BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Forsythia21_contig00012261
         (1816 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011096256.1| PREDICTED: RNA polymerase-associated protein...   674   0.0  
ref|XP_012849060.1| PREDICTED: protein RTF1 homolog [Erythranthe...   629   e-177
ref|XP_006347073.1| PREDICTED: RNA polymerase-associated protein...   545   e-171
ref|XP_010057458.1| PREDICTED: RNA polymerase-associated protein...   528   e-165
ref|XP_012455370.1| PREDICTED: RNA polymerase-associated protein...   522   e-165
gb|EYU27933.1| hypothetical protein MIMGU_mgv1a003121mg [Erythra...   585   e-164
ref|XP_003529309.1| PREDICTED: RNA polymerase-associated protein...   518   e-162
ref|XP_003542767.1| PREDICTED: RNA polymerase-associated protein...   514   e-161
ref|XP_007159299.1| hypothetical protein PHAVU_002G226300g [Phas...   509   e-158
ref|XP_010241126.1| PREDICTED: RNA polymerase-associated protein...   501   e-157
ref|XP_004505022.1| PREDICTED: protein RTF1 homolog [Cicer ariet...   502   e-156
ref|XP_009623037.1| PREDICTED: RNA polymerase-associated protein...   557   e-155
ref|XP_009799534.1| PREDICTED: RNA polymerase-associated protein...   554   e-155
emb|CDO99584.1| unnamed protein product [Coffea canephora]            552   e-154
gb|KEH31113.1| RNA polymerase-associated RTF1-like protein [Medi...   493   e-153
ref|XP_004232840.1| PREDICTED: RNA polymerase-associated protein...   542   e-151
ref|XP_004493842.1| PREDICTED: protein RTF1 homolog [Cicer ariet...   492   e-151
gb|EPS59875.1| hypothetical protein M569_14929 [Genlisea aurea]       536   e-149
ref|XP_002519028.1| RNA polymerase-associated protein RTF1, puta...   531   e-148
ref|XP_010646904.1| PREDICTED: RNA polymerase-associated protein...   528   e-147

>ref|XP_011096256.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Sesamum
            indicum]
          Length = 627

 Score =  674 bits (1738), Expect(2) = 0.0
 Identities = 356/466 (76%), Positives = 378/466 (81%)
 Frame = -1

Query: 1816 ERDSDDDSVGSDLYKDEDDREKLSKLTELEREMILEARATKRSDRDLTEKLKKRKGQDRK 1637
            ERDSD+DSVGSDLYKDEDDREKLSKLTELEREMILEARATKRSDRDLTEKLKKRKGQDRK
Sbjct: 93   ERDSDNDSVGSDLYKDEDDREKLSKLTELEREMILEARATKRSDRDLTEKLKKRKGQDRK 152

Query: 1636 GSQPTPPTRSSMRSKAQRAGALDELVKXXXXXXXXXXXXRYSPVKRRSFATATFNXXXXX 1457
            GS P   TR+ MRSKA+RAGALDELVK            RYSPVKRRSF  AT +     
Sbjct: 153  GSPPKAHTRN-MRSKAERAGALDELVKRRRDAAKGGSGSRYSPVKRRSFTAATLSSPSRS 211

Query: 1456 XXXXXXXXXXXXXXXGMADSDDEKMSESKTPTFEDIKEITIRRSKLAKWFMEPFFDELIV 1277
                            MADSDD+K SESK PT+EDI+EITIRRSKLAKWFMEPFFDELIV
Sbjct: 212  ESGSHSDGESTGDGG-MADSDDDKTSESKVPTYEDIREITIRRSKLAKWFMEPFFDELIV 270

Query: 1276 GCFVRVGIGKSRSGPIYRLCRVRNVDATDPDRQYKLDNKTTYKYLNVVWGNESSAARWQM 1097
            GCFVRVGIGKSRSGPIYRLC VRNVDATDPD+QYKLDNKTTYKYLNVVWGNE+SAARWQM
Sbjct: 271  GCFVRVGIGKSRSGPIYRLCVVRNVDATDPDKQYKLDNKTTYKYLNVVWGNETSAARWQM 330

Query: 1096 AMISDSSPLKEEFDQWVREVERSGGHMPSKQEVLEKRDAIQKTNTFVYSAATVKQMLQEK 917
            AMISDS P KEEFDQWVREVERSGGHMP+KQEVLEK++AIQKTN+FVYSAATVKQMLQEK
Sbjct: 331  AMISDSPPTKEEFDQWVREVERSGGHMPTKQEVLEKKEAIQKTNSFVYSAATVKQMLQEK 390

Query: 916  KSATWRPLNIAAEKDRLRRELEGAKMRDDEVEVERIKARLQELEVSRQTQEKDSKAIRLA 737
            KSATWRPLN+AAEKDRLRR LE AK  +DE EVER+KARLQELE SRQ QEKDSKA++LA
Sbjct: 391  KSATWRPLNVAAEKDRLRRALEVAKENEDEAEVERLKARLQELEASRQPQEKDSKAVKLA 450

Query: 736  EMNKRNRVENFKNASEKKPVNTGLKAGEAGYDPFSRRWTRSRNYYQSNPGGGEEAGDTNG 557
            EMN+RNRVENF+NASE KPVNT LKAGEAGYDPFSRRWTRSRNYY +N  GGE AG+TNG
Sbjct: 451  EMNRRNRVENFRNASELKPVNTSLKAGEAGYDPFSRRWTRSRNYYVANSNGGEAAGETNG 510

Query: 556  DVSAALEVANSNGGVPVXXXXXXXXXXXXXXXXXXXXXLVDTRAPV 419
            D SAAL    SNGG  V                     LVDT APV
Sbjct: 511  DASAAL--PGSNGGGRVSAEAGVAATAAALEAAAGAGKLVDTSAPV 554



 Score = 87.8 bits (216), Expect(2) = 0.0
 Identities = 42/45 (93%), Positives = 44/45 (97%)
 Frame = -2

Query: 378 GAQAGFMARKQRLEATVGCKVPENDGRRHALTLTVSDYKRRRGLL 244
           GAQAGFMARKQR+EAT+G KVPENDGRRHALTLTVSDYKRRRGLL
Sbjct: 583 GAQAGFMARKQRIEATLGVKVPENDGRRHALTLTVSDYKRRRGLL 627


>ref|XP_012849060.1| PREDICTED: protein RTF1 homolog [Erythranthe guttatus]
          Length = 623

 Score =  629 bits (1622), Expect = e-177
 Identities = 330/434 (76%), Positives = 358/434 (82%), Gaps = 8/434 (1%)
 Frame = -1

Query: 1816 ERDSDDDSVGSDLYKDEDDREKLSKLTELEREMILEARATKRSDRDLTEKLKKRKGQDRK 1637
            +RDSD+DSVGSDLYKDEDDREKLSKLTELEREMILEARATKRSDRDLTEKLKKRKGQDRK
Sbjct: 92   DRDSDNDSVGSDLYKDEDDREKLSKLTELEREMILEARATKRSDRDLTEKLKKRKGQDRK 151

Query: 1636 GSQPTPPTRSSMRSKAQRAGALDELVKXXXXXXXXXXXXRYSPVKRRSFA-----TATFN 1472
            GS P      +MRSKAQRAGALDELVK            RYSPVKRRSFA     T   +
Sbjct: 152  GSSPPKTHTRNMRSKAQRAGALDELVKRRRDAAKGGSGGRYSPVKRRSFAAAAATTTALS 211

Query: 1471 XXXXXXXXXXXXXXXXXXXXGMADSDDEKMSESKTPTFEDIKEITIRRSKLAKWFMEPFF 1292
                                G+ DSDD+K+S SK PTFEDIKEITIRRSKL+KWFMEPFF
Sbjct: 212  SPSRSDSGSHSDDGDSTGDGGLGDSDDDKVS-SKVPTFEDIKEITIRRSKLSKWFMEPFF 270

Query: 1291 DELIVGCFVRVGIGKSRSGPIYRLCRVRNVDATDPDRQYKLDNKTTYKYLNVVWGNESSA 1112
            DELIVGCFVRVGIGKSRSG IYRLC VRNVDATDPDR+YKLDNKTT K+LNVVWG+ESSA
Sbjct: 271  DELIVGCFVRVGIGKSRSGSIYRLCVVRNVDATDPDRKYKLDNKTTSKWLNVVWGSESSA 330

Query: 1111 ARWQMAMISDSSPLKEEFDQWVREVERSGGHMPSKQEVLEKRDAIQKTNTFVYSAATVKQ 932
            ARWQMAM+SDS+P +EEFDQWV+EVER+GGHMP+KQEV+EKRDAIQ+TNTFVYSAATVKQ
Sbjct: 331  ARWQMAMVSDSAPQREEFDQWVKEVERNGGHMPTKQEVMEKRDAIQRTNTFVYSAATVKQ 390

Query: 931  MLQEKKSATWRPLNIAAEKDRLRRELEGAKMRDDEVEVERIKARLQELEVSRQTQEKDSK 752
            MLQEKKSATWRPLN+AAEKDRLRR LE AK  +D+ EVERIKARLQELE SRQ  EK+SK
Sbjct: 391  MLQEKKSATWRPLNVAAEKDRLRRSLEVAKENEDDAEVERIKARLQELESSRQALEKNSK 450

Query: 751  AIRLAEMNKRNRVENFKNASEKKPVNTGLKAGEAGYDPFSRRWTRSRNYYQSNPGGGEEA 572
            A++LAEMN++NRVENFKNASE KPV  GLKAGEAGYDPFSRRWTRSRNYY  N GGG EA
Sbjct: 451  AVKLAEMNRKNRVENFKNASEMKPVTIGLKAGEAGYDPFSRRWTRSRNYYVGNSGGGVEA 510

Query: 571  G---DTNGDVSAAL 539
                +TNG   AAL
Sbjct: 511  EVAVETNGGGGAAL 524



 Score = 84.7 bits (208), Expect = 2e-13
 Identities = 40/45 (88%), Positives = 43/45 (95%)
 Frame = -2

Query: 378 GAQAGFMARKQRLEATVGCKVPENDGRRHALTLTVSDYKRRRGLL 244
           G QAGFMARKQR+EAT+G KVPENDGRRHALTL+VSDYKRRRGLL
Sbjct: 579 GTQAGFMARKQRIEATLGVKVPENDGRRHALTLSVSDYKRRRGLL 623


>ref|XP_006347073.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Solanum
            tuberosum]
          Length = 652

 Score =  545 bits (1403), Expect(2) = e-171
 Identities = 302/489 (61%), Positives = 352/489 (71%), Gaps = 25/489 (5%)
 Frame = -1

Query: 1810 DSDDDSVGSDLYKDEDDREKLSKLTELEREMILEARATKRSDRDLTEKLKKRKGQDRKGS 1631
            +SDDDS+GSDLYKD+DDR+KL+++TELEREMIL  RA K+SDR L +K+ K + Q RK S
Sbjct: 94   ESDDDSIGSDLYKDDDDRQKLAQMTELEREMILTDRAAKKSDRSLHDKMIKDRAQPRKQS 153

