BLASTX nr result

ID: Forsythia21_contig00013010 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Forsythia21_contig00013010
         (357 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006292816.1| hypothetical protein CARUB_v10019065mg [Caps...    59   1e-06
emb|CAA65072.1| polygalacturonase [Brassica napus] gi|1403141|em...    57   5e-06
ref|XP_010427630.1| PREDICTED: polygalacturonase ADPG1-like [Cam...    57   5e-06
ref|XP_010516364.1| PREDICTED: polygalacturonase ADPG1-like [Cam...    57   5e-06
ref|XP_010504680.1| PREDICTED: polygalacturonase ADPG1 [Camelina...    57   5e-06
ref|XP_009104062.1| PREDICTED: polygalacturonase ADPG1 [Brassica...    57   5e-06
ref|XP_002878158.1| endo-polygalacturonase 1 [Arabidopsis lyrata...    57   6e-06
emb|CDP18643.1| unnamed protein product [Coffea canephora]             56   8e-06

>ref|XP_006292816.1| hypothetical protein CARUB_v10019065mg [Capsella rubella]
           gi|482561523|gb|EOA25714.1| hypothetical protein
           CARUB_v10019065mg [Capsella rubella]
          Length = 433

 Score = 58.9 bits (141), Expect = 1e-06
 Identities = 25/37 (67%), Positives = 28/37 (75%)
 Frame = +2

Query: 2   KYPCQGIVLQNVNLGSAKAECNNVNFKNIGTVAPHCS 112
           KYPCQGIVL+NVN+   KA C N N KN GTV+P CS
Sbjct: 397 KYPCQGIVLENVNIKGGKASCKNANVKNQGTVSPKCS 433


>emb|CAA65072.1| polygalacturonase [Brassica napus] gi|1403141|emb|CAA67020.1|
           endo-polygalacturonidase [Brassica napus]
          Length = 433

 Score = 57.0 bits (136), Expect = 5e-06
 Identities = 24/36 (66%), Positives = 28/36 (77%)
 Frame = +2

Query: 2   KYPCQGIVLQNVNLGSAKAECNNVNFKNIGTVAPHC 109
           KYPCQGIVL+NVN+   KA C NVN K+ GTV+P C
Sbjct: 397 KYPCQGIVLENVNIKGGKASCENVNVKDKGTVSPKC 432


>ref|XP_010427630.1| PREDICTED: polygalacturonase ADPG1-like [Camelina sativa]
          Length = 432

 Score = 57.0 bits (136), Expect = 5e-06
 Identities = 24/37 (64%), Positives = 27/37 (72%)
 Frame = +2

Query: 2   KYPCQGIVLQNVNLGSAKAECNNVNFKNIGTVAPHCS 112
           KYPCQGIVL+NVN+    A C N N KN GTV+P CS
Sbjct: 396 KYPCQGIVLENVNIKGGNASCKNANVKNQGTVSPKCS 432


>ref|XP_010516364.1| PREDICTED: polygalacturonase ADPG1-like [Camelina sativa]
          Length = 432

 Score = 57.0 bits (136), Expect = 5e-06
 Identities = 24/37 (64%), Positives = 27/37 (72%)
 Frame = +2

Query: 2   KYPCQGIVLQNVNLGSAKAECNNVNFKNIGTVAPHCS 112
           KYPCQGIVL+NVN+    A C N N KN GTV+P CS
Sbjct: 396 KYPCQGIVLENVNIKGGNASCKNANVKNQGTVSPKCS 432


>ref|XP_010504680.1| PREDICTED: polygalacturonase ADPG1 [Camelina sativa]
          Length = 432

 Score = 57.0 bits (136), Expect = 5e-06
 Identities = 24/37 (64%), Positives = 27/37 (72%)
 Frame = +2

Query: 2   KYPCQGIVLQNVNLGSAKAECNNVNFKNIGTVAPHCS 112
           KYPCQGIVL+NVN+    A C N N KN GTV+P CS
Sbjct: 396 KYPCQGIVLENVNIKGGNASCKNANVKNQGTVSPKCS 432


>ref|XP_009104062.1| PREDICTED: polygalacturonase ADPG1 [Brassica rapa]
           gi|1419408|emb|CAA90272.1| Polygalacturonase [Brassica
           napus] gi|674965450|emb|CDX67693.1| BnaA07g17330D
           [Brassica napus]
          Length = 433

 Score = 57.0 bits (136), Expect = 5e-06
 Identities = 24/36 (66%), Positives = 28/36 (77%)
 Frame = +2

Query: 2   KYPCQGIVLQNVNLGSAKAECNNVNFKNIGTVAPHC 109
           KYPCQGIVL+NVN+   KA C NVN K+ GTV+P C
Sbjct: 397 KYPCQGIVLENVNIKGGKASCKNVNVKDKGTVSPKC 432


>ref|XP_002878158.1| endo-polygalacturonase 1 [Arabidopsis lyrata subsp. lyrata]
           gi|297323996|gb|EFH54417.1| endo-polygalacturonase 1
           [Arabidopsis lyrata subsp. lyrata]
          Length = 431

 Score = 56.6 bits (135), Expect = 6e-06
 Identities = 24/37 (64%), Positives = 27/37 (72%)
 Frame = +2

Query: 2   KYPCQGIVLQNVNLGSAKAECNNVNFKNIGTVAPHCS 112
           KYPCQGIVL+NVN+    A C N N KN GTV+P CS
Sbjct: 395 KYPCQGIVLENVNIKGGTASCKNANVKNQGTVSPKCS 431


>emb|CDP18643.1| unnamed protein product [Coffea canephora]
          Length = 452

 Score = 56.2 bits (134), Expect = 8e-06
 Identities = 25/41 (60%), Positives = 31/41 (75%), Gaps = 5/41 (12%)
 Frame = +2

Query: 5   YPCQGIVLQNVNL-----GSAKAECNNVNFKNIGTVAPHCS 112
           +PC+GIVLQNVNL     G+AKA CNNVN  N+G V+P C+
Sbjct: 412 FPCRGIVLQNVNLVGEGGGAAKASCNNVNLSNVGLVSPRCA 452


Top