEPDLVTYN 258

Query: 484 LII 476
           +++
Sbjct: 259 VLL 261



 Score = 58.2 bits (139), Expect = 5e-06
 Identities = 34/117 (29%), Positives = 60/117 (51%), Gaps = 1/117 (0%)
 Frame = -3

Query: 742 DQMINMGKSPDCVLYTVIIDHLCKIGSVEMARSIFHDMVEQGIAPDVVCYNALISGFCKA 563
           D M   G  PD V Y V++ + C    ++ A  + + M   G+ PD   YN L+ G C+A
Sbjct: 243 DFMKRDGCEPDLVTYNVLLIYCCDKLMLDEANKLINTMERIGMKPDSYSYNKLLKGLCRA 302

Query: 562 FRVSEA-MHLYEEMQNRGLYPDELTFKLIIGGLIREKNFSLAYGVWDRMMEKGFTLD 395
            R  +A + + + M+++GL  + +++  IIG   +      AY +++ M +KG   D
Sbjct: 303 HRPDKAYLLMVDSMESKGL-ANVVSYNTIIGAFCKLLRVRRAYQLFEEMRQKGIEPD 358


>ref|XP_002530052.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223530468|gb|EEF32352.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 554

 Score =  194 bits (492), Expect = 6e-47
 Identities = 96/136 (70%), Positives = 109/136 (80%), Gaps = 2/136 (1%)
 Frame = -3

Query: 742 DQMINMGKSPDCVLYTVIIDHLCKIGSVEMARSIFHDMVEQGIAPDVVCYNALISGFCKA 563
           DQM  MG SPDC+ YT IIDHLCK G VEMA SIF DMVEQGI+PDV+ +NALI+GFCK 
Sbjct: 384 DQMTEMGLSPDCIFYTTIIDHLCKSGKVEMAHSIFCDMVEQGISPDVISFNALINGFCKC 443

Query: 562 FRVSEAMHLYEEMQNRGLYPDELTFKLIIGGLIREKNFSLAYGVWDRMMEKGFTLDRDIS 383
            RVSEAMHLYEEMQNRG YPDE+T+KLIIGGLI EK  S+A  VW +MM+KGFTLDR I+
Sbjct: 444 SRVSEAMHLYEEMQNRGSYPDEVTYKLIIGGLIEEKKISIACMVWGQMMDKGFTLDRAIA 503

Query: 382 ETLI--NVINSKDASR 341
           +TLI  N I +   SR
Sbjct: 504 QTLIRGNSIENASTSR 519



 Score = 61.6 bits (148), Expect = 5e-07
 Identities = 34/115 (29%), Positives = 54/115 (46%)
 Frame = -3

Query: 739 QMINMGKSPDCVLYTVIIDHLCKIGSVEMARSIFHDMVEQGIAPDVVCYNALISGFCKAF 560
           QM   G S     Y+  I  LCK+ +      + HDM      PD+  +N  +       
Sbjct: 69  QMGTRGFSLSSFTYSRFITGLCKVKNFTFIDELLHDMETLNCLPDIWAFNIYLHLLFVEG 128

Query: 559 RVSEAMHLYEEMQNRGLYPDELTFKLIIGGLIREKNFSLAYGVWDRMMEKGFTLD 395
           R+  A+ ++E++   G  PD +T+ +II G+ + K F  A   W  M+ KGF+ D
Sbjct: 129 RIDLALEVFEKIVKNGRKPDVVTYTIIIHGVCKIKKFDTAIQFWRDMIHKGFSPD 183



 Score = 61.2 bits (147), Expect = 6e-07
 Identities = 34/125 (27%), Positives = 56/125 (44%), Gaps = 36/125 (28%)
 Frame = -3

Query: 742 DQMINMGKSPDCVLYTVIIDHLCKIGSVEMARSIFHDMVEQGIAPD-------------- 605
           ++++  G+ PD V YT+II  +CKI   + A   + DM+ +G +PD              
Sbjct: 138 EKIVKNGRKPDVVTYTIIIHGVCKIKKFDTAIQFWRDMIHKGFSPDNKACGAIVVGLCDG 197

Query: 604 ----------------------VVCYNALISGFCKAFRVSEAMHLYEEMQNRGLYPDELT 491
                                  + YNALISGFC+A R+ +A  +   M+  G  PD +T
Sbjct: 198 RKVDLAYELIIDVMKSGRVKLSTLVYNALISGFCRAGRIDKAQAIKSFMRRNGCEPDLVT 257

Query: 490 FKLII 476
           + + +
Sbjct: 258 YNVFL 262



 Score = 57.4 bits (137), Expect = 9e-06
 Identities = 30/103 (29%), Positives = 51/103 (49%)
 Frame = -3

Query: 715 PDCVLYTVIIDHLCKIGSVEMARSIFHDMVEQGIAPDVVCYNALISGFCKAFRVSEAMHL 536
           PD   + + +  L   G +++A  +F  +V+ G  PDVV Y  +I G CK  +   A+  
Sbjct: 112 PDIWAFNIYLHLLFVEGRIDLALEVFEKIVKNGRKPDVVTYTIIIHGVCKIKKFDTAIQF 171

Query: 535 YEEMQNRGLYPDELTFKLIIGGLIREKNFSLAYGVWDRMMEKG 407
           + +M ++G  PD      I+ GL   +   LAY +   +M+ G
Sbjct: 172 WRDMIHKGFSPDNKACGAIVVGLCDGRKVDLAYELIIDVMKSG 214


>ref|XP_010683589.1| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
           mitochondrial [Beta vulgaris subsp. vulgaris]
           gi|870854879|gb|KMT06627.1| hypothetical protein
           BVRB_7g157950 [Beta vulgaris subsp. vulgaris]
          Length = 517

 Score =  192 bits (487), Expect = 2e-46
 Identities = 91/133 (68%), Positives = 108/133 (81%)
 Frame = -3

Query: 742 DQMINMGKSPDCVLYTVIIDHLCKIGSVEMARSIFHDMVEQGIAPDVVCYNALISGFCKA 563
           DQM  MG  PDCVLYT+IIDHLCK G+++MA+S+F DM+E G APDV+ YNALISG CKA
Sbjct: 385 DQMTGMGIFPDCVLYTIIIDHLCKTGNIDMAQSVFSDMIENGTAPDVISYNALISGLCKA 444

Query: 562 FRVSEAMHLYEEMQNRGLYPDELTFKLIIGGLIREKNFSLAYGVWDRMMEKGFTLDRDIS 383
            R++EAM L   MQNRGL PDE+TFKLIIGGLIRE   S+A  +WD+MMEKG+TLDR IS
Sbjct: 445 SRINEAMSLNTNMQNRGLCPDEVTFKLIIGGLIRENQISVACTLWDQMMEKGYTLDRSIS 504

Query: 382 ETLINVINSKDAS 344
           E LIN ++SKD S
Sbjct: 505 ERLINALHSKDTS 517



 Score = 73.2 bits (178), Expect = 2e-10
 Identities = 41/149 (27%), Positives = 69/149 (46%), Gaps = 35/149 (23%)
 Frame = -3

Query: 736 MINMGKSPDCVLYTVIIDHLCKIGSVEMARSIFHDMVEQGIAPD---------------- 605
           M+  G+ PD V YTV++  LCK+G  E A  I+H M++ G  PD                
Sbjct: 143 MMQKGRQPDVVTYTVLLSGLCKVGRYENAVEIWHSMIKNGFKPDDKACRALVLGLCGGGK 202

Query: 604 -------------------VVCYNALISGFCKAFRVSEAMHLYEEMQNRGLYPDELTFKL 482
                              ++ YN+LISG+CKA ++++A+ + + M+  G  PD +T+ +
Sbjct: 203 VDLAYELIVDMMKCEVPIGILVYNSLISGYCKAGQINKALTIKKYMKRNGCEPDRVTYNI 262

Query: 481 IIGGLIREKNFSLAYGVWDRMMEKGFTLD 395
           I+G    +     A  + ++M   G   D
Sbjct: 263 ILGFCCEQLMLVEAEKLMEKMEMNGLAPD 291



 Score = 68.9 bits (167), Expect = 3e-09
 Identities = 35/108 (32%), Positives = 55/108 (50%)
 Frame = -3

Query: 736 MINMGKSPDCVLYTVIIDHLCKIGSVEMARSIFHDMVEQGIAPDVVCYNALISGFCKAFR 557
           M  +G  PD   Y + +  LC+    ++A S+  DM+++G  PDVV Y  L+SG CK  R
Sbjct: 108 MEKLGSVPDIWAYNIYLHLLCQENQTDVALSLLQDMMQKGRQPDVVTYTVLLSGLCKVGR 167

Query: 556 VSEAMHLYEEMQNRGLYPDELTFKLIIGGLIREKNFSLAYGVWDRMME 413
              A+ ++  M   G  PD+   + ++ GL       LAY +   MM+
Sbjct: 168 YENAVEIWHSMIKNGFKPDDKACRALVLGLCGGGKVDLAYELIVDMMK 215



 Score = 65.9 bits (159), Expect = 2e-08
 Identities = 33/122 (27%), Positives = 60/122 (49%)
 Frame = -3

Query: 736 MINMGKSPDCVLYTVIIDHLCKIGSVEMARSIFHDMVEQGIAPDVVCYNALISGFCKAFR 557
           MI  G S     Y+  I  LC++ + ++  S+  DM + G  PD+  YN  +   C+  +
Sbjct: 73  MIPQGFSLISFTYSRFICALCEVKNFQLIESLLKDMEKLGSVPDIWAYNIYLHLLCQENQ 132

Query: 556 VSEAMHLYEEMQNRGLYPDELTFKLIIGGLIREKNFSLAYGVWDRMMEKGFTLDRDISET 377
              A+ L ++M  +G  PD +T+ +++ GL +   +  A  +W  M++ GF  D      
Sbjct: 133 TDVALSLLQDMMQKGRQPDVVTYTVLLSGLCKVGRYENAVEIWHSMIKNGFKPDDKACRA 192

Query: 376 LI 371
           L+
Sbjct: 193 LV 194



 Score = 62.4 bits (150), Expect = 3e-07
 Identities = 34/106 (32%), Positives = 55/106 (51%)
 Frame = -3

Query: 724 GKSPDCVLYTVIIDHLCKIGSVEMARSIFHDMVEQGIAPDVVCYNALISGFCKAFRVSEA 545
           G  PD V Y +I+   C+   +  A  +   M   G+APD+  YN  + G CKA R+ +A
Sbjct: 252 GCEPDRVTYNIILGFCCEQLMLVEAEKLMEKMEMNGLAPDIYSYNQFLKGLCKANRLDKA 311

Query: 544 MHLYEEMQNRGLYPDELTFKLIIGGLIREKNFSLAYGVWDRMMEKG 407
             L + M+ +GL  D +++  I+ GL    +   AY +++ M  KG
Sbjct: 312 YLLLDVMEVKGLC-DVVSYNTILRGLCSGHHTKRAYKLFEEMFRKG 356



 Score = 60.8 bits (146), Expect = 8e-07
 Identities = 34/116 (29%), Positives = 57/116 (49%)
 Frame = -3

Query: 742 DQMINMGKSPDCVLYTVIIDHLCKIGSVEMARSIFHDMVEQGIAPDVVCYNALISGFCKA 563
           ++M   G +PD   Y   +  LCK   ++ A  +   M  +G+  DVV YN ++ G C  
Sbjct: 281 EKMEMNGLAPDIYSYNQFLKGLCKANRLDKAYLLLDVMEVKGLC-DVVSYNTILRGLCSG 339

Query: 562 FRVSEAMHLYEEMQNRGLYPDELTFKLIIGGLIREKNFSLAYGVWDRMMEKGFTLD 395
                A  L+EEM  +G+ P+ +TF ++I   + E +  +A  + D+M   G   D
Sbjct: 340 HHTKRAYKLFEEMFRKGIIPNTMTFTILIKAFLGEGSSYVAKKLLDQMTGMGIFPD 395