Query: 1630 QPTPPTRSSMRSK-------AQRAGALDEL--------------VKXXXXXXXXXXXXRY 1514
             P   +R  MRS        A R  AL+E+               K             Y
Sbjct: 154  SPPSHSRG-MRSSTRALDRAADRDDALNEIRAKRARQQQDPEGQFKLRDAARKGSGGRGY 212

Query: 1513 SPVKRRSFATATF-NXXXXXXXXXXXXXXXXXXXXGMADSDDEKMS-ESKTPTFEDIKEI 1340
            SP+KRRSF  AT  +                    GM DSDD+K S ES+ PTFEDIKEI
Sbjct: 213  SPIKRRSFTAATLGSSPTRGESDSHSNEGDSSADDGMDDSDDDKSSPESQLPTFEDIKEI 272

Query: 1339 TIRRSKLAKWFMEPFFDELIVGCFVRVGIGKSRSGPIYRLCRVRNVDATDPDRQYKLDNK 1160
            +IRRSKLAKWFMEPFFDELIVGCFVRVGIG+SRSGPIYRLC VRNVD++DP+RQYKL+NK
Sbjct: 273  SIRRSKLAKWFMEPFFDELIVGCFVRVGIGRSRSGPIYRLCVVRNVDSSDPNRQYKLENK 332

Query: 1159 TTYKYLNVVWGNESSAARWQMAMISDSSPLKEEFDQWVREVERSGGHMPSKQEVLEKRDA 980
            TT K+LNVVWGNE+SAARWQMAM+SDS PL++EFDQWVREVERSGG MPSKQ+VLEK++A
Sbjct: 333  TTSKFLNVVWGNENSAARWQMAMVSDSPPLRDEFDQWVREVERSGGRMPSKQDVLEKKEA 392

Query: 979  IQKTNTFVYSAATVKQMLQEKKSATWRPLNIAAEKDRLRRELEGAKMRDDEVEVERIKAR 800
            IQK+NTFVYSA TVKQMLQ+KKSATWRPLN+AAEKDRLRR++E AKM++DE EVERIKAR
Sbjct: 393  IQKSNTFVYSADTVKQMLQQKKSATWRPLNVAAEKDRLRRDMEVAKMKNDEAEVERIKAR 452

Query: 799  LQELEVSRQTQEKDSKAIRLAEMNKRNRVENFKNASEKKPVNTGLKAGEAGYDPFSRRWT 620
            LQEL+ SR+ QEKD KA RLAEMN++NRVENFKNASE +PVN  LKAG+AGYDPFSRRWT
Sbjct: 453  LQELDDSRKVQEKDDKARRLAEMNRKNRVENFKNASELRPVNQLLKAGQAGYDPFSRRWT 512

Query: 619  RSRNYYQSNPGGGEEA-GDTNGDVSAALEV-ANSNGGVPVXXXXXXXXXXXXXXXXXXXX 446
            RS NY+    G  EEA G +NG+V+AA  + A  N G                       
Sbjct: 513  RSTNYFAK--GANEEAEGASNGEVAAAAALAAEDNNGASGTADGGMAATAAALQAAAGAG 570

Query: 445  XLVDTRAPV 419
             LVDT APV
Sbjct: 571  KLVDTNAPV 579



 Score = 87.8 bits (216), Expect(2) = e-171
 Identities = 41/45 (91%), Positives = 43/45 (95%)
 Frame = -2

Query: 378 GAQAGFMARKQRLEATVGCKVPENDGRRHALTLTVSDYKRRRGLL 244
           G QAGFMARKQR+EATVGC VPENDGRRHALTL+VSDYKRRRGLL
Sbjct: 608 GGQAGFMARKQRIEATVGCSVPENDGRRHALTLSVSDYKRRRGLL 652


>ref|XP_010057458.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Eucalyptus
            grandis] gi|629109481|gb|KCW74627.1| hypothetical protein
            EUGRSUZ_E03353 [Eucalyptus grandis]
          Length = 653

 Score =  528 bits (1360), Expect(2) = e-165
 Identities = 293/489 (59%), Positives = 345/489 (70%), Gaps = 26/489 (5%)
 Frame = -1

Query: 1807 SDDDSVGSDLYKDEDDREKLSKLTELEREMILEARATKRSDRDLTEKLKKRKGQDRKGSQ 1628
            SD+  VGSDLYK+EDDR++L+KL+ELEREMIL  RA K +D+ + + L+K    DRK SQ
Sbjct: 96   SDESDVGSDLYKNEDDRQRLAKLSELEREMILAERAEKMTDKSMAKNLRK----DRKTSQ 151

Query: 1627 P---TPPTRSSMRSK---AQRAGALDELV-----------------KXXXXXXXXXXXXR 1517
                TPP  S  RS    A RA A DE +                 K             
Sbjct: 152  SRKETPPLASRGRSSSRSADRAAAKDEALNELRAKRLKQQDPEAHRKLRDGSRGGSGNRD 211

Query: 1516 YSPVKRRSF-ATATFNXXXXXXXXXXXXXXXXXXXXGMADSDDEK-MSESKTPTFEDIKE 1343
             S  KR++F A++  +                    G+ DSDD++ +  S+T  FED+KE
Sbjct: 212  LSSAKRKAFPASSLSSSSRSESESRSDSDDDASTGDGLVDSDDDRALLGSETLKFEDVKE 271

Query: 1342 ITIRRSKLAKWFMEPFFDELIVGCFVRVGIGKSRSG-PIYRLCRVRNVDATDPDRQYKLD 1166
            IT+RRSKL KWFMEPFF+ELIVGCFVRVGIG S+S  PIYRLC +RNVDA+DPDRQYKL+
Sbjct: 272  ITVRRSKLGKWFMEPFFEELIVGCFVRVGIGMSKSRQPIYRLCIIRNVDASDPDRQYKLE 331

Query: 1165 NKTTYKYLNVVWGNESSAARWQMAMISDSSPLKEEFDQWVREVERSGGHMPSKQEVLEKR 986
            NK TYKYLNVVWGNESSAARWQMAM+SDS PL+EEF+QWVREVERSGG MPSKQ+VLEK+
Sbjct: 332  NKMTYKYLNVVWGNESSAARWQMAMVSDSPPLEEEFNQWVREVERSGGRMPSKQDVLEKK 391

Query: 985  DAIQKTNTFVYSAATVKQMLQEKKSATWRPLNIAAEKDRLRRELEGAKMRDDEVEVERIK 806
            +AI+K NTFVYSAATVKQMLQEKKSA+ RP+NIAAEKDRLRRELE A+ ++DE EV+RIK
Sbjct: 392  EAIKKINTFVYSAATVKQMLQEKKSASSRPMNIAAEKDRLRRELEIAQYKEDEAEVKRIK 451

Query: 805  ARLQELEVSRQTQEKDSKAIRLAEMNKRNRVENFKNASEKKPVNTGLKAGEAGYDPFSRR 626
             +LQ+LE +RQ Q+ D+KAI+LAEMN++NRVENFKNASE KPVNTGLKAGEAGYDPFSRR
Sbjct: 452  EKLQQLEATRQAQKTDAKAIKLAEMNRKNRVENFKNASELKPVNTGLKAGEAGYDPFSRR 511

Query: 625  WTRSRNYYQSNPGGGEEAGDTNGDVSAALEVANSNGGVPVXXXXXXXXXXXXXXXXXXXX 446
            WTRSRNYY S P GG EAG  N +V+ A  VA SNG VPV                    
Sbjct: 512  WTRSRNYYVSKPNGGSEAGGANDNVNVASMVAESNGSVPVVSESGVVATVEALEAAADAG 571

Query: 445  XLVDTRAPV 419
             LVDT APV
Sbjct: 572  KLVDTNAPV 580



 Score = 84.3 bits (207), Expect(2) = e-165
 Identities = 39/45 (86%), Positives = 42/45 (93%)
 Frame = -2

Query: 378 GAQAGFMARKQRLEATVGCKVPENDGRRHALTLTVSDYKRRRGLL 244
           GA  GFM+RKQR+EATVGC+VPENDGRRH LTLTVSDYKRRRGLL
Sbjct: 609 GALTGFMSRKQRIEATVGCRVPENDGRRHILTLTVSDYKRRRGLL 653


>ref|XP_012455370.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Gossypium
            raimondii] gi|763802543|gb|KJB69481.1| hypothetical
            protein B456_011G025800 [Gossypium raimondii]
            gi|763802544|gb|KJB69482.1| hypothetical protein
            B456_011G025800 [Gossypium raimondii]
            gi|763802545|gb|KJB69483.1| hypothetical protein
            B456_011G025800 [Gossypium raimondii]
          Length = 660

 Score =  522 bits (1344), Expect(2) = e-165
 Identities = 289/494 (58%), Positives = 339/494 (68%), Gaps = 28/494 (5%)
 Frame = -1

Query: 1816 ERDSDDDS-VGSDLYKDEDDREKLSKLTELEREMILEARATKRSDRDLTEKLKKRKGQDR 1640
            ERDS D+S VG DLYK+E+DR +L++LTELEREMIL  RA KR D+  TEK++ ++  DR
Sbjct: 95   ERDSSDESDVGDDLYKNEEDRRQLAQLTELEREMILSERADKRGDKKFTEKIRSKRENDR 154

Query: 1639 --KGSQPTPP-----TRSSMRSKAQRAGALDELV-----------------KXXXXXXXX 1532
              +  + TPP      RSS RS A RA A D+ +                 K        
Sbjct: 155  PSRSQRETPPLPSRGVRSSARS-ADRAAAKDDALNELRAKRLKQQDPEAHRKLRDASRGS 213

Query: 1531 XXXXRYSPVKRRSFATATFNXXXXXXXXXXXXXXXXXXXXG--MADSDDEKMSESKT-PT 1361
                  SPVKR+ F  ++ +                       M DS+DE+ +     PT
Sbjct: 214  SGNRGLSPVKRKPFTASSLSSSSQSESESRSNSEDEGSTGDGGMVDSEDERGTWGPNGPT 273

Query: 1360 FEDIKEITIRRSKLAKWFMEPFFDELIVGCFVRVGIGKSRSGPIYRLCRVRNVDATDPDR 1181
            F DIKEITIRRSKLAKW MEPFF+ELIVGCFVRVGIG+S++G IYRLC VRNVDATDPDR
Sbjct: 274  FNDIKEITIRRSKLAKWLMEPFFEELIVGCFVRVGIGRSKTGAIYRLCMVRNVDATDPDR 333

Query: 1180 QYKLDNKTTYKYLNVVWGNESSAARWQMAMISDSSPLKEEFDQWVREVERSGGHMPSKQE 1001
             YKL+NKTTYKYLNVVWGNESSAARWQMAMISDS PL+EEF Q +REVERSGG MPSKQ+
Sbjct: 334  TYKLENKTTYKYLNVVWGNESSAARWQMAMISDSPPLEEEFRQLIREVERSGGRMPSKQD 393

