BLASTX nr result

ID: Forsythia21_contig00013423 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Forsythia21_contig00013423
         (392 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011090831.1| PREDICTED: pentatricopeptide repeat-containi...    85   2e-14
ref|XP_012827854.1| PREDICTED: pentatricopeptide repeat-containi...    83   6e-14
emb|CDO98970.1| unnamed protein product [Coffea canephora]             75   2e-11
ref|XP_009594085.1| PREDICTED: pentatricopeptide repeat-containi...    72   1e-10
ref|XP_009783093.1| PREDICTED: pentatricopeptide repeat-containi...    69   9e-10
ref|XP_006339424.1| PREDICTED: pentatricopeptide repeat-containi...    64   4e-08
ref|XP_004229464.1| PREDICTED: pentatricopeptide repeat-containi...    64   5e-08
gb|KDO74901.1| hypothetical protein CISIN_1g045814mg, partial [C...    57   5e-06

>ref|XP_011090831.1| PREDICTED: pentatricopeptide repeat-containing protein At5g18950
           [Sesamum indicum]
          Length = 640

 Score = 85.1 bits (209), Expect = 2e-14
 Identities = 51/134 (38%), Positives = 66/134 (49%), Gaps = 40/134 (29%)
 Frame = +2

Query: 110 MGKSPLFFTNFCLRKSLKPVQNTKPQIRIPNRNLCVNRIDGKYEEIGKNSQNPDVVFAQ- 286
           M + P FF+N CLR++ K ++   PQIR  NRNL +++ +G  EE+ +  Q PD +FAQ 
Sbjct: 1   MARIPSFFSNLCLRQNPKSLRAITPQIR--NRNLSLDQFNGNSEELAQQPQKPDEIFAQN 58

Query: 287 ---------------------------------------EISKVIQTRPRWEQTLLSDIP 349
                                                  E+SK I +RPRWEQTLLSD P
Sbjct: 59  RIFPLNETSRLSEELMQNPQKPDEKFAQNQISTVSEIAKEVSKFILSRPRWEQTLLSDFP 118

Query: 350 GVNFVDPNVYNEVL 391
            VNF DP VY  VL
Sbjct: 119 TVNFADPAVYKAVL 132


>ref|XP_012827854.1| PREDICTED: pentatricopeptide repeat-containing protein At5g18950
           [Erythranthe guttatus]
          Length = 680

 Score = 83.2 bits (204), Expect = 6e-14
 Identities = 48/119 (40%), Positives = 67/119 (56%), Gaps = 23/119 (19%)
 Frame = +2

Query: 104 IQMGKSPLFFTNFCLRKSLKPVQNTKPQIRIPNRNLCVNRIDGK---------------- 235
           + M + P F +N CLR++ K +Q T PQIR  +RNL V++ +G                 
Sbjct: 57  LAMARIPSFLSNLCLRQNPKSLQPTTPQIR--SRNLSVDQFNGNPDEISAQNRIFNLVEP 114

Query: 236 ---YEEIGKNSQNPDVV----FAQEISKVIQTRPRWEQTLLSDIPGVNFVDPNVYNEVL 391
               EE+G+N     +      A+E+S +I+ RPRWEQTLL+D P VNF DP VY+EVL
Sbjct: 115 NRSSEELGENYAQHQITSVNEIAKEVSNLIRIRPRWEQTLLTDFPTVNFTDPTVYSEVL 173


>emb|CDO98970.1| unnamed protein product [Coffea canephora]
          Length = 615

 Score = 75.1 bits (183), Expect = 2e-11
 Identities = 42/105 (40%), Positives = 58/105 (55%), Gaps = 11/105 (10%)
 Frame = +2

Query: 110 MGKSPLFFTNFCLRKSLKP-VQNTKPQIRIPNRNLC----------VNRIDGKYEEIGKN 256
           MG+ P FFTN C+R++     QN   QIR  N +            V  +D    +I   
Sbjct: 1   MGRPPSFFTNLCIRRTPNTHFQNPNSQIRNRNNSNTSKSSAGNGEFVQNLDANVVKIHDF 60

Query: 257 SQNPDVVFAQEISKVIQTRPRWEQTLLSDIPGVNFVDPNVYNEVL 391
                   A+ +SK+I++RPRWE+T+LS+ P VNFVDP+ YNEVL
Sbjct: 61  KPQGFTEIAKAVSKIIRSRPRWEETILSEFPTVNFVDPSFYNEVL 105


>ref|XP_009594085.1| PREDICTED: pentatricopeptide repeat-containing protein At5g18950
           [Nicotiana tomentosiformis]
           gi|697170340|ref|XP_009594086.1| PREDICTED:
           pentatricopeptide repeat-containing protein At5g18950
           [Nicotiana tomentosiformis]
           gi|697170342|ref|XP_009594087.1| PREDICTED:
           pentatricopeptide repeat-containing protein At5g18950
           [Nicotiana tomentosiformis]
          Length = 604

 Score = 72.0 bits (175), Expect = 1e-10
 Identities = 42/100 (42%), Positives = 55/100 (55%), Gaps = 6/100 (6%)
 Frame = +2