>ref|XP_011086684.1| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
           mitochondrial isoform X2 [Sesamum indicum]
          Length = 517

 Score =  191 bits (486), Expect = 3e-46
 Identities = 92/131 (70%), Positives = 105/131 (80%)
 Frame = -3

Query: 742 DQMINMGKSPDCVLYTVIIDHLCKIGSVEMARSIFHDMVEQGIAPDVVCYNALISGFCKA 563
           DQM  M   P   LYT I+DHLCK G + MA SIFHDMVEQGI PDVV YNALI+G+CKA
Sbjct: 383 DQMTRMSLFPSLALYTSIVDHLCKTGRISMAHSIFHDMVEQGIGPDVVSYNALINGYCKA 442

Query: 562 FRVSEAMHLYEEMQNRGLYPDELTFKLIIGGLIREKNFSLAYGVWDRMMEKGFTLDRDIS 383
           F+VSEA+HL+EEMQ R +YPDE+TFKLI+ GLI+EK  SLA GVWD+MMEKGFTLD   S
Sbjct: 443 FKVSEALHLFEEMQTRRVYPDEVTFKLIVRGLIKEKKLSLACGVWDQMMEKGFTLDSYSS 502

Query: 382 ETLINVINSKD 350
           ETLIN IN K+
Sbjct: 503 ETLINAINLKE 513



 Score = 67.8 bits (164), Expect = 7e-09
 Identities = 40/126 (31%), Positives = 67/126 (53%), Gaps = 1/126 (0%)
 Frame = -3

Query: 706 VLYTVIIDHLCKIGSVEMARSIFHDMVEQGIAPDVVCYNALISGFCKAFRVSEAMHLYEE 527
           V+Y V+I   C+IG ++ A +I + M   G  PD++ +N L++  C A  + EA  L ++
Sbjct: 220 VIYNVLIHGFCRIGRIDKALAIKNFMRRNGCEPDLITHNVLLNYCCNALMLDEAEKLMDK 279

Query: 526 MQNRGLYPDELTFKLIIGGLIREKNFSLAYGVWDRMME-KGFTLDRDISETLINVINSKD 350
           M+  G+ PD  ++  ++ GL R K    AY +    ME KGF +D     T+I  +    
Sbjct: 280 MERSGVRPDSYSYNELLKGLCRAKRVDNAYVLLVNKMEAKGF-VDVVSYNTIIKALCKAG 338

Query: 349 ASRGSF 332
            SR ++
Sbjct: 339 RSRRAY 344



 Score = 67.4 bits (163), Expect = 9e-09
 Identities = 37/124 (29%), Positives = 60/124 (48%)
 Frame = -3

Query: 742 DQMINMGKSPDCVLYTVIIDHLCKIGSVEMARSIFHDMVEQGIAPDVVCYNALISGFCKA 563
           D M   G S +   Y+  I  LC++ + E+   +F DM   GI PD+  +N  ++  C  
Sbjct: 68  DSMNPRGFSLNSFTYSRFISGLCEVKNFELIFRLFDDMDRLGIVPDIWAFNIYMNLLCGV 127

Query: 562 FRVSEAMHLYEEMQNRGLYPDELTFKLIIGGLIREKNFSLAYGVWDRMMEKGFTLDRDIS 383
             V EA+ +   M+  G  PD +++ +II GL R K    A  +W  M+++G   D    
Sbjct: 128 NLVDEALKVLRLMREEGREPDVVSYTIIISGLFRVKRHDEAVQIWKIMIKEGINPDSKAC 187

Query: 382 ETLI 371
             L+
Sbjct: 188 RALV 191



 Score = 66.2 bits (160), Expect = 2e-08
 Identities = 37/108 (34%), Positives = 56/108 (51%)
 Frame = -3

Query: 742 DQMINMGKSPDCVLYTVIIDHLCKIGSVEMARSIFHDMVEQGIAPDVVCYNALISGFCKA 563
           D+M   G  PD   Y  ++  LC+   V+ A  +  + +E     DVV YN +I   CKA
Sbjct: 278 DKMERSGVRPDSYSYNELLKGLCRAKRVDNAYVLLVNKMEAKGFVDVVSYNTIIKALCKA 337

Query: 562 FRVSEAMHLYEEMQNRGLYPDELTFKLIIGGLIREKNFSLAYGVWDRM 419
            R   A  L  EM  +G+ PD +TF ++I   ++E N  +A G+ D+M
Sbjct: 338 GRSRRAYKLLGEMGRKGIAPDLVTFTILIDAFLKEGNSIVAKGLLDQM 385



 Score = 58.2 bits (139), Expect = 5e-06
 Identities = 32/102 (31%), Positives = 51/102 (50%)
 Frame = -3

Query: 742 DQMINMGKSPDCVLYTVIIDHLCKIGSVEMARSIFHDMVEQGIAPDVVCYNALISGFCKA 563
           D M  +G  PD   + + ++ LC +  V+ A  +   M E+G  PDVV Y  +ISG  + 
Sbjct: 103 DDMDRLGIVPDIWAFNIYMNLLCGVNLVDEALKVLRLMREEGREPDVVSYTIIISGLFRV 162

Query: 562 FRVSEAMHLYEEMQNRGLYPDELTFKLIIGGLIREKNFSLAY 437
            R  EA+ +++ M   G+ PD    + ++ GL       LAY
Sbjct: 163 KRHDEAVQIWKIMIKEGINPDSKACRALVLGLCDIGKVDLAY 204


>ref|XP_011086681.1| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
           mitochondrial isoform X1 [Sesamum indicum]
           gi|747079000|ref|XP_011086682.1| PREDICTED:
           pentatricopeptide repeat-containing protein At1g13040,
           mitochondrial isoform X1 [Sesamum indicum]
           gi|747079002|ref|XP_011086683.1| PREDICTED:
           pentatricopeptide repeat-containing protein At1g13040,
           mitochondrial isoform X1 [Sesamum indicum]
          Length = 522

 Score =  191 bits (486), Expect = 3e-46
 Identities = 92/131 (70%), Positives = 105/131 (80%)
 Frame = -3

Query: 742 DQMINMGKSPDCVLYTVIIDHLCKIGSVEMARSIFHDMVEQGIAPDVVCYNALISGFCKA 563
           DQM  M   P   LYT I+DHLCK G + MA SIFHDMVEQGI PDVV YNALI+G+CKA
Sbjct: 383 DQMTRMSLFPSLALYTSIVDHLCKTGRISMAHSIFHDMVEQGIGPDVVSYNALINGYCKA 442

Query: 562 FRVSEAMHLYEEMQNRGLYPDELTFKLIIGGLIREKNFSLAYGVWDRMMEKGFTLDRDIS 383
           F+VSEA+HL+EEMQ R +YPDE+TFKLI+ GLI+EK  SLA GVWD+MMEKGFTLD   S
Sbjct: 443 FKVSEALHLFEEMQTRRVYPDEVTFKLIVRGLIKEKKLSLACGVWDQMMEKGFTLDSYSS 502

Query: 382 ETLINVINSKD 350
           ETLIN IN K+
Sbjct: 503 ETLINAINLKE 513



 Score = 67.8 bits (164), Expect = 7e-09
 Identities = 40/126 (31%), Positives = 67/126 (53%), Gaps = 1/126 (0%)
 Frame = -3

Query: 706 VLYTVIIDHLCKIGSVEMARSIFHDMVEQGIAPDVVCYNALISGFCKAFRVSEAMHLYEE 527
           V+Y V+I   C+IG ++ A +I + M   G  PD++ +N L++  C A  + EA  L ++
Sbjct: 220 VIYNVLIHGFCRIGRIDKALAIKNFMRRNGCEPDLITHNVLLNYCCNALMLDEAEKLMDK 279

Query: 526 MQNRGLYPDELTFKLIIGGLIREKNFSLAYGVWDRMME-KGFTLDRDISETLINVINSKD 350
           M+  G+ PD  ++  ++ GL R K    AY +    ME KGF +D     T+I  +    
Sbjct: 280 MERSGVRPDSYSYNELLKGLCRAKRVDNAYVLLVNKMEAKGF-VDVVSYNTIIKALCKAG 338

Query: 349 ASRGSF 332
            SR ++
Sbjct: 339 RSRRAY 344



 Score = 67.4 bits (163), Expect = 9e-09
 Identities = 37/124 (29%), Positives = 60/124 (48%)
 Frame = -3

Query: 742 DQMINMGKSPDCVLYTVIIDHLCKIGSVEMARSIFHDMVEQGIAPDVVCYNALISGFCKA 563
           D M   G S +   Y+  I  LC++ + E+   +F DM   GI PD+  +N  ++  C  
Sbjct: 68  DSMNPRGFSLNSFTYSRFISGLCEVKNFELIFRLFDDMDRLGIVPDIWAFNIYMNLLCGV 127

Query: 562 FRVSEAMHLYEEMQNRGLYPDELTFKLIIGGLIREKNFSLAYGVWDRMMEKGFTLDRDIS 383
             V EA+ +   M+  G  PD +++ +II GL R K    A  +W  M+++G   D    
Sbjct: 128 NLVDEALKVLRLMREEGREPDVVSYTIIISGLFRVKRHDEAVQIWKIMIKEGINPDSKAC 187

Query: 382 ETLI 371
             L+
Sbjct: 188 RALV 191



 Score = 66.2 bits (160), Expect = 2e-08
 Identities = 37/108 (34%), Positives = 56/108 (51%)
 Frame = -3

Query: 742 DQMINMGKSPDCVLYTVIIDHLCKIGSVEMARSIFHDMVEQGIAPDVVCYNALISGFCKA 563
           D+M   G  PD   Y  ++  LC+   V+ A  +  + +E     DVV YN +I   CKA
Sbjct: 278 DKMERSGVRPDSYSYNELLKGLCRAKRVDNAYVLLVNKMEAKGFVDVVSYNTIIKALCKA 337

Query: 562 FRVSEAMHLYEEMQNRGLYPDELTFKLIIGGLIREKNFSLAYGVWDRM 419
            R   A  L  EM  +G+ PD +TF ++I   ++E N  +A G+ D+M
Sbjct: 338 GRSRRAYKLLGEMGRKGIAPDLVTFTILIDAFLKEGNSIVAKGLLDQM 385



 Score = 58.2 bits (139), Expect = 5e-06
 Identities = 32/102 (31%), Positives = 51/102 (50%)
 Frame = -3

Query: 742 DQMINMGKSPDCVLYTVIIDHLCKIGSVEMARSIFHDMVEQGIAPDVVCYNALISGFCKA 563
           D M  +G  PD   + + ++ LC +  V+ A  +   M E+G  PDVV Y  +ISG  + 
Sbjct: 103 DDMDRLGIVPDIWAFNIYMNLLCGVNLVDEALKVLRLMREEGREPDVVSYTIIISGLFRV 162

Query: 562 FRVSEAMHLYEEMQNRGLYPDELTFKLIIGGLIREKNFSLAY 437
            R  EA+ +++ M   G+ PD    + ++ GL       LAY
Sbjct: 163 KRHDEAVQIWKIMIKEGINPDSKACRALVLGLCDIGKVDLAY 204


>ref|XP_007044848.1| Pentatricopeptide repeat superfamily protein isoform 1 [Theobroma
           cacao] gi|590695292|ref|XP_007044849.1|
           Pentatricopeptide repeat superfamily protein isoform 1
           [Theobroma cacao] gi|590695295|ref|XP_007044850.1|
           Pentatricopeptide repeat superfamily protein isoform 1
           [Theobroma cacao] gi|590695299|ref|XP_007044851.1|
           Pentatricopeptide repeat superfamily protein isoform 1
           [Theobroma cacao] gi|508708783|gb|EOY00680.1|
           Pentatricopeptide repeat superfamily protein isoform 1
           [Theobroma cacao] gi|508708784|gb|EOY00681.1|
           Pentatricopeptide repeat superfamily protein isoform 1
           [Theobroma cacao] gi|508708785|gb|EOY00682.1|
           Pentatricopeptide repeat superfamily protein isoform 1
           [Theobroma cacao] gi|508708786|gb|EOY00683.1|
           Pentatricopeptide repeat superfamily protein isoform 1
           [Theobroma cacao]
          Length = 516