Query: 1000 VLEKRDAIQKTNTFVYSAATVKQMLQEKKSATWRPLNIAAEKDRLRRELEGAKMRDDEVE 821
            VLEK++A+QK  TFVYSAATVKQMLQEKKS++ RPLN+AAEKDRLRR+LE A+ + D+VE
Sbjct: 394  VLEKKEALQKAKTFVYSAATVKQMLQEKKSSSSRPLNVAAEKDRLRRDLEIAQSKHDDVE 453

Query: 820  VERIKARLQELEVSRQTQEKDSKAIRLAEMNKRNRVENFKNASEKKPVNTGLKAGEAGYD 641
            VERIK RLQ+LE SRQ+QEKD+KA+RLAEMN++NRVENFKNAS  KPVNTGLKAGEAGYD
Sbjct: 454  VERIKKRLQQLEASRQSQEKDAKAVRLAEMNRKNRVENFKNASGLKPVNTGLKAGEAGYD 513

Query: 640  PFSRRWTRSRNYYQSNPGGGEEAGDTNGDVSAALEVANSNGGVPVXXXXXXXXXXXXXXX 461
            PFSRRWTRSRNYY +   GG+ A   NGD + A+   N N                    
Sbjct: 514  PFSRRWTRSRNYYNAKAPGGDAAAVANGDTNGAIGSGNGNDAGAAAAEAGRAATAAALQE 573

Query: 460  XXXXXXLVDTRAPV 419
                  LVDT APV
Sbjct: 574  AAGAGKLVDTNAPV 587



 Score = 89.0 bits (219), Expect(2) = e-165
 Identities = 42/45 (93%), Positives = 44/45 (97%)
 Frame = -2

Query: 378 GAQAGFMARKQRLEATVGCKVPENDGRRHALTLTVSDYKRRRGLL 244
           GA AGFMARKQR+EATVGC+VPENDGRRHALTLTVSDYKRRRGLL
Sbjct: 616 GAVAGFMARKQRIEATVGCRVPENDGRRHALTLTVSDYKRRRGLL 660


>gb|EYU27933.1| hypothetical protein MIMGU_mgv1a003121mg [Erythranthe guttata]
          Length = 606

 Score =  585 bits (1507), Expect = e-164
 Identities = 314/434 (72%), Positives = 341/434 (78%), Gaps = 8/434 (1%)
 Frame = -1

Query: 1816 ERDSDDDSVGSDLYKDEDDREKLSKLTELEREMILEARATKRSDRDLTEKLKKRKGQDRK 1637
            +RDSD+DSVGSDLYKDEDDREKLSKLTELEREMILEARATKRSDRDLTEKLKKRKGQDRK
Sbjct: 92   DRDSDNDSVGSDLYKDEDDREKLSKLTELEREMILEARATKRSDRDLTEKLKKRKGQDRK 151

Query: 1636 GSQPTPPTRSSMRSKAQRAGALDELVKXXXXXXXXXXXXRYSPVKRRSFA-----TATFN 1472
            GS P      +MRSKAQRAGALDELVK            RYSPVKRRSFA     T   +
Sbjct: 152  GSSPPKTHTRNMRSKAQRAGALDELVKRRRDAAKGGSGGRYSPVKRRSFAAAAATTTALS 211

Query: 1471 XXXXXXXXXXXXXXXXXXXXGMADSDDEKMSESKTPTFEDIKEITIRRSKLAKWFMEPFF 1292
                                G+ DSDD+K+S SK PTFEDIKEITIRRSKL+KWFMEPFF
Sbjct: 212  SPSRSDSGSHSDDGDSTGDGGLGDSDDDKVS-SKVPTFEDIKEITIRRSKLSKWFMEPFF 270

Query: 1291 DELIVGCFVRVGIGKSRSGPIYRLCRVRNVDATDPDRQYKLDNKTTYKYLNVVWGNESSA 1112
            DELIVGCFVRVGIGKSRSG IYRLC VRNVDATDPDR+YKLDNKTT K+LNVVWG+ESSA
Sbjct: 271  DELIVGCFVRVGIGKSRSGSIYRLCVVRNVDATDPDRKYKLDNKTTSKWLNVVWGSESSA 330

Query: 1111 ARWQMAMISDSSPLKEEFDQWVREVERSGGHMPSKQEVLEKRDAIQKTNTFVYSAATVKQ 932
            ARWQMAM+SDS+P +EEFDQWV+EVER+GGHMP+KQEV+EKRDAIQ+TNTFVYSAATVKQ
Sbjct: 331  ARWQMAMVSDSAPQREEFDQWVKEVERNGGHMPTKQEVMEKRDAIQRTNTFVYSAATVKQ 390

Query: 931  MLQEKKSATWRPLNIAAEKDRLRRELEGAKMRDDEVEVERIKARLQELEVSRQTQEKDSK 752
            MLQEKK                 R LE AK  +D+ EVERIKARLQELE SRQ  EK+SK
Sbjct: 391  MLQEKK-----------------RSLEVAKENEDDAEVERIKARLQELESSRQALEKNSK 433

Query: 751  AIRLAEMNKRNRVENFKNASEKKPVNTGLKAGEAGYDPFSRRWTRSRNYYQSNPGGGEEA 572
            A++LAEMN++NRVENFKNASE KPV  GLKAGEAGYDPFSRRWTRSRNYY  N GGG EA
Sbjct: 434  AVKLAEMNRKNRVENFKNASEMKPVTIGLKAGEAGYDPFSRRWTRSRNYYVGNSGGGVEA 493

Query: 571  G---DTNGDVSAAL 539
                +TNG   AAL
Sbjct: 494  EVAVETNGGGGAAL 507



 Score = 84.7 bits (208), Expect = 2e-13
 Identities = 40/45 (88%), Positives = 43/45 (95%)
 Frame = -2

Query: 378 GAQAGFMARKQRLEATVGCKVPENDGRRHALTLTVSDYKRRRGLL 244
           G QAGFMARKQR+EAT+G KVPENDGRRHALTL+VSDYKRRRGLL
Sbjct: 562 GTQAGFMARKQRIEATLGVKVPENDGRRHALTLSVSDYKRRRGLL 606


>ref|XP_003529309.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog isoform X1
            [Glycine max] gi|571466984|ref|XP_006583809.1| PREDICTED:
            RNA polymerase-associated protein RTF1 homolog isoform X2
            [Glycine max]
          Length = 656

 Score =  518 bits (1333), Expect(2) = e-162
 Identities = 284/488 (58%), Positives = 346/488 (70%), Gaps = 25/488 (5%)
 Frame = -1

Query: 1807 SDDDSVGSDLYKDEDDREKLSKLTELEREMILEARATKRSDRDLTEKL--KKRKGQDRKG 1634
            SD+ ++G DLYKDEDDR KLS++TEL+REMIL  RATK+ D++L  K+  K+ KG+    
Sbjct: 98   SDESNIGDDLYKDEDDRRKLSEMTELQREMILSDRATKKDDKNLLGKIASKREKGKVAVP 157

Query: 1633 SQPTPPTRSS-MRSKAQRAG------ALDELV------------KXXXXXXXXXXXXRYS 1511
             + +PP  SS MR+ A+ A       AL+EL             +             +S
Sbjct: 158  RKQSPPMSSSRMRASARSADRSAKNDALNELRAKRLKQQDPEAHRRLREASRNAGSRHFS 217

Query: 1510 PVKRRSFATATFNXXXXXXXXXXXXXXXXXXXXG--MADSDDEK-MSESKTPTFEDIKEI 1340
            P KR+ F + + +                       + DSDD++ ++ S+ P+F+D+KEI
Sbjct: 218  PPKRKPFTSTSLSSSSHSESESRSHSDDEGSTGDGGIVDSDDDRALAGSEGPSFQDVKEI 277

Query: 1339 TIRRSKLAKWFMEPFFDELIVGCFVRVGIGKSRSGPIYRLCRVRNVDATDPDRQYKLDNK 1160
            TIRRSKLAKWFMEPFF+ELIVGCFVRVGIG+S++GPIYRLC V+NVDA++PDRQYKL+NK
Sbjct: 278  TIRRSKLAKWFMEPFFEELIVGCFVRVGIGRSKTGPIYRLCMVKNVDASEPDRQYKLENK 337

Query: 1159 TTYKYLNVVWGNESSAARWQMAMISDSSPLKEEFDQWVREVERSGGHMPSKQEVLEKRDA 980
            TTYKYLNVVWGNESSAARWQMAM+SDS+PL+EEF QWV+EV+RSGG MPSKQ+VLEK+ A
Sbjct: 338  TTYKYLNVVWGNESSAARWQMAMVSDSAPLEEEFKQWVKEVDRSGGRMPSKQDVLEKKQA 397

Query: 979  IQKTNTFVYSAATVKQMLQEKKSATWRPLNIAAEKDRLRRELEGAKMRDDEVEVERIKAR 800
            IQK  TFVYSAATVKQMLQEKKSA+ RPLN+AAEKDRLRRELE A+ + DE EVERIK R
Sbjct: 398  IQKAITFVYSAATVKQMLQEKKSASTRPLNVAAEKDRLRRELEIAQSKYDEAEVERIKTR 457

Query: 799  LQELEVSRQTQEKDSKAIRLAEMNKRNRVENFKNASEKKPVNTGLKAGEAGYDPFSRRWT 620
            L ELE SRQ ++KD+KA++LAEMN++NR ENFKNASE KPVNTGLKAGEAGYDPFSRRWT
Sbjct: 458  LLELEASRQAKQKDAKALKLAEMNRKNRFENFKNASEMKPVNTGLKAGEAGYDPFSRRWT 517

Query: 619  RSRNYYQSNPGGGEEAGDTNGDVSAALEVANSNG-GVPVXXXXXXXXXXXXXXXXXXXXX 443
            RSRNYY + P  GE+A   N  V+  +  A SNG G PV                     
Sbjct: 518  RSRNYYAAKP--GEKAAAGNNSVNGNVAGAGSNGTGAPVTAEAGMVATAAALEAAAGAGK 575

Query: 442  LVDTRAPV 419
            LVDT APV
Sbjct: 576  LVDTSAPV 583



 Score = 83.2 bits (204), Expect(2) = e-162
 Identities = 40/45 (88%), Positives = 43/45 (95%)
 Frame = -2

Query: 378 GAQAGFMARKQRLEATVGCKVPENDGRRHALTLTVSDYKRRRGLL 244
           GAQAGFMARKQ++EATVG +V ENDGRRHALTLTVSDYKRRRGLL
Sbjct: 612 GAQAGFMARKQKIEATVGFRVSENDGRRHALTLTVSDYKRRRGLL 656


>ref|XP_003542767.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Glycine
            max]
          Length = 656

 Score =  514 bits (1325), Expect(2) = e-161
 Identities = 282/489 (57%), Positives = 347/489 (70%), Gaps = 26/489 (5%)
 Frame = -1

Query: 1807 SDDDSVGSDLYKDEDDREKLSKLTELEREMILEARATKRSDRDLTEKL--KKRKGQDRKG 1634
            SD+ ++G DLYKDEDDR KLS++TEL+REMIL  RATK+ D++L  K+  K+ KG+    
Sbjct: 98   SDESNIGDDLYKDEDDRRKLSEMTELQREMILSDRATKKDDKNLLGKIASKREKGKAAAP 157