Query: 110 MGKSPLFFTNFCLRKSLKPVQNTKPQIRIPNRN------LCVNRIDGKYEEIGKNSQNPD 271
           M + P F T+ C R S  P++N    + I   N      +     D    E  +N+Q   
Sbjct: 1   MARPPFFVTSLCTRNS--PIRN----LSIAGTNSGIEGEVAAQDPDQSSPENHQNAQQSF 54

Query: 272 VVFAQEISKVIQTRPRWEQTLLSDIPGVNFVDPNVYNEVL 391
           V  A+++ KVI+TRPRWEQTLLSD P VNF+DP  Y EVL
Sbjct: 55  VEIAKDVCKVIRTRPRWEQTLLSDFPTVNFIDPRFYTEVL 94


>ref|XP_009783093.1| PREDICTED: pentatricopeptide repeat-containing protein At5g18950
           [Nicotiana sylvestris] gi|698467232|ref|XP_009783094.1|
           PREDICTED: pentatricopeptide repeat-containing protein
           At5g18950 [Nicotiana sylvestris]
          Length = 604

 Score = 69.3 bits (168), Expect = 9e-10
 Identities = 40/100 (40%), Positives = 54/100 (54%), Gaps = 6/100 (6%)
 Frame = +2

Query: 110 MGKSPLFFTNFCLRKSLKPVQNTKPQIRIPNRN------LCVNRIDGKYEEIGKNSQNPD 271
           M + P F T+ C R S  P++N    + I   N      +     D    E  +++Q   
Sbjct: 1   MARPPFFITSLCTRNS--PIRN----LSIAGTNSGIEGEVAAQNPDQSSSENHQSAQQSF 54

Query: 272 VVFAQEISKVIQTRPRWEQTLLSDIPGVNFVDPNVYNEVL 391
           V  A+++ KVI+TRPRWEQTLLSD P VNF DP  Y EV+
Sbjct: 55  VEIAKDVCKVIRTRPRWEQTLLSDFPTVNFTDPRFYTEVV 94


>ref|XP_006339424.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g18950-like [Solanum tuberosum]
          Length = 601

 Score = 63.9 bits (154), Expect = 4e-08
 Identities = 37/101 (36%), Positives = 52/101 (51%), Gaps = 7/101 (6%)
 Frame = +2

Query: 110 MGKSPLFFTNFCLRKSLK-PVQNTKPQIRIPNRN------LCVNRIDGKYEEIGKNSQNP 268
           M + P F T+ C R+++  P++N    + I   N      +     D       ++ Q  
Sbjct: 1   MARPPFFVTSLCTRQNVSSPIRN----LSIAGSNGGVEGEVATQNADRSSSVNHQSEQQS 56

Query: 269 DVVFAQEISKVIQTRPRWEQTLLSDIPGVNFVDPNVYNEVL 391
               A+++ KVI+TRPRWEQ LLSD P VNF DP  Y EVL
Sbjct: 57  FAEIAKDVCKVIRTRPRWEQILLSDFPTVNFTDPRFYTEVL 97


>ref|XP_004229464.1| PREDICTED: pentatricopeptide repeat-containing protein At5g18950
           [Solanum lycopersicum] gi|723658906|ref|XP_010322824.1|
           PREDICTED: pentatricopeptide repeat-containing protein
           At5g18950 [Solanum lycopersicum]
           gi|723658909|ref|XP_010322828.1| PREDICTED:
           pentatricopeptide repeat-containing protein At5g18950
           [Solanum lycopersicum]
          Length = 601

 Score = 63.5 bits (153), Expect = 5e-08
 Identities = 39/107 (36%), Positives = 52/107 (48%), Gaps = 13/107 (12%)
 Frame = +2

Query: 110 MGKSPLFFTNFCLRKSLKPVQNTKPQIRIPNRNLCVNRIDGKYE----------EIGKNS 259
           M + P F  + C R++             P RNL +   +G+ E              N 
Sbjct: 1   MARPPFFVRSLCTRQNFNS----------PIRNLSIAGTNGRVEGEVAAQNADRSSSVNH 50

Query: 260 QNPDVVFAQ---EISKVIQTRPRWEQTLLSDIPGVNFVDPNVYNEVL 391
           Q+  + FA+   ++ KVI+TRPRWEQ LLSD P VNF DP  Y EVL
Sbjct: 51  QSEQLSFAEIAKDVCKVIRTRPRWEQILLSDFPTVNFTDPRFYTEVL 97


>gb|KDO74901.1| hypothetical protein CISIN_1g045814mg, partial [Citrus sinensis]
          Length = 427

 Score = 57.0 bits (136), Expect = 5e-06
 Identities = 36/94 (38%), Positives = 50/94 (53%)
 Frame = +2

Query: 110 MGKSPLFFTNFCLRKSLKPVQNTKPQIRIPNRNLCVNRIDGKYEEIGKNSQNPDVVFAQE 289
           MG++P F     LR++ +  QN   Q+R    NL +           K SQ      A++
Sbjct: 1   MGRAP-FSVLTILRQNPRNFQNPNTQLR----NLSIET---------KESQQLYTEIAKQ 46

Query: 290 ISKVIQTRPRWEQTLLSDIPGVNFVDPNVYNEVL 391
           + K+ +T+PRWEQTLLSDIP  NF DP  + E L
Sbjct: 47  VCKITRTKPRWEQTLLSDIPSFNFNDPLFFREFL 80


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