 Score =  191 bits (485), Expect = 4e-46
 Identities = 92/132 (69%), Positives = 106/132 (80%)
 Frame = -3

Query: 742 DQMINMGKSPDCVLYTVIIDHLCKIGSVEMARSIFHDMVEQGIAPDVVCYNALISGFCKA 563
           D+M  MG  PDC+ YT IIDHLCK G VEMA S+F DM++QG+ PDVV YNALI+GFCK+
Sbjct: 384 DRMSGMGLLPDCIFYTAIIDHLCKNGKVEMAHSVFDDMIKQGVNPDVVSYNALINGFCKS 443

Query: 562 FRVSEAMHLYEEMQNRGLYPDELTFKLIIGGLIREKNFSLAYGVWDRMMEKGFTLDRDIS 383
            R SEA+HLYEEMQ RG  PDE+TFKLIIGGLIREK  S A  VWD+MMEKGFTLD  +S
Sbjct: 444 NRASEAIHLYEEMQTRGFSPDEVTFKLIIGGLIREKKLSKACKVWDQMMEKGFTLDGAVS 503

Query: 382 ETLINVINSKDA 347
           ETLIN I+S D+
Sbjct: 504 ETLINAIHSVDS 515



 Score = 67.8 bits (164), Expect = 7e-09
 Identities = 38/129 (29%), Positives = 64/129 (49%)
 Frame = -3

Query: 742 DQMINMGKSPDCVLYTVIIDHLCKIGSVEMARSIFHDMVEQGIAPDVVCYNALISGFCKA 563
           + M  +   PD   + + ++ LC+   +E+A  +FH +V++G  PDVV Y  +I G CKA
Sbjct: 103 NDMDKLNYVPDIWAFNIYLNLLCREKKIELALEVFHSLVKKGRDPDVVTYTIMIDGLCKA 162

Query: 562 FRVSEAMHLYEEMQNRGLYPDELTFKLIIGGLIREKNFSLAYGVWDRMMEKGFTLDRDIS 383
            +   A+  + EM  +G  PD      ++ GL       LAY +   +++ G   D + S
Sbjct: 163 GKFDNAVGFWREMVGKGFRPDNKACCALVVGLCDGGKVDLAYELVVEVIKGG---DIEFS 219

Query: 382 ETLINVINS 356
             L N + S
Sbjct: 220 TLLYNALIS 228



 Score = 63.5 bits (153), Expect = 1e-07
 Identities = 42/149 (28%), Positives = 60/149 (40%), Gaps = 35/149 (23%)
 Frame = -3

Query: 736 MINMGKSPDCVLYTVIIDHLCKIGSVEMARSIFHDMVEQGIAPDVVCYNALISGFCKAFR 557
           M   G  PD V Y V++++ C    +E A  +   M   GI PDV  YN +I GFC A R
Sbjct: 246 MTKNGCEPDLVTYNVLLNYCCNELMLEEAAKLVKKMERSGIGPDVYGYNQMIKGFCNANR 305

Query: 556 -----------------------------------VSEAMHLYEEMQNRGLYPDELTFKL 482
                                              + +A  L+EEM  +G+ PD +TF  
Sbjct: 306 PDKALLLMVNKMEANGLADAVSHNTIIKAFCKGGHIGKAYKLFEEMGRKGIAPDVVTFTT 365

Query: 481 IIGGLIREKNFSLAYGVWDRMMEKGFTLD 395
           +I   + E +  +A  + DRM   G   D
Sbjct: 366 LIKACLTEGSSDIAKALLDRMSGMGLLPD 394



 Score = 62.0 bits (149), Expect = 4e-07
 Identities = 31/115 (26%), Positives = 55/115 (47%)
 Frame = -3

Query: 739 QMINMGKSPDCVLYTVIIDHLCKIGSVEMARSIFHDMVEQGIAPDVVCYNALISGFCKAF 560
           QM   G S     Y+  I  LC + +      + +DM +    PD+  +N  ++  C+  
Sbjct: 69  QMFPQGFSLTPFTYSRFISALCPVKNFNFIELLLNDMDKLNYVPDIWAFNIYLNLLCREK 128

Query: 559 RVSEAMHLYEEMQNRGLYPDELTFKLIIGGLIREKNFSLAYGVWDRMMEKGFTLD 395
           ++  A+ ++  +  +G  PD +T+ ++I GL +   F  A G W  M+ KGF  D
Sbjct: 129 KIELALEVFHSLVKKGRDPDVVTYTIMIDGLCKAGKFDNAVGFWREMVGKGFRPD 183


>ref|XP_004240634.1| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
           mitochondrial [Solanum lycopersicum]
           gi|723704161|ref|XP_010321814.1| PREDICTED:
           pentatricopeptide repeat-containing protein At1g13040,
           mitochondrial [Solanum lycopersicum]
           gi|723704163|ref|XP_010321815.1| PREDICTED:
           pentatricopeptide repeat-containing protein At1g13040,
           mitochondrial [Solanum lycopersicum]
           gi|723704166|ref|XP_010321816.1| PREDICTED:
           pentatricopeptide repeat-containing protein At1g13040,
           mitochondrial [Solanum lycopersicum]
          Length = 511

 Score =  190 bits (483), Expect = 7e-46
 Identities = 92/128 (71%), Positives = 108/128 (84%)
 Frame = -3

Query: 742 DQMINMGKSPDCVLYTVIIDHLCKIGSVEMARSIFHDMVEQGIAPDVVCYNALISGFCKA 563
           DQM +MG  PD VLYT IID+LCK G + +A SIF DMVEQG+APDV+ YNALISGFCKA
Sbjct: 383 DQMTSMGLFPDRVLYTSIIDNLCKTGKLGVAESIFRDMVEQGVAPDVISYNALISGFCKA 442

Query: 562 FRVSEAMHLYEEMQNRGLYPDELTFKLIIGGLIREKNFSLAYGVWDRMMEKGFTLDRDIS 383
            RV+EA+ LYE+MQ RGL PDE+TFKLIIGGLI+ KN S+A  +WD+MMEKGFTLDRD+S
Sbjct: 443 SRVTEALSLYEDMQTRGLNPDEITFKLIIGGLIQGKNLSVACAIWDQMMEKGFTLDRDLS 502

Query: 382 ETLINVIN 359
           +TLIN IN
Sbjct: 503 QTLINAIN 510



 Score = 69.7 bits (169), Expect = 2e-09
 Identities = 37/125 (29%), Positives = 66/125 (52%)
 Frame = -3

Query: 742 DQMINMGKSPDCVLYTVIIDHLCKIGSVEMARSIFHDMVEQGIAPDVVCYNALISGFCKA 563
           ++M  +G  PD   Y  ++   CK   ++ A  +  D +E     DVV YN +I   CK 
Sbjct: 278 EKMEGIGLEPDGYSYNQLLRGFCKANRLDKAYKLMVDKMETKGLVDVVSYNTIIRALCKT 337

Query: 562 FRVSEAMHLYEEMQNRGLYPDELTFKLIIGGLIREKNFSLAYGVWDRMMEKGFTLDRDIS 383
            +  +A  L++EM+ + + PD +TF ++I   ++E N S+A  + D+M   G   DR + 
Sbjct: 338 DQSKKAYILFKEMEQKKILPDVVTFTILIEASLKEGNSSVAKALVDQMTSMGLFPDRVLY 397

Query: 382 ETLIN 368
            ++I+
Sbjct: 398 TSIID 402



 Score = 65.1 bits (157), Expect = 4e-08
 Identities = 38/125 (30%), Positives = 61/125 (48%)
 Frame = -3

Query: 742 DQMINMGKSPDCVLYTVIIDHLCKIGSVEMARSIFHDMVEQGIAPDVVCYNALISGFCKA 563
           + M  +G  P+   Y + ++ LC    V++A  +   M E+G  PDVV Y  +ISG C+ 
Sbjct: 103 NDMDRVGIVPNFWAYNMYLNLLCSENLVDIALELIRVMGEKGREPDVVSYTIVISGLCRI 162

Query: 562 FRVSEAMHLYEEMQNRGLYPDELTFKLIIGGLIREKNFSLAYGVWDRMMEKGFTLDRDIS 383
            R   A+ ++  M  +GL PD    K ++ GL       LAY +   ++      + +I 
Sbjct: 163 GRFDNAVEMWHTMIRKGLRPDNKACKALVFGLCGSGKVDLAYELTLGILRGQVKFNTEIY 222

Query: 382 ETLIN 368
            TLIN
Sbjct: 223 NTLIN 227



 Score = 64.3 bits (155), Expect = 7e-08
 Identities = 35/124 (28%), Positives = 61/124 (49%)
 Frame = -3

Query: 742 DQMINMGKSPDCVLYTVIIDHLCKIGSVEMARSIFHDMVEQGIAPDVVCYNALISGFCKA 563
           ++M  +G S + + Y+  I  LCK+ + ++   + +DM   GI P+   YN  ++  C  
Sbjct: 68  NEMKPVGFSLNSLTYSKFICGLCKVKNFDLISRLLNDMDRVGIVPNFWAYNMYLNLLCSE 127

Query: 562 FRVSEAMHLYEEMQNRGLYPDELTFKLIIGGLIREKNFSLAYGVWDRMMEKGFTLDRDIS 383
             V  A+ L   M  +G  PD +++ ++I GL R   F  A  +W  M+ KG   D    
Sbjct: 128 NLVDIALELIRVMGEKGREPDVVSYTIVISGLCRIGRFDNAVEMWHTMIRKGLRPDNKAC 187

Query: 382 ETLI 371
           + L+
Sbjct: 188 KALV 191



 Score = 64.3 bits (155), Expect = 7e-08
 Identities = 34/124 (27%), Positives = 60/124 (48%)
 Frame = -3

Query: 703 LYTVIIDHLCKIGSVEMARSIFHDMVEQGIAPDVVCYNALISGFCKAFRVSEAMHLYEEM 524
           +Y  +I+  C+ G ++ A++I   M   G  PD+V YN  ++  C    + EAM L E+M
Sbjct: 221 IYNTLINGFCRAGRIDKAQAIKTFMKRNGCEPDLVTYNVFLNYCCNELMLEEAMKLIEKM 280

Query: 523 QNRGLYPDELTFKLIIGGLIREKNFSLAYGVWDRMMEKGFTLDRDISETLINVINSKDAS 344
           +  GL PD  ++  ++ G  +      AY +    ME    +D     T+I  +   D S
Sbjct: 281 EGIGLEPDGYSYNQLLRGFCKANRLDKAYKLMVDKMETKGLVDVVSYNTIIRALCKTDQS 340

Query: 343 RGSF 332
           + ++
Sbjct: 341 KKAY 344



 Score = 60.8 bits (146), Expect = 8e-07
 Identities = 35/106 (33%), Positives = 53/106 (50%)
 Frame = -3

Query: 712 DCVLYTVIIDHLCKIGSVEMARSIFHDMVEQGIAPDVVCYNALISGFCKAFRVSEAMHLY 533
           D V Y  II  LCK    + A  +F +M ++ I PDVV +  LI    K    S A  L 
Sbjct: 323 DVVSYNTIIRALCKTDQSKKAYILFKEMEQKKILPDVVTFTILIEASLKEGNSSVAKALV 382

Query: 532 EEMQNRGLYPDELTFKLIIGGLIREKNFSLAYGVWDRMMEKGFTLD 395
           ++M + GL+PD + +  II  L +     +A  ++  M+E+G   D
Sbjct: 383 DQMTSMGLFPDRVLYTSIIDNLCKTGKLGVAESIFRDMVEQGVAPD 428


>ref|XP_006364563.1| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
           mitochondrial-like isoform X1 [Solanum tuberosum]
          Length = 511

 Score =  189 bits (481), Expect = 1e-45
 Identities = 92/128 (71%), Positives = 108/128 (84%)
 Frame = -3