Query: 1633 SQPTPPTRSS-MRSKAQRAG------ALDELV------------KXXXXXXXXXXXXRYS 1511
             + +PP  SS MR+ A+ A       AL+EL             +             +S
Sbjct: 158  RKQSPPMSSSRMRASARSADRSAKNDALNELRAKRLKQQDPEAHRRLREASRNAGPRHFS 217

Query: 1510 PVKRRSFATATFNXXXXXXXXXXXXXXXXXXXXG--MADSDDEK-MSESKTPTFEDIKEI 1340
            P KR++F + + +                       +ADSDD++ ++ S+ P+F+DIKEI
Sbjct: 218  PPKRKTFTSTSLSSSSHSESESRSHSDDEGSTGDGGIADSDDDRALAGSEGPSFQDIKEI 277

Query: 1339 TIRRSKLAKWFMEPFFDELIVGCFVRVGIGKSRSGPIYRLCRVRNVDATDPDRQYKLDNK 1160
            TIRRSKLAKWFMEPFF+ELIVGCFVRVGIG+S++GPIYRLC V+NVDA++PDRQYKL+NK
Sbjct: 278  TIRRSKLAKWFMEPFFEELIVGCFVRVGIGRSKTGPIYRLCMVKNVDASEPDRQYKLENK 337

Query: 1159 TTYKYLNVVWGNESSAARWQMAMISDSSPLKEEFDQWVREVERSGGHMPSKQEVLEKRDA 980
            TTYKYLNVVWGNESSAARWQMAM+SDS+P++EEF QWV+EV+ SGG MPSKQ+VLEK+ A
Sbjct: 338  TTYKYLNVVWGNESSAARWQMAMVSDSAPMEEEFKQWVKEVDCSGGRMPSKQDVLEKKQA 397

Query: 979  IQKTNTFVYSAATVKQMLQEKKSATWRPLNIAAEKDRLRRELEGAKMRDDEVEVERIKAR 800
            IQK  TFVYSAATVKQMLQEKKSA+ RPLN+AAEKDRLRRELE A+ + DE EVERIK R
Sbjct: 398  IQKAITFVYSAATVKQMLQEKKSASTRPLNVAAEKDRLRRELEIAQSKHDEAEVERIKTR 457

Query: 799  LQELEVSRQTQEKDSKAIRLAEMNKRNRVENFKNASEKKPVNTGLKAGEAGYDPFSRRWT 620
            LQELE SRQ ++KD+KA++LAEMN++NR ENFKNASE KPVN GLKAGEAGYDPFSRRWT
Sbjct: 458  LQELEASRQAKQKDAKALKLAEMNRKNRFENFKNASELKPVNIGLKAGEAGYDPFSRRWT 517

Query: 619  RSRNYYQSNPGGGEEAGD--TNGDVSAALEVANSNGGVPVXXXXXXXXXXXXXXXXXXXX 446
            RSRNYY + PG    AG+   NG+V+ A    ++  G PV                    
Sbjct: 518  RSRNYYAAKPGEKAAAGNNIVNGNVAGA---GSNATGAPVTAEAGMVATAAALEAAAGAG 574

Query: 445  XLVDTRAPV 419
             LVDT APV
Sbjct: 575  KLVDTSAPV 583



 Score = 83.2 bits (204), Expect(2) = e-161
 Identities = 40/45 (88%), Positives = 43/45 (95%)
 Frame = -2

Query: 378 GAQAGFMARKQRLEATVGCKVPENDGRRHALTLTVSDYKRRRGLL 244
           GAQAGFMARKQR+E+TVG +V ENDGRRHALTLTVSDYKRRRGLL
Sbjct: 612 GAQAGFMARKQRIESTVGFRVSENDGRRHALTLTVSDYKRRRGLL 656


>ref|XP_007159299.1| hypothetical protein PHAVU_002G226300g [Phaseolus vulgaris]
            gi|561032714|gb|ESW31293.1| hypothetical protein
            PHAVU_002G226300g [Phaseolus vulgaris]
          Length = 654

 Score =  509 bits (1311), Expect(2) = e-158
 Identities = 280/488 (57%), Positives = 343/488 (70%), Gaps = 25/488 (5%)
 Frame = -1

Query: 1807 SDDDSVGSDLYKDEDDREKLSKLTELEREMILEARATKRSDRDLTEKL--KKRKGQDRKG 1634
            SD+ ++G DLYKDEDDR KLS++TEL+REMIL  RATK+ D++L  K+  K+ KG+    
Sbjct: 99   SDESNIGDDLYKDEDDRRKLSEMTELQREMILSDRATKKDDKNLLGKIASKREKGKVSVP 158

Query: 1633 SQPTPPTRSS-MRSKAQRAG------ALDELV------------KXXXXXXXXXXXXRYS 1511
             + +PP  SS MR+ A+ A       AL+EL             +             +S
Sbjct: 159  RKQSPPMSSSRMRASARSADRSAKNDALNELRAKRLKQQDPEAHRKLREASRNAGPRHFS 218

Query: 1510 PVKRRSFATATFNXXXXXXXXXXXXXXXXXXXXG--MADSDDEK-MSESKTPTFEDIKEI 1340
            P KR+ F + + +                       + DSDD++ ++ S+ P+F+DIKEI
Sbjct: 219  PPKRKPFTSTSLSSSSHSESESRSHSDDEGSTGDGGIGDSDDDRALTGSEGPSFQDIKEI 278

Query: 1339 TIRRSKLAKWFMEPFFDELIVGCFVRVGIGKSRSGPIYRLCRVRNVDATDPDRQYKLDNK 1160
            TIRRSKLAKWFMEPFF+ELIVGCFVRVGIG+S++GPIYRLC V+NVDA++PDRQYKL+NK
Sbjct: 279  TIRRSKLAKWFMEPFFEELIVGCFVRVGIGRSKTGPIYRLCMVKNVDASEPDRQYKLENK 338

Query: 1159 TTYKYLNVVWGNESSAARWQMAMISDSSPLKEEFDQWVREVERSGGHMPSKQEVLEKRDA 980
            TTYKYLNVVWGNESSAARWQMAM+SDS+PL+EEF QWV+EV+RSGG MP+KQ+VLEK+ A
Sbjct: 339  TTYKYLNVVWGNESSAARWQMAMVSDSAPLEEEFKQWVKEVDRSGGRMPTKQDVLEKKQA 398

Query: 979  IQKTNTFVYSAATVKQMLQEKKSATWRPLNIAAEKDRLRRELEGAKMRDDEVEVERIKAR 800
            IQK  TFVYSAATVKQMLQEKKSA+ RPLN+AAEKDRLRRELE A+ + DE EV+RIKAR
Sbjct: 399  IQKAITFVYSAATVKQMLQEKKSASTRPLNVAAEKDRLRRELEIAQSKHDEAEVDRIKAR 458

Query: 799  LQELEVSRQTQEKDSKAIRLAEMNKRNRVENFKNASEKKPVNTGLKAGEAGYDPFSRRWT 620
            LQELE SR  ++KD+KA++LAEMN++NR ENFKNASE KPVNTGLKAGEAGYDPFSRRWT
Sbjct: 459  LQELEASRHAKQKDAKALKLAEMNRKNRFENFKNASELKPVNTGLKAGEAGYDPFSRRWT 518

Query: 619  RSRNYYQSNPGGGEEAGDTNGDVSAALEVANSNG-GVPVXXXXXXXXXXXXXXXXXXXXX 443
            RSRNYY      GE+A   N  V+  +    +N  G PV                     
Sbjct: 519  RSRNYYT-----GEKAAAGNNSVNGIVAGPGTNSTGAPVTAEAGLVATAAALEAAADAGK 573

Query: 442  LVDTRAPV 419
            LVDT APV
Sbjct: 574  LVDTSAPV 581



 Score = 79.7 bits (195), Expect(2) = e-158
 Identities = 38/45 (84%), Positives = 43/45 (95%)
 Frame = -2

Query: 378 GAQAGFMARKQRLEATVGCKVPENDGRRHALTLTVSDYKRRRGLL 244
           GAQAGFMARKQR+E+TVG +V ENDGRRH+LTL+VSDYKRRRGLL
Sbjct: 610 GAQAGFMARKQRIESTVGFRVLENDGRRHSLTLSVSDYKRRRGLL 654


>ref|XP_010241126.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Nelumbo
            nucifera]
          Length = 666

 Score =  501 bits (1291), Expect(2) = e-157
 Identities = 282/488 (57%), Positives = 333/488 (68%), Gaps = 26/488 (5%)
 Frame = -1

Query: 1804 DDDSVGSDLYKDEDDREKLSKLTELEREMILEARATKRSDRDLTEKLKKRKGQDR----K 1637
            DD  VGSDLYKD+ DRE+L+ ++EL+RE IL  RATK+ D+ L E ++ R+G  +    K
Sbjct: 106  DDSDVGSDLYKDDRDREELANMSELQREFILSERATKKDDKRLQEAVRARQGGKKTDIMK 165

Query: 1636 GSQPTPPTRSSMR---SKAQRAGALDELV-------------KXXXXXXXXXXXXRYSPV 1505
             + P+   RSS R     A +  AL+EL              K              SPV
Sbjct: 166  ETPPSVRVRSSSRYADKLAAKDDALNELRNKRRNKQDPEGHRKLRDSGRGGLGARGGSPV 225

Query: 1504 KRRSFATA---TFNXXXXXXXXXXXXXXXXXXXXGMADSDDEKMSESK-TPTFEDIKEIT 1337
            +RRS  TA   + +                     + DSDD++    K  PTFE+IK IT
Sbjct: 226  RRRSILTAASPSSSSQSDSQSGSHSRDDGSTGDGDLGDSDDDRHGAGKEVPTFEEIKSIT 285

Query: 1336 IRRSKLAKWFMEPFFDELIVGCFVRVGIGKSRSGP-IYRLCRVRNVDATDPDRQYKLDNK 1160
            IRRSKLAKWFMEPFF+ELIVGCFVRVGIG SRSG  IYRLC V+NVDATDP++QYKL+N+
Sbjct: 286  IRRSKLAKWFMEPFFEELIVGCFVRVGIGMSRSGQSIYRLCMVKNVDATDPNKQYKLENR 345

Query: 1159 TTYKYLNVVWGNESSAARWQMAMISDSSPLKEEFDQWVREVERSGGHMPSKQEVLEKRDA 980
            TTYKYLN +WGNESSAARWQMA +SDS+PL EEF+ W+REVER GG MP+KQ+V EKR+A
Sbjct: 346  TTYKYLNCIWGNESSAARWQMARVSDSAPLVEEFNDWLREVERHGGRMPTKQDVSEKREA 405

Query: 979  IQKTNTFVYSAATVKQMLQEKKSATWRPLNIAAEKDRLRRELEGAKMRDDEVEVERIKAR 800
            IQKTNTFVYSAATVKQMLQEKK+A+ RPLNIAAEK+RLRRE+E A+ R DE EVERI+AR
Sbjct: 406  IQKTNTFVYSAATVKQMLQEKKTASSRPLNIAAEKERLRREMEVAESRRDEAEVERIRAR 465

Query: 799  LQELE-VSRQTQEKDSKAIRLAEMNKRNRVENFKNASEKKPVNTGLKAGEAGYDPFSRRW 623
            LQELE +SRQ +EKDSKA+RLAEMNKRNR ENFKNASE KPVNT LKAGEAGYDPFSRRW
Sbjct: 466  LQELEAMSRQAKEKDSKAVRLAEMNKRNRAENFKNASELKPVNTSLKAGEAGYDPFSRRW 525

Query: 622  TRSRNYYQSNPGGGEEAGDTNGDVSAALEVANSNGGVPVXXXXXXXXXXXXXXXXXXXXX 443
            TRSRNYY S PG G    +    V++A+ VA+S  G                        
Sbjct: 526  TRSRNYYVSKPGEGAPTANGEAAVASAVSVASSGTGARAAAEAGIAATAAALEAAAGAGK 585

Query: 442  LVDTRAPV 419
            LVDT APV
Sbjct: 586  LVDTSAPV 593



 Score = 84.0 bits (206), Expect(2) = e-157
 Identities = 38/45 (84%), Positives = 42/45 (93%)
 Frame = -2

Query: 378 GAQAGFMARKQRLEATVGCKVPENDGRRHALTLTVSDYKRRRGLL 244
           GA  GF+ RKQR+EATVGC+VPENDGRRH+LTLTVSDYKRRRGLL
Sbjct: 622 GAHLGFLGRKQRIEATVGCRVPENDGRRHSLTLTVSDYKRRRGLL 666


>ref|XP_004505022.1| PREDICTED: protein RTF1 homolog [Cicer arietinum]
            gi|502142571|ref|XP_004505023.1| PREDICTED: protein RTF1
            homolog [Cicer arietinum]
          Length = 658

 Score =  502 bits (1293), Expect(2) = e-156
 Identities = 278/488 (56%), Positives = 343/488 (70%), Gaps = 25/488 (5%)
 Frame = -1

Query: 1807 SDDDSVGSDLYKDEDDREKLSKLTELEREMILEARATKRSDRDLTEKL--KKRKGQDRKG 1634
            SD+ ++G DLYKDEDDR KLS+++EL+REMIL  RA+K+ D+ L  K+  K+ KG+    
Sbjct: 100  SDESNIGDDLYKDEDDRRKLSEMSELQREMILSDRASKKDDKSLLGKIASKREKGKAIMT 159

Query: 1633 SQPTPPTRSS-MRSKAQRAG------ALDELV------------KXXXXXXXXXXXXRYS 1511
             + +PP  SS MR+ A+ A       AL+EL             +            R+S
Sbjct: 160  GKQSPPLSSSRMRASARSADRSAKNVALNELRAKRLKQQDPEARRRLREASRNSGPRRFS 219

Query: 1510 PVKRRSFATATFNXXXXXXXXXXXXXXXXXXXXG--MADSDDEK-MSESKTPTFEDIKEI 1340
            P KR+SF +A  +                       +ADSDD++ +S S+ P+F+DIKEI
Sbjct: 220  PPKRKSFTSANLSSSSHSDSDSRSHSDDEGSTGDGGIADSDDDRALSGSEGPSFQDIKEI 279

Query: 1339 TIRRSKLAKWFMEPFFDELIVGCFVRVGIGKSRSGPIYRLCRVRNVDATDPDRQYKLDNK 1160
            TIRRSKLAKWFMEPFF+ELIVGCFVRVGIG+S++GPIYRLC V+NVD++DPDRQYKL+N+
Sbjct: 280  TIRRSKLAKWFMEPFFEELIVGCFVRVGIGRSKTGPIYRLCMVKNVDSSDPDRQYKLENR 339

Query: 1159 TTYKYLNVVWGNESSAARWQMAMISDSSPLKEEFDQWVREVERSGGHMPSKQEVLEKRDA 980
            TT+KYLNVVWGNESSAARWQMAM+SDS PL+EEF QWV+EVERSGG MP+KQ+VLEK+ A
Sbjct: 340  TTHKYLNVVWGNESSAARWQMAMVSDSFPLEEEFKQWVKEVERSGGRMPTKQDVLEKKQA 399

Query: 979  IQKTNTFVYSAATVKQMLQEKKSATWRPLNIAAEKDRLRRELEGAKMRDDEVEVERIKAR 800
            IQK  TFVYSA TVKQMLQEKKS++ RPLN+AAEKDRLRRE+E A+ ++DE EVERIK R
Sbjct: 400  IQKIITFVYSADTVKQMLQEKKSSSSRPLNVAAEKDRLRREMEIAQSKNDEAEVERIKTR 459

Query: 799  LQELEVSRQTQEKDSKAIRLAEMNKRNRVENFKNASEKKPVNTGLKAGEAGYDPFSRRWT 620
            +QELE SR  + KD+KA++LAEMN++NR ENFKNASE +PVN GLKAGEAGYDPFSRRWT
Sbjct: 460  VQELEASRHAKVKDAKALKLAEMNRKNRFENFKNASELRPVNIGLKAGEAGYDPFSRRWT 519

Query: 619  RSRNYYQSNPGGGEEAGDTNGDVSAALEVANSN-GGVPVXXXXXXXXXXXXXXXXXXXXX 443
            RSRNYY + P  GE+A       +  +  A SN  GVPV                     
Sbjct: 520  RSRNYYVAKP--GEKAAARKNTTNVLVADAGSNITGVPVTAESGVVATAAALEAAADAGK 577

Query: 442  LVDTRAPV 419
            LVDT APV
Sbjct: 578  LVDTSAPV 585



 Score = 79.7 bits (195), Expect(2) = e-156
 Identities = 38/45 (84%), Positives = 41/45 (91%)
 Frame = -2

Query: 378 GAQAGFMARKQRLEATVGCKVPENDGRRHALTLTVSDYKRRRGLL 244
           GAQAGFMARKQR+EATVG +V ENDGRRH LTL+V DYKRRRGLL
Sbjct: 614 GAQAGFMARKQRMEATVGFRVSENDGRRHVLTLSVGDYKRRRGLL 658


>ref|XP_009623037.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Nicotiana
            tomentosiformis]
          Length = 654

 Score =  557 bits (1435), Expect = e-155
 Identities = 297/457 (64%), Positives = 346/457 (75%), Gaps = 24/457 (5%)
 Frame = -1

Query: 1816 ERDSDDDSVGSDLYKDEDDREKLSKLTELEREMILEARATKRSDRDLTEKLK---KRKGQ 1646
            ERDSDDDS+GSDLYKDE+DR+KL+++TEL+REMIL  RA+K+SDR L EK+    K + Q
Sbjct: 95   ERDSDDDSIGSDLYKDEEDRQKLAQMTELDREMILTDRASKKSDRSLQEKISGKIKNRSQ 154

Query: 1645 DRKGSQPTPPTRSSMRSK-------AQRAGALDELV-------------KXXXXXXXXXX 1526
             RK S P   +R  MRS        A R  AL+E+              K          
Sbjct: 155  PRKPSSPPSHSRG-MRSSTRALDRAADRDDALNEIRAKRARQQDPEGNWKLRDAGRKGSG 213

Query: 1525 XXRYSPVKRRSFATATF-NXXXXXXXXXXXXXXXXXXXXGMADSDDEKMSESKTPTFEDI 1349
               YSPVKRRSF  A   +                    GM DSDD+K  ES+ PTFEDI
Sbjct: 214  GRGYSPVKRRSFTAAALGSSPTRGESDSRSNEGDSSGDDGMDDSDDDKSPESQLPTFEDI 273

Query: 1348 KEITIRRSKLAKWFMEPFFDELIVGCFVRVGIGKSRSGPIYRLCRVRNVDATDPDRQYKL 1169
            KEITIRRSKLAKWFMEPFFDELIVGCFVRVGIG+SRSGPIYRLC VRNVDATDP+RQYKL
Sbjct: 274  KEITIRRSKLAKWFMEPFFDELIVGCFVRVGIGRSRSGPIYRLCIVRNVDATDPNRQYKL 333

Query: 1168 DNKTTYKYLNVVWGNESSAARWQMAMISDSSPLKEEFDQWVREVERSGGHMPSKQEVLEK 989
            +NKTT+K+LN+VWGN+SSAARWQMAM+SDS PL++EFDQWV+EVERSGG MPSKQ+VLEK
Sbjct: 334  ENKTTFKFLNLVWGNDSSAARWQMAMVSDSPPLRDEFDQWVKEVERSGGRMPSKQDVLEK 393

Query: 988  RDAIQKTNTFVYSAATVKQMLQEKKSATWRPLNIAAEKDRLRRELEGAKMRDDEVEVERI 809
            ++AIQK+NTFVYSA TVKQMLQ+KKSATWRPLN+AAEKDRLRRE+E AKM++DE EVE+I
Sbjct: 394  KEAIQKSNTFVYSADTVKQMLQQKKSATWRPLNVAAEKDRLRREMEVAKMKNDEAEVEKI 453

Query: 808  KARLQELEVSRQTQEKDSKAIRLAEMNKRNRVENFKNASEKKPVNTGLKAGEAGYDPFSR 629
            KARLQELE SR+ QEKD KA RLAEMN++NRVENFKNASE +PVN  LKAGEAGYDPFSR
Sbjct: 454  KARLQELEASRKAQEKDDKARRLAEMNRKNRVENFKNASELRPVNQLLKAGEAGYDPFSR 513

Query: 628  RWTRSRNYYQSNPGGGEEAGDTNGDVSAALEVANSNG 518
            RWTRS NY+  +     E G +NG+ +AAL V ++NG
Sbjct: 514  RWTRSTNYFAKSANEAAE-GASNGEAAAALAVVDNNG 549



 Score = 89.0 bits (219), Expect = 1e-14
 Identities = 41/45 (91%), Positives = 45/45 (100%)
 Frame = -2

Query: 378 GAQAGFMARKQRLEATVGCKVPENDGRRHALTLTVSDYKRRRGLL 244
           G+QAGFMARKQR+EATVGC+VPENDGRRHALTL+VSDYKRRRGLL
Sbjct: 610 GSQAGFMARKQRIEATVGCRVPENDGRRHALTLSVSDYKRRRGLL 654


>ref|XP_009799534.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Nicotiana
            sylvestris]
          Length = 654

 Score =  554 bits (1428), Expect = e-155
 Identities = 295/457 (64%), Positives = 345/457 (75%), Gaps = 24/457 (5%)
 Frame = -1

Query: 1816 ERDSDDDSVGSDLYKDEDDREKLSKLTELEREMILEARATKRSDRDLTEKLK---KRKGQ 1646
            ERDSDDDS+GSDLYKDE+DR+KL++++EL+REMIL  RA+K+SDR L EK+    K + Q
Sbjct: 95   ERDSDDDSIGSDLYKDEEDRQKLAQMSELDREMILTDRASKKSDRSLQEKISGKIKNRSQ 154