Query: 742 DQMINMGKSPDCVLYTVIIDHLCKIGSVEMARSIFHDMVEQGIAPDVVCYNALISGFCKA 563
           DQM +MG  PD VLYT IID+LCK G + +A SIF DMVEQG+APDV+ YNALISGFCKA
Sbjct: 383 DQMTSMGLFPDRVLYTSIIDNLCKTGKLGVAESIFRDMVEQGVAPDVISYNALISGFCKA 442

Query: 562 FRVSEAMHLYEEMQNRGLYPDELTFKLIIGGLIREKNFSLAYGVWDRMMEKGFTLDRDIS 383
            RV+EA+ LYE+MQ R L PDE+TFKLIIGGLI+EKN S+A  +WD+MMEKGFTLDRD+S
Sbjct: 443 SRVTEALSLYEDMQARDLNPDEITFKLIIGGLIQEKNLSVACAIWDQMMEKGFTLDRDLS 502

Query: 382 ETLINVIN 359
           +TLIN IN
Sbjct: 503 QTLINAIN 510



 Score = 71.2 bits (173), Expect = 6e-10
 Identities = 38/125 (30%), Positives = 65/125 (52%)
 Frame = -3

Query: 742 DQMINMGKSPDCVLYTVIIDHLCKIGSVEMARSIFHDMVEQGIAPDVVCYNALISGFCKA 563
           ++M   G  PD   Y  ++   CK   ++ A  +  D +E     DVV YN +I   CK 
Sbjct: 278 EKMEGNGLEPDGYSYNQLLRGFCKANRLDKAYKLMVDKMETKGLVDVVSYNTIIRALCKT 337

Query: 562 FRVSEAMHLYEEMQNRGLYPDELTFKLIIGGLIREKNFSLAYGVWDRMMEKGFTLDRDIS 383
               +A +L+EEM+ + + PD +TF ++I   ++E N S+A  + D+M   G   DR + 
Sbjct: 338 DHSKKAYNLFEEMEQKKIVPDVVTFTILIEASLKEGNSSVAKALVDQMTSMGLFPDRVLY 397

Query: 382 ETLIN 368
            ++I+
Sbjct: 398 TSIID 402



 Score = 65.1 bits (157), Expect = 4e-08
 Identities = 38/125 (30%), Positives = 61/125 (48%)
 Frame = -3

Query: 742 DQMINMGKSPDCVLYTVIIDHLCKIGSVEMARSIFHDMVEQGIAPDVVCYNALISGFCKA 563
           + M  +G  P+   Y + ++ LC    V++A  +   M E+G  PDVV Y  +ISG C+ 
Sbjct: 103 NDMDRVGIVPNFWAYNMYLNLLCSENLVDIALELIRVMGEKGREPDVVSYTIVISGLCRI 162

Query: 562 FRVSEAMHLYEEMQNRGLYPDELTFKLIIGGLIREKNFSLAYGVWDRMMEKGFTLDRDIS 383
            R   A+ ++  M  +GL PD    K ++ GL       LAY +   ++      + +I 
Sbjct: 163 GRFDNAVEMWHTMIRKGLRPDNKACKALVFGLCGSGRVDLAYELTLGILRGQVKFNTEIY 222

Query: 382 ETLIN 368
            TLIN
Sbjct: 223 NTLIN 227



 Score = 64.3 bits (155), Expect = 7e-08
 Identities = 35/124 (28%), Positives = 61/124 (49%)
 Frame = -3

Query: 742 DQMINMGKSPDCVLYTVIIDHLCKIGSVEMARSIFHDMVEQGIAPDVVCYNALISGFCKA 563
           ++M  +G S + + Y+  I  LCK+ + ++   + +DM   GI P+   YN  ++  C  
Sbjct: 68  NEMKPVGFSLNSLTYSKFICGLCKVKNFDLISRLLNDMDRVGIVPNFWAYNMYLNLLCSE 127

Query: 562 FRVSEAMHLYEEMQNRGLYPDELTFKLIIGGLIREKNFSLAYGVWDRMMEKGFTLDRDIS 383
             V  A+ L   M  +G  PD +++ ++I GL R   F  A  +W  M+ KG   D    
Sbjct: 128 NLVDIALELIRVMGEKGREPDVVSYTIVISGLCRIGRFDNAVEMWHTMIRKGLRPDNKAC 187

Query: 382 ETLI 371
           + L+
Sbjct: 188 KALV 191



 Score = 63.5 bits (153), Expect = 1e-07
 Identities = 33/125 (26%), Positives = 61/125 (48%)
 Frame = -3

Query: 703 LYTVIIDHLCKIGSVEMARSIFHDMVEQGIAPDVVCYNALISGFCKAFRVSEAMHLYEEM 524
           +Y  +I+  C+ G ++ A++I   M   G  PD+V YN  ++  C    + EA+ L E+M
Sbjct: 221 IYNTLINGFCRAGRIDKAQAIKTFMRRNGCEPDLVTYNVFLNYCCNELMLEEAVKLIEKM 280

Query: 523 QNRGLYPDELTFKLIIGGLIREKNFSLAYGVWDRMMEKGFTLDRDISETLINVINSKDAS 344
           +  GL PD  ++  ++ G  +      AY +    ME    +D     T+I  +   D S
Sbjct: 281 EGNGLEPDGYSYNQLLRGFCKANRLDKAYKLMVDKMETKGLVDVVSYNTIIRALCKTDHS 340

Query: 343 RGSFS 329
           + +++
Sbjct: 341 KKAYN 345



 Score = 62.4 bits (150), Expect = 3e-07
 Identities = 35/106 (33%), Positives = 54/106 (50%)
 Frame = -3

Query: 712 DCVLYTVIIDHLCKIGSVEMARSIFHDMVEQGIAPDVVCYNALISGFCKAFRVSEAMHLY 533
           D V Y  II  LCK    + A ++F +M ++ I PDVV +  LI    K    S A  L 
Sbjct: 323 DVVSYNTIIRALCKTDHSKKAYNLFEEMEQKKIVPDVVTFTILIEASLKEGNSSVAKALV 382

Query: 532 EEMQNRGLYPDELTFKLIIGGLIREKNFSLAYGVWDRMMEKGFTLD 395
           ++M + GL+PD + +  II  L +     +A  ++  M+E+G   D
Sbjct: 383 DQMTSMGLFPDRVLYTSIIDNLCKTGKLGVAESIFRDMVEQGVAPD 428


>ref|XP_008221931.1| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
           mitochondrial [Prunus mume]
          Length = 527

 Score =  186 bits (472), Expect = 1e-44
 Identities = 90/134 (67%), Positives = 105/134 (78%)
 Frame = -3

Query: 742 DQMINMGKSPDCVLYTVIIDHLCKIGSVEMARSIFHDMVEQGIAPDVVCYNALISGFCKA 563
           DQM  MG  PD + YT I+DHLCK G + MA S+F DM+E+GIAPD V +NALI+G CKA
Sbjct: 383 DQMTVMGLLPDRIFYTTIVDHLCKSGKIAMAYSVFSDMLEKGIAPDAVSFNALINGLCKA 442

Query: 562 FRVSEAMHLYEEMQNRGLYPDELTFKLIIGGLIREKNFSLAYGVWDRMMEKGFTLDRDIS 383
            RVSEAMHLYEEMQNRG  PDE+TFKLIIGGLIRE   S+A  VWD+MMEKGFTLD  +S
Sbjct: 443 SRVSEAMHLYEEMQNRGCCPDEVTFKLIIGGLIRENKLSVACRVWDQMMEKGFTLDGAVS 502

Query: 382 ETLINVINSKDASR 341
           E L+N I+SKD  +
Sbjct: 503 ERLVNAIHSKDGMK 516



 Score = 71.2 bits (173), Expect = 6e-10
 Identities = 38/124 (30%), Positives = 62/124 (50%)
 Frame = -3

Query: 739 QMINMGKSPDCVLYTVIIDHLCKIGSVEMARSIFHDMVEQGIAPDVVCYNALISGFCKAF 560
           +M   G  PD   Y  ++  LC+    + A  +    +E     +VV YN +I+ FC+A 
Sbjct: 279 KMERSGMEPDVHSYNQLLKGLCQANRADKAYLLMRTRMEPKGLCNVVSYNTIITAFCRAH 338

Query: 559 RVSEAMHLYEEMQNRGLYPDELTFKLIIGGLIREKNFSLAYGVWDRMMEKGFTLDRDISE 380
           R   A  L+EEM  +G  PD +TF ++I   +RE +  +A  + D+M   G   DR    
Sbjct: 339 RTGRAYKLFEEMGQKGTMPDVVTFTILIEAFLREGSSDIANKLLDQMTVMGLLPDRIFYT 398

Query: 379 TLIN 368
           T+++
Sbjct: 399 TIVD 402



 Score = 70.9 bits (172), Expect = 8e-10
 Identities = 34/123 (27%), Positives = 60/123 (48%)
 Frame = -3

Query: 739 QMINMGKSPDCVLYTVIIDHLCKIGSVEMARSIFHDMVEQGIAPDVVCYNALISGFCKAF 560
           +M+  G S     Y+  I  LCKI +  +   +  DM   G  PD+  +N  ++  C+  
Sbjct: 69  EMVPQGFSLSAFTYSRFISGLCKIRNFTLIEKLIRDMDRLGAVPDIWAFNIYLNLLCQEN 128

Query: 559 RVSEAMHLYEEMQNRGLYPDELTFKLIIGGLIREKNFSLAYGVWDRMMEKGFTLDRDISE 380
           R   A+ ++  M ++G  PD +++ ++I GL + + F  A  +W  M+ KGF  D     
Sbjct: 129 RAHFALEVFHRMVDKGREPDVVSYTILIDGLCKARQFDKAVDIWTSMIRKGFKPDNIACT 188

Query: 379 TLI 371
            L+
Sbjct: 189 ALV 191



 Score = 70.1 bits (170), Expect = 1e-09
 Identities = 39/123 (31%), Positives = 59/123 (47%)
 Frame = -3

Query: 736 MINMGKSPDCVLYTVIIDHLCKIGSVEMARSIFHDMVEQGIAPDVVCYNALISGFCKAFR 557
           M  +G  PD   + + ++ LC+      A  +FH MV++G  PDVV Y  LI G CKA +
Sbjct: 105 MDRLGAVPDIWAFNIYLNLLCQENRAHFALEVFHRMVDKGREPDVVSYTILIDGLCKARQ 164

Query: 556 VSEAMHLYEEMQNRGLYPDELTFKLIIGGLIREKNFSLAYGVWDRMMEKGFTLDRDISET 377
             +A+ ++  M  +G  PD +    ++ GL       LAY +    M+        I  T
Sbjct: 165 FDKAVDIWTSMIRKGFKPDNIACTALVVGLCDGGKVDLAYNLVIGEMKGQVKFSNLIYNT 224

Query: 376 LIN 368
           LIN
Sbjct: 225 LIN 227



 Score = 63.5 bits (153), Expect = 1e-07
 Identities = 36/113 (31%), Positives = 53/113 (46%)
 Frame = -3

Query: 706 VLYTVIIDHLCKIGSVEMARSIFHDMVEQGIAPDVVCYNALISGFCKAFRVSEAMHLYEE 527
           V Y  II   C+      A  +F +M ++G  PDVV +  LI  F +      A  L ++
Sbjct: 325 VSYNTIITAFCRAHRTGRAYKLFEEMGQKGTMPDVVTFTILIEAFLREGSSDIANKLLDQ 384

Query: 526 MQNRGLYPDELTFKLIIGGLIREKNFSLAYGVWDRMMEKGFTLDRDISETLIN 368
           M   GL PD + +  I+  L +    ++AY V+  M+EKG   D      LIN
Sbjct: 385 MTVMGLLPDRIFYTTIVDHLCKSGKIAMAYSVFSDMLEKGIAPDAVSFNALIN 437



 Score = 60.8 bits (146), Expect = 8e-07
 Identities = 35/124 (28%), Positives = 54/124 (43%)
 Frame = -3