Query: 1645 DRKGSQPTPPTRSSMRSK-------AQRAGALDELV-------------KXXXXXXXXXX 1526
             RK S P   +R  MRS        A R  AL+E+              K          
Sbjct: 155  PRKPSSPPSHSRG-MRSSTRALDRAADRDDALNEIRAKRARQQDPEGNWKLRDAGRKGSG 213

Query: 1525 XXRYSPVKRRSFATATF-NXXXXXXXXXXXXXXXXXXXXGMADSDDEKMSESKTPTFEDI 1349
               YSPVKRRSF  A   +                    GM DSDD+K  ES+ PTFEDI
Sbjct: 214  GRGYSPVKRRSFTAAALGSSPTRGESDSRSNEGDSSGDDGMDDSDDDKSPESQLPTFEDI 273

Query: 1348 KEITIRRSKLAKWFMEPFFDELIVGCFVRVGIGKSRSGPIYRLCRVRNVDATDPDRQYKL 1169
            KEITIRRSKLAKWFMEPFFDELIVGCFVRVGIG+SRSGPIYRLC VRNVDATDP+RQYKL
Sbjct: 274  KEITIRRSKLAKWFMEPFFDELIVGCFVRVGIGRSRSGPIYRLCIVRNVDATDPNRQYKL 333

Query: 1168 DNKTTYKYLNVVWGNESSAARWQMAMISDSSPLKEEFDQWVREVERSGGHMPSKQEVLEK 989
            +NKTT+K+LN++WGN+SSAARWQMAM+SDS PL++EFDQWV+EVERSGG MPSKQ+VLEK
Sbjct: 334  ENKTTFKFLNLIWGNDSSAARWQMAMVSDSPPLRDEFDQWVKEVERSGGRMPSKQDVLEK 393

Query: 988  RDAIQKTNTFVYSAATVKQMLQEKKSATWRPLNIAAEKDRLRRELEGAKMRDDEVEVERI 809
            ++AIQK+NTFVYSA TVKQMLQ+KKSATWRPLN+AAEKDRLRRE+E AKM++DE EVERI
Sbjct: 394  KEAIQKSNTFVYSADTVKQMLQQKKSATWRPLNVAAEKDRLRREMEVAKMKNDEAEVERI 453

Query: 808  KARLQELEVSRQTQEKDSKAIRLAEMNKRNRVENFKNASEKKPVNTGLKAGEAGYDPFSR 629
            KARLQELE SR+ QEKD KA RLAEMN++NRVENFKNASE +PVN  LKAGEAGYDPFSR
Sbjct: 454  KARLQELEASRKAQEKDDKARRLAEMNRKNRVENFKNASELRPVNQLLKAGEAGYDPFSR 513

Query: 628  RWTRSRNYYQSNPGGGEEAGDTNGDVSAALEVANSNG 518
            RWTRS NY+ +        G +NG+ +AAL V ++NG
Sbjct: 514  RWTRSTNYF-AKSANEAAVGASNGEAAAALAVVDNNG 549



 Score = 87.4 bits (215), Expect = 3e-14
 Identities = 40/45 (88%), Positives = 45/45 (100%)
 Frame = -2

Query: 378 GAQAGFMARKQRLEATVGCKVPENDGRRHALTLTVSDYKRRRGLL 244
           G+QAGF+ARKQR+EATVGC+VPENDGRRHALTL+VSDYKRRRGLL
Sbjct: 610 GSQAGFIARKQRIEATVGCRVPENDGRRHALTLSVSDYKRRRGLL 654


>emb|CDO99584.1| unnamed protein product [Coffea canephora]
          Length = 631

 Score =  552 bits (1422), Expect = e-154
 Identities = 300/454 (66%), Positives = 336/454 (74%), Gaps = 21/454 (4%)
 Frame = -1

Query: 1816 ERDSDDDSVGSDLYKDEDDREKLSKLTELEREMILEARATKRSDRDLTEKLKKRKGQDRK 1637
            E DSDDDSVGSDLYKDEDDR+KL++++EL+REMIL  RA+ RSDR++ EK  K+    RK
Sbjct: 83   EGDSDDDSVGSDLYKDEDDRKKLAQMSELQREMILADRASTRSDREMHEKFAKK----RK 138

Query: 1636 GSQPTPPTRSSMRSK---AQRAGALDELV-----------------KXXXXXXXXXXXXR 1517
            GS PT     ++RS    A R  A D+ +                 K             
Sbjct: 139  GS-PTQTHSRAVRSSTRFADRTAAKDDALNEIRAKRMRQQDPEAHRKLRDATRDGSGSRG 197

Query: 1516 YSPVKRRSFATATFNXXXXXXXXXXXXXXXXXXXXGMADSDDEKMS-ESKTPTFEDIKEI 1340
            YSPVKRR F  AT                      GMADSD++K S ESK PT+EDIKEI
Sbjct: 198  YSPVKRRPFTAATIGSPTRSGSASHSDEEESTGDGGMADSDEDKTSAESKWPTYEDIKEI 257

Query: 1339 TIRRSKLAKWFMEPFFDELIVGCFVRVGIGKSRSGPIYRLCRVRNVDATDPDRQYKLDNK 1160
            TIRRSKLAKWFMEPFF++LIVGCFVRVGIGK+R GPIYRLC VRNVD +DPDR YKLDNK
Sbjct: 258  TIRRSKLAKWFMEPFFEDLIVGCFVRVGIGKNRYGPIYRLCVVRNVDGSDPDRLYKLDNK 317

Query: 1159 TTYKYLNVVWGNESSAARWQMAMISDSSPLKEEFDQWVREVERSGGHMPSKQEVLEKRDA 980
            TTYKYLNVVWGNE+SAARWQMAMISDS P KEE+DQWVREVERSGG MPSK EVLEK++A
Sbjct: 318  TTYKYLNVVWGNENSAARWQMAMISDSPPAKEEYDQWVREVERSGGRMPSKLEVLEKKEA 377

Query: 979  IQKTNTFVYSAATVKQMLQEKKSATWRPLNIAAEKDRLRRELEGAKMRDDEVEVERIKAR 800
            IQKTN+FVYSA TVKQMLQEKKSATWRPLN+AAEKDRLR E+E AK+ +DE+EVERIKAR
Sbjct: 378  IQKTNSFVYSAETVKQMLQEKKSATWRPLNVAAEKDRLRTEMEVAKINNDELEVERIKAR 437

Query: 799  LQELEVSRQTQEKDSKAIRLAEMNKRNRVENFKNASEKKPVNTGLKAGEAGYDPFSRRWT 620
            LQELE SRQ  E D KAIRLAEMN++NRVENFKNAS  KPVN  LKAGEAGYDPFSRRWT
Sbjct: 438  LQELEASRQAHEMDKKAIRLAEMNRKNRVENFKNASGLKPVNASLKAGEAGYDPFSRRWT 497

Query: 619  RSRNYYQSNPGGGEEAGDTNGDVSAALEVANSNG 518
            RSRNYY  NP  G EA   +G+ +AA  V N NG
Sbjct: 498  RSRNYYVKNPIDG-EATAADGEATAASAVNNRNG 530



 Score = 89.4 bits (220), Expect = 9e-15
 Identities = 42/45 (93%), Positives = 44/45 (97%)
 Frame = -2

Query: 378 GAQAGFMARKQRLEATVGCKVPENDGRRHALTLTVSDYKRRRGLL 244
           GAQAGFMARKQR+EATVGC+VPENDGRRHALTLTVSDYKRR GLL
Sbjct: 587 GAQAGFMARKQRIEATVGCRVPENDGRRHALTLTVSDYKRRMGLL 631


>gb|KEH31113.1| RNA polymerase-associated RTF1-like protein [Medicago truncatula]
          Length = 655

 Score =  493 bits (1270), Expect(2) = e-153
 Identities = 276/488 (56%), Positives = 341/488 (69%), Gaps = 25/488 (5%)
 Frame = -1

Query: 1807 SDDDSVGSDLYKDEDDREKLSKLTELEREMILEARATKRSDRDLTEKL--KKRKGQDRKG 1634
            SD+ ++G DLYKDEDDR KLS+++EL+REMIL  RA+K+ D+ L  K+  K+ KG+    
Sbjct: 98   SDESNIGDDLYKDEDDRRKLSEMSELQREMILSDRASKKDDKSLLGKIASKREKGKAIMT 157

Query: 1633 SQPTPPTRSS-MRSKAQRAG------ALDELV------------KXXXXXXXXXXXXRYS 1511
             + +PP  SS MR+ A+ A       AL+EL             +             +S
Sbjct: 158  GKQSPPLSSSRMRASARSADRSAKNEALNELRAKRLKQQDPEAHRRLREASRSSGPRNFS 217

Query: 1510 PVKRRSFATATFNXXXXXXXXXXXXXXXXXXXXG--MADSDDEK-MSESKTPTFEDIKEI 1340
            P KR+SF +A  +                       +ADSDD++ +S S+  +F+DIKEI
Sbjct: 218  PPKRKSFTSANLSSSSHSDSESRSHSDDEGSTGDGGIADSDDDRALSGSEGLSFQDIKEI 277

Query: 1339 TIRRSKLAKWFMEPFFDELIVGCFVRVGIGKSRSGPIYRLCRVRNVDATDPDRQYKLDNK 1160
            TIRRSKLAKWFMEPFF+ELIVGCFVRVGIG+S++GPIYRLC V+NVD++DPDRQYKL+NK
Sbjct: 278  TIRRSKLAKWFMEPFFEELIVGCFVRVGIGRSKTGPIYRLCMVKNVDSSDPDRQYKLENK 337

Query: 1159 TTYKYLNVVWGNESSAARWQMAMISDSSPLKEEFDQWVREVERSGGHMPSKQEVLEKRDA 980
            TTYKYLNVVWGNESSAARWQMAMISDS PL+EE+ QWV+EVERSGG MPSKQ+VL+K+ A
Sbjct: 338  TTYKYLNVVWGNESSAARWQMAMISDSPPLEEEYKQWVKEVERSGGRMPSKQDVLDKKQA 397

Query: 979  IQKTNTFVYSAATVKQMLQEKKSATWRPLNIAAEKDRLRRELEGAKMRDDEVEVERIKAR 800
            I K  TFVYSAATVKQM+QEKKSA+ RPLNIAAEKDRLR +LE A+ ++D+ EVERIKAR
Sbjct: 398  INKIITFVYSAATVKQMIQEKKSASSRPLNIAAEKDRLRSDLERAQGKNDDAEVERIKAR 457

Query: 799  LQELEVSRQTQEKDSKAIRLAEMNKRNRVENFKNASEKKPVNTGLKAGEAGYDPFSRRWT 620
            L ELE SR  + KD+KA++LAEMN++NRVENFKNASE +P+ TGLK G+AGYDPFSRRWT
Sbjct: 458  LLELEASRHAKVKDAKALKLAEMNRKNRVENFKNASELRPL-TGLKEGDAGYDPFSRRWT 516

Query: 619  RSRNYYQSNPGGGEEAGDTNGDVSAALEVANSNG-GVPVXXXXXXXXXXXXXXXXXXXXX 443
            RSRNYY + P   E+A   N +    +  A +NG GVPV                     
Sbjct: 517  RSRNYYVATP--SEKAAALNNNTVGLVSDAGANGTGVPVTAESGAVATAIALEAAADAGK 574

Query: 442  LVDTRAPV 419
            LVDT APV
Sbjct: 575  LVDTSAPV 582



 Score = 78.6 bits (192), Expect(2) = e-153
 Identities = 37/45 (82%), Positives = 41/45 (91%)
 Frame = -2

Query: 378 GAQAGFMARKQRLEATVGCKVPENDGRRHALTLTVSDYKRRRGLL 244
           GAQAGFMARKQR+E+TVG K+ ENDGRRH LTL+V DYKRRRGLL
Sbjct: 611 GAQAGFMARKQRIESTVGFKLSENDGRRHVLTLSVGDYKRRRGLL 655


>ref|XP_004232840.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Solanum
            lycopersicum]
          Length = 645

 Score =  542 bits (1396), Expect = e-151
 Identities = 293/454 (64%), Positives = 339/454 (74%), Gaps = 23/454 (5%)
 Frame = -1

Query: 1810 DSDDDSVGSDLYKDEDDREKLSKLTELEREMILEARATKRSDRDLTEKLKKRKGQDRKGS 1631
            +SDDDS+GSDLYKD+DDR+KL+++TELEREMIL  RA K+SDR L +K+ K + Q RK S
Sbjct: 94   ESDDDSIGSDLYKDDDDRQKLAQMTELEREMILTDRAAKKSDRSLHDKMIKDRAQPRKQS 153

Query: 1630 QPTPPTRSSMRSK-------AQRAGALDEL--------------VKXXXXXXXXXXXXRY 1514
             P   +R  MRS        A R  AL+E+               K             Y
Sbjct: 154  SPPSHSRG-MRSSTRALDRAADRDDALNEIRAKRARQQQDPEGQFKLRDAARKGSGSRGY 212

Query: 1513 SPVKRRSFATATF-NXXXXXXXXXXXXXXXXXXXXGMADSDDEKMS-ESKTPTFEDIKEI 1340
            SP+KRRSF  A+  +                    GM DSDD+K S ES+ PTFEDIKEI
Sbjct: 213  SPIKRRSFTAASLGSSPTRGESDSHSNEGDSSADDGMDDSDDDKSSPESQLPTFEDIKEI 272

Query: 1339 TIRRSKLAKWFMEPFFDELIVGCFVRVGIGKSRSGPIYRLCRVRNVDATDPDRQYKLDNK 1160
            +IRRSKLAKWFMEPFFDELIVGCFVRVGIG+SRSGPIYRLC VRNVDA+DP+RQYKL+NK
Sbjct: 273  SIRRSKLAKWFMEPFFDELIVGCFVRVGIGRSRSGPIYRLCVVRNVDASDPNRQYKLENK 332

Query: 1159 TTYKYLNVVWGNESSAARWQMAMISDSSPLKEEFDQWVREVERSGGHMPSKQEVLEKRDA 980
            TT K+LNVVWGNE+SAARWQMAMISDS PL++EFDQWVREVERSGG MPSKQ+VLEK++A
Sbjct: 333  TTSKFLNVVWGNENSAARWQMAMISDSPPLRDEFDQWVREVERSGGRMPSKQDVLEKKEA 392

Query: 979  IQKTNTFVYSAATVKQMLQEKKSATWRPLNIAAEKDRLRRELEGAKMRDDEVEVERIKAR 800
            IQK+NTFVYSA TVKQMLQ+KKSATWRPLN+AAEKDRLRR++E AKM++DE EVERIKAR
Sbjct: 393  IQKSNTFVYSADTVKQMLQQKKSATWRPLNVAAEKDRLRRDMEVAKMKNDEAEVERIKAR 452

Query: 799  LQELEVSRQTQEKDSKAIRLAEMNKRNRVENFKNASEKKPVNTGLKAGEAGYDPFSRRWT 620
            LQELE SR+ QEKD KA RLAEMN++NRVENFKNASE +PVN  LKAGEAGYDPFSRRWT
Sbjct: 453  LQELEDSRKVQEKDDKARRLAEMNRKNRVENFKNASELRPVNQLLKAGEAGYDPFSRRWT 512

Query: 619  RSRNYYQSNPGGGEEAGDTNGDVSAALEVANSNG 518
            RS NY+      GE A       +AAL   ++NG
Sbjct: 513  RSTNYFAKGASNGEAA------AAAALAAEDNNG 540



 Score = 87.8 bits (216), Expect = 3e-14
 Identities = 41/45 (91%), Positives = 43/45 (95%)
 Frame = -2

Query: 378 GAQAGFMARKQRLEATVGCKVPENDGRRHALTLTVSDYKRRRGLL 244
           G QAGFMARKQR+EATVGC VPENDGRRHALTL+VSDYKRRRGLL
Sbjct: 601 GGQAGFMARKQRIEATVGCSVPENDGRRHALTLSVSDYKRRRGLL 645


>ref|XP_004493842.1| PREDICTED: protein RTF1 homolog [Cicer arietinum]
            gi|502110282|ref|XP_004493843.1| PREDICTED: protein RTF1
            homolog [Cicer arietinum]
          Length = 653

 Score =  492 bits (1267), Expect(2) = e-151
 Identities = 281/497 (56%), Positives = 336/497 (67%), Gaps = 31/497 (6%)
 Frame = -1

Query: 1816 ERDSDDDS-VGSDLYKDEDDREKLSKLTELEREMILEARATKRSDRDLTEKL--KKRKGQ 1646
            E DS +DS VG DLYKDEDDR+KLS++TEL+REMIL  RA+K+ D+D   K+  K+ KG 
Sbjct: 86   EGDSSEDSDVGDDLYKDEDDRQKLSEMTELQREMILSDRASKKDDKDFLGKIASKREKGA 145

Query: 1645 ----DRKGSQPTPPTRSSMRSKAQRA-------GALDEL-----------VKXXXXXXXX 1532
                 R+ S P P   S +R+ A+ A       GAL+EL            K        
Sbjct: 146  KATLSRRESPPPPLLSSRVRASARSADRSAAKDGALNELRAKRLKQLDPEAKLKLKEGSK 205

Query: 1531 XXXXRYSPVKRRSFATA--TFNXXXXXXXXXXXXXXXXXXXXGMADSDDEKM---SESKT 1367
                    +K + FA+   + +                    G+ DSDD+++   S  + 
Sbjct: 206  SGGRGLFSLKGKPFASTGLSSSSHSDSDSRSRSDDEGSNGDGGIIDSDDDRIMTGSGFEV 265

Query: 1366 PTFEDIKEITIRRSKLAKWFMEPFFDELIVGCFVRVGIGKSRSGPIYRLCRVRNVDATDP 1187
            P+FEDIKEITIRRSKLAKWFMEPFF+ELIVGCFVRVGIG+S++GPIYRLC V+NVDA+DP
Sbjct: 266  PSFEDIKEITIRRSKLAKWFMEPFFEELIVGCFVRVGIGRSKTGPIYRLCMVKNVDASDP 325

Query: 1186 DRQYKLDNKTTYKYLNVVWGNESSAARWQMAMISDSSPLKEEFDQWVREVERSGGHMPSK 1007
            DRQYKLDNKTTYKYLNVVWGNE+SAARWQMAM+SDS PL+EEF QWV+EVERSGG M  K
Sbjct: 326  DRQYKLDNKTTYKYLNVVWGNETSAARWQMAMVSDSPPLEEEFKQWVKEVERSGGRMLMK 385

Query: 1006 QEVLEKRDAIQKTNTFVYSAATVKQMLQEKKSATWRPLNIAAEKDRLRRELEGAKMRDDE 827
             +V+EK  AIQK N+FVYSAATVKQM++EKKS + RPLN+AAEKDRL+R+LE A+ + D 
Sbjct: 386  LDVMEKNQAIQKINSFVYSAATVKQMIEEKKSNSRRPLNVAAEKDRLKRQLEIAESKKDA 445

Query: 826  VEVERIKARLQELEVSRQTQEKDSKAIRLAEMNKRNRVENFKNASEKKPVNTGLKAGEAG 647
             EVE+IK RLQELE SR+TQ KD+KA+RL+EMN++NR ENFKNASE KPVN GLKAGEAG
Sbjct: 446  AEVEKIKTRLQELEASRKTQAKDAKALRLSEMNRKNRFENFKNASELKPVNKGLKAGEAG 505

Query: 646  YDPFSRRWTRSRNYYQSNPGGGEEAGDTNGDVSAALEVANSNG-GVPVXXXXXXXXXXXX 470
            YDPFSRRWTRSRNYY  N    EEA   N     A+    SNG G  V            
Sbjct: 506  YDPFSRRWTRSRNYY--NAKQAEEAAAGNNSSGGAVGDRGSNGVGATVAGEAGVVATAEA 563

Query: 469  XXXXXXXXXLVDTRAPV 419
                     LVDTRAPV
Sbjct: 564  LEAAADAGKLVDTRAPV 580



 Score = 71.6 bits (174), Expect(2) = e-151
 Identities = 33/45 (73%), Positives = 38/45 (84%)
 Frame = -2

Query: 378 GAQAGFMARKQRLEATVGCKVPENDGRRHALTLTVSDYKRRRGLL 244
           G  AGF+A+KQR+E  VG +VPENDG+ H LTLTVSDYKRRRGLL
Sbjct: 609 GVHAGFIAKKQRIEEIVGFRVPENDGKSHMLTLTVSDYKRRRGLL 653


>gb|EPS59875.1| hypothetical protein M569_14929 [Genlisea aurea]
          Length = 643

 Score =  536 bits (1382), Expect = e-149
 Identities = 277/433 (63%), Positives = 329/433 (75%), Gaps = 2/433 (0%)
 Frame = -1

Query: 1816 ERDSDDDSVGSDLYKDEDDREKLSKLTELEREMILEARATKRSDRDLTEKLKKRKGQDRK 1637
            ERDSD+D++GSDLYKDE+DREKLSKLTELEREMILE RATK SDRDLTEKLKKRKG D+K
Sbjct: 88   ERDSDNDTIGSDLYKDEEDREKLSKLTELEREMILEGRATKISDRDLTEKLKKRKGHDKK 147

Query: 1636 GSQPTPPTRSSMRSKAQRAGALDELVKXXXXXXXXXXXXR-YSPVKRRSFATATFNXXXX 1460
             S     TRSS RSKA+RAGALDELVK              YSPVKRRSF  AT +    
Sbjct: 148  LSPAKAHTRSSTRSKAERAGALDELVKRRRDAVKGGTTRSRYSPVKRRSFTAATLSSPSH 207

Query: 1459 XXXXXXXXXXXXXXXXGMADSDDEK-MSESKTPTFEDIKEITIRRSKLAKWFMEPFFDEL 1283
                            G+ DSD++K  S+S  PTF+DIKEIT++RSKL KWFMEPFFDEL
Sbjct: 208  SDSRSQSGEGESTGDGGIGDSDEDKTQSQSNVPTFDDIKEITVQRSKLLKWFMEPFFDEL 267

Query: 1282 IVGCFVRVGIGKSRSGPIYRLCRVRNVDATDPDRQYKLDNKTTYKYLNVVWGNESSAARW 1103
            I+GCFV+VGIGKSRSG +YRLC VRNVD++DP R Y  +N+ T+KYL++VWG+ESSAARW
Sbjct: 268  IIGCFVKVGIGKSRSGNVYRLCVVRNVDSSDPSRAYDFENRKTHKYLSLVWGSESSAARW 327

Query: 1102 QMAMISDSSPLKEEFDQWVREVERSGGHMPSKQEVLEKRDAIQKTNTFVYSAATVKQMLQ 923
            QM MIS+ +P +EEFD W +EVER+GG+MP++QEV EKR+A+Q+ N FVYSAATVKQM+Q
Sbjct: 328  QMKMISNEAPKREEFDLWFKEVERTGGNMPTRQEVSEKREALQRINRFVYSAATVKQMVQ 387

Query: 922  EKKSATWRPLNIAAEKDRLRRELEGAKMRDDEVEVERIKARLQELEVSRQTQEKDSKAIR 743
            EKKSAT +P+N+A EKDRLRR +E A+  DD  E++ I+ +L ELE SR+  EKDSKA +
Sbjct: 388  EKKSATHKPINVALEKDRLRRAMEVARENDDHDEMKEIQRKLSELESSRKVPEKDSKAAK 447

Query: 742  LAEMNKRNRVENFKNASEKKPVNTGLKAGEAGYDPFSRRWTRSRNYYQSNPGGGEEAGDT 563
            LAEMN +NR  NFKNASE KPVNT LKAGE GYDPFSRRWTRSRNYY SN   G   G+ 
Sbjct: 448  LAEMNSKNRKANFKNASEMKPVNTSLKAGEVGYDPFSRRWTRSRNYYVSNAATG--IGEA 505

Query: 562  NGDVSAALEVANS 524
            NG  + A   A +
Sbjct: 506  NGSANVASVAATA 518



 Score = 74.3 bits (181), Expect = 3e-10
 Identities = 36/42 (85%), Positives = 37/42 (88%)
 Frame = -2

Query: 378 GAQAGFMARKQRLEATVGCKVPENDGRRHALTLTVSDYKRRR 253
           GAQAG MARKQ +EA  G KVPENDGRRHALTLTVSDYKRRR
Sbjct: 566 GAQAGLMARKQWIEANYGVKVPENDGRRHALTLTVSDYKRRR 607


>ref|XP_002519028.1| RNA polymerase-associated protein RTF1, putative [Ricinus communis]
            gi|223541691|gb|EEF43239.1| RNA polymerase-associated
            protein RTF1, putative [Ricinus communis]
          Length = 660

 Score =  531 bits (1369), Expect = e-148
 Identities = 280/457 (61%), Positives = 340/457 (74%), Gaps = 27/457 (5%)
 Frame = -1

Query: 1816 ERDSDDDS-VGSDLYKDEDDREKLSKLTELEREMILEARATKRSDRDLTEKLKKRKGQDR 1640
            E DS D S VG DLYK+EDDR KL++++ELEREMIL  RA K+ D++LTE+++ ++  +R
Sbjct: 95   EGDSSDGSDVGEDLYKNEDDRRKLAQMSELEREMILSERADKKGDKNLTERIRSKRESER 154

Query: 1639 --KGSQPTPP------TRSSMRSKAQRAGALDELV-----------------KXXXXXXX 1535
              +  + TPP       R+S RS A RA A D+ +                 K       
Sbjct: 155  TTRSRKETPPLPSSRGVRTSARS-ADRAAAKDDALNELKARRLKQQDPEAHRKLRDASRR 213

Query: 1534 XXXXXRYSPVKRRSFATATFNXXXXXXXXXXXXXXXXXXXXG-MADSDDEKMSESKTPTF 1358
                  +SP+KR+ F +A+ +                    G MADSDD+    S+ PTF
Sbjct: 214  GSGSRGFSPIKRKRFTSASLSSSSSESESRSHSEDEGSTGDGGMADSDDDGEPGSQGPTF 273

Query: 1357 EDIKEITIRRSKLAKWFMEPFFDELIVGCFVRVGIGKSRSGPIYRLCRVRNVDATDPDRQ 1178
            +DI+EITIRRSKLAKWFMEP+F+ELIVGCFVRVGIG+S+SGPIYRLC VRNVDA DPDR 
Sbjct: 274  DDIREITIRRSKLAKWFMEPWFEELIVGCFVRVGIGRSKSGPIYRLCLVRNVDAADPDRP 333

Query: 1177 YKLDNKTTYKYLNVVWGNESSAARWQMAMISDSSPLKEEFDQWVREVERSGGHMPSKQEV 998
            YKL+NKTTYKYLNV+WGNESSAARWQMAMISDS+P ++E+ QWVREVERSGG MP+KQ++
Sbjct: 334  YKLENKTTYKYLNVIWGNESSAARWQMAMISDSAPTEDEYKQWVREVERSGGRMPTKQDI 393

Query: 997  LEKRDAIQKTNTFVYSAATVKQMLQEKKSATWRPLNIAAEKDRLRRELEGAKMRDDEVEV 818
            LEK++AI+K+NTFVYSAATVKQMLQEKKSA+ RPLN+AAEKDRLRRELE A+ + D+ EV
Sbjct: 394  LEKKEAIRKSNTFVYSAATVKQMLQEKKSASSRPLNVAAEKDRLRRELEVAQSKQDDAEV 453

Query: 817  ERIKARLQELEVSRQTQEKDSKAIRLAEMNKRNRVENFKNASEKKPVNTGLKAGEAGYDP 638
            ERI+AR+QELE SRQTQ KD+KAIRLAEMN++NR ENF+NASE KPVNT LKAGEAGYDP
Sbjct: 454  ERIRARIQELEASRQTQGKDAKAIRLAEMNRKNRAENFRNASELKPVNTSLKAGEAGYDP 513

Query: 637  FSRRWTRSRNYYQSNPGGGEEAGDTNGDVSAALEVAN 527
            FSRRWTRSRNYY S P GG+ A  TN + S  + VAN
Sbjct: 514  FSRRWTRSRNYYVSKPAGGDAAAATNNEASGTVAVAN 550



 Score = 82.4 bits (202), Expect = 1e-12
 Identities = 38/45 (84%), Positives = 42/45 (93%)
 Frame = -2

Query: 378 GAQAGFMARKQRLEATVGCKVPENDGRRHALTLTVSDYKRRRGLL 244
           GAQAGFMARKQR+EAT+GC+V END +RH LTLTVSDYKRRRGLL
Sbjct: 616 GAQAGFMARKQRIEATIGCRVSENDEKRHVLTLTVSDYKRRRGLL 660


>ref|XP_010646904.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Vitis
            vinifera]
          Length = 658

 Score =  528 bits (1359), Expect = e-147
 Identities = 285/461 (61%), Positives = 334/461 (72%), Gaps = 28/461 (6%)
 Frame = -1

Query: 1816 ERDSDDDS-VGSDLYKDEDDREKLSKLTELEREMILEARATKRSDRDLTEKLKKRKGQDR 1640
            E DS DDS VGSDLYK+EDDR++L++LTELEREMIL  RATK++D+ L EKL+ ++G+++
Sbjct: 93   EGDSSDDSDVGSDLYKNEDDRQQLAQLTELEREMILTDRATKKTDKKLHEKLRSKRGKEK 152

Query: 1639 KGSQPTPP-------TRSSMRSKAQRAGALDELV-----------------KXXXXXXXX 1532
              S+   P        RSS RS A RA A D+ +                 K        
Sbjct: 153  TQSRKESPPLQLSRGVRSSARS-ADRAAAKDDALNELRAKRLKHQDPEAHRKLRDASRGG 211

Query: 1531 XXXXRYSPVKRRSFATATFNXXXXXXXXXXXXXXXXXXXXG--MADSDDEKMSESKTPTF 1358
                 +SPVKRR+F  A+ +                       M DSDD++   S  PTF
Sbjct: 212  SSNRGFSPVKRRAFTAASLSSSSQSESDGGSRSEDEGSTGDGAMVDSDDDRGIGSDVPTF 271

Query: 1357 EDIKEITIRRSKLAKWFMEPFFDELIVGCFVRVGIGKSRSGPIYRLCRVRNVDATDPDRQ 1178
            EDIK ITIRRSKLAKWFMEPFF+ELIVGCFVRVGIGKSRSGPIYRLC VRNVDA+DPDR 
Sbjct: 272  EDIKSITIRRSKLAKWFMEPFFEELIVGCFVRVGIGKSRSGPIYRLCMVRNVDASDPDRH 331

Query: 1177 YKLDNKTTYKYLNVVWGNESSAARWQMAMISDSSPLKEEFDQWVREVERSGGHMPSKQEV 998
            Y+L+NKTTYKYLN VWGNE+S+ARWQMAM+SDS PL EEF+QWV+EVERSG  M +KQ++
Sbjct: 332  YQLENKTTYKYLNCVWGNENSSARWQMAMVSDSGPLMEEFNQWVKEVERSGSRMLTKQDI 391

Query: 997  LEKRDAIQKTNTFVYSAATVKQMLQEKKSATWRPLNIAAEKDRLRRELEGAKMRDDEVEV 818
            LEKR+AIQKTN FVYSAAT KQMLQEKKS + RPLNI AEKDRLRRE+E A  + D+ EV
Sbjct: 392  LEKREAIQKTNMFVYSAATGKQMLQEKKSVSSRPLNIVAEKDRLRREMEVALSKHDQAEV 451

Query: 817  ERIKARLQELEVSRQTQEKDSKAIRLAEMNKRNRVENFKNASEKKPVNTGLKAGEAGYDP 638
            ERI  RLQ+LE SR+++EKD+KAIRLAEMN++NR ENFKNASE K VNT LKAGEAGYDP
Sbjct: 452  ERINTRLQQLEASRRSKEKDAKAIRLAEMNRKNRAENFKNASESKRVNTSLKAGEAGYDP 511

Query: 637  FSRRWTRSRNYYQSNPGGGEEAGD-TNGDVSAALEVANSNG 518
            FSRRWTRSRNYY S PGGG+EA    NG+  AA   A SNG
Sbjct: 512  FSRRWTRSRNYYVSKPGGGDEAAAVANGEAPAAFVGAGSNG 552



 Score = 87.4 bits (215), Expect = 3e-14
 Identities = 41/45 (91%), Positives = 43/45 (95%)
 Frame = -2

Query: 378 GAQAGFMARKQRLEATVGCKVPENDGRRHALTLTVSDYKRRRGLL 244
           GA AGFMARKQR+EATVGC+VPENDGRRHALTLTV DYKRRRGLL
Sbjct: 614 GALAGFMARKQRIEATVGCRVPENDGRRHALTLTVGDYKRRRGLL 658