Query: 739 QMINMGKSPDCVLYTVIIDHLCKIGSVEMARSIFHDMVEQGIAPDVVCYNALISGFCKAF 560
           +M++ G+ PD V YT++ID LCK    + A  I+  M+ +G  PD +   AL+ G C   
Sbjct: 139 RMVDKGREPDVVSYTILIDGLCKARQFDKAVDIWTSMIRKGFKPDNIACTALVVGLCDGG 198

Query: 559 RVSEAMHLYEEMQNRGLYPDELTFKLIIGGLIREKNFSLAYGVWDRMMEKGFTLDRDISE 380
           +V  A +L        +    L +  +I G  R      A  +   M   G   D     
Sbjct: 199 KVDLAYNLVIGEMKGQVKFSNLIYNTLINGFCRAGRIDKAQAIKSFMKRNGCESDLVTHN 258

Query: 379 TLIN 368
            L+N
Sbjct: 259 VLLN 262


>gb|KHN29017.1| Pentatricopeptide repeat-containing protein, mitochondrial [Glycine
           soja]
          Length = 377

 Score =  184 bits (466), Expect = 6e-44
 Identities = 81/133 (60%), Positives = 106/133 (79%)
 Frame = -3

Query: 742 DQMINMGKSPDCVLYTVIIDHLCKIGSVEMARSIFHDMVEQGIAPDVVCYNALISGFCKA 563
           D+M  M   PDC+ YT ++DHLCK G V++A S+F DMVE G+ PDV+ YNAL++GFCK 
Sbjct: 244 DEMTKMRVLPDCIFYTAVVDHLCKNGKVDVAHSVFRDMVENGVNPDVISYNALLNGFCKT 303

Query: 562 FRVSEAMHLYEEMQNRGLYPDELTFKLIIGGLIREKNFSLAYGVWDRMMEKGFTLDRDIS 383
            RV +AMHL++EMQ++GLYPDE+T+KLI+GGLIR K  SLA  VWD+MME+GFTL+R +S
Sbjct: 304 SRVMDAMHLFDEMQSKGLYPDEVTYKLIVGGLIRGKKISLACRVWDQMMERGFTLNRHLS 363

Query: 382 ETLINVINSKDAS 344
           ETL+N I S D +
Sbjct: 364 ETLVNAIQSSDGT 376



 Score = 66.2 bits (160), Expect = 2e-08
 Identities = 37/124 (29%), Positives = 62/124 (50%), Gaps = 1/124 (0%)
 Frame = -3

Query: 736 MINMGKSPDCVLYTVIIDHLCKIGSVEMARSIFHDMVEQGIAPDVVCYNALISGFCKAFR 557
           M   G  PD V Y +++++ C+ G V+ A  +   M   G+ PD+  YN L+ GFCKA  
Sbjct: 106 MSRTGCVPDLVTYNILLNYCCEEGMVDEAVRLVETMERSGVEPDLYSYNELLKGFCKANM 165

Query: 556 VSEA-MHLYEEMQNRGLYPDELTFKLIIGGLIREKNFSLAYGVWDRMMEKGFTLDRDISE 380
           V  A + + E MQ +G+  D +++  +I    + +     Y +++ M  KG   D     
Sbjct: 166 VDRAHLMMVERMQTKGMC-DVVSYNTVITAFCKARRTRKGYELFEEMCGKGIRPDMVTFN 224

Query: 379 TLIN 368
            LI+
Sbjct: 225 ILID 228



 Score = 66.2 bits (160), Expect = 2e-08
 Identities = 34/108 (31%), Positives = 55/108 (50%)
 Frame = -3

Query: 742 DQMINMGKSPDCVLYTVIIDHLCKIGSVEMARSIFHDMVEQGIAPDVVCYNALISGFCKA 563
           + M   G  PD   Y  ++   CK   V+ A  +  + ++     DVV YN +I+ FCKA
Sbjct: 139 ETMERSGVEPDLYSYNELLKGFCKANMVDRAHLMMVERMQTKGMCDVVSYNTVITAFCKA 198

Query: 562 FRVSEAMHLYEEMQNRGLYPDELTFKLIIGGLIREKNFSLAYGVWDRM 419
            R  +   L+EEM  +G+ PD +TF ++I   +RE +  +   + D M
Sbjct: 199 RRTRKGYELFEEMCGKGIRPDMVTFNILIDAFLREGSTHVVKKLLDEM 246



 Score = 60.1 bits (144), Expect = 1e-06
 Identities = 34/111 (30%), Positives = 57/111 (51%), Gaps = 1/111 (0%)
 Frame = -3

Query: 736 MINMGKSPDCVLYTVIIDHLCKIGSVEMARSIFHDMVEQGIAPDVVCYNALISGFCKAFR 557
           +I  G   + ++Y  +ID  C++G V+ A  I   M   G  PD+V YN L++  C+   
Sbjct: 71  VIKGGVKVNSLVYNALIDGFCRMGRVDKAMKIKAFMSRTGCVPDLVTYNILLNYCCEEGM 130

Query: 556 VSEAMHLYEEMQNRGLYPDELTFKLIIGGLIREKNFSLAYGVW-DRMMEKG 407
           V EA+ L E M+  G+ PD  ++  ++ G  +      A+ +  +RM  KG
Sbjct: 131 VDEAVRLVETMERSGVEPDLYSYNELLKGFCKANMVDRAHLMMVERMQTKG 181



 Score = 59.7 bits (143), Expect = 2e-06
 Identities = 33/115 (28%), Positives = 57/115 (49%)
 Frame = -3

Query: 739 QMINMGKSPDCVLYTVIIDHLCKIGSVEMARSIFHDMVEQGIAPDVVCYNALISGFCKAF 560
           ++I+ G SPD      ++  LC  G V++A  +   +++ G+  + + YNALI GFC+  
Sbjct: 35  RLIDKGLSPDYKACVALVVGLCSGGRVDLAYELVVGVIKGGVKVNSLVYNALIDGFCRMG 94

Query: 559 RVSEAMHLYEEMQNRGLYPDELTFKLIIGGLIREKNFSLAYGVWDRMMEKGFTLD 395
           RV +AM +   M   G  PD +T+ +++     E     A  + + M   G   D
Sbjct: 95  RVDKAMKIKAFMSRTGCVPDLVTYNILLNYCCEEGMVDEAVRLVETMERSGVEPD 149


>ref|XP_003531325.2| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
           mitochondrial-like isoform X1 [Glycine max]
           gi|571471241|ref|XP_006585252.1| PREDICTED:
           pentatricopeptide repeat-containing protein At1g13040,
           mitochondrial-like isoform X2 [Glycine max]
          Length = 521

 Score =  184 bits (466), Expect = 6e-44
 Identities = 81/133 (60%), Positives = 106/133 (79%)
 Frame = -3

Query: 742 DQMINMGKSPDCVLYTVIIDHLCKIGSVEMARSIFHDMVEQGIAPDVVCYNALISGFCKA 563
           D+M  M   PDC+ YT ++DHLCK G V++A S+F DMVE G+ PDV+ YNAL++GFCK 
Sbjct: 388 DEMTKMRVLPDCIFYTAVVDHLCKNGKVDVAHSVFRDMVENGVNPDVISYNALLNGFCKT 447

Query: 562 FRVSEAMHLYEEMQNRGLYPDELTFKLIIGGLIREKNFSLAYGVWDRMMEKGFTLDRDIS 383
            RV +AMHL++EMQ++GLYPDE+T+KLI+GGLIR K  SLA  VWD+MME+GFTL+R +S
Sbjct: 448 SRVMDAMHLFDEMQSKGLYPDEVTYKLIVGGLIRGKKISLACRVWDQMMERGFTLNRHLS 507

Query: 382 ETLINVINSKDAS 344
           ETL+N I S D +
Sbjct: 508 ETLVNAIQSSDGT 520



 Score = 66.2 bits (160), Expect = 2e-08
 Identities = 37/124 (29%), Positives = 62/124 (50%), Gaps = 1/124 (0%)
 Frame = -3

Query: 736 MINMGKSPDCVLYTVIIDHLCKIGSVEMARSIFHDMVEQGIAPDVVCYNALISGFCKAFR 557
           M   G  PD V Y +++++ C+ G V+ A  +   M   G+ PD+  YN L+ GFCKA  
Sbjct: 250 MSRTGCVPDLVTYNILLNYCCEEGMVDEAVRLVETMERSGVEPDLYSYNELLKGFCKANM 309

Query: 556 VSEA-MHLYEEMQNRGLYPDELTFKLIIGGLIREKNFSLAYGVWDRMMEKGFTLDRDISE 380
           V  A + + E MQ +G+  D +++  +I    + +     Y +++ M  KG   D     
Sbjct: 310 VDRAHLMMVERMQTKGMC-DVVSYNTVITAFCKARRTRKGYELFEEMCGKGIRPDMVTFN 368

Query: 379 TLIN 368
            LI+
Sbjct: 369 ILID 372



 Score = 66.2 bits (160), Expect = 2e-08
 Identities = 34/108 (31%), Positives = 55/108 (50%)
 Frame = -3

Query: 742 DQMINMGKSPDCVLYTVIIDHLCKIGSVEMARSIFHDMVEQGIAPDVVCYNALISGFCKA 563
           + M   G  PD   Y  ++   CK   V+ A  +  + ++     DVV YN +I+ FCKA
Sbjct: 283 ETMERSGVEPDLYSYNELLKGFCKANMVDRAHLMMVERMQTKGMCDVVSYNTVITAFCKA 342

Query: 562 FRVSEAMHLYEEMQNRGLYPDELTFKLIIGGLIREKNFSLAYGVWDRM 419
            R  +   L+EEM  +G+ PD +TF ++I   +RE +  +   + D M
Sbjct: 343 RRTRKGYELFEEMCGKGIRPDMVTFNILIDAFLREGSTHVVKKLLDEM 390



 Score = 61.6 bits (148), Expect = 5e-07
 Identities = 35/123 (28%), Positives = 60/123 (48%)
 Frame = -3

Query: 736 MINMGKSPDCVLYTVIIDHLCKIGSVEMARSIFHDMVEQGIAPDVVCYNALISGFCKAFR 557
           M ++G  PD   +   ++ LC+   +E A  +FH M  +G  PDVV Y  +I   C A R
Sbjct: 110 MDSLGFVPDIWAFNTYLNLLCRQNRLETALELFHSMPSKGRDPDVVSYTIIIDALCNAKR 169

Query: 556 VSEAMHLYEEMQNRGLYPDELTFKLIIGGLIREKNFSLAYGVWDRMMEKGFTLDRDISET 377
             EA  ++  + ++GL PD      ++ GL       LAY +   +++ G  ++  +   
Sbjct: 170 FDEAAKVWRRLIDKGLSPDYKACVALVVGLCSGGRVDLAYELVVGVIKGGVKVNSLVYNA 229

Query: 376 LIN 368
           LI+
Sbjct: 230 LID 232



 Score = 60.5 bits (145), Expect = 1e-06
 Identities = 31/105 (29%), Positives = 54/105 (51%), Gaps = 3/105 (2%)
 Frame = -3

Query: 700 YTVIIDHLCKIGS---VEMARSIFHDMVEQGIAPDVVCYNALISGFCKAFRVSEAMHLYE 530
           Y+  I  LC   +   + +  S+  DM   G  PD+  +N  ++  C+  R+  A+ L+ 
Sbjct: 84  YSRFISALCSAPNNINLPLIHSLLLDMDSLGFVPDIWAFNTYLNLLCRQNRLETALELFH 143

Query: 529 EMQNRGLYPDELTFKLIIGGLIREKNFSLAYGVWDRMMEKGFTLD 395
            M ++G  PD +++ +II  L   K F  A  VW R+++KG + D
Sbjct: 144 SMPSKGRDPDVVSYTIIIDALCNAKRFDEAAKVWRRLIDKGLSPD 188



 Score = 60.1 bits (144), Expect = 1e-06
 Identities = 34/111 (30%), Positives = 57/111 (51%), Gaps = 1/111 (0%)
 Frame = -3

Query: 736 MINMGKSPDCVLYTVIIDHLCKIGSVEMARSIFHDMVEQGIAPDVVCYNALISGFCKAFR 557
           +I  G   + ++Y  +ID  C++G V+ A  I   M   G  PD+V YN L++  C+   
Sbjct: 215 VIKGGVKVNSLVYNALIDGFCRMGRVDKAMKIKAFMSRTGCVPDLVTYNILLNYCCEEGM 274

Query: 556 VSEAMHLYEEMQNRGLYPDELTFKLIIGGLIREKNFSLAYGVW-DRMMEKG 407
           V EA+ L E M+  G+ PD  ++  ++ G  +      A+ +  +RM  KG
Sbjct: 275 VDEAVRLVETMERSGVEPDLYSYNELLKGFCKANMVDRAHLMMVERMQTKG 325



 Score = 59.7 bits (143), Expect = 2e-06
 Identities = 33/115 (28%), Positives = 57/115 (49%)
 Frame = -3

Query: 739 QMINMGKSPDCVLYTVIIDHLCKIGSVEMARSIFHDMVEQGIAPDVVCYNALISGFCKAF 560
           ++I+ G SPD      ++  LC  G V++A  +   +++ G+  + + YNALI GFC+  
Sbjct: 179 RLIDKGLSPDYKACVALVVGLCSGGRVDLAYELVVGVIKGGVKVNSLVYNALIDGFCRMG 238

Query: 559 RVSEAMHLYEEMQNRGLYPDELTFKLIIGGLIREKNFSLAYGVWDRMMEKGFTLD 395
           RV +AM +   M   G  PD +T+ +++     E     A  + + M   G   D
Sbjct: 239 RVDKAMKIKAFMSRTGCVPDLVTYNILLNYCCEEGMVDEAVRLVETMERSGVEPD 293


>ref|XP_004310156.1| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
           mitochondrial [Fragaria vesca subsp. vesca]
           gi|764644943|ref|XP_011457417.1| PREDICTED:
           pentatricopeptide repeat-containing protein At1g13040,
           mitochondrial [Fragaria vesca subsp. vesca]
           gi|764644946|ref|XP_011457418.1| PREDICTED:
           pentatricopeptide repeat-containing protein At1g13040,
           mitochondrial [Fragaria vesca subsp. vesca]
          Length = 516

 Score =  183 bits (465), Expect = 8e-44
 Identities = 86/131 (65%), Positives = 105/131 (80%)
 Frame = -3

Query: 742 DQMINMGKSPDCVLYTVIIDHLCKIGSVEMARSIFHDMVEQGIAPDVVCYNALISGFCKA 563
           DQM  M   PD + YT IIDHLCK G + MA  +F+DM+E+GI  DVV YNALISG C+A
Sbjct: 384 DQMTGMDLLPDRIFYTTIIDHLCKSGKIAMACDMFNDMLEKGITADVVLYNALISGLCRA 443

Query: 562 FRVSEAMHLYEEMQNRGLYPDELTFKLIIGGLIREKNFSLAYGVWDRMMEKGFTLDRDIS 383
            RV+EAMHLYEEMQ RG +PDE+T+K++IGGLI++K  S+A GVWD MMEKGFTLDR +S
Sbjct: 444 SRVTEAMHLYEEMQTRGCFPDEVTYKVVIGGLIKDKRLSVACGVWDEMMEKGFTLDRVLS 503

Query: 382 ETLINVINSKD 350
           ETLIN ++SKD
Sbjct: 504 ETLINAVHSKD 514



 Score = 66.2 bits (160), Expect = 2e-08
 Identities = 31/115 (26%), Positives = 58/115 (50%)
 Frame = -3

Query: 739 QMINMGKSPDCVLYTVIIDHLCKIGSVEMARSIFHDMVEQGIAPDVVCYNALISGFCKAF 560
           +M   G S     Y+  I  LC + +  +   +  DM   G  PD+  +N  ++  C+  
Sbjct: 70  EMAPQGFSLTPFTYSRFISGLCNVNNFTLIEKLLRDMDRLGSVPDIWAFNIYLNLLCQEN 129

Query: 559 RVSEAMHLYEEMQNRGLYPDELTFKLIIGGLIREKNFSLAYGVWDRMMEKGFTLD 395
           R+  A+ +++ M ++G  PD +++ ++I GL +   F  A  +W+ M+ KGF  D
Sbjct: 130 RIHYALEVFDRMADKGREPDVVSYTIVIHGLCKAGRFDNAVEIWNGMISKGFRPD 184



 Score = 65.5 bits (158), Expect = 3e-08
 Identities = 37/125 (29%), Positives = 57/125 (45%)
 Frame = -3

Query: 742 DQMINMGKSPDCVLYTVIIDHLCKIGSVEMARSIFHDMVEQGIAPDVVCYNALISGFCKA 563
           D+M + G+ PD V YT++I  LCK G  + A  I++ M+ +G  PD +   AL+ G C  
Sbjct: 139 DRMADKGREPDVVSYTIVIHGLCKAGRFDNAVEIWNGMISKGFRPDTIACTALVVGLCGG 198

Query: 562 FRVSEAMHLYEEMQNRGLYPDELTFKLIIGGLIREKNFSLAYGVWDRMMEKGFTLDRDIS 383
            +V  A  L       G+  + L +  +I G  R +    A  +   M   G   D    
Sbjct: 199 GKVDLAYDLVIGEMKGGVEFNNLIYNALISGFCRARRIDKAQAIKLFMKRNGCKPDLVTH 258

Query: 382 ETLIN 368
             L+N
Sbjct: 259 NVLLN 263



 Score = 65.1 bits (157), Expect = 4e-08
 Identities = 36/123 (29%), Positives = 59/123 (47%)
 Frame = -3

Query: 736 MINMGKSPDCVLYTVIIDHLCKIGSVEMARSIFHDMVEQGIAPDVVCYNALISGFCKAFR 557
           M  +G  PD   + + ++ LC+   +  A  +F  M ++G  PDVV Y  +I G CKA R
Sbjct: 106 MDRLGSVPDIWAFNIYLNLLCQENRIHYALEVFDRMADKGREPDVVSYTIVIHGLCKAGR 165

Query: 556 VSEAMHLYEEMQNRGLYPDELTFKLIIGGLIREKNFSLAYGVWDRMMEKGFTLDRDISET 377
              A+ ++  M ++G  PD +    ++ GL       LAY +    M+ G   +  I   
Sbjct: 166 FDNAVEIWNGMISKGFRPDTIACTALVVGLCGGGKVDLAYDLVIGEMKGGVEFNNLIYNA 225

Query: 376 LIN 368
           LI+
Sbjct: 226 LIS 228



 Score = 64.3 bits (155), Expect = 7e-08
 Identities = 38/124 (30%), Positives = 60/124 (48%)
 Frame = -3

Query: 739 QMINMGKSPDCVLYTVIIDHLCKIGSVEMARSIFHDMVEQGIAPDVVCYNALISGFCKAF 560
           QM  +G   D   Y   +  LCK    E A     +M+E     +VV +N +I   CK  
Sbjct: 280 QMEKIGMKLDAYSYNGFLKGLCKDNRPEKAYLFMKNMMEPKGLCNVVSFNTIIMACCKGG 339

Query: 559 RVSEAMHLYEEMQNRGLYPDELTFKLIIGGLIREKNFSLAYGVWDRMMEKGFTLDRDISE 380
           +   A  L++EM  +G+ PD +TF ++IG  +RE +  +A  + D+M       DR    
Sbjct: 340 QTRRAYKLFQEMFQKGILPDVVTFTILIGAFLREGSSDVAKKLLDQMTGMDLLPDRIFYT 399

Query: 379 TLIN 368
           T+I+
Sbjct: 400 TIID 403


>ref|XP_012845460.1| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
           mitochondrial [Erythranthe guttatus]
           gi|604319419|gb|EYU30611.1| hypothetical protein
           MIMGU_mgv1a020771mg [Erythranthe guttata]
          Length = 515

 Score =  182 bits (462), Expect = 2e-43
 Identities = 88/133 (66%), Positives = 104/133 (78%)
 Frame = -3

Query: 742 DQMINMGKSPDCVLYTVIIDHLCKIGSVEMARSIFHDMVEQGIAPDVVCYNALISGFCKA 563
           DQM  M   P   LYT I+DHLCK G ++ AR IFHDMVEQGI PDVV YNALI G C+A
Sbjct: 383 DQMTKMNLFPSLELYTTIVDHLCKTGRIKAARGIFHDMVEQGIRPDVVSYNALICGCCRA 442

Query: 562 FRVSEAMHLYEEMQNRGLYPDELTFKLIIGGLIREKNFSLAYGVWDRMMEKGFTLDRDIS 383
           F VSEA+HL+E+MQ+ G++PDE+TFKLII GLI+EK   LA G+WD+MMEKGFTLD   S
Sbjct: 443 FEVSEALHLFEQMQSSGVHPDEVTFKLIIRGLIKEKKLPLACGMWDQMMEKGFTLDSYSS 502

Query: 382 ETLINVINSKDAS 344
           ETLI+ INSK+ S
Sbjct: 503 ETLIDAINSKEVS 515



 Score = 70.5 bits (171), Expect = 1e-09
 Identities = 38/124 (30%), Positives = 63/124 (50%)
 Frame = -3

Query: 739 QMINMGKSPDCVLYTVIIDHLCKIGSVEMARSIFHDMVEQGIAPDVVCYNALISGFCKAF 560
           +M   G  PD   Y  ++  LCK   V+ A  +  D +E     DVV YN ++S  CKA 
Sbjct: 279 KMERSGMEPDIYSYNELLKGLCKASRVDKAYLLLVDKMEAKGFVDVVSYNTIVSALCKAG 338

Query: 559 RVSEAMHLYEEMQNRGLYPDELTFKLIIGGLIREKNFSLAYGVWDRMMEKGFTLDRDISE 380
           R  EA  L  EM  +G+ PD +TF ++I   +++ N  +A  + D+M +       ++  
Sbjct: 339 RSGEAYKLLGEMGRKGVAPDVITFTILIDAFLKKGNSVIAKDLLDQMTKMNLFPSLELYT 398

Query: 379 TLIN 368
           T+++
Sbjct: 399 TIVD 402



 Score = 62.8 bits (151), Expect = 2e-07
 Identities = 33/124 (26%), Positives = 61/124 (49%)
 Frame = -3

Query: 742 DQMINMGKSPDCVLYTVIIDHLCKIGSVEMARSIFHDMVEQGIAPDVVCYNALISGFCKA 563
           + + + G S +   Y+  I  LC++ + E+   +F DM   GI PD+  +N  +   C  
Sbjct: 68  ESLNSKGFSLNSFTYSRFISGLCELRNFELISRLFADMDSLGIVPDIWAFNIYMYLLCSE 127

Query: 562 FRVSEAMHLYEEMQNRGLYPDELTFKLIIGGLIREKNFSLAYGVWDRMMEKGFTLDRDIS 383
             V +A+ +   M  +G  PD +++ ++I G  R K +  A  +W  M++KG   D +  
Sbjct: 128 SLVDDALKILGLMGEKGREPDVVSYTIMISGFCRIKLYDEAIELWKVMIKKGLNPDNEAC 187

Query: 382 ETLI 371
             L+
Sbjct: 188 RALV 191



 Score = 61.2 bits (147), Expect = 6e-07
 Identities = 38/128 (29%), Positives = 62/128 (48%), Gaps = 1/128 (0%)
 Frame = -3

Query: 724 GKSPDCVLYTVIIDHLCKIGSVEMARSIFHDMVEQGIAPDVVCYNALISGFCKAFRVSEA 545
           G  PD V + V++++ C    +E A  +   M   G+ PD+  YN L+ G CKA RV +A
Sbjct: 249 GCEPDLVTHNVLLNYCCNALMLEEAHKLIAKMERSGMEPDIYSYNELLKGLCKASRVDKA 308

Query: 544 -MHLYEEMQNRGLYPDELTFKLIIGGLIREKNFSLAYGVWDRMMEKGFTLDRDISETLIN 368
            + L ++M+ +G + D +++  I+  L +      AY +   M  KG   D      LI+
Sbjct: 309 YLLLVDKMEAKG-FVDVVSYNTIVSALCKAGRSGEAYKLLGEMGRKGVAPDVITFTILID 367

Query: 367 VINSKDAS 344
               K  S
Sbjct: 368 AFLKKGNS 375



 Score = 60.8 bits (146), Expect = 8e-07
 Identities = 32/102 (31%), Positives = 55/102 (53%), Gaps = 1/102 (0%)
 Frame = -3

Query: 706 VLYTVIIDHLCKIGSVEMARSIFHDMVEQGIAPDVVCYNALISGFCKAFRVSEAMHLYEE 527
           V+Y  +I   C++G ++ A +I + M   G  PD+V +N L++  C A  + EA  L  +
Sbjct: 220 VIYNALICGFCRVGRIDKALAIKNFMRRNGCEPDLVTHNVLLNYCCNALMLEEAHKLIAK 279

Query: 526 MQNRGLYPDELTFKLIIGGLIREKNFSLAYGVW-DRMMEKGF 404
           M+  G+ PD  ++  ++ GL +      AY +  D+M  KGF
Sbjct: 280 MERSGMEPDIYSYNELLKGLCKASRVDKAYLLLVDKMEAKGF 321



 Score = 59.7 bits (143), Expect = 2e-06
 Identities = 35/100 (35%), Positives = 51/100 (51%)
 Frame = -3

Query: 736 MINMGKSPDCVLYTVIIDHLCKIGSVEMARSIFHDMVEQGIAPDVVCYNALISGFCKAFR 557
           M ++G  PD   + + +  LC    V+ A  I   M E+G  PDVV Y  +ISGFC+   
Sbjct: 105 MDSLGIVPDIWAFNIYMYLLCSESLVDDALKILGLMGEKGREPDVVSYTIMISGFCRIKL 164

Query: 556 VSEAMHLYEEMQNRGLYPDELTFKLIIGGLIREKNFSLAY 437
             EA+ L++ M  +GL PD    + ++ GL       LAY
Sbjct: 165 YDEAIELWKVMIKKGLNPDNEACRALVLGLCDSGKVDLAY 204


>ref|XP_002282301.1| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
           mitochondrial [Vitis vinifera]
           gi|731372614|ref|XP_010650646.1| PREDICTED:
           pentatricopeptide repeat-containing protein At1g13040,
           mitochondrial [Vitis vinifera]
           gi|731372618|ref|XP_010650652.1| PREDICTED:
           pentatricopeptide repeat-containing protein At1g13040,
           mitochondrial [Vitis vinifera]
           gi|731372622|ref|XP_010650660.1| PREDICTED:
           pentatricopeptide repeat-containing protein At1g13040,
           mitochondrial [Vitis vinifera]
           gi|731372628|ref|XP_010650672.1| PREDICTED:
           pentatricopeptide repeat-containing protein At1g13040,
           mitochondrial [Vitis vinifera]
           gi|296081374|emb|CBI16807.3| unnamed protein product
           [Vitis vinifera]
          Length = 519

 Score =  181 bits (460), Expect = 3e-43
 Identities = 90/133 (67%), Positives = 103/133 (77%)
 Frame = -3

Query: 742 DQMINMGKSPDCVLYTVIIDHLCKIGSVEMARSIFHDMVEQGIAPDVVCYNALISGFCKA 563
           DQM  +G  PD VLYT I+DHLCK G + MA S+F DMVE GI PDVV YNALI+G C+A
Sbjct: 383 DQMTGLGLLPDRVLYTTIVDHLCKTGKMGMAHSVFCDMVESGITPDVVSYNALINGLCRA 442

Query: 562 FRVSEAMHLYEEMQNRGLYPDELTFKLIIGGLIREKNFSLAYGVWDRMMEKGFTLDRDIS 383
            RVSEAMHLYE+M   G  PDE+TFKLIIGGLI EK  S+A  VWD+MMEKGFTLD  +S
Sbjct: 443 SRVSEAMHLYEDMHTGGPCPDEVTFKLIIGGLIWEKKLSVACRVWDQMMEKGFTLDGAVS 502

Query: 382 ETLINVINSKDAS 344
           ETL+N I+S DAS
Sbjct: 503 ETLVNAIHSNDAS 515



 Score = 72.8 bits (177), Expect = 2e-10
 Identities = 37/124 (29%), Positives = 61/124 (49%)
 Frame = -3

Query: 742 DQMINMGKSPDCVLYTVIIDHLCKIGSVEMARSIFHDMVEQGIAPDVVCYNALISGFCKA 563
           D+MI  G S +   Y+  I  LCK+ +  +   +  DM   G  PD+  YN  ++  C  
Sbjct: 68  DRMIPQGFSLNSFTYSRFISGLCKVKNFVLIEKLLEDMDRLGYVPDIWAYNIYLNLLCCE 127

Query: 562 FRVSEAMHLYEEMQNRGLYPDELTFKLIIGGLIREKNFSLAYGVWDRMMEKGFTLDRDIS 383
            ++  A+ + + M  +G  PD +T+ ++I GL R   F  A  +W  M+ KGF+ D    
Sbjct: 128 NQLDVALGVVQTMVEKGREPDIVTYTIVINGLCRAGRFDSAVEIWRNMVRKGFSPDEKAC 187

Query: 382 ETLI 371
             L+
Sbjct: 188 RALV 191



 Score = 72.4 bits (176), Expect = 3e-10
 Identities = 37/125 (29%), Positives = 62/125 (49%)
 Frame = -3

Query: 742 DQMINMGKSPDCVLYTVIIDHLCKIGSVEMARSIFHDMVEQGIAPDVVCYNALISGFCKA 563
           + M  +G  PD   Y + ++ LC    +++A  +   MVE+G  PD+V Y  +I+G C+A
Sbjct: 103 EDMDRLGYVPDIWAYNIYLNLLCCENQLDVALGVVQTMVEKGREPDIVTYTIVINGLCRA 162

Query: 562 FRVSEAMHLYEEMQNRGLYPDELTFKLIIGGLIREKNFSLAYGVWDRMMEKGFTLDRDIS 383
            R   A+ ++  M  +G  PDE   + ++ GL  +    LAY +    M       + I 
Sbjct: 163 GRFDSAVEIWRNMVRKGFSPDEKACRALVLGLCHDGKVDLAYELTVGAMRGRIKFSKSIY 222

Query: 382 ETLIN 368
            +LIN
Sbjct: 223 NSLIN 227



 Score = 70.5 bits (171), Expect = 1e-09
 Identities = 38/124 (30%), Positives = 63/124 (50%)
 Frame = -3

Query: 739 QMINMGKSPDCVLYTVIIDHLCKIGSVEMARSIFHDMVEQGIAPDVVCYNALISGFCKAF 560
           +M   G  PD   Y  ++  LCK   ++ A  +  + +E     DVV YN +I   C A 
Sbjct: 279 KMERSGVEPDVYSYNELLKGLCKANRLDKAYMMMVNKMEAKGLCDVVSYNTIIKALCTAS 338

Query: 559 RVSEAMHLYEEMQNRGLYPDELTFKLIIGGLIREKNFSLAYGVWDRMMEKGFTLDRDISE 380
               A  L+EEM  +G+ PD +TF ++I   +RE + ++A  + D+M   G   DR +  
Sbjct: 339 HTKRAYKLFEEMGGKGITPDVVTFTILIKAFLREGSSNIAKKLLDQMTGLGLLPDRVLYT 398

Query: 379 TLIN 368
           T+++
Sbjct: 399 TIVD 402



 Score = 65.1 bits (157), Expect = 4e-08
 Identities = 38/115 (33%), Positives = 55/115 (47%)
 Frame = -3

Query: 712 DCVLYTVIIDHLCKIGSVEMARSIFHDMVEQGIAPDVVCYNALISGFCKAFRVSEAMHLY 533
           D V Y  II  LC     + A  +F +M  +GI PDVV +  LI  F +    + A  L 
Sbjct: 323 DVVSYNTIIKALCTASHTKRAYKLFEEMGGKGITPDVVTFTILIKAFLREGSSNIAKKLL 382

Query: 532 EEMQNRGLYPDELTFKLIIGGLIREKNFSLAYGVWDRMMEKGFTLDRDISETLIN 368
           ++M   GL PD + +  I+  L +     +A+ V+  M+E G T D      LIN
Sbjct: 383 DQMTGLGLLPDRVLYTTIVDHLCKTGKMGMAHSVFCDMVESGITPDVVSYNALIN 437



 Score = 58.9 bits (141), Expect = 3e-06
 Identities = 32/114 (28%), Positives = 56/114 (49%)
 Frame = -3

Query: 703 LYTVIIDHLCKIGSVEMARSIFHDMVEQGIAPDVVCYNALISGFCKAFRVSEAMHLYEEM 524
           +Y  +I+  C+ G ++ A+SI   M   G  PD+V YN L++  C    + EA +L ++M
Sbjct: 221 IYNSLINGFCQAGWIDKAQSIISFMRRNGCEPDLVTYNVLLNYCCDELLLEEAENLMKKM 280

Query: 523 QNRGLYPDELTFKLIIGGLIREKNFSLAYGVWDRMMEKGFTLDRDISETLINVI 362
           +  G+ PD  ++  ++ GL +      AY +    ME     D     T+I  +
Sbjct: 281 ERSGVEPDVYSYNELLKGLCKANRLDKAYMMMVNKMEAKGLCDVVSYNTIIKAL 334


>ref|XP_008340122.1| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
           mitochondrial-like [Malus domestica]
          Length = 515

 Score =  181 bits (459), Expect = 4e-43
 Identities = 88/133 (66%), Positives = 105/133 (78%)
 Frame = -3

Query: 742 DQMINMGKSPDCVLYTVIIDHLCKIGSVEMARSIFHDMVEQGIAPDVVCYNALISGFCKA 563
           DQM  MG  PD + YT I+DHLCK G++EMA S+F +M+E+GI PDV+ YNALI+G  KA
Sbjct: 383 DQMTAMGLLPDRIFYTTIVDHLCKSGNIEMACSVFSEMLEKGITPDVISYNALINGLLKA 442

Query: 562 FRVSEAMHLYEEMQNRGLYPDELTFKLIIGGLIREKNFSLAYGVWDRMMEKGFTLDRDIS 383
            +VS+AMHLYEEMQ RG   DE+TFKLIIGGLIRE   S+A  VWD+MMEKGFTLD   S
Sbjct: 443 SKVSDAMHLYEEMQTRGCSADEVTFKLIIGGLIRENKVSVACRVWDQMMEKGFTLDGAFS 502

Query: 382 ETLINVINSKDAS 344
           ETL+N INSKDA+
Sbjct: 503 ETLVNAINSKDAA 515



 Score = 72.8 bits (177), Expect = 2e-10
 Identities = 38/119 (31%), Positives = 61/119 (51%)
 Frame = -3

Query: 724 GKSPDCVLYTVIIDHLCKIGSVEMARSIFHDMVEQGIAPDVVCYNALISGFCKAFRVSEA 545
           G  PD   Y  ++  LCK    + A  +    +E     +VV YN +I+ FCKA R   A
Sbjct: 284 GMEPDVYSYNQLLMGLCKANRPDKAYLLMRTRMEPKGLCNVVSYNTIITAFCKASRTGSA 343

Query: 544 MHLYEEMQNRGLYPDELTFKLIIGGLIREKNFSLAYGVWDRMMEKGFTLDRDISETLIN 368
             L+EEM+++G  PD +TF ++I   +RE +  +   + D+M   G   DR    T+++
Sbjct: 344 YKLFEEMRHKGTVPDLVTFTILINAFLREGSSDIVKKLLDQMTAMGLLPDRIFYTTIVD 402



 Score = 70.9 bits (172), Expect = 8e-10
 Identities = 36/123 (29%), Positives = 61/123 (49%)
 Frame = -3

Query: 739 QMINMGKSPDCVLYTVIIDHLCKIGSVEMARSIFHDMVEQGIAPDVVCYNALISGFCKAF 560
           +M+  G S D   Y+  I  LCKI +  +   +  DM   G  PD+  +N  ++  C+  
Sbjct: 69  EMVPKGFSLDPFTYSRFISGLCKIRNFTLIEKLLRDMDRIGALPDIWAFNIYLNLLCQEN 128

Query: 559 RVSEAMHLYEEMQNRGLYPDELTFKLIIGGLIREKNFSLAYGVWDRMMEKGFTLDRDISE 380
               A+ L+  M ++G  PD +++ +II GL +   F +A  +W+ M+ KGF  D     
Sbjct: 129 GTDFALELFHRMVDKGREPDVVSYTIIIDGLCKAGQFDMAVDIWNGMIRKGFRPDNIACT 188

Query: 379 TLI 371
            L+
Sbjct: 189 ALV 191



 Score = 70.9 bits (172), Expect = 8e-10
 Identities = 42/125 (33%), Positives = 62/125 (49%), Gaps = 1/125 (0%)
 Frame = -3

Query: 739 QMINMGKSPDCVLYTVIIDHLCKIGSVEMARSIFHDMVEQGIAPDVVCYNALISGFCKAF 560
           +M++ G+ PD V YT+IID LCK G  +MA  I++ M+ +G  PD +   AL+ G CK  
Sbjct: 139 RMVDKGREPDVVSYTIIIDGLCKAGQFDMAVDIWNGMIRKGFRPDNIACTALVVGLCKGG 198

Query: 559 RVSEAMHL-YEEMQNRGLYPDELTFKLIIGGLIREKNFSLAYGVWDRMMEKGFTLDRDIS 383
           +V  A  L  +EM+ R +    L +  +I G  R      A  +   M   G   D    
Sbjct: 199 KVDLAYDLVIDEMKGR-INFSSLIYNALISGFCRAGRIDKAQAIKSFMKRNGCEPDLVSH 257

Query: 382 ETLIN 368
             L+N
Sbjct: 258 NVLLN 262



 Score = 66.6 bits (161), Expect = 1e-08
 Identities = 32/100 (32%), Positives = 52/100 (52%)
 Frame = -3

Query: 736 MINMGKSPDCVLYTVIIDHLCKIGSVEMARSIFHDMVEQGIAPDVVCYNALISGFCKAFR 557
           M  +G  PD   + + ++ LC+    + A  +FH MV++G  PDVV Y  +I G CKA +
Sbjct: 105 MDRIGALPDIWAFNIYLNLLCQENGTDFALELFHRMVDKGREPDVVSYTIIIDGLCKAGQ 164

Query: 556 VSEAMHLYEEMQNRGLYPDELTFKLIIGGLIREKNFSLAY 437
              A+ ++  M  +G  PD +    ++ GL +     LAY
Sbjct: 165 FDMAVDIWNGMIRKGFRPDNIACTALVVGLCKGGKVDLAY 204



 Score = 58.9 bits (141), Expect = 3e-06
 Identities = 29/98 (29%), Positives = 52/98 (53%)
 Frame = -3

Query: 706 VLYTVIIDHLCKIGSVEMARSIFHDMVEQGIAPDVVCYNALISGFCKAFRVSEAMHLYEE 527
           ++Y  +I   C+ G ++ A++I   M   G  PD+V +N L++  C AF + EA  L ++
Sbjct: 220 LIYNALISGFCRAGRIDKAQAIKSFMKRNGCEPDLVSHNVLLNYCCNAFMLEEAEKLMKK 279

Query: 526 MQNRGLYPDELTFKLIIGGLIREKNFSLAYGVWDRMME 413
           M+  G+ PD  ++  ++ GL +      AY +    ME
Sbjct: 280 MERGGMEPDVYSYNQLLMGLCKANRPDKAYLLMRTRME 317


>gb|KHG22195.1| hypothetical protein F383_00597 [Gossypium arboreum]
          Length = 325

 Score =  181 bits (458), Expect = 5e-43
 Identities = 87/131 (66%), Positives = 104/131 (79%)
 Frame = -3

Query: 742 DQMINMGKSPDCVLYTVIIDHLCKIGSVEMARSIFHDMVEQGIAPDVVCYNALISGFCKA 563
           D+M   G  PDC+ YT IIDHLCK G VE A S+F+DM+ QG+ PDV+ YNALI+GFCK+
Sbjct: 193 DRMSGKGLLPDCIFYTTIIDHLCKRGKVETACSVFNDMIIQGVGPDVISYNALINGFCKS 252

Query: 562 FRVSEAMHLYEEMQNRGLYPDELTFKLIIGGLIREKNFSLAYGVWDRMMEKGFTLDRDIS 383
            RV+EA+HLYEEMQ++G  PDE TFKLIIGGLI EK  S A  VW++MMEKGFTLDR +S
Sbjct: 253 KRVTEAIHLYEEMQSKGFSPDETTFKLIIGGLICEKKLSEACQVWEQMMEKGFTLDRAVS 312

Query: 382 ETLINVINSKD 350
           ETLIN I+S D
Sbjct: 313 ETLINAIHSID 323



 Score = 63.5 bits (153), Expect = 1e-07
 Identities = 36/124 (29%), Positives = 60/124 (48%)
 Frame = -3

Query: 739 QMINMGKSPDCVLYTVIIDHLCKIGSVEMARSIFHDMVEQGIAPDVVCYNALISGFCKAF 560
           +M   G   D   Y  +I  LC     + A  +  + +E   + D V YN +I  FCK  
Sbjct: 89  KMERSGIRRDVYSYNQMIKGLCNTNKPDKAYLLMVNKMEADGSVDAVSYNTVIKAFCKDS 148

Query: 559 RVSEAMHLYEEMQNRGLYPDELTFKLIIGGLIREKNFSLAYGVWDRMMEKGFTLDRDISE 380
            + +A +L+E+M  +G+ PD +TF  +I   + + +  +A  + DRM  KG   D     
Sbjct: 149 HIGKAYNLFEDMDRKGIAPDVVTFTTLIKNFLNKGSSGIAKTLLDRMSGKGLLPDCIFYT 208

Query: 379 TLIN 368
           T+I+
Sbjct: 209 TIID 212


>ref|XP_007159689.1| hypothetical protein PHAVU_002G258900g [Phaseolus vulgaris]
           gi|561033104|gb|ESW31683.1| hypothetical protein
           PHAVU_002G258900g [Phaseolus vulgaris]
          Length = 518

 Score =  181 bits (458), Expect = 5e-43
 Identities = 82/133 (61%), Positives = 103/133 (77%)
 Frame = -3

Query: 742 DQMINMGKSPDCVLYTVIIDHLCKIGSVEMARSIFHDMVEQGIAPDVVCYNALISGFCKA 563
           D+M  +G  PD + YT ++DHLCK G V+ A S+F DMVE G+ PDV+ YNAL++GFCKA
Sbjct: 386 DEMTRLGILPDRIFYTAVVDHLCKTGKVDTADSVFRDMVENGVNPDVISYNALVNGFCKA 445

Query: 562 FRVSEAMHLYEEMQNRGLYPDELTFKLIIGGLIREKNFSLAYGVWDRMMEKGFTLDRDIS 383
            RV +AM LY+EMQ  GLYPDE+TFKLI+GGLIR K  SLA  VWD+MMEKG TLD+ +S
Sbjct: 446 SRVMDAMRLYDEMQRNGLYPDEVTFKLIVGGLIRGKKLSLACRVWDQMMEKGLTLDKHLS 505

Query: 382 ETLINVINSKDAS 344
           ETL+N I S+D +
Sbjct: 506 ETLVNAIQSRDGA 518



 Score = 68.9 bits (167), Expect = 3e-09
 Identities = 37/117 (31%), Positives = 56/117 (47%)
 Frame = -3

Query: 742 DQMINMGKSPDCVLYTVIIDHLCKIGSVEMARSIFHDMVEQGIAPDVVCYNALISGFCKA 563
           + M   G  PD   Y  ++   CK   V+ A  +  + ++     DVV YN LI+ FCK 
Sbjct: 281 ETMERSGVEPDFYSYNELLKCFCKANMVDRAYLMLVERMQTKGMCDVVSYNTLITAFCKV 340

Query: 562 FRVSEAMHLYEEMQNRGLYPDELTFKLIIGGLIREKNFSLAYGVWDRMMEKGFTLDR 392
            R      L+EEM  +G+ PD +TF ++I   +RE +  +   + D M   G   DR
Sbjct: 341 RRTRRGYELFEEMCGKGIRPDMVTFNILIDAFLREGSIQVVKKLLDEMTRLGILPDR 397



 Score = 61.6 bits (148), Expect = 5e-07
 Identities = 34/120 (28%), Positives = 57/120 (47%)
 Frame = -3

Query: 727 MGKSPDCVLYTVIIDHLCKIGSVEMARSIFHDMVEQGIAPDVVCYNALISGFCKAFRVSE 548
           +G  PD   +   +  LC+   +E A  +FH M  +G  PDVV Y  ++   CKA R  E
Sbjct: 111 LGFVPDIWAFNTYLSFLCRHNRLETALELFHSMPSEGREPDVVSYTIIVDALCKAQRYDE 170

Query: 547 AMHLYEEMQNRGLYPDELTFKLIIGGLIREKNFSLAYGVWDRMMEKGFTLDRDISETLIN 368
           A  ++  +  +GL PD      ++ GL       LAY +   +++ G  ++  +   LI+
Sbjct: 171 AARVWRGLTGKGLSPDFKACVALVVGLCGGGRVDLAYELVVGVIKGGVKVNILVYNALID 230



 Score = 58.2 bits (139), Expect = 5e-06
 Identities = 38/150 (25%), Positives = 63/150 (42%), Gaps = 35/150 (23%)
 Frame = -3

Query: 736 MINMGKSPDCVLYTVIIDHLCKIGSVEMARSIFHDMVEQGIAPD---------------- 605
           M + G+ PD V YT+I+D LCK    + A  ++  +  +G++PD                
Sbjct: 143 MPSEGREPDVVSYTIIVDALCKAQRYDEAARVWRGLTGKGLSPDFKACVALVVGLCGGGR 202

Query: 604 -------------------VVCYNALISGFCKAFRVSEAMHLYEEMQNRGLYPDELTFKL 482
                              ++ YNALI GFC+  RV +AM +   M   G  PD +T+  
Sbjct: 203 VDLAYELVVGVIKGGVKVNILVYNALIDGFCRMGRVDKAMKIKAFMSRNGCVPDLVTYNT 262

Query: 481 IIGGLIREKNFSLAYGVWDRMMEKGFTLDR 392
           ++       N+    G+ D  +    T++R
Sbjct: 263 LL-------NYCCDEGMLDEALRLVETMER 285



 Score = 57.4 bits (137), Expect = 9e-06
 Identities = 33/111 (29%), Positives = 55/111 (49%), Gaps = 1/111 (0%)
 Frame = -3

Query: 736 MINMGKSPDCVLYTVIIDHLCKIGSVEMARSIFHDMVEQGIAPDVVCYNALISGFCKAFR 557
           +I  G   + ++Y  +ID  C++G V+ A  I   M   G  PD+V YN L++  C    
Sbjct: 213 VIKGGVKVNILVYNALIDGFCRMGRVDKAMKIKAFMSRNGCVPDLVTYNTLLNYCCDEGM 272

Query: 556 VSEAMHLYEEMQNRGLYPDELTFKLIIGGLIREKNFSLAY-GVWDRMMEKG 407
           + EA+ L E M+  G+ PD  ++  ++    +      AY  + +RM  KG
Sbjct: 273 LDEALRLVETMERSGVEPDFYSYNELLKCFCKANMVDRAYLMLVERMQTKG